View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17969_low_3 (Length: 452)
Name: NF17969_low_3
Description: NF17969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17969_low_3 |
 | |
|
| [»] scaffold0428 (1 HSPs) |
| | |
|
| [»] scaffold1749 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 394; Significance: 0; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 15 - 436
Target Start/End: Original strand, 31496911 - 31497332
Alignment:
| Q |
15 |
cataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgat |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
31496911 |
cataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgatgttttattgat |
31497010 |
T |
|
| Q |
115 |
gatgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatc |
214 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31497011 |
gatgtaagcaaaatttttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatc |
31497110 |
T |
|
| Q |
215 |
ttcacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagt |
314 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31497111 |
ttcacatcgcatctaacttgatacgacgcaggctatgttgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagt |
31497210 |
T |
|
| Q |
315 |
tgttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagtt |
414 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31497211 |
tgttcgtcgtgattggttagatgtgggtagtaaaatcattatcatttctagagacgagcatatactgaaagagtatggagtggatgaggtttacaaagtt |
31497310 |
T |
|
| Q |
415 |
cctcttttgtattggactaact |
436 |
Q |
| |
|
||||||||| |||||||||||| |
|
|
| T |
31497311 |
cctcttttggattggactaact |
31497332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 17 - 436
Target Start/End: Original strand, 31476960 - 31477379
Alignment:
| Q |
17 |
taggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatga |
116 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| ||||||| | | | | |||| || ||| ||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
31476960 |
taggaatttgtgggatgggtggaatagggaagacaacccttggcatggttctatatgatagaatttctcatcaatttggtgcatgctgttttattgatga |
31477059 |
T |
|
| Q |
117 |
tgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatctt |
216 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||| | ||| |||| |||||||||||| |
|
|
| T |
31477060 |
tgtaagcaaaatgtttagattacatgatgggccactcgatgttcaaaagcaaattctacatcaaactctcggtgaaaatcacaatcagatatgcaatctt |
31477159 |
T |
|
| Q |
217 |
cacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagttg |
316 |
Q |
| |
|
|| |||||||||||||| ||| || |||||||||||||| ||||| |||||||||||||||||||||||||||||||| | |||||||||| || |
|
|
| T |
31477160 |
tccactgcatctaacttgattagacgtagactatgtcgtcaaagggtccttatgatttttgataatgttgataaagttgaacaactggaaaaaataggtg |
31477259 |
T |
|
| Q |
317 |
ttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttcc |
416 |
Q |
| |
|
|| ||||||| ||| |||||| ||| |||||||||||||| ||||||||||||||||||||| |||| | |||||||| ||||| |||||||||||||| |
|
|
| T |
31477260 |
tttgtcgtgaatggctaggtgagggaagtaaaatcattataatttctagagatgagcatatattgaagaattatggagtagatgaagtttacaaagttcc |
31477359 |
T |
|
| Q |
417 |
tcttttgtattggactaact |
436 |
Q |
| |
|
||| ||| |||||||||||| |
|
|
| T |
31477360 |
tctcttggattggactaact |
31477379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 17 - 436
Target Start/End: Original strand, 31502082 - 31502504
Alignment:
| Q |
17 |
taggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatga |
116 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||| ||||||| || | | | |||| || ||| ||| ||||||||| |||||| |||||||| ||||| |
|
|
| T |
31502082 |
