View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17966_high_9 (Length: 325)

Name: NF17966_high_9
Description: NF17966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17966_high_9
NF17966_high_9
[»] chr5 (34 HSPs)
chr5 (1-321)||(38816618-38816931)
chr5 (161-290)||(22423764-22423895)
chr5 (135-210)||(19820428-19820503)
chr5 (135-202)||(22013364-22013431)
chr5 (150-209)||(6326332-6326391)
chr5 (135-209)||(42469171-42469245)
chr5 (160-209)||(15410483-15410532)
chr5 (174-258)||(3966492-3966577)
chr5 (174-207)||(6035472-6035505)
chr5 (243-292)||(8420075-8420124)
chr5 (157-210)||(21191090-21191143)
chr5 (238-290)||(9929668-9929720)
chr5 (174-210)||(17123037-17123073)
chr5 (157-201)||(21522722-21522766)
chr5 (157-201)||(21533288-21533332)
chr5 (174-210)||(27144452-27144488)
chr5 (174-258)||(11685928-11686012)
chr5 (167-210)||(14674251-14674294)
chr5 (157-208)||(15382449-15382500)
chr5 (167-210)||(19579683-19579726)
chr5 (167-210)||(34879332-34879375)
chr5 (150-208)||(4105222-4105280)
chr5 (167-209)||(5873548-5873590)
chr5 (262-292)||(24906250-24906280)
chr5 (179-209)||(27932229-27932259)
chr5 (176-210)||(28588708-28588742)
chr5 (157-203)||(36642803-36642849)
chr5 (161-210)||(19552577-19552626)
chr5 (135-209)||(32630770-32630840)
chr5 (183-212)||(32766975-32767004)
chr5 (174-202)||(2436911-2436939)
chr5 (157-209)||(21137661-21137713)
chr5 (174-210)||(31084312-31084348)
chr5 (174-258)||(41995460-41995543)
[»] chr6 (42 HSPs)
chr6 (157-258)||(10294079-10294181)
chr6 (150-210)||(9027143-9027203)
chr6 (157-258)||(16766669-16766771)
chr6 (135-210)||(853893-853968)
chr6 (159-290)||(5732474-5732595)
chr6 (160-290)||(8805524-8805656)
chr6 (159-210)||(9629357-9629408)
chr6 (160-210)||(9658854-9658904)
chr6 (172-210)||(19040339-19040377)
chr6 (157-210)||(5000660-5000713)
chr6 (150-210)||(426548-426608)
chr6 (135-203)||(8365560-8365628)
chr6 (157-258)||(9107355-9107457)
chr6 (137-209)||(12696277-12696348)
chr6 (161-209)||(13851712-13851760)
chr6 (167-210)||(20371144-20371187)
chr6 (135-210)||(30866178-30866253)
chr6 (135-209)||(6389693-6389767)
chr6 (159-209)||(7977865-7977915)
chr6 (169-210)||(7265627-7265668)
chr6 (157-210)||(7938088-7938141)
chr6 (159-253)||(34073337-34073432)
chr6 (135-203)||(3398569-3398637)
chr6 (158-210)||(8777007-8777059)
chr6 (243-290)||(426478-426525)
chr6 (167-210)||(17841623-17841666)
chr6 (158-241)||(31579229-31579311)
chr6 (135-209)||(20518295-20518369)
chr6 (262-292)||(34073276-34073306)
chr6 (249-290)||(2117134-2117175)
chr6 (177-210)||(10842524-10842557)
chr6 (160-254)||(26562664-26562759)
chr6 (157-210)||(34595106-34595159)
chr6 (174-210)||(677826-677862)
chr6 (174-210)||(7996412-7996448)
chr6 (174-210)||(8022353-8022389)
chr6 (174-210)||(10339160-10339196)
chr6 (158-210)||(16833281-16833333)
chr6 (174-210)||(17341698-17341734)
chr6 (177-209)||(21395342-21395374)
chr6 (174-210)||(21424836-21424872)
chr6 (174-258)||(34290064-34290147)
[»] chr7 (36 HSPs)
chr7 (135-209)||(27944991-27945065)
chr7 (150-210)||(11722132-11722192)
chr7 (150-241)||(19206015-19206107)
chr7 (135-209)||(24105629-24105702)
chr7 (178-260)||(29787354-29787435)
chr7 (174-258)||(32308109-32308194)
chr7 (180-290)||(11700798-11700909)
chr7 (148-258)||(24339605-24339716)
chr7 (135-206)||(2034392-2034462)
chr7 (159-210)||(2425767-2425818)
chr7 (168-210)||(8046061-8046103)
chr7 (174-241)||(22484014-22484082)
chr7 (168-210)||(23191879-23191921)
chr7 (160-210)||(26733279-26733329)
chr7 (179-253)||(30731031-30731104)
chr7 (161-210)||(1433430-1433479)
chr7 (177-250)||(11072290-11072362)
chr7 (159-208)||(49107795-49107844)
chr7 (130-290)||(7328639-7328805)
chr7 (174-210)||(20549780-20549816)
chr7 (157-209)||(43249965-43250017)
chr7 (171-210)||(2948669-2948708)
chr7 (174-258)||(6630897-6630982)
chr7 (167-210)||(21828439-21828482)
chr7 (178-209)||(28155563-28155594)
chr7 (135-210)||(43027503-43027578)
chr7 (159-209)||(5235960-5236010)
chr7 (192-258)||(9933282-9933347)
chr7 (168-210)||(20545270-20545312)
chr7 (159-208)||(4017830-4017879)
chr7 (262-291)||(17852091-17852120)
chr7 (174-207)||(25791642-25791675)
chr7 (159-208)||(26329418-26329467)
chr7 (158-210)||(11061110-11061162)
chr7 (262-290)||(15680900-15680928)
chr7 (174-210)||(22868031-22868067)
[»] chr8 (19 HSPs)
chr8 (157-258)||(22651948-22652050)
chr8 (157-258)||(29510289-29510391)
chr8 (135-203)||(25192388-25192456)
chr8 (157-210)||(27213519-27213572)
chr8 (167-210)||(31109552-31109595)
chr8 (144-210)||(926822-926888)
chr8 (158-203)||(126390-126435)
chr8 (177-210)||(39954313-39954346)
chr8 (170-210)||(31236611-31236651)
chr8 (167-243)||(37283812-37283887)
chr8 (135-210)||(13436998-13437073)
chr8 (148-210)||(24362236-24362298)
chr8 (176-210)||(27101506-27101540)
chr8 (168-210)||(34897068-34897110)
chr8 (177-210)||(13844630-13844663)
chr8 (158-210)||(4298920-4298972)
chr8 (158-210)||(4673459-4673511)
chr8 (158-210)||(20873042-20873094)
chr8 (162-258)||(29776013-29776108)
[»] chr1 (36 HSPs)
chr1 (158-210)||(6427323-6427375)
chr1 (157-210)||(398799-398852)
chr1 (157-210)||(40917723-40917776)
chr1 (158-210)||(2896155-2896207)
chr1 (134-209)||(5376535-5376609)
chr1 (149-235)||(1262848-1262933)
chr1 (150-249)||(1486703-1486803)
chr1 (237-290)||(48547938-48547991)
chr1 (143-289)||(10572535-10572690)
chr1 (166-210)||(12443494-12443538)
chr1 (174-210)||(17831565-17831601)
chr1 (174-210)||(36878450-36878486)
chr1 (135-210)||(5927374-5927449)
chr1 (189-292)||(44482234-44482343)
chr1 (160-210)||(9709795-9709845)
chr1 (160-210)||(34298411-34298461)
chr1 (167-250)||(38503302-38503386)
chr1 (174-210)||(19562655-19562691)
chr1 (174-209)||(609493-609528)
chr1 (167-210)||(6415035-6415078)
chr1 (167-210)||(46348417-46348460)
chr1 (148-203)||(48040503-48040558)
chr1 (158-209)||(48450622-48450673)
chr1 (174-208)||(3490426-3490460)
chr1 (176-210)||(10475011-10475045)
chr1 (135-209)||(39130802-39130876)
chr1 (174-212)||(40285686-40285724)
chr1 (157-210)||(20157384-20157437)
chr1 (177-210)||(21530681-21530714)
chr1 (180-258)||(25361881-25361960)
chr1 (180-209)||(41877505-41877534)
chr1 (177-258)||(9828036-9828118)
chr1 (158-210)||(15641064-15641116)
chr1 (167-203)||(18556497-18556533)
chr1 (177-241)||(25452152-25452215)
chr1 (135-195)||(34315663-34315722)
[»] chr2 (31 HSPs)
chr2 (135-246)||(21782817-21782927)
chr2 (135-199)||(33519736-33519800)
chr2 (135-210)||(20539708-20539783)
chr2 (160-210)||(21616737-21616787)
chr2 (157-241)||(4332898-4332981)
chr2 (183-241)||(1327976-1328033)
chr2 (160-258)||(36409614-36409711)
chr2 (135-208)||(19536434-19536507)
chr2 (158-207)||(23717999-23718048)
chr2 (158-207)||(24105671-24105720)
chr2 (177-290)||(19573970-19574078)
chr2 (185-258)||(44860320-44860394)
chr2 (172-260)||(18420417-18420506)
chr2 (243-290)||(19536361-19536408)
chr2 (175-210)||(37411278-37411313)
chr2 (243-289)||(18255945-18255991)
chr2 (157-235)||(18276493-18276570)
chr2 (243-289)||(34691770-34691816)
chr2 (243-289)||(34714182-34714228)
chr2 (168-209)||(21091706-21091747)
chr2 (136-201)||(21624217-21624282)
chr2 (157-210)||(31018562-31018615)
chr2 (174-210)||(896200-896236)
chr2 (167-255)||(2331776-2331863)
chr2 (161-209)||(10535794-10535842)
chr2 (160-240)||(28412325-28412404)
chr2 (158-210)||(30404884-30404936)
chr2 (178-210)||(31284041-31284073)
chr2 (174-210)||(38117193-38117229)
chr2 (254-290)||(42511322-42511358)
chr2 (177-209)||(42832311-42832343)
[»] scaffold0306 (1 HSPs)
scaffold0306 (134-210)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (135-290)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (134-210)||(21902-21978)
[»] chr3 (35 HSPs)
chr3 (171-260)||(8039818-8039908)
chr3 (156-247)||(5441029-5441119)
chr3 (159-210)||(8383231-8383282)
chr3 (166-231)||(5407261-5407325)
chr3 (157-209)||(24205076-24205128)
chr3 (135-201)||(8842280-8842346)
chr3 (159-209)||(9800014-9800064)
chr3 (157-258)||(25064881-25064981)
chr3 (157-210)||(28917973-28918026)
chr3 (158-210)||(2620087-2620139)
chr3 (161-209)||(4991002-4991050)
chr3 (158-210)||(26492239-26492291)
chr3 (144-203)||(10335327-10335386)
chr3 (167-206)||(21720746-21720785)
chr3 (135-210)||(55401025-55401100)
chr3 (254-292)||(4466538-4466576)
chr3 (262-292)||(5440965-5440995)
chr3 (136-210)||(8587055-8587129)
chr3 (160-210)||(12674535-12674585)
chr3 (254-292)||(13807237-13807275)
chr3 (136-210)||(32429414-32429488)
chr3 (167-208)||(3865592-3865633)
chr3 (167-208)||(12703989-12704030)
chr3 (157-210)||(15796328-15796381)
chr3 (178-231)||(34307794-34307846)
chr3 (174-210)||(4987325-4987361)
chr3 (174-210)||(6525714-6525750)
chr3 (167-203)||(10318075-10318111)
chr3 (166-210)||(14832080-14832124)
chr3 (174-210)||(21479107-21479143)
chr3 (177-209)||(25074781-25074813)
chr3 (174-210)||(26290360-26290396)
chr3 (158-210)||(26508083-26508135)
chr3 (254-290)||(27505334-27505370)
chr3 (174-210)||(40052321-40052357)
[»] scaffold0168 (3 HSPs)
scaffold0168 (160-290)||(21018-21149)
scaffold0168 (229-290)||(21217-21278)
scaffold0168 (229-290)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (157-210)||(8770-8823)
[»] scaffold0004 (1 HSPs)
scaffold0004 (168-209)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (175-260)||(53170-53256)
[»] scaffold0007 (1 HSPs)
scaffold0007 (157-209)||(225303-225355)
[»] scaffold0003 (1 HSPs)
scaffold0003 (157-258)||(241566-241668)
[»] chr4 (18 HSPs)
chr4 (174-209)||(35723420-35723455)
chr4 (129-210)||(7670625-7670709)
chr4 (174-208)||(17345451-17345485)
chr4 (157-210)||(23293020-23293073)
chr4 (157-210)||(36635296-36635349)
chr4 (157-209)||(847923-847975)
chr4 (167-209)||(7012048-7012090)
chr4 (160-210)||(20521883-20521933)
chr4 (167-290)||(30298928-30299048)
chr4 (167-290)||(30327796-30327916)
chr4 (187-258)||(30982863-30982935)
chr4 (176-210)||(40613441-40613475)
chr4 (178-210)||(1747205-1747237)
chr4 (167-210)||(16184801-16184842)
chr4 (246-290)||(18844423-18844467)
chr4 (168-208)||(20633468-20633508)
chr4 (157-209)||(24343479-24343531)
chr4 (254-290)||(28470448-28470484)
[»] scaffold0018 (2 HSPs)
scaffold0018 (157-210)||(178853-178906)
scaffold0018 (168-209)||(192284-192325)
[»] scaffold0103 (1 HSPs)
scaffold0103 (167-210)||(51793-51836)
[»] scaffold0022 (1 HSPs)
scaffold0022 (135-210)||(90793-90868)
[»] scaffold0697 (1 HSPs)
scaffold0697 (177-210)||(1636-1669)
[»] scaffold0652 (1 HSPs)
scaffold0652 (161-210)||(496-545)
[»] scaffold0279 (1 HSPs)
scaffold0279 (178-211)||(17903-17936)
[»] scaffold0110 (1 HSPs)
scaffold0110 (165-247)||(28830-28913)
[»] scaffold0475 (1 HSPs)
scaffold0475 (157-209)||(3288-3340)
[»] scaffold0450 (1 HSPs)
scaffold0450 (262-290)||(8564-8592)
[»] scaffold0027 (2 HSPs)
scaffold0027 (158-210)||(46655-46707)
scaffold0027 (244-292)||(46731-46778)


Alignment Details
Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 38816931 - 38816618
Alignment:
Q  1 aacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgcttgaattgaagcaataatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38816931 aacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgtttgaattgaagcaataatt 38816832  T
Q  101 tgagaaaatagaataattgaacggtaaccatatactatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||       |||||||||||||||||||||||||||||||||||    
T  38816831 tgagaaaatagaataattgaacggtaaccatatactatgaagcactaatacggactcc-------gcacggatactgacacgccgacaccgctaataatt 38816739  T
Q  201 tgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagttatattcgt 300  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38816738 tgagaaaatcgctatatttcagtataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgattcatagttatattcgt 38816639  T
Q  301 gaatcgtgatattattggaga 321  Q
    ||||||||||| | |||||||    
T  38816638 gaatcgtgatagtgttggaga 38816618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 290
Target Start/End: Complemental strand, 22423895 - 22423764
Alignment:
Q  161 acacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtc-ggac 257  Q
    ||||| ||||||||||||||| | |||||  ||||||||||||||||||| | ||| |||| ||||||  ||| ||||||||| ||||||||||| ||||    
T  22423895 acacgacacggatactgacaccctgacactactaataatttgagaaaatcac-ataattcaatataattatatatgtcggtgtcgtgtcggtgtctggac 22423797  T
Q  258 atggctaattcgaggagtgtccgtgcttcatag 290  Q
    | | ||||| |||||||||||||||||||||||    
T  22423796 acgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 19820503 - 19820428
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||| |||||||  ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||    
T  19820503 ctatgaagcacggatacggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaatc 19820428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 22013364 - 22013431
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttg 202  Q
    |||||||||||| |||||||  ||||||||| |||||| |||||||||||||||| ||||||||||||    
T  22013364 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttg 22013431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 6326391 - 6326332
Alignment:
Q  150 acggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||| ||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||    
T  6326391 acggataccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaat 6326332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 42469171 - 42469245
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||||||||| | |||||  ||| ||||| |||||||| |||||||||||||| | |||||||||||||||||    
T  42469171 ctatgaagcacggacacggacaccgaacacgacacggataatgacacgccgacacggataataatttgagaaaat 42469245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 15410532 - 15410483
Alignment:
Q  160 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  15410532 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaat 15410483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 3966492 - 3966577
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    ||||||| ||||||||||||||||||||||||||||| | | | |||| | ||||  ||||||||||||| ||||| ||||||||||    
T  3966492 actgacatgccgacaccgctaataatttgagaaaatcac-acaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggaca 3966577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 6035472 - 6035505
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaa 207  Q
    ||||||||||||||||||||||||||||||||||    
T  6035472 actgacacgccgacaccgctaataatttgagaaa 6035505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 8420075 - 8420124
Alignment:
Q  243 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 292  Q
    |||||||||||||||  | |||||||||||||| ||||||||||||||||    
T  8420075 gtgtcggtgtcggacgcgcctaattcgaggagtatccgtgcttcatagtt 8420124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 21191143 - 21191090
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| |||||| ||||||| |||||||| ||||||||||||| ||||||    
T  21191143 ccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatc 21191090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 9929668 - 9929720
Alignment:
Q  238 gtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    |||| |||||||| ||||||| | ||||||||||||||||| |||||||||||    
T  9929668 gtgtcgtgtcggtatcggacacgactaattcgaggagtgtctgtgcttcatag 9929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 17123037 - 17123073
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||| |||||||||||||||||||||||||    
T  17123037 actgacacgccaacaccgctaataatttgagaaaatc 17123073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 21522722 - 21522766
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataattt 201  Q
    ||||||||| |||||| |||||||||||||||| |||||||||||    
T  21522722 ccggacacgacacggacactgacacgccgacacagctaataattt 21522766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 21533288 - 21533332
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataattt 201  Q
    ||||||||| |||||| |||||||||||||||| |||||||||||    
T  21533288 ccggacacgacacggacactgacacgccgacacagctaataattt 21533332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 27144452 - 27144488
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||||||||||||||||||||| |||||    
T  27144452 actgacacgccgacaccgctaataatttgaggaaatc 27144488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 11685928 - 11686012
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    ||||||| |||||||||||||||||||||||||| |||| ||| || | | ||||  ||||||||||||| || |||||||||||||    
T  11685928 actgacatgccgacaccgctaataatttgagaaagtcgc-ataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggaca 11686012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 14674251 - 14674294
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  14674251 cacggacactgacacgccgacacagctaataatttgaaaaaatc 14674294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 15382449 - 15382500
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 208  Q
    ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||    
T  15382449 ccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 19579683 - 19579726
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||    
T  19579683 cacggacactgatacgccgacacagctaataatttgagaaaatc 19579726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 34879332 - 34879375
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||    
T  34879332 cacggatacggacacgccggcaccgctaaaaatttgagaaaatc 34879375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 4105222 - 4105280
Alignment:
Q  150 acggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 208  Q
    |||||| ||||||| | ||||||||||||||||||||||   |||||||||||| ||||    
T  4105222 acggataccggacatgacacggatactgacacgccgacataactaataatttgaaaaaa 4105280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 5873590 - 5873548
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||    
T  5873590 cacggacactgacatgccgacacctctaataatttgagaaaat 5873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 24906280 - 24906250
Alignment:
Q  262 ctaattcgaggagtgtccgtgcttcatagtt 292  Q
    |||||||||||||||||||||||||||||||    
T  24906280 ctaattcgaggagtgtccgtgcttcatagtt 24906250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 209
Target Start/End: Original strand, 27932229 - 27932259
Alignment:
Q  179 cacgccgacaccgctaataatttgagaaaat 209  Q
    |||||||||||||||||||||||||||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaat 27932259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 28588742 - 28588708
Alignment:
Q  176 tgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||| ||||||||||||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatc 28588708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 36642849 - 36642803
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttga 203  Q
    ||||||||| |||||| |||||||||||||||| | |||||||||||    
T  36642849 ccggacacgacacggacactgacacgccgacacagttaataatttga 36642803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 19552626 - 19552577
Alignment:
Q  161 acacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||| |||||| |||||||||||||||| | ||||||||||| ||||||    
T  19552626 acacgacacggacactgacacgccgacacagttaataatttgaaaaaatc 19552577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 32630840 - 32630770
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||||||||| |||||||| ||||| ||| |||    | |||||||| ||||||| |||||||||||||||||    
T  32630840 ctatgaagcacggatacggataccggatacgacac----attgacacgctgacaccgataataatttgagaaaat 32630770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 212
Target Start/End: Complemental strand, 32767004 - 32766975
Alignment:
Q  183 ccgacaccgctaataatttgagaaaatcgc 212  Q
    ||||||||||||||||||||||||||||||    
T  32767004 ccgacaccgctaataatttgagaaaatcgc 32766975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 2436911 - 2436939
Alignment:
Q  174 actgacacgccgacaccgctaataatttg 202  Q
    |||||||||||||||||||||||||||||    
T  2436911 actgacacgccgacaccgctaataatttg 2436939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 21137661 - 21137713
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||||  |||||| ||||||||||||||| || ||||||| |||||||||    
T  21137661 ccggacacaacacggacactgacacgccgacatcggtaataatctgagaaaat 21137713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 31084312 - 31084348
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  31084312 actgacacgccgacacagctaataatttgaaaaaatc 31084348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 41995460 - 41995543
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    ||||||||||||||||  ||||||||| || |||||| | ||| |||| | |||||| |||||||||  || |||||||||||||    
T  41995460 actgacacgccgacacaactaataattcgaaaaaatcac-ataattcaatgtaattaagtgtcggtgccgtatcggtgtcggaca 41995543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 10294079 - 10294181
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 254  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||||||| |||||| |||||||| | ||||  ||||||||||||| |||| |||||||    
T  10294079 ccggacacgacacggatactgacatgccgataccgctaataatttgagataatcgc-atatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcg 10294177  T
Q  255 gaca 258  Q
    ||||    
T  10294178 gaca 10294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 9027143 - 9027203
Alignment:
Q  150 acggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||| |||||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  9027143 acggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatc 9027203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 16766669 - 16766771
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcg 254  Q
    ||||||||| || ||| |||||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| ||||||||||||    
T  16766669 ccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcg 16766767  T
Q  255 gaca 258  Q
    ||||    
T  16766768 gaca 16766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 853968 - 853893
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||| |||| |||||||  ||||||||| ||||||| |||||||||||||||  |||||||||||| ||||||    
T  853968 ctatgaatcacggatacggacaccggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatc 853893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 5732595 - 5732474
Alignment:
Q  159 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    ||||||| || ||| |||||||||||||||||| |||||||||||||||||| | |||||| | | ||||||| |         ||||||||||||||||    
T  5732595 ggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcac-atattttagtgtaattatat---------gtgtcggtgtcggaca 5732506  T
Q  259 tggctaattcgaggagtgtccgtgcttcatag 290  Q
     | ||||| |||||||||||| ||||||||||    
T  5732505 cgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 8805656 - 8805524
Alignment:
Q  160 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggt---gtcgga 256  Q
    |||||| ||| || || |||||| || ||| |||||||||||||||||||| | ||| || | | ||||||||||||||||| ||||| |    || |||    
T  8805656 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcac-ataatttagtgtaattatgtgtcggtgtagtgtcagacacgtggga 8805558  T
Q  257 catggctaattcgaggagtgtccgtgcttcatag 290  Q
    |||| ||||| |||||||||||||||||||||||    
T  8805557 catgcctaatccgaggagtgtccgtgcttcatag 8805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 9629357 - 9629408
Alignment:
Q  159 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  9629357 ggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatc 9629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 9658854 - 9658904
Alignment:
Q  160 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||| |||||||||||||||||||||||||||| ||||||||    
T  9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatc 9658904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 19040339 - 19040377
Alignment:
Q  172 atactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19040339 atactgacacgccgacaccgctaataatttgagaaaatc 19040377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 5000713 - 5000660
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||| | |||||||||||||||| ||||||||||||||||| |||||||||    
T  5000713 ccggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatc 5000660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 426608 - 426548
Alignment:
Q  150 acggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| ||||||||| |||||| |||||||||||||||| | ||||||||||| ||||||    
T  426608 acggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatc 426548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 8365628 - 8365560
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttga 203  Q
    |||||||||||| |||||||  || |||||| |||||| ||||||||||||||||  ||||||||||||    
T  8365628 ctatgaagcacggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttga 8365560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 9107457 - 9107355
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcg 254  Q
    ||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||| | | | |||| | |||||  | |||||||||| ||||||||||||    
T  9107457 ccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcg 9107359  T
Q  255 gaca 258  Q
    ||||    
T  9107358 gaca 9107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 12696277 - 12696348
Alignment:
Q  137 atgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||||||| |||||||  | ||||||| |||||| |||||||||||||||| ||||||||||||| |||||    
T  12696277 atgaagcacggatacggacac-ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 12696348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 13851712 - 13851760
Alignment:
Q  161 acacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaat 13851760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 20371187 - 20371144
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  20371187 cacggacattgacacgccgacaccgctaataatttgagaaaatc 20371144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 30866253 - 30866178
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||| |||||||||||  ||||||| | ||| || || ||||| || |||||||||||||||||||||||||    
T  30866253 ctatgaagtacgaatacggacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatc 30866178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 6389693 - 6389767
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||||||||| | || ||  ||||||||| |||||| ||| |||||||||||| | |||||||||||||||||    
T  6389693 ctatgaagcacggacacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaat 6389767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 7977915 - 7977865
Alignment:
Q  159 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||| || |||||||||||||||||||| ||||||||||||| |||||    
T  7977915 ggacacgacatggatactgacacgccgacacagctaataatttgaaaaaat 7977865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 7265668 - 7265627
Alignment:
Q  169 cggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatc 7265627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 7938088 - 7938141
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| || ||| |||||||||||||||| ||||||||||||| ||||||    
T  7938088 ccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatc 7938141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 34073432 - 34073337
Alignment:
Q  159 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtc 253  Q
    ||||||| |||||| ||||||| ||| ||| ||||||||||||||||||||| | ||| |||| | ||||  |||| |||||||| |||||||||||    
T  34073432 ggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctc-ataattcagtgtaattatatgggtcggtgtcgtgtcggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 3398569 - 3398637
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttga 203  Q
    |||||||||| | |||||||   || ||||| |||||| |||||||||||||||| |||||||||||||    
T  3398569 ctatgaagcatggatacggacatcgaacacgacacggacactgacacgccgacacagctaataatttga 3398637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 8777059 - 8777007
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||| |||||| ||||||||||||||||  |||||||||||| ||||||    
T  8777059 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 8777007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 426525 - 426478
Alignment:
Q  243 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||||    
T  426525 gtgtcggtgtcggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 17841666 - 17841623
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  17841666 cacggacactgacacgccgacacagctaataatttgaaaaaatc 17841623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 31579311 - 31579229
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 241  Q
    |||||||| || ||| |||| ||| || |||||| |||||||||||||||||| | ||| |||| | |||||||||||||||||    
T  31579311 cggacacgacatggacactgccacaccaacaccgttaataatttgagaaaatcac-ataattcagtgtaattatgtgtcggtgt 31579229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 20518295 - 20518369
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||||||||| |||||||| ||||| ||| ||| || |||||||| |  ||||| |||| |||||||||||||    
T  20518295 ctatgaagcacggatacggatgccggatacgacacagacactgacacactaacaccactaacaatttgagaaaat 20518369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 34073306 - 34073276
Alignment:
Q  262 ctaattcgaggagtgtccgtgcttcatagtt 292  Q
    |||||||||||||||||||||||||||||||    
T  34073306 ctaattcgaggagtgtccgtgcttcatagtt 34073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 2117134 - 2117175
Alignment:
Q  249 gtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    |||||||||||| |||||  ||||||||||||||||||||||    
T  2117134 gtgtcggacatgcctaatcggaggagtgtccgtgcttcatag 2117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 10842524 - 10842557
Alignment:
Q  177 gacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||||||||||||||||| ||||||    
T  10842524 gacacgccgacaccgctaataatttgaaaaaatc 10842557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 26562664 - 26562759
Alignment:
Q  160 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 254  Q
    ||||| ||||| | || ||||||||||||| ||||| |||||||||||||| | ||| |||| | ||||  ||||||||| ||| ||||||||||||    
T  26562664 gacaccgcacgaacacggacacgccgacactgctaaaaatttgagaaaatcac-ataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcg 26562759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 34595106 - 34595159
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| |||||| | ||||||||||||||  |||||||||||| ||||||    
T  34595106 ccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatc 34595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 677826 - 677862
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||| | ||||||||||||||||||    
T  677826 actgacacgccgacactgttaataatttgagaaaatc 677862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 7996448 - 7996412
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  7996448 actgacatgccgacactgctaataatttgagaaaatc 7996412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 8022353 - 8022389
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  8022353 actgacatgccgacactgctaataatttgagaaaatc 8022389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 10339196 - 10339160
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||||||||| | |||||||||||||||    
T  10339196 actgacacgccgacaccgcgattaatttgagaaaatc 10339160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 16833281 - 16833333
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||| ||| || ||||||||||||||||  |||||||||||| ||||||    
T  16833281 cggacacgacacagacactgacacgccgacacaactaataatttgaaaaaatc 16833333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 17341734 - 17341698
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  17341734 actgacacgccgacaccgttaataatttgataaaatc 17341698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 21395374 - 21395342
Alignment:
Q  177 gacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||||| ||||||||||||||||||||||||    
T  21395374 gacacgccaacaccgctaataatttgagaaaat 21395342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 21424872 - 21424836
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  21424872 actgacacgccaacaccgctaataatttgaaaaaatc 21424836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 34290147 - 34290064
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    ||||||| ||||||||  ||||||||||| || |||| | ||| |||| | ||||||||||||||||| ||||| ||||| ||||    
T  34290147 actgacatgccgacacaactaataatttgcgagaatcac-ataattcagtgtaattatgtgtcggtgtcgtgtcagtgtccgaca 34290064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 27944991 - 27945065
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||||||||| |||||||  ||||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  27944991 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaat 27945065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 11722192 - 11722132
Alignment:
Q  150 acggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||    
T  11722192 acggataccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatc 11722132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 19206015 - 19206107
Alignment:
Q  150 acggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 241  Q
    |||||| || |||||| |||||| ||  ||||||||||||||||||||||||||||||||| | ||| |||||||||||  |||||||||||||    
T  19206015 acggataccagacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcac-ataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 24105629 - 24105702
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||||||||| |||||||| | ||||||| |||||| |||||||||||||||| ||||||||||||| |||||    
T  24105629 ctatgaagcacggatacggatac-ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 24105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 29787435 - 29787354
Alignment:
Q  178 acacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatg 260  Q
    ||||||||||||||||||||||||||||||||| | ||| |||| | ||||||||||| |||||  ||||||||| |||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattatgtgttggtgtaatgtcggtgttggacatg 29787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 32308109 - 32308194
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||| | ||||  |||||||| |||| |||||||||| |||||    
T  32308109 actgacacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggaca 32308194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 290
Target Start/End: Original strand, 11700798 - 11700909
Alignment:
Q  180 acgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcgg--acatggctaattcgaggagtgt 277  Q
    |||| ||||||| ||||||||||| |||||| | ||| |||| | |||||||||||| |||| || ||||||||||  ||| ||||||| ||||||||||    
T  11700798 acgctgacaccgttaataatttgacaaaatcac-ataattcaatgtaattatgtgtctgtgttgtctcggtgtcggacacacggctaatccgaggagtgt 11700896  T
Q  278 ccgtgcttcatag 290  Q
    || || |||||||    
T  11700897 ccctgattcatag 11700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 258
Target Start/End: Original strand, 24339605 - 24339716
Alignment:
Q  148 atacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtg 245  Q
    |||||||  ||||||||| || ||| | |||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| |||    
T  24339605 atacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtg 24339703  T
Q  246 tcggtgtcggaca 258  Q
    |||||||||||||    
T  24339704 tcggtgtcggaca 24339716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 2034392 - 2034462
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaa 206  Q
    |||||||||||| |||||||| | | ||||| |||||||||| ||||| ||||||| |||||||||||||||    
T  2034392 ctatgaagcacggatacggatactg-acacgacacggatacttacacgtcgacaccactaataatttgagaa 2034462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 2425818 - 2425767
Alignment:
Q  159 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||    
T  2425818 ggacacgacacagatactgacacgccggcaccgttaataatttgagaaaatc 2425767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 8046103 - 8046061
Alignment:
Q  168 acggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  8046103 acggatactgacacgccaacaccactaataatttgagaaaatc 8046061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 22484014 - 22484082
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 241  Q
    |||||||||||||||||||||||||||| ||||||| || ||| |||| ||||||  |||||||||||||    
T  22484014 actgacacgccgacaccgctaataattttagaaaattgc-ataattcagtataattatatgtgtcggtgt 22484082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 23191879 - 23191921
Alignment:
Q  168 acggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||| ||||| |||||||||||||||||||||||||||||||    
T  23191879 acggacactgatacgccgacaccgctaataatttgagaaaatc 23191921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 26733279 - 26733329
Alignment:
Q  160 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||| ||||||||| |||||||||||||||||||| ||||||    
T  26733279 gacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatc 26733329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 30731031 - 30731104
Alignment:
Q  179 cacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtc 253  Q
    |||||||||||||| ||||||||||||||||| | ||| |||| | ||||| ||||||||||| |||| ||||||    
T  30731031 cacgccgacaccgcgaataatttgagaaaatcac-ataattcagtgtaattgtgtgtcggtgtcgtgttggtgtc 30731104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 1433430 - 1433479
Alignment:
Q  161 acacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||| |||||| | |||||||||||||||| ||||||||||||||||||    
T  1433430 acacgacacggacattgacacgccgacaccgttaataatttgagaaaatc 1433479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 11072290 - 11072362
Alignment:
Q  177 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggt 250  Q
    ||||||||||||||| ||||||||||| ||||    |||| |||| ||||||||||||||||||| ||||||||    
T  11072290 gacacgccgacaccgataataatttgaaaaaaata-tataattcaatataattatgtgtcggtgtcgtgtcggt 11072362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 49107795 - 49107844
Alignment:
Q  159 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 208  Q
    ||||||| ||||||  ||||||| ||||||||||||||||||||||||||    
T  49107795 ggacacgacacggactctgacacaccgacaccgctaataatttgagaaaa 49107844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 290
Target Start/End: Complemental strand, 7328805 - 7328639
Alignment:
Q  130 atatactatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat- 228  Q
    ||||||||||||||||| |||||||  ||| ||||| ||| || | | ||||| ||| || |||||||||||||||||||  | ||| || | | ||||     
T  7328805 atatactatgaagcacggatacggacaccgaacacgacacagacattaacacgtcgatactgctaataatttgagaaaataac-ataatttagtgtaatt 7328707  T
Q  229 -tatgtgtcggtgtggtgtc-----ggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
     ||||||||||||| |||||     ||||||||||| | ||||| ||| |||||| ||||||||||||    
T  7328706 atatgtgtcggtgtcgtgtcgtgttggtgtcggacacgcctaatccgatgagtgttcgtgcttcatag 7328639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 20549780 - 20549816
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||| ||||||||||||||||||||||||||||    
T  20549780 actgacacaccgacaccgctaataatttgagaaaatc 20549816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 43249965 - 43250017
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||| | |||||| |||||||||||||||| | |||||||||||||||||    
T  43249965 ccggacaagacacggacactgacacgccgacacggataataatttgagaaaat 43250017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 2948669 - 2948708
Alignment:
Q  171 gatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  2948669 gatactgacacgccgacaccgctgataattttagaaaatc 2948708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 6630982 - 6630897
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    ||||||||||||||||| |||||||||||||||| || || || |||| | ||||  ||||||||| ||| |||| |||||||||||    
T  6630982 actgacacgccgacaccactaataatttgagaaagtcact-taattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggaca 6630897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 21828482 - 21828439
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||||||||||||||| || |||||||||||||||    
T  21828482 cacggacactgacacgccgacaccgttagtaatttgagaaaatc 21828439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 209
Target Start/End: Original strand, 28155563 - 28155594
Alignment:
Q  178 acacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||||||||||||||||||||||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaat 28155594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 43027578 - 43027503
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||| || ||||  | ||||||| |||||| ||||||||| |||| | ||||||||||||| ||||||    
T  43027578 ctatgaagcacggatgcggacactggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatc 43027503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 5235960 - 5236010
Alignment:
Q  159 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||| ||| || ||||||||| |||||||||||||||||| |||||||    
T  5235960 ggacacgacacagacactgacacgtcgacaccgctaataatttaagaaaat 5236010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 9933282 - 9933347
Alignment:
Q  192 ctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    |||||||||||| |||||| | |||||||| || | ||||||||| |||| ||||||||||||||||    
T  9933282 ctaataatttgaaaaaatcac-atatttcagtaaacttatgtgtcagtgtcgtgtcggtgtcggaca 9933347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 20545312 - 20545270
Alignment:
Q  168 acggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  20545312 acggatacggacacgccaacaccgctaataatttgaaaaaatc 20545270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 4017879 - 4017830
Alignment:
Q  159 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 208  Q
    ||||||| |||||| || ||||||||||||| | ||||||||||||||||    
T  4017879 ggacacgacacggacaccgacacgccgacacggataataatttgagaaaa 4017830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 291
Target Start/End: Original strand, 17852091 - 17852120
Alignment:
Q  262 ctaattcgaggagtgtccgtgcttcatagt 291  Q
    ||||||||||||||||||||||||||||||    
T  17852091 ctaattcgaggagtgtccgtgcttcatagt 17852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 25791642 - 25791675
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaa 207  Q
    ||||||||||||||||||||||| ||||||||||    
T  25791642 actgacacgccgacaccgctaattatttgagaaa 25791675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 26329467 - 26329418
Alignment:
Q  159 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 208  Q
    ||||||| ||| || ||||||||||||||| || ||||||||||||||||    
T  26329467 ggacacgacacagacactgacacgccgacatcgttaataatttgagaaaa 26329418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 11061162 - 11061110
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||| ||| |||||| |||||||| ||||||| ||||||||||||| ||||||    
T  11061162 cggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatc 11061110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Original strand, 15680900 - 15680928
Alignment:
Q  262 ctaattcgaggagtgtccgtgcttcatag 290  Q
    |||||||||||||||||||||||||||||    
T  15680900 ctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 22868031 - 22868067
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  22868031 actgacacgccgacaccactaataatatgagaaaatc 22868067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 22651948 - 22652050
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcg 254  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||| |||||| | ||| |||| |||||||  | |||||||||| ||||||||||||    
T  22651948 ccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcaatataattacaagtgtcggtgtcgtgtcggtgtcg 22652046  T
Q  255 gaca 258  Q
    ||||    
T  22652047 gaca 22652050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 29510391 - 29510289
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcg 254  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||| |||||| | | | |||| |||||||  | |||||||||| ||||||||||||    
T  29510391 ccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtataattacaagtgtcggtgtagtgtcggtgtcg 29510293  T
Q  255 gaca 258  Q
    ||||    
T  29510292 gaca 29510289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 25192456 - 25192388
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttga 203  Q
    ||||||||||||||||||||   ||||||||  ||||| |||||||||||||||| |||||||||||||    
T  25192456 ctatgaagcacgaatacggacatcggacacgatacggacactgacacgccgacacagctaataatttga 25192388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 27213519 - 27213572
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||    
T  27213519 ccggacacgacacggatacagacacgccgacactgctaataatttcagaaaatc 27213572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 31109595 - 31109552
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    
T  31109595 cacggacactgacacgccgacaccgttaataatttgagaaaatc 31109552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 926888 - 926822
Alignment:
Q  144 acgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||| |||||  ||||||||| |||||| ||||||||||| ||||  |||||||||||||||||||    
T  926888 acgaacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatc 926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 126435 - 126390
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttga 203  Q
    ||||||||  ||||||||||||||||| ||||||||||||||||||    
T  126435 cggacacgatacggatactgacacgccaacaccgctaataatttga 126390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 39954346 - 39954313
Alignment:
Q  177 gacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||||||||||||||||||||||||    
T  39954346 gacacgccgacaccgctaataatttgagaaaatc 39954313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 31236651 - 31236611
Alignment:
Q  170 ggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  31236651 ggatacggacacgccgacactgctaataatttgagaaaatc 31236611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 37283887 - 37283812
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtgg 243  Q
    |||||| ||||||| || | ||||||||||||| |||||||||| | ||| |||| | |||||||||||||||||||    
T  37283887 cacggacactgacatgcgggcaccgctaataatctgagaaaatcac-ataattcagtgtaattatgtgtcggtgtgg 37283812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 13437073 - 13436998
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||| | | |||  ||||||| | || ||| |||||||||||||||| ||||||||||||| ||||||    
T  13437073 ctatgaagcacggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatc 13436998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 24362298 - 24362236
Alignment:
Q  148 atacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||  ||||| ||| ||| || || ||||||||||||||||||||||||||||| ||||    
T  24362298 atacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatc 24362236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 27101506 - 27101540
Alignment:
Q  176 tgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||||||||||||||| ||||||    
T  27101506 tgacacgccgacaccgctaataatttgaaaaaatc 27101540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 34897068 - 34897110
Alignment:
Q  168 acggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||| || |||||| |||||||||||||||||||||||||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatc 34897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 13844663 - 13844630
Alignment:
Q  177 gacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||| ||||||||||||||||||||    
T  13844663 gacacgccgacactgctaataatttgagaaaatc 13844630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 4298972 - 4298920
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||| ||| |||||| |||||||||||| | ||||||||||| ||||||    
T  4298972 cggacacgacacagatactaacacgccgacacagttaataatttgaaaaaatc 4298920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 4673511 - 4673459
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||| ||| || |||||||||||||||| | ||||||||||| ||||||    
T  4673511 cggacacgacacagacactgacacgccgacacagataataatttgaaaaaatc 4673459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 20873042 - 20873094
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||| |||||| |||||||||||||||  | ||||||||||| ||||||    
T  20873042 cggacacgacacggacactgacacgccgacatagataataatttgaaaaaatc 20873094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 29776013 - 29776108
Alignment:
Q  162 cacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    |||| |||||| | ||||| | |||||| |||||||||||||||||||| |  || |||| ||||||||| |||||||||   ||| ||||||||||    
T  29776013 cacgacacggacattgacaagtcgacactgctaataatttgagaaaatcac-gtaattcagtataattatatgtcggtgttaagtcagtgtcggaca 29776108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 6427323 - 6427375
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  6427323 cggacacggcacggacactgacacgccaacaccgctaataatttgagaaaatc 6427375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 398852 - 398799
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  398852 ccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatc 398799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 40917723 - 40917776
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  40917723 ccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaatc 40917776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 2896207 - 2896155
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||||    
T  2896207 cggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatc 2896155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 5376609 - 5376535
Alignment:
Q  134 actatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||| ||||| |||| ||| ||||||||| |||||| ||| |||||||||||||||||||||||| |||||||    
T  5376609 actatgaggcacgtatacagat-ccggacacgacacggacactaacacgccgacaccgctaataatttaagaaaat 5376535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 1262848 - 1262933
Alignment:
Q  149 tacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 235  Q
    ||||||| ||||||||| |||| | || ||||||||||||| |||||||||||||||||||| | ||| |||| |||||||| ||||    
T  1262848 tacggataccggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcac-ataattcaatataattaagtgt 1262933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 1486803 - 1486703
Alignment:
Q  150 acggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtc 247  Q
    |||||| ||||| ||| ||||||||||||||||| ||||| ||||||||||||| |||||| | ||| |||| | |||||||  |||||||||| |||||    
T  1486803 acggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcac-ataattcagtgtaattataagtgtcggtgtcgtgtc 1486705  T
Q  248 gg 249  Q
    ||    
T  1486704 gg 1486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 48547991 - 48547938
Alignment:
Q  237 ggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||| |||||||||||||| | | |||||||||||||||||||||||||||||    
T  48547991 ggtgtcgtgtcggtgtcggatacgcctaattcgaggagtgtccgtgcttcatag 48547938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 143 - 289
Target Start/End: Complemental strand, 10572690 - 10572535
Alignment:
Q  143 cacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtg 240  Q
    |||| |||||||  ||||||||| || | | ||||||||||||||||| ||||||||||||||||||| | ||| |||  | |||||  |||||||||||    
T  10572690 cacggatacggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcac-ataattcggtgtaattaaatgtgtcggtg 10572592  T
Q  241 tggtgtcggtgtc--------ggacatggctaattcgaggagtgtccgtgcttcata 289  Q
    | |||| ||||||        ||||| | ||||||| ||||||||||||||||||||    
T  10572591 ttgtgttggtgtcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 12443538 - 12443494
Alignment:
Q  166 gcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  12443538 gcacggatacggacacgccgacacagctaataatttgagaaaatc 12443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 17831601 - 17831565
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||||||||||||||||||||||||    
T  17831601 actgacacgccgacaccgctaataatttgagaaaatc 17831565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 36878450 - 36878486
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||||||||||||||||||||||||    
T  36878450 actgacacgccgacaccgctaataatttgagaaaatc 36878486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 5927449 - 5927374
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||| ||||||| |||||||  ||||||||| |||||| ||||||||||  |||| ||||||||||||| ||||||    
T  5927449 ctattaagcacggatacggacaccggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatc 5927374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 44482234 - 44482343
Alignment:
Q  189 ccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg-----gctaattcgaggagtgtccgt 281  Q
    ||||| |||||||||||||||| | ||| |||| | |||||||  |||||||||| |||||||||||||||| |     |||||| ||||||||||||||    
T  44482234 ccgcttataatttgagaaaatcac-ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacagctaatccgaggagtgtccgt 44482332  T
Q  282 gcttcatagtt 292  Q
    ||| |||||||    
T  44482333 gctccatagtt 44482343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 9709795 - 9709845
Alignment:
Q  160 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||| ||||||| ||| |||||||||||||||||||||||||    
T  9709795 gacacgacacggacactgacatgcctacaccgctaataatttgagaaaatc 9709845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 34298411 - 34298461
Alignment:
Q  160 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||| |||||||| |||||||| |||||||||||||||||||    
T  34298411 gacacgacacggaaactgacacaccgacaccactaataatttgagaaaatc 34298461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 38503302 - 38503386
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggt 250  Q
    |||||| ||| |||| ||||||||||||||||||||||||||||  ||||||||| | ||||  |||||||||||||  |||||||    
T  38503302 cacggacactaacacaccgacaccgctaataatttgagaaaatc-atatatttcagtgtaattatatgtgtcggtgtcctgtcggt 38503386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 19562691 - 19562655
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||| ||||||||||||||||||||    
T  19562691 actgacacgccgacactgctaataatttgagaaaatc 19562655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 609528 - 609493
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||||||||||||| ||||||||||||||||||    
T  609528 actgacacgccgacaccactaataatttgagaaaat 609493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 6415078 - 6415035
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| ||||||||||||||| ||||||| |||||||||||||    
T  6415078 cacggacactgacacgccgacatcgctaattatttgagaaaatc 6415035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 46348460 - 46348417
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  46348460 cacggacactgacacgccgacacagctaataatttgaaaaaatc 46348417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 48040558 - 48040503
Alignment:
Q  148 atacggattccggacacggcacggatactgacacgccgacaccgctaataatttga 203  Q
    |||||||  ||||||||| |||||| |||||||||||||||| | |||||||||||    
T  48040558 atacggacaccggacacgacacggacactgacacgccgacacagataataatttga 48040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 48450673 - 48450622
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||||| |||||| ||||||||||| |||| ||||||||||||| |||||    
T  48450673 cggacacgacacggacactgacacgccaacacagctaataatttgaaaaaat 48450622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 3490460 - 3490426
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaa 208  Q
    |||||||||||||||| ||||||||||||||||||    
T  3490460 actgacacgccgacactgctaataatttgagaaaa 3490426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 10475045 - 10475011
Alignment:
Q  176 tgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||||||||||||| |||||||||||    
T  10475045 tgacacgccgacaccgctaataacttgagaaaatc 10475011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 39130876 - 39130802
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||||||||| |||||||  ||||||||| || ||||| |||||||| |||||   ||||||||| |||||||    
T  39130876 ctatgaagcacggatacggacaccggacacgacatggatattgacacgctgacactattaataattttagaaaat 39130802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 40285724 - 40285686
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatcgc 212  Q
    |||||||| || |||||||||||||||||||||||||||    
T  40285724 actgacacaccaacaccgctaataatttgagaaaatcgc 40285686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 20157437 - 20157384
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| |||||  ||||||||  |||||||||||||||| ||||||||||    
T  20157437 ccggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatc 20157384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 21530681 - 21530714
Alignment:
Q  177 gacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||||| ||||||||||||||||||    
T  21530681 gacacgccgacaccgttaataatttgagaaaatc 21530714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 25361881 - 25361960
Alignment:
Q  180 acgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    ||||||||||| || |||||||||||||||| | ||| |||| | ||||  |||||||| |||| ||||||||||||||||    
T  25361881 acgccgacaccactgataatttgagaaaatcac-ataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggaca 25361960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 209
Target Start/End: Complemental strand, 41877534 - 41877505
Alignment:
Q  180 acgccgacaccgctaataatttgagaaaat 209  Q
    ||||||||||||||||||||||||||||||    
T  41877534 acgccgacaccgctaataatttgagaaaat 41877505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 9828036 - 9828118
Alignment:
Q  177 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataa--ttatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    |||||||||||||| |||||||||||| |||||| | ||| |||| | |||  |||||||||||||| ||||| ||||| ||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcac-ataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagaca 9828118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 15641116 - 15641064
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| | |||||| ||||||| |||||||| ||||||||||| ||||||||    
T  15641116 cggacatgacacggacactgacatgccgacactgctaataatttaagaaaatc 15641064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 18556533 - 18556497
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttga 203  Q
    |||||| |||||||||||||||| |||||||||||||    
T  18556533 cacggacactgacacgccgacacagctaataatttga 18556497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 25452215 - 25452152
Alignment:
Q  177 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 241  Q
    |||| ||| |||| |||||||||||||||||||| | ||| |||| | |||||||||||||||||    
T  25452215 gacatgccaacactgctaataatttgagaaaatctc-ataattcagtgtaattatgtgtcggtgt 25452152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 34315663 - 34315722
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaa 195  Q
    |||||||||||| ||||||||   ||||||| |||||||||||||| |||||||| |||||    
T  34315663 ctatgaagcacggatacggatat-ggacacgacacggatactgacatgccgacacagctaa 34315722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 21782927 - 21782817
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtg 234  Q
    ||||||||||||||||| ||  | ||||||| |||  | |||||||||||||||| |||||||||||||||||||| | ||| |||| | ||||||||||    
T  21782927 ctatgaagcacgaatacagacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcac-ataattcagtgtaattatgtg 21782829  T
Q  235 tcggtgtggtgt 246  Q
     |||||| ||||    
T  21782828 ccggtgtcgtgt 21782817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 33519736 - 33519800
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataat 199  Q
    |||||||||||| |||||||  ||||||||| | ||||||||||||| |||||||||||||||||    
T  33519736 ctatgaagcacggatacggacaccggacacgacgcggatactgacacaccgacaccgctaataat 33519800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 20539783 - 20539708
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||| |||||||  | ||||||| |||||| ||||||||| |||||| ||||||||||||| ||||||    
T  20539783 ctatgaagcacggatacggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatc 20539708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 21616737 - 21616787
Alignment:
Q  160 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatc 21616787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 4332898 - 4332981
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 241  Q
    ||||||||||||| |||||| ||| |||||||| | |||||||||| ||||||| | ||| |||| | |||||||||||||||||    
T  4332898 ccggacacggcacagatacttacatgccgacactgataataatttgggaaaatcac-ataattcaatgtaattatgtgtcggtgt 4332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 1327976 - 1328033
Alignment:
Q  183 ccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 241  Q
    ||||||||||||||||||||||||||||  || | |||| |||||||||||||||||||    
T  1327976 ccgacaccgctaataatttgagaaaatc-ataaaattcagtataattatgtgtcggtgt 1328033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 36409711 - 36409614
Alignment:
Q  160 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    |||||| |||||||||| ||| |||||||||||| ||||||||| |||||| | ||| || | | |||||||||||||||||  ||| |||||| ||||    
T  36409711 gacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcac-ataatttagtgtaattatgtgtcggtgtcatgttggtgtctgaca 36409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 19536507 - 19536434
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 208  Q
    |||||||||||  |||||||  ||||||||| |||||| | ||||||||||||||  |||||||||||| ||||    
T  19536507 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaa 19536434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 23717999 - 23718048
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaa 207  Q
    |||||| | |||||| |||||||| |||||||||||||||||||||||||    
T  23717999 cggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 23718048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 24105671 - 24105720
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaa 207  Q
    |||||| | |||||| |||||||| |||||||||||||||||||||||||    
T  24105671 cggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 24105720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 290
Target Start/End: Original strand, 19573970 - 19574078
Alignment:
Q  177 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtg 276  Q
    ||||||||||||||| ||||||||| |||||||  | ||| |||| | |||||||     ||||  ||||||||||||||||   |||||||||||||||    
T  19573970 gacacgccgacaccgataataatttaagaaaataac-ataattcagtgtaattata----ggtggcgtgtcggtgtcggacacacctaattcgaggagtg 19574064  T
Q  277 tccgtgcttcatag 290  Q
    ||| ||||||||||    
T  19574065 tccatgcttcatag 19574078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 44860320 - 44860394
Alignment:
Q  185 gacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 258  Q
    |||||||||||||||||||||||||||| ||| |||| | ||||  ||||||||||||| |||| ||||| |||||    
T  44860320 gacaccgctaataatttgagaaaatcgc-ataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggaca 44860394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 260
Target Start/End: Complemental strand, 18420506 - 18420417
Alignment:
Q  172 atactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg 260  Q
    ||||||||||||| |||| |||||||||||||||||||| | ||| |||| |  ||||||  |||||||||| |||||  |||||||||||    
T  18420506 atactgacacgccaacactgctaataatttgagaaaatcac-ataattcaatgcaattataagtgtcggtgttgtgtccatgtcggacatg 18420417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 19536408 - 19536361
Alignment:
Q  243 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||||||    
T  19536408 gtgtcggtgtcggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 37411313 - 37411278
Alignment:
Q  175 ctgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||||||||||||||||||||||||||    
T  37411313 ctgacatgccgacaccgctaataatttgagaaaatc 37411278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 18255991 - 18255945
Alignment:
Q  243 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 289  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||    
T  18255991 gtgtcggtgtcggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 18276493 - 18276570
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 235  Q
    |||||||||  || || ||||| | ||||||||||||||||||||||||||||| || || |||| | |||||||||||    
T  18276493 ccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcact-taattcagtgtaattatgtgt 18276570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 34691816 - 34691770
Alignment:
Q  243 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 289  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34691816 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34691770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 34714228 - 34714182
Alignment:
Q  243 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 289  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34714228 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34714182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 21091706 - 21091747
Alignment:
Q  168 acggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||| |||||||| ||||||||||||||||||| |||||||    
T  21091706 acggacactgacacaccgacaccgctaataatttaagaaaat 21091747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 21624217 - 21624282
Alignment:
Q  136 tatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataattt 201  Q
    |||||||| || |||||||  ||| ||||| ||| || |||||||||||||||| |||||||||||    
T  21624217 tatgaagcccggatacggacaccgaacacgacacagacactgacacgccgacacagctaataattt 21624282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 31018562 - 31018615
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||| ||| || ||| ||||||||||| |||||||||||||||| ||||||||    
T  31018562 ccggatacgacatggacactgacacgccaacaccgctaataatttcagaaaatc 31018615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 896200 - 896236
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  896200 actgacacgccgacactgctaatagtttgagaaaatc 896236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 255
Target Start/End: Original strand, 2331776 - 2331863
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcgg 255  Q
    |||||| | ||||||||  |||||  |||||||||||||||||| | ||| |||| | || |||||||||||||| ||||| |||||||    
T  2331776 cacggacattgacacgcaaacaccattaataatttgagaaaatcac-ataattcagtgtatttatgtgtcggtgtcgtgtcagtgtcgg 2331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 10535842 - 10535794
Alignment:
Q  161 acacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||| ||| |||||| | |||||||||||| |||||||||||||||||    
T  10535842 acacgacacagatactaatacgccgacaccgataataatttgagaaaat 10535794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 28412325 - 28412404
Alignment:
Q  160 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtg 240  Q
    |||||| |||||| ||| ||||| | |||||| ||||||||||| |||||| | ||| |||| | ||||||||||||||||    
T  28412325 gacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcac-ataattcagtgtaattatgtgtcggtg 28412404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 30404936 - 30404884
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| | |||||| |||||||||||||||| | ||||||||||| ||||||    
T  30404936 cggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatc 30404884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 31284041 - 31284073
Alignment:
Q  178 acacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||| ||||||||||||||||||||    
T  31284041 acacgccgacactgctaataatttgagaaaatc 31284073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 38117229 - 38117193
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  38117229 actgacacgccgacacagctaataatttgaaaaaatc 38117193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 290
Target Start/End: Complemental strand, 42511358 - 42511322
Alignment:
Q  254 ggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  42511358 ggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 42832343 - 42832311
Alignment:
Q  177 gacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||| |||||||||||||||||||||||||||    
T  42832343 gacacaccgacaccgctaataatttgagaaaat 42832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 13349 - 13425
Alignment:
Q  134 actatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||| |||||||  ||||| | | |||||| ||||||||||||||||  |||||||||||||||||||    
T  13349 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 13425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 290
Target Start/End: Original strand, 20122 - 20279
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atg 232  Q
    |||||||||||  |||||||  ||||||||| |||||| | |||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |    
T  20122 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaag 20220  T
Q  233 tgtcggtgtggtgtcggtgtcggacatggctaattcgaggagt---gtccgtgcttcatag 290  Q
    |||| |||| |||||||||  ||||| | ||||| ||||||||   |||||||||||||||    
T  20221 tgtcagtgtcgtgtcggtg--ggacacgcctaatccgaggagtacagtccgtgcttcatag 20279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 21978 - 21902
Alignment:
Q  134 actatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||| |||||||  ||||| | | |||||| ||||||||||||||||  |||||||||||||||||||    
T  21978 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 21902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 8039908 - 8039818
Alignment:
Q  171 gatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggacatg 260  Q
    |||| ||||||||| ||||||||||||||||||||||||   |||| |||| | ||||  ||||||||||||| ||||||||||||||||||    
T  8039908 gatattgacacgccaacaccgctaataatttgagaaaat-tatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatg 8039818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 5441119 - 5441029
Alignment:
Q  156 tccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtc 247  Q
    |||||||||| ||| || |||||||||||| ||||||||| |||||||||||||| | ||| |||| |  |||||||||||||||| |||||    
T  5441119 tccggacacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcac-ataattcaatggaattatgtgtcggtgttgtgtc 5441029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 8383231 - 8383282
Alignment:
Q  159 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  8383231 ggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatc 8383282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 5407325 - 5407261
Alignment:
Q  166 gcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat 231  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| | ||| |||||| |||||||    
T  5407325 gcacggataccgacacgccgacaccgctaaaaatttgagaaaatcac-ataattcattgtaattat 5407261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 24205128 - 24205076
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||||| |||||| |||||||||||||||| | |||||||||||||||||    
T  24205128 ccggacacgacacggacactgacacgccgacacggataataatttgagaaaat 24205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 8842280 - 8842346
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataattt 201  Q
    |||||||||||| |||||||  ||||| ||| |||||| | ||||| ||||||||||||||||||||    
T  8842280 ctatgaagcacggatacggacaccggatacgacacggaaattgacatgccgacaccgctaataattt 8842346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 9800014 - 9800064
Alignment:
Q  159 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||| |||| | ||||||||||||||||| ||||||||||||||||||    
T  9800014 ggacacgacacgtacactgacacgccgacacctctaataatttgagaaaat 9800064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 25064881 - 25064981
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcgga 256  Q
    ||||||||| ||| || | ||||||||||||||||||||| |||||| |||||| | ||| || | | ||||||||||| ||| | |||| |||||||||    
T  25064881 ccggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcac-ataatttagtgtaattatgtgttggtatcgtgttggtgtcgga 25064979  T
Q  257 ca 258  Q
    ||    
T  25064980 ca 25064981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 28917973 - 28918026
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| |||||| |||||||||||||||  ||||||||||||| ||||||    
T  28917973 ccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatc 28918026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 2620139 - 2620087
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||| | |||| ||||||||||||||||| ||||| |||||||||||||    
T  2620139 cggacacgactcggacactgacacgccgacaccactaatcatttgagaaaatc 2620087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 4991050 - 4991002
Alignment:
Q  161 acacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||| |||||| |||||||| ||||||||||||||| |||||||||||    
T  4991050 acacgacacggagactgacactccgacaccgctaatagtttgagaaaat 4991002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 26492291 - 26492239
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||| |||||| |||||||||||||||  ||||||||||||| ||||||    
T  26492291 cggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatc 26492239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 10335386 - 10335327
Alignment:
Q  144 acgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttga 203  Q
    ||||| |||||  ||||||||| |||||| ||||||||||||||||  ||||||||||||    
T  10335386 acgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttga 10335327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 21720746 - 21720785
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaa 206  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  21720746 cacggacactgacacgccgacaccgataataatttgagaa 21720785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 55401025 - 55401100
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||  |||||||  ||||| ||| |||||| ||||| ||||||||||  |||||||||||| ||||||    
T  55401025 ctatgaagcacagatacggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatc 55401100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 4466576 - 4466538
Alignment:
Q  254 ggacatggctaattcgaggagtgtccgtgcttcatagtt 292  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  4466576 ggacacggcttattcgaggagtgtccgtgcttcatagtt 4466538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 5440995 - 5440965
Alignment:
Q  262 ctaattcgaggagtgtccgtgcttcatagtt 292  Q
    |||||||||||||||||||||||||||||||    
T  5440995 ctaattcgaggagtgtccgtgcttcatagtt 5440965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 8587129 - 8587055
Alignment:
Q  136 tatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||  |||||||  ||||||| | |||||| ||||||||||||||||  ||| |||||||| ||||||    
T  8587129 tatgaagcacagatacggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatc 8587055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 12674585 - 12674535
Alignment:
Q  160 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||| | |||||| ||||||| ||||||||||||||||||||    
T  12674585 gacacgacacggacattgacacaccgacactgctaataatttgagaaaatc 12674535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 13807237 - 13807275
Alignment:
Q  254 ggacatggctaattcgaggagtgtccgtgcttcatagtt 292  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  13807237 ggacatgcctaattcgaggagtgtccgtgtttcatagtt 13807275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 32429488 - 32429414
Alignment:
Q  136 tatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||| |||||||  ||||||||  |||| | | |||||| |||||| |||||||||||| ||||||||    
T  32429488 tatgaagcacgtatacggacaccggacacaacacgaacattgacactccgacaacgctaataatttaagaaaatc 32429414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 3865633 - 3865592
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaa 208  Q
    |||||| |||||||||||||||| ||||||||||||| ||||    
T  3865633 cacggacactgacacgccgacacagctaataatttgaaaaaa 3865592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 12703989 - 12704030
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaa 208  Q
    ||||||||  |||||||||||||| |||||||||||||||||    
T  12703989 cacggatatggacacgccgacaccactaataatttgagaaaa 12704030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 15796381 - 15796328
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| |||||| | |||||||||||||| | ||||||||||| ||||||    
T  15796381 ccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatc 15796328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 34307846 - 34307794
Alignment:
Q  178 acacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat 231  Q
    |||||| |||||||||||||||||||||||||| | |||||||| | |||||||    
T  34307846 acacgctgacaccgctaataatttgagaaaatcac-atatttcagtgtaattat 34307794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 4987361 - 4987325
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  4987361 actgacacgccgacacagctaataatttgaaaaaatc 4987325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 6525750 - 6525714
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||| | |||||||||||||||||||||||||||    
T  6525750 actgacatgtcgacaccgctaataatttgagaaaatc 6525714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 10318111 - 10318075
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttga 203  Q
    |||||| |||||||||||||||| |||||||||||||    
T  10318111 cacggacactgacacgccgacacagctaataatttga 10318075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 14832080 - 14832124
Alignment:
Q  166 gcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||| |||||||||| || ||||||||||||| ||||||    
T  14832080 gcacggatacggacacgccgatacagctaataatttgaaaaaatc 14832124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 21479107 - 21479143
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  21479107 actgacacgccgacacagctaataatttgaaaaaatc 21479143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 25074781 - 25074813
Alignment:
Q  177 gacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||||||||||| |||||||||||||||||    
T  25074781 gacacgccgacaccgataataatttgagaaaat 25074813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 26290360 - 26290396
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||||  ||||||||||||||||||    
T  26290360 actgacacgccgacaccattaataatttgagaaaatc 26290396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 26508083 - 26508135
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||  || ||||||||||||| ||||| ||||||||||||| ||||||    
T  26508083 cggacacgatacagatactgacacgctgacacagctaataatttgaaaaaatc 26508135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 27505334 - 27505370
Alignment:
Q  254 ggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  27505334 ggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 40052321 - 40052357
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  40052321 actgacacgccgacacagctaataatttgaaaaaatc 40052357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 21018 - 21149
Alignment:
Q  160 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggac 257  Q
    |||||| |||||| ||||||| || ||||| | |||||||||||||||||| | |||  ||  |||||||||  |||||||| | ||||||||||| |||    
T  21018 gacacgacacggacactgacatgctgacacggttaataatttgagaaaatcac-ataagtcggtataattatatgtgtcggtatcgtgtcggtgtcagac 21116  T
Q  258 atggctaattcgaggagtgtccgtgcttcatag 290  Q
    | | ||||| |||| ||| ||||||||||||||    
T  21117 acgcctaatccgagaagtatccgtgcttcatag 21149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 21217 - 21278
Alignment:
Q  229 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||||||| ||||||||||||||    
T  21217 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgaggagtatccgtgcttcatag 21278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 21346 - 21407
Alignment:
Q  229 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||| |||||| |||||||||||    
T  21346 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgagaagtgtctgtgcttcatag 21407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 8770 - 8823
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||    
T  8770 ccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatc 8823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 92790 - 92831
Alignment:
Q  168 acggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaat 92831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 260
Target Start/End: Original strand, 53170 - 53256
Alignment:
Q  175 ctgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg 260  Q
    |||||||||||| ||||| ||||||||||||||||| | ||| |||| | |||||||  |||||||||  ||||||||||||||||||    
T  53170 ctgacacgccgataccgccaataatttgagaaaatcac-ataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatg 53256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 225355 - 225303
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||||| |||||| |||||||||||||||| | |||||||||||||||||    
T  225355 ccggacacgacacggacactgacacgccgacacagataataatttgagaaaat 225303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 241566 - 241668
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcg 254  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||  |||||| | ||| || | | |||||||  |||||||||| |||| |||||||    
T  241566 ccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcac-ataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcg 241664  T
Q  255 gaca 258  Q
    ||||    
T  241665 gaca 241668  T

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Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 35723455 - 35723420
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||||||||||||||||||||||||||||||||    
T  35723455 actgacacgccgacaccgctaataatttgagaaaat 35723420  T

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Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 7670625 - 7670709
Alignment:
Q  129 catatactatgaagcacgaatacggattccggacacggcacggatactgaca---cgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| ||||||||||||||| |||| ||||||||| | |||| |||||||   ||||||||  ||||||| ||||||||||||    
T  7670625 catatagtatgaagcacgaatatggataccggacacgacgcggaaactgacacgtcgccgacattgctaatagtttgagaaaatc 7670709  T

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Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 17345485 - 17345451
Alignment:
Q  174 actgacacgccgacaccgctaataatttgagaaaa 208  Q
    |||||||||||||||||||||||||||||||||||    
T  17345485 actgacacgccgacaccgctaataatttgagaaaa 17345451  T

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Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 23293073 - 23293020
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||||    
T  23293073 ccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatc 23293020  T

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Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 36635296 - 36635349
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| | |||| ||||||||||| ||||| |||||||||||||||||||    
T  36635296 ccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatc 36635349  T

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Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 847923 - 847975
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||||| ||| || |||||||||||||  |||||||||||||||||||||    
T  847923 ccggacacgacacagacactgacacgccgatgccgctaataatttgagaaaat 847975  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 7012048 - 7012090
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    |||||| || ||||||||||||||| |||||||||||||||||    
T  7012048 cacggacaccgacacgccgacaccgataataatttgagaaaat 7012090  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 20521933 - 20521883
Alignment:
Q  160 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||| ||||||    
T  20521933 gacacgacacggacactgacacgccgataccgataataatttgataaaatc 20521883  T

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Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 290
Target Start/End: Original strand, 30298928 - 30299048
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcggacatggcta 264  Q
    |||||| |||||||||||||||| ||||||||||||| ||||  |  ||| |||| | |||||  | |||||||||| ||| ||     ||||| | |||    
T  30298928 cacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccg-----ggacacgtcta 30299022  T
Q  265 attcgaggagtgtccgtgcttcatag 290  Q
    || |||||||||||||||||||||||    
T  30299023 atccgaggagtgtccgtgcttcatag 30299048  T

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Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 290
Target Start/End: Original strand, 30327796 - 30327916
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcggacatggcta 264  Q
    |||||| |||||||||||||||| ||||||||||||| ||||  |  ||| |||| | |||||  | |||||||||| ||| ||     ||||| | |||    
T  30327796 cacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccg-----ggacacgtcta 30327890  T
Q  265 attcgaggagtgtccgtgcttcatag 290  Q
    || |||||||||||||||||||||||    
T  30327891 atccgaggagtgtccgtgcttcatag 30327916  T

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Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 30982935 - 30982863
Alignment:
Q  187 caccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggaca 258  Q
    |||||||||| ||||||||||||| | |||||||| | |||||||  |||||||||| ||||||||||| ||||    
T  30982935 caccgctaatgatttgagaaaatcac-atatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagaca 30982863  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 40613441 - 40613475
Alignment:
Q  176 tgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||||||||||||||||| ||||||||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatc 40613475  T

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Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 1747205 - 1747237
Alignment:
Q  178 acacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||||||||||| |||||||||||    
T  1747205 acacgccgacaccgctaataaattgagaaaatc 1747237  T

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Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 16184801 - 16184842
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| ||||||||||||||  |||||||||||||||||||||    
T  16184801 cacggacactgacacgccgac--cgctaataatttgagaaaatc 16184842  T

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Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 18844467 - 18844423
Alignment:
Q  246 tcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||||||||||| | ||||| |||| ||||||||||||||||||    
T  18844467 tcggtgtcggacacgcctaatccgagaagtgtccgtgcttcatag 18844423  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 20633468 - 20633508
Alignment:
Q  168 acggatactgacacgccgacaccgctaataatttgagaaaa 208  Q
    ||||| ||||||||| |||||||||||||||||||| ||||    
T  20633468 acggacactgacacgtcgacaccgctaataatttgaaaaaa 20633508  T

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Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 24343479 - 24343531
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||||| ||||||  | ||||||||||||| | |||||||||||||||||    
T  24343479 ccggacacgacacggacgccgacacgccgacacggataataatttgagaaaat 24343531  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 28470448 - 28470484
Alignment:
Q  254 ggacatggctaattcgaggagtgtccgtgcttcatag 290  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  28470448 ggacatgcctaatccgaggagtgtccgtgcttcatag 28470484  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 178906 - 178853
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||| |||||| ||||||||||||||||  |||||||||||| ||||||    
T  178906 ccggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 178853  T

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Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 192325 - 192284
Alignment:
Q  168 acggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  192325 acggacactgacacgccgacaccgttaataatttgagaaaat 192284  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 51793 - 51836
Alignment:
Q  167 cacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  51793 cacggacactgacacgccgacacagctaataatttgaaaaaatc 51836  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 90793 - 90868
Alignment:
Q  135 ctatgaagcacgaatacggattccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||| |||| ||||||||| | ||||||| ||| || |||||||| || |||||  ||||||||||||||||||    
T  90793 ctatgatgcacaaatacggatactggacacgacacagacactgacacaccaacaccattaataatttgagaaaatc 90868  T

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Target: scaffold0697 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 1636 - 1669
Alignment:
Q  177 gacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||||||||||||| ||||||||||||||||||    
T  1636 gacacgccgacaccgttaataatttgagaaaatc 1669  T

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Target: scaffold0652 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 545 - 496
Alignment:
Q  161 acacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    ||||| |||||| ||||| |||||||||| ||||||||||||| ||||||    
T  545 acacgccacggacactgatacgccgacactgctaataatttgaaaaaatc 496  T

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Target: scaffold0279 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 17936 - 17903
Alignment:
Q  178 acacgccgacaccgctaataatttgagaaaatcg 211  Q
    ||||||| ||||||||||||||||||||||||||    
T  17936 acacgcctacaccgctaataatttgagaaaatcg 17903  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 28830 - 28913
Alignment:
Q  165 ggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 247  Q
    |||||| | ||| |||||||||||||| ||||||||| |||||||||| ||| |||| | ||||  ||||||||||||| |||||    
T  28830 ggcacgaacactaacacgccgacaccgttaataatttaagaaaatcgc-ataattcaatgtaattatatgtgtcggtgttgtgtc 28913  T

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Target: scaffold0475 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 3288 - 3340
Alignment:
Q  157 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 209  Q
    ||||||||| |||||||||||||||| |||||  ||||| ||||| |||||||    
T  3288 ccggacacgacacggatactgacacgtcgacaatgctaacaattttagaaaat 3340  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Complemental strand, 8592 - 8564
Alignment:
Q  262 ctaattcgaggagtgtccgtgcttcatag 290  Q
    |||||||||||||||||||||||||||||    
T  8592 ctaattcgaggagtgtccgtgcttcatag 8564  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 46655 - 46707
Alignment:
Q  158 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 210  Q
    |||||||| |||||| | |||||||||||||| | ||||||||||| ||||||    
T  46655 cggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatc 46707  T

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Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 46731 - 46778
Alignment:
Q  244 tgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 292  Q
    ||||||||||| ||| | ||||| |||||||||||||||||||||||||    
T  46731 tgtcggtgtcg-acacgcctaatccgaggagtgtccgtgcttcatagtt 46778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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