View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17967_high_1 (Length: 535)
Name: NF17967_high_1
Description: NF17967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17967_high_1 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-113; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 232 - 516
Target Start/End: Complemental strand, 3462003 - 3461717
Alignment:
| Q |
232 |
atgtaagaacaattactttgttcatgcacaacaaaagtgcttgtgaaaataagctatttctaagcaagatgattataatagaaagttgttatgagaagag |
331 |
Q |
| |
|
|||| |||||| | ||||||||||||| |||||||||||||| | || ||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3462003 |
atgttagaacagtcactttgttcatgcgcaacaaaagtgcttattaagataagctgtttctaagcaagatgattataacagaaagttgttatgagaagag |
3461904 |
T |
 |
| Q |
332 |
agaataatggagagaattattgtataatgtgaatacttctcattagttttgaagttcacaattacaaagccttttataggcaaaatgattacttgcttgc |
431 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||| | |||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
3461903 |
agaataatggagagaattactgtgtaatgtgaataatgctcattagttatgaagttcacaattacaaagtcttttataggcaaaatggttacttgcttgc |
3461804 |
T |
 |
| Q |
432 |
ta--caagttaactctctaactaataggaaaaattaaaacatacttaaccaaattagttacaaacagttattattaatacactaata |
516 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3461803 |
tatgcaagttaactctctaactaataggaaaaattaaaacaaacttaaccaaattagttacaaacagttattattaatacactaata |
3461717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 101 - 205
Target Start/End: Original strand, 42237204 - 42237309
Alignment:
| Q |
101 |
gacggaagagaagagagacgtcggatggagggtctccggaggaaaa-aggggagaacggtgatgcggccatgaaaggcatcgcacgaccataacaaacat |
199 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||| |||| ||||| ||| |
|
|
| T |
42237204 |
gacggaagaggagagaaacgtcggaaggagggtcgtcggaggaaaaaaggggagaacggtgatgctgccatgaaaggcatcgcaccaccacaacaagcat |
42237303 |
T |
 |
| Q |
200 |
ctacat |
205 |
Q |
| |
|
|||||| |
|
|
| T |
42237304 |
ctacat |
42237309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 237 - 517
Target Start/End: Complemental strand, 43087374 - 43087092
Alignment:
| Q |
237 |
agaacaattactttgttcatgcacaacaaaagtgcttgtgaaaataagctatttctaagcaagatgattataatagaaagttgttatgagaagagagaat |
336 |
Q |
| |
|
|||||||| ||||||||||||| || ||||||||||| | || |||| | |||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
43087374 |
agaacaatcactttgttcatgcgcagcaaaagtgcttattaagataaattgtttctaagcaagatgattataacagaaagttgttatgagaagagagaat |
43087275 |
T |
 |
| Q |
337 |
aatggagagaattattgtataatgtgaatacttctcattagttttgaagttcacaattacaaagccttttataggcaaaatgattacttgcttgc--tac |
434 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |
|
|
| T |
43087274 |
aatggagagaattattgtgtaatgtgaataatgctcattagttatgaagttcacaattacaaagccttttataggcaaaatggttacttgcttgctatac |
43087175 |
T |
 |
| Q |
435 |
aagttaactctctaactaataggaaaaattaaaacatacttaaccaaattagttacaaacagttattattaatacactaataa |
517 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
43087174 |
aagttaactctctaagtaataggaaaaattaaaacaaacttaaccaaattagttacaagcagttattattaatacactaataa |
43087092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 237 - 517
Target Start/End: Complemental strand, 43091045 - 43090763
Alignment:
| Q |
237 |
agaacaattactttgttcatgcacaacaaaagtgcttgtgaaaataagctatttctaagcaagatgattataatagaaagttgttatgagaagagagaat |
336 |
Q |
| |
|
|||||| | ||||||||||||| || ||||||||||| | | ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
43091045 |
agaacagtcactttgttcatgcgcagcaaaagtgcttattatgataagctgtttctaagcaagatgattataacagaaagttgttatgagaagagagaat |
43090946 |
T |
 |
| Q |
337 |
aatggagagaattattgtataatgtgaatacttctcattagttttgaagttcacaattacaaagccttttataggcaaaatgattacttgcttgcta--c |
434 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
43090945 |
aatggaaagaattattgtgtaatgtgaataatgctcattagttatgaagttcacaattacaaagccttttataggcaaaatggttacttgcttgctatgc |
43090846 |
T |
 |
| Q |
435 |
aagttaactctctaactaataggaaaaattaaaacatacttaaccaaattagttacaaacagttattattaatacactaataa |
517 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
43090845 |
aagttaactctctaactaataggaaaaattaaaacaaacttaaccaaattagttacaagcagttattattaatacactaataa |
43090763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 278 - 518
Target Start/End: Complemental strand, 35894647 - 35894404
Alignment:
| Q |
278 |
aaataagctatttctaagcaagatgattataatagaaagttgttatgagaagagagaataatggagagaattattgtataatgtgaatacttctcattag |
377 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| |
|
|
| T |
35894647 |
aaataagcagtttctaagcaagatgattataacagaaagttgttatgagaagagagaataatggagagaattattgtgtaatgtgaataatgctcattag |
35894548 |
T |
 |
| Q |
378 |
ttttgaagttcacaattacaaagccttttataggcaaaatgattacttgcttgcta--caagttaactctctaactaataggaaaaatt-aaaacatact |
474 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| ||||||| |||||| ||| |
|
|
| T |
35894547 |
ttatgaagttcacaattacaaagccttttataggcaaaatggttacttgcttgttatgcaagttaactctctaactaatagaaaaaattaaaaacaaact |
35894448 |
T |
 |
| Q |
475 |
taaccaaattagttacaaacagttattattaatacactaataaa |
518 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
35894447 |
taaccaaattagttacaagcagttattattaatacactgataaa |
35894404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 237 - 516
Target Start/End: Complemental strand, 35898817 - 35898541
Alignment:
| Q |
237 |
agaacaattactttgttcatgcacaacaaaagtgcttgtgaaaataagctatttctaagcaagatgattataatagaaagttgttatgagaagagagaat |
336 |
Q |
| |
|
||||||||||||||||||| ||| |||||||| ||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
35898817 |
agaacaattactttgttcaagca------aagtgcttatgaaaataagcagtttctaagcaagatgattataacataaagttgttatgagaagagagaat |
35898724 |
T |
 |
| Q |
337 |
aatggagagaattattgtataatgtgaatacttctcattagttttgaagttcacaattacaaagccttttataggcaaaatgattacttgcttgcta--c |
434 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | || ||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||| || | |
|
|
| T |
35898723 |
aatggagagaattattgtgtaatgtgaataatgcttattagttatcaagttcacaattacaaagccttttataggcaaaatggttacttgcttgttatgc |
35898624 |
T |
 |
| Q |
435 |
aagttaactctctaactaataggaaaaatt-aaaacatacttaaccaaattagttacaaacagttattattaatacactaata |
516 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||| |||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
35898623 |
aagttaactctctaactaataggacaaattaaaaacaaacttaaccaaattacttacaagcagttattattaatacactaata |
35898541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 237 - 517
Target Start/End: Original strand, 26023150 - 26023433
Alignment:
| Q |
237 |
agaacaattactttgttcatgcacaacaaaagtgcttgtgaaaataagctatttctaagcaagatgattataatagaaa-gttgttatgagaagagagaa |
335 |
Q |
| |
|
|||||||| ||||| ||||||| || ||||||||||| | || ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
26023150 |
agaacaatcactttattcatgcgcagcaaaagtgcttattaagataagctgtttctaagcaagatgattataacagaaaagttgttatgagaagagagaa |
26023249 |
T |
 |
| Q |
336 |
taatggagagaattattgtataatgtgaatacttctcattagttttgaagttcacaattacaaagccttttataggcaaaatgattacttgcttgcta-- |
433 |
Q |
| |
|
||||||| |||||| |||| |||||||||| | |||||||| ||| ||||| ||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
26023250 |
taatggatagaatttttgtgtaatgtgaatgttattcattagtaatgaggttcataattacaaaaccttttataggcaaaatggttacttgcttgctatg |
26023349 |
T |
 |
| Q |
434 |
caagttaactctctaactaataggaaaaattaaaacatacttaaccaaattagttacaaacagttattattaatacactaataa |
517 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||| |||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
26023350 |
caagttaactctctaactaataggaaaattaaaaacaaacttaaccctattagttacatgcagttattattaatacactaataa |
26023433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 32865217 - 32865320
Alignment:
| Q |
103 |
cggaagagaagagagacgtcggatggagggtctccggaggaaaa-aggggagaacggtgatgcggccatgaaaggcatcgcacgaccataacaaacatct |
201 |
Q |
| |
|
|||||||| ||||| |||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||| |||| | ||| ||||| |
|
|
| T |
32865217 |
cggaagaggagagaaacgtcggaaggagggtcgccggaggaaaaaaggggagaacggtaatgcggccatgaaaggcatcgcaccaccacagcaagcatct |
32865316 |
T |
 |
| Q |
202 |
acat |
205 |
Q |
| |
|
|||| |
|
|
| T |
32865317 |
acat |
32865320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 237 - 516
Target Start/End: Original strand, 50778029 - 50778310
Alignment:
| Q |
237 |
agaacaattactttgttcatgcacaacaaaagtgcttgtgaaaataagctatttctaagcaagatgattataatagaaagttgttatgagaagagagaat |
336 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
50778029 |
agaacaattattttgttcatgcacaacaaaagtgcttatgaaaataagcagtttctaagcaagatgattataacagaaagttgttaaaagaagagagaat |
50778128 |
T |
 |
| Q |
337 |
aatggagagaattattgtataatgtgaatacttctcattagttttgaagttcacaattacaaagccttttataggcaaaatgattacttgcttgc--tac |
434 |
Q |
| |
|
||||| |||||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||| | | |
|
|
| T |
50778129 |
aatggggagaattattgtgtaatgtgaatattgctcattagttatgaagttcacaattacaaagccttttataggcaaaatggtcacttgcttgcaatgc |
50778228 |
T |
 |
| Q |
435 |
aagttaactctctaactaataggaaaaattaaaacatacttaaccaaattagttacaaacagttattattaatacactaata |
516 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
50778229 |
aagttaactctctaactaatagaaaaaattaaaacaaacttaaccaaattagttacaagaagttattattaatacactaata |
50778310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 238 - 484
Target Start/End: Original strand, 50781135 - 50781383
Alignment:
| Q |
238 |
gaacaattactttgttcatgcacaacaaaagtgcttgtgaaaataagctatttctaagcaagatgattataatagaaagttgttatgagaagagagaata |
337 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
50781135 |
gaacaattactttgttcatgcacaacaaaagtgcttatgaaaataagcagtttctaagcaagatgattataacagaaagttgttatgagaagagagaata |
50781234 |
T |
 |
| Q |
338 |
atggagagaattattgtataatgtgaatacttctcattagttttgaagttcacaattacaaagccttttataggcaaaatgattacttgcttgcta--ca |
435 |
Q |
| |
|
|||| |||||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |
|
|
| T |
50781235 |
atggggagaattattgtgtaatgtgaatattgctcattagttatgaagttcacaattacaaagccttttatagacaaaatggttacttgcttgctatgca |
50781334 |
T |
 |
| Q |
436 |
agttaactctctaactaataggaaaaattaaaacatacttaaccaaatt |
484 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
50781335 |
agttaactctctaactaataggaaaaactaaaacaaacttaaccaaatt |
50781383 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 101 - 229
Target Start/End: Complemental strand, 27899814 - 27899682
Alignment:
| Q |
101 |
gacggaagagaagagagacgtcggatggagggtctccggaggaaaaaggggagaacggtgatgcggccatgaaaggcatcgcacgaccataacaaacatc |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
27899814 |
gacgaaagagaagagagacgtcggatggagggtctccggaggaaaagggggagaacggtaatgcggccatgaaaggcatcgcaccaccacaacaaacatc |
27899715 |
T |
 |
| Q |
201 |
tacattg----atattgatgattataatcaaaa |
229 |
Q |
| |
|
||||||| |||||||||||||||||||||| |
|
|
| T |
27899714 |
tacattgatacatattgatgattataatcaaaa |
27899682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 29295408 - 29295440
Alignment:
| Q |
237 |
agaacaattactttgttcatgcacaacaaaagt |
269 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
29295408 |
agaacaattactttgttcatgcacaacaaaagt |
29295440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 191; Significance: 1e-103; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 237 - 516
Target Start/End: Original strand, 11748696 - 11748977
Alignment:
| Q |
237 |
agaacaattactttgttcatgcacaacaaaagtgcttgtgaaaataagctatttctaagcaagatgattataatagaaagttgttatgagaagagagaat |
336 |
Q |
| |
|
|||||| | ||||| ||||||| || ||||||||||| | || ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
11748696 |
agaacagtcactttcttcatgcgcatcaaaagtgcttattaagataagctgtttctaagcaagatgattataacagaaaattgttatgagaagagagaat |
11748795 |
T |
 |
| Q |
337 |
aatggagagaattattgtataatgtgaatacttctcattagttttgaagttcacaattacaaagccttttataggcaaaatgattacttgcttgcta--c |
434 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
11748796 |
aatggagagaattattgtgtaatgtgaataatgctcattagttatgaagttcacaattacaaagccttttataggcaaaatggttacttgcttgctatgc |
11748895 |
T |
 |
| Q |
435 |
aagttaactctctaactaataggaaaaattaaaacatacttaaccaaattagttacaaacagttattattaatacactaata |
516 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
11748896 |
aagttaactctctaactaataggaaaaattaaaacaaacttaactaaattagttacaagcagttattattagtacactaata |
11748977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 264 - 516
Target Start/End: Complemental strand, 25810269 - 25810014
Alignment:
| Q |
264 |
aaaagtgcttgtgaaaataagctatttctaagcaagatgattataatagaaa-gttgttatgagaagagagaataatggagagaattattgtataatgtg |
362 |
Q |
| |
|
|||||||||| |||| ||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||| | ||| ||||||||||| ||||||| |
|
|
| T |
25810269 |
aaaagtgcttatgaagataagctatttttaagcaagatgattgaaacagaaaagttgttatgagaagagagaatgagggatagaattattgtgtaatgtg |
25810170 |
T |
 |
| Q |
363 |
aatacttctcattagttttgaagttcacaattacaaagccttttataggcaaaatgattacttgcttgcta--caagttaactctctaactaataggaaa |
460 |
Q |
| |
|
|||| | ||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
25810169 |
aatattattcattagttatgaggttcacaattacaaagccttttataggcaaaatggttacttgcttgctatgcaagttaactctctaactaataggaaa |
25810070 |
T |
 |
| Q |
461 |
aattaaaacatacttaaccaaattagttacaaacagttattattaatacactaata |
516 |
Q |
| |
|
| | |||||| | ||||| | |||||||| | ||||||||||||||||||||||| |
|
|
| T |
25810069 |
attaaaaacaaatttaacaatattagttatatgcagttattattaatacactaata |
25810014 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 21747353 - 21747306
Alignment:
| Q |
158 |
gtgatgcggccatgaaaggcatcgcacgaccataacaaacatctacat |
205 |
Q |
| |
|
||||||||||||||||||||||||||| |||| | ||| ||||||||| |
|
|
| T |
21747353 |
gtgatgcggccatgaaaggcatcgcaccaccacagcaagcatctacat |
21747306 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 144; Significance: 2e-75; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 320 - 516
Target Start/End: Original strand, 43305424 - 43305622
Alignment:
| Q |
320 |
ttatgagaagagagaataatggagagaattattgtataatgtgaatacttctcattagttttgaagttcacaattacaaagccttttataggcaaaatga |
419 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43305424 |
ttatgagaagagagaacaatggagataattattgtgtaatgtgaatattgctcattagttatgaagttcacaattacaaagccttttataggcaaaatgg |
43305523 |
T |
 |
| Q |
420 |
ttacttgcttgcta--caagttaactctctaactaataggaaaaattaaaacatacttaaccaaattagttacaaacagttattattaatacactaata |
516 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
43305524 |
ttacttacttgctatgcaagttaactctctaactaataggaaaaattaaaacaaacttaaccaaattagttacaagcagttattattaatacagtaata |
43305622 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 43305389 - 43305425
Alignment:
| Q |
237 |
agaacaattactttgttcatgcacaacaaaagtgctt |
273 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43305389 |
agaacaattactttgttcatgcacaacaaaagtgctt |
43305425 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 35246997 - 35246892
Alignment:
| Q |
101 |
gacggaagagaagagagacgtcggatggagggtctccggaggaaaaa-ggggagaacggtgatgcggccatgaaaggcatcgcacgaccataacaaacat |
199 |
Q |
| |
|
|||||||||| ||||| || ||||| |||||||| | |||||||||| ||||||||| ||||||||||||||||||||||| ||| |||| | ||| ||| |
|
|
| T |
35246997 |
gacggaagaggagagaaacttcggaaggagggtcgctggaggaaaaaaggggagaacagtgatgcggccatgaaaggcatcacaccaccacagcaagcat |
35246898 |
T |
 |
| Q |
200 |
ctacat |
205 |
Q |
| |
|
|||||| |
|
|
| T |
35246897 |
ctacat |
35246892 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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