taggaatctgtgggatgggtggaatagggaagacaacccttggtagggttctatatgatagaatttctcatcaatttggtgcatgttgttttatcgatga |
31502181 |
T |
|
| Q |
117 |
tgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatctt |
216 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| ||||||| | | |||||||||| |||| |||||||||||| |
|
|
| T |
31502182 |
tgtaagcaaaatgtttagattacatgatggaccacttggtgttcaaaagcaaatactatatcaaacacacggtgaagaacacaatcaaatatgcaatctt |
31502281 |
T |
|
| Q |
217 |
cacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatag--- |
313 |
Q |
| |
|
| |||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
31502282 |
tctactgcatctaacttgattcgacgcaggctatgtcgtcaaagggtccttttgatttttgataatgttgataaagttgaacaactggaaaaaataggtg |
31502381 |
T |
|
| Q |
314 |
-ttgttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaag |
412 |
Q |
| |
|
||| || |||| |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| | |||||||||||| |||||||||| |
|
|
| T |
31502382 |
tgtgtgtgtggtgaatggttaggtg-gggtagtaaaatcattataatttctagagatgagcatatattgaaattttttggagtggatgaagtttacaaag |
31502480 |
T |
|
| Q |
413 |
ttcctcttttgtattggactaact |
436 |
Q |
| |
|
||||||||||| || ||||||||| |
|
|
| T |
31502481 |
ttcctcttttggatcggactaact |
31502504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 31245071 - 31245181
Alignment:
| Q |
17 |
taggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatga |
116 |
Q |
| |
|
|||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||| ||||| |||||||| || |
|
|
| T |
31245071 |
tagggatttgtggaatgggtggaatagggaagactactcttgctactgctttgtatgatagaatctctaatcaatttgatgcttgctgctttattgagga |
31245170 |
T |
|
| Q |
117 |
tgtaagcaaaa |
127 |
Q |
| |
|
|||||| |||| |
|
|
| T |
31245171 |
tgtaagtaaaa |
31245181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 31019882 - 31019772
Alignment:
| Q |
17 |
taggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatga |
116 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| || || ||||||||||| |||| | |||||||| |||||||||||||| | |||||||||||||| |
|
|
| T |
31019882 |
taggaatttgtgggatgggtggaatagggaagacaactctggctactgctttatatggtcaaatctctcatcaatttgatgcacgttgttttattgatga |
31019783 |
T |
|
| Q |
117 |
tgtaagcaaaa |
127 |
Q |
| |
|
| ||||||||| |
|
|
| T |
31019782 |
tctaagcaaaa |
31019772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 31489664 - 31489774
Alignment:
| Q |
17 |
taggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatga |
116 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| || || ||||||||||| |||| | |||||||| |||||||||||||| | |||||||||||||| |
|
|
| T |
31489664 |
taggaatttgtgggatgggtggaatagggaagacaactctggctactgctttatatggtcaaatctctcatcaatttgatgcacgttgttttattgatga |
31489763 |
T |
|
| Q |
117 |
tgtaagcaaaa |
127 |
Q |
| |
|
| ||||||||| |
|
|
| T |
31489764 |
tctaagcaaaa |
31489774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 31029763 - 31029653
Alignment:
| Q |
17 |
taggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatga |
116 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| || || |||||||||| |||| | |||||||| |||||||||||||| | |||||||||||||| |
|
|
| T |
31029763 |
taggaatttgtgggatgggtggaatagggaagacaactctgactactgctttatatggtcaaatctctcatcaatttgatgcacgttgttttattgatga |
31029664 |
T |
|
| Q |
117 |
tgtaagcaaaa |
127 |
Q |
| |
|
| ||||||||| |
|
|
| T |
31029663 |
tctaagcaaaa |
31029653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 275 - 416
Target Start/End: Complemental strand, 31150175 - 31150034
Alignment:
| Q |
275 |
ttgataatgttgataaagttgaacaattagaaaaaatagttgttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagca |
374 |
Q |
| |
|
|||| ||||||||| ||||||||||| | || ||| ||| || |||||| |||||||||| ||| |||| ||||||||| ||||||||||| ||||| |
|
|
| T |
31150175 |
ttgacaatgttgatcaagttgaacaactcgagaaattagccgtgaatcgtgaatggttaggtgcggggagtagaatcattataatttctagagacgagca |
31150076 |
T |
|
| Q |
375 |
tatactgaaagagtatggagtggatgaggtttacaaagttcc |
416 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
31150075 |
tatcttgaaagagtatggagtggatgttgtttacaaagttcc |
31150034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 275 - 436
Target Start/End: Complemental strand, 31159076 - 31158915
Alignment:
| Q |
275 |
ttgataatgttgataaagttgaacaattagaaaaaatagttgttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagca |
374 |
Q |
| |
|
|||||||||||||||||||||||||| | || ||| ||| ||| |||||| || ||||||| || |||| |||| |||| |||||||||||||| || |
|
|
| T |
31159076 |
ttgataatgttgataaagttgaacaacttgataaattagctgtgaatcgtgaatgcttaggtgcagggagtagaatcgttataatttctagagatgaaca |
31158977 |
T |
|
| Q |
375 |
tatactgaaagagtatggagtggatgaggtttacaaagttcctcttttgtattggactaact |
436 |
Q |
| |
|
||| |||||||||||||||| |||| |||||||||||||| || ||| || ||||||||| |
|
|
| T |
31158976 |
tatcttgaaagagtatggagttgatgtagtttacaaagttccactcttgaatgggactaact |
31158915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 321 - 416
Target Start/End: Complemental strand, 31019581 - 31019486
Alignment:
| Q |
321 |
tcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttcc |
416 |
Q |
| |
|
|||||| || |||||||| || |||| ||||||||| |||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||| |
|
|
| T |
31019581 |
tcgtgaatgtttaggtgtagggagtagaatcattataatttctagagatgagcatatcttgaatgagtatggagttgatgaagtttacaaagttcc |
31019486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 31159331 - 31159224
Alignment:
| Q |
17 |
taggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatga |
116 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| || ||| |||||||||| | || || ||||||| ||| |||||||| | | |||||||||||||| |
|
|
| T |
31159331 |
taggaatttgtgggatgggtggaatagggaagacaactcttactactgctttatgtggtagaatctctcatcgatttgatgtacgttgttttattgatga |
31159232 |
T |
|
| Q |
117 |
tgtaagca |
124 |
Q |
| |
|
| |||||| |
|
|
| T |
31159231 |
tctaagca |
31159224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 436
Target Start/End: Original strand, 31489919 - 31490080
Alignment:
| Q |
275 |
ttgataatgttgataaagttgaacaattagaaaaaatagttgttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagca |
374 |
Q |
| |
|
||||||||||||||||||||| |||| | || ||| | | ||| |||||| |||||||||| || |||| ||||||||| |||||| ||||||| || |
|
|
| T |
31489919 |
ttgataatgttgataaagttggacaacttgataaattgggtgtgaatcgtgaatggttaggtgcagggagtagaatcattataatttctggagatgaaca |
31490018 |
T |
|
| Q |
375 |
tatactgaaagagtatggagtggatgaggtttacaaagttcctcttttgtattggactaact |
436 |
Q |
| |
|
||| |||||||||||||||| |||| ||||||| |||||| || ||| ||||||| |||| |
|
|
| T |
31490019 |
tatcttgaaagagtatggagttgatgtagtttacagagttccactcttgaattggaccaact |
31490080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 416
Target Start/End: Complemental strand, 31029440 - 31029367
Alignment:
| Q |
343 |
agtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttcc |
416 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||| |
|
|
| T |
31029440 |
agtagaatcattataatttctagagatgagcatatcttgaatgagtatggagttgatgaagtttacaaagttcc |
31029367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 31034063 - 31033954
Alignment:
| Q |
17 |
taggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatga |
116 |
Q |
| |
|
||||||||| ||| |||||||||||||| ||||| || || ||||||||| | |||| | ||||||| ||||||||||||||||||| || || ||||| |
|
|
| T |
31034063 |
taggaatttatggaatgggaggaataggaaagacgactctagctactgctctttatgacagaatctctcatcaatttgatgcatgctgcttcatcgatga |
31033964 |
T |
|
| Q |
117 |
tgtaagcaaa |
126 |
Q |
| |
|
| |||||||| |
|
|
| T |
31033963 |
tataagcaaa |
31033954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 31482887 - 31482936
Alignment:
| Q |
87 |
tcaatttgatgcatgctgttttattgatgatgtaagcaaaaattttagat |
136 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
31482887 |
tcaattcgatgcatgctgttttattgatgatgtaagcaaaaaatttagat |
31482936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 31150430 - 31150384
Alignment:
| Q |
17 |
taggaatttgtgggatgggaggaatagggaagactacccttgctact |
63 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||| |||||||||||| |
|
|
| T |
31150430 |
taggaatttgtgggatgggtggagtagggaagacaacccttgctact |
31150384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 416
Target Start/End: Complemental strand, 31161492 - 31161342
Alignment:
| Q |
264 |
ccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagttgttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttct |
363 |
Q |
| |
|
|||||| ||| |||| ||||||||| ||||||||||| | |||||| ||| || ||| ||| |||||| ||| ||| |||| ||||||||| | || | |
|
|
| T |
31161492 |
ccttttaattcttgacaatgttgatcaagttgaacaactcgaaaaactagctga--gtcatgaatggttatgtgcggggagtagaatcattataactttt |
31161395 |
T |
|
| Q |
364 |
agagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttcc |
416 |
Q |
| |
|
|||||||||||||| |||||| || || ||||||| || ||||||||||| |
|
|
| T |
31161394 |
agagatgagcatatcttgaaagtgtttgttgtggatgttgtctacaaagttcc |
31161342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 156; Significance: 1e-82; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 16 - 431
Target Start/End: Complemental strand, 33273887 - 33273472
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatg |
115 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||||| ||||| |||| | |||| ||| ||| |||| ||||| ||||||||| |||| |
|
|
| T |
33273887 |
ataggaatttgtggaatgggaggaatagggaagacaacccttgctatggctttatatgatcaaatatctcatcgatttagtgcatcctgttttatagatg |
33273788 |
T |
|
| Q |
116 |
atgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatct |
215 |
Q |
| |
|
|||||||||||| || || |||||||||||| || ||| ||| ||||||||||| |||| |||||||||| |||||||||||| |||||||||| |
|
|
| T |
33273787 |
atgtaagcaaaatttataaattacatgatggtcccctcgatgcacaaaagcaaatcctacttcaaactctcggcatagaacaccatcaaatatgcaatca |
33273688 |
T |
|
| Q |
216 |
tcacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagtt |
315 |
Q |
| |
|
| ||| || | |||| ||||||||| |||||||||||| |||| ||||| ||||| |||||||||| ||| |||||| ||| || |||||||||| | |
|
|
| T |
33273687 |
ttacagcgtaactaatttgatacgaagtaggctatgtcgtgaaagggtccttctgattcttgataatgtggatcaagttgcacagttggaaaaaataggt |
33273588 |
T |
|
| Q |
316 |
gttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttc |
415 |
Q |
| |
|
|| | |||||| |||||||||| ||||||| ||| || |||||||||||||||||||||||| ||||| | ||||||||||||| ||||||||||||| |
|
|
| T |
33273587 |
gtgcatcgtgaatggttaggtgcaggtagtagaattataatcatttctagagatgagcatatattgaaatactatggagtggatgcagtttacaaagttc |
33273488 |
T |
|
| Q |
416 |
ctcttttgtattggac |
431 |
Q |
| |
|
| |||||| ||||||| |
|
|
| T |
33273487 |
cacttttgaattggac |
33273472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 16 - 423
Target Start/End: Original strand, 33642587 - 33642994
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatg |
115 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||||||||| ||||| |||| |||| ||| ||| |||| ||||| ||||||||||||| |
|
|
| T |
33642587 |
ataggaatttgtggaatgggaggaatagggaagacaacccttgctacggctttatatgaccaaatatctcatcgatttagtgcatcatgttttattgatg |
33642686 |
T |
|
| Q |
116 |
atgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatct |
215 |
Q |
| |
|
|||||||||||| || ||||||||||||||| |||||| | | ||||||||||| ||| ||||||||| |||||||||||| |||||||||| |
|
|
| T |
33642687 |
atgtaagcaaaatttatagattacatgatggtccactcgaagcacaaaagcaaatcctatttcaaactcttggcatagaacaccatcaaatatgcaatcg |
33642786 |
T |
|
| Q |
216 |
tcacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagtt |
315 |
Q |
| |
|
| |||| ||| || | |||||||||| |||||| ||||| | | |||| ||||| |||||||||||||| ||||||||||||| |||||||||| | |
|
|
| T |
33642787 |
taacatggcaactgatttgatacgacgtaggctacgtcgtgagaaggcccttctgattcttgataatgttgatcaagttgaacaatttgaaaaaataggt |
33642886 |
T |
|
| Q |
316 |
gttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttc |
415 |
Q |
| |
|
|| |||||||| |||||||||| ||||||| | | ||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||| |
|
|
| T |
33642887 |
gtgcgtcgtgaatggttaggtgcaggtagtatagttattatcatttctagagatgagcatatattgaaagtgtatggagtggatgtagtttacaaagttc |
33642986 |
T |
|
| Q |
416 |
ctcttttg |
423 |
Q |
| |
|
| |||||| |
|
|
| T |
33642987 |
cacttttg |
33642994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 16 - 423
Target Start/End: Original strand, 31560794 - 31561201
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatg |
115 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||||||| ||||||||| |||| ||| ||| |||| ||||| |||||||||||||| |
|
|
| T |
31560794 |
ataggaatttgtggaatgggaggaatagggaagacagcccttgctatgactttgtatggccaaatatctcatcgatttagtgcatcctgttttattgatg |
31560893 |
T |
|
| Q |
116 |
atgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatct |
215 |
Q |
| |
|
|||||||||||| || ||||| | |||||| || ||| ||| ||||||||||| |||| ||||||| || ||||||| |||| |||||||||| |
|
|
| T |
31560894 |
atgtaagcaaaatttatagatcaggtgatggtcccctcgatgcacaaaagcaaatcctacttcaaactgtcggcatagaacacaatcaaatatgcaatca |
31560993 |
T |
|
| Q |
216 |
tcacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagtt |
315 |
Q |
| |
|
| ||| |||| |||| ||||| ||| | | ||||||| | |||| |||| ||||| |||||||||| ||| |||||| |||||| |||||||||| | |
|
|
| T |
31560994 |
ttacagcgcaactaatttgatgcgaataaatctatgtcatgaaagggcccttctgattcttgataatgtagatcaagttggacaattggaaaaaatagct |
31561093 |
T |
|
| Q |
316 |
gttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttc |
415 |
Q |
| |
|
|| |||||||| |||||||||| || |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
31561094 |
gtgcgtcgtgaatggttaggtgcagggagtagaattattatcatttctagagatgagcatatattgaaagagtatggagtggatgtagtttacaaagttc |
31561193 |
T |
|
| Q |
416 |
ctcttttg |
423 |
Q |
| |
|
| |||||| |
|
|
| T |
31561194 |
cacttttg |
31561201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 20 - 431
Target Start/End: Complemental strand, 33402705 - 33402294
Alignment:
| Q |
20 |
gaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatgatgt |
119 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||| ||| |||| |||||||| ||| |||| ||||| |||||| ||||||||||| |
|
|
| T |
33402705 |
gaatttgtggaatgggaggaatagggaagacaacccttgctatgaatttatatggccaaatctctcatcgatttagtgcatcctgtttcattgatgatgt |
33402606 |
T |
|
| Q |
120 |
aagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatcttcac |
219 |
Q |
| |
|
|||||||| || ||||||| ||||||| ||| | ||| ||||||||||| ||||||||||||||| |||||||||||| |||||||||| | || |
|
|
| T |
33402605 |
aagcaaaatttatagattatatgatggcccaattgatgcacaaaagcaaatcctacatcaaactctcggcatagaacaccatcaaatatgcaatcgttac |
33402506 |
T |
|
| Q |
220 |
atcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagttgttc |
319 |
Q |
| |
|
| ||| | | ||||||| || |||||| ||||| ||| ||| |||||||||||||||| ||| ||||||||||||| |||||||||| ||| | |
|
|
| T |
33402505 |
agtgcaattgatttgatacaacgtaggctacgtcgtgaaaaggctcttctgatttttgataatgtggatcaagttgaacaattggaaaaaataggtgtgc |
33402406 |
T |
|
| Q |
320 |
gtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttcctct |
419 |
Q |
| |
|
|||||| || ||||||| |||||||| ||| |||||||||||||||||||| |||||| |||||||||||| |||||| | ||||||||||||| || |
|
|
| T |
33402405 |
atcgtgaatgtttaggtgcgggtagtagaattattatcatttctagagatgaacatatattgaaagagtatgaagtggacgtagtttacaaagttcaact |
33402306 |
T |
|
| Q |
420 |
tttgtattggac |
431 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
33402305 |
tttgaattggac |
33402294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 16 - 423
Target Start/End: Complemental strand, 33390167 - 33389760
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatg |
115 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||| | |||| |||| |||| ||| ||| |||| |||| ||||||||||||| |
|
|
| T |
33390167 |
ataggaatttgtggaatgggaggaatagggaagacaacccttgccatgactttatatgaccaaatatctcatcgatttagtgcaaattgttttattgatg |
33390068 |
T |
|
| Q |
116 |
atgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatct |
215 |
Q |
| |
|
|||||||||||| | ||||||| |||||| || | ||| ||||||||||||||| |||||||||| | | |||||||||| |||||||||| |
|
|
| T |
33390067 |
atgtaagcaaaatatatagattatgtgatggtcctttggatgcacaaaagcaaattctatttcaaactctcgacataaaacaccatcaaatatgcaatcg |
33389968 |
T |
|
| Q |
216 |
tcacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagtt |
315 |
Q |
| |
|
| |||| ||| || | |||||||||| |||||| ||||| ||| | ||| ||||| |||||||||| ||| ||| |||||||| |||||||||| | |
|
|
| T |
33389967 |
ttacattgcaactgatttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaatcggaaaaaatagct |
33389868 |
T |
|
| Q |
316 |
gttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttc |
415 |
Q |
| |
|
|| | |||||| |||||||||| ||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |
|
|
| T |
33389867 |
gtgcatcgtgagtggttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttc |
33389768 |
T |
|
| Q |
416 |
ctcttttg |
423 |
Q |
| |
|
| |||||| |
|
|
| T |
33389767 |
cacttttg |
33389760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 16 - 413
Target Start/End: Complemental strand, 33264744 - 33264347
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatg |
115 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||||||| ||| |||| |||||| | ||| ||||||||||| |||||| ||||||| |
|
|
| T |
33264744 |
ataggaatttgggggatgggaggaatagggaagacaacccttgctatgaatttatatggccaaatctgtcatcgatttgatgcatcctgtttcattgatg |
33264645 |
T |
|
| Q |
116 |
atgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatct |
215 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||| | ||| ||||||||||| |||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
33264644 |
atgtaagcaaaatttttagattacatgatggtccaatagatgcacaaaagcaaatcctacatcaaactcttggcatagaacaccatcaaatatgcaatca |
33264545 |
T |
|
| Q |
216 |
tcacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagtt |
315 |
Q |
| |
|
| | | ||| || | |||||| || |||||| ||||| ||| | |||| | ||| |||||||||| ||| ||||||||||||| |||| ||||| | |
|
|
| T |
33264544 |
ttatagtgcaactgatttgataagaaataggctaagtcgtgaaaagacccttctaattcttgataatgtggatcaagttgaacaattggaaagaataggt |
33264445 |
T |
|
| Q |
316 |
gttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagt |
413 |
Q |
| |
|
|| | |||||| |||||||||| ||||||| |||| |||||||||| |||||||| |||||| ||||||| ||| |||||||| ||||||||||| |
|
|
| T |
33264444 |
gtgcatcgtgaatggttaggtgcaggtagtagaatcgttatcatttcaagagatgaacatatattgaaagaatataaagtggatgtagtttacaaagt |
33264347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 19 - 416
Target Start/End: Complemental strand, 33412045 - 33411648
Alignment:
| Q |
19 |
ggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatgatg |
118 |
Q |
| |
|
||||||||||| ||||| |||||||| ||||| |||||||||| |||| |||| | || ||| |||||||| ||||| |||||||| || |||| |
|
|
| T |
33412045 |
ggaatttgtggaatgggcggaataggaaagacaacccttgctatgactttatatggccagatatctcatcaatttagtgcatcttgttttatagacgatg |
33411946 |
T |
|
| Q |
119 |
taagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatcttca |
218 |
Q |
| |
|
||||||||| || ||||||| ||||||| || ||| ||| |||| |||||| |||| ||||||| || |||||||||||| |||||||||| | | |
|
|
| T |
33411945 |
taagcaaaatttatagattatatgatggtcccctcgatgcacaaaggcaaatcctacttcaaactgtcggcatagaacaccatcaaatatgcaatcgtta |
33411846 |
T |
|
| Q |
219 |
catcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagttgtt |
318 |
Q |
| |
|
|| ||| || | |||||||||| ||| || ||| | ||| |||| |||||||||||||||| ||| ||||||||||||| |||||||||| ||| |
|
|
| T |
33411845 |
cagtgcaactgatttgatacgacgtaggttacgtcatgaaaaggcccttctgatttttgataatgtggatcaagttgaacaattggaaaaaatagctgtg |
33411746 |
T |
|
| Q |
319 |
cgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttcc |
416 |
Q |
| |
|
| |||||| |||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||| |
|
|
| T |
33411745 |
catcgtgaatggttaggtgcgggtagtagaatcgttatcatttctagagatgagcatatattgaaagagtacggagtggatgtagtttacaaagttcc |
33411648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 16 - 416
Target Start/End: Complemental strand, 33306581 - 33306181
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatg |
115 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||||| |||||||||| ||||| |||| |||| ||| ||| |||| ||||| ||| | |||||||| |
|
|
| T |
33306581 |
ataggaatttctggaatgggaggaatagggaagacaacccttgctatggctttatatgaccaaatatctcatcgatttagtgcatcctgctatattgatg |
33306482 |
T |
|
| Q |
116 |
atgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatct |
215 |
Q |
| |
|
|||||| ||||| || ||| ||||||||||| |||||||||| ||||||||||| ||| ||||||||| ||||||||||| ||| |||||| |
|
|
| T |
33306481 |
atgtaaccaaaatttatagtttacatgatggtccactcaatgcacaaaagcaaatcctatttcaaactctaggcatagaacaccatctaataagcaatcg |
33306382 |
T |
|
| Q |
216 |
tcacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagtt |
315 |
Q |
| |
|
| ||| |||| || | |||||||||| |||||| ||||| ||| ||||| ||||| |||||||||| || ||||||||||||| |||||||| | |
|
|
| T |
33306381 |
ttacaacgcaactgatttgatacgacgtaggctacgtcgtgaaaaggtccttctgattcttgataatgtcaatgaagttgaacaattggaaaaaattgca |
33306282 |
T |
|
| Q |
316 |
gttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttc |
415 |
Q |
| |
|
|| | ||| || |||||||||| ||||||| |||| || ||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||| |
|
|
| T |
33306281 |
gtgcatcgcgaatggttaggtgcaggtagtagaatcgttgtcatttctagagatgagcatatattgaaggagtatggagtggatgtattttacaaagttc |
33306182 |
T |
|
| Q |
416 |
c |
416 |
Q |
| |
|
| |
|
|
| T |
33306181 |
c |
33306181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 16 - 416
Target Start/End: Complemental strand, 9168869 - 9168466
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatg |
115 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| || ||||| | | ||| |||| |||| ||| ||| |||| ||||| |||||||||||||| |
|
|
| T |
9168869 |
ataggaatttgtggaatgggaggaatