View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17969_high_11 (Length: 206)
Name: NF17969_high_11
Description: NF17969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17969_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 45279475 - 45279648
Alignment:
| Q |
15 |
cataggcatctttaggccttgattttttaacaccagtggtagtaaaccatactttgtcagacttataactctcaacataaacactagtgaccttaaccca |
114 |
Q |
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| T |
45279475 |
cataggcatctttaggccttgattttttaacaccagtggtagtaaaccatactttgtcagacttataactctcaacataaacactagtgaccttaaccca |
45279574 |
T |
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| Q |
115 |
cacaagaaccttggtcttcattccatctataacaatgagttttccctttgacaatgttcctttgacgcgatttg |
188 |
Q |
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| T |
45279575 |
cacaagaaccttggtcttcattccatctataacaatgagttttccctttgacaatgttcctttgacgcgatttg |
45279648 |
T |
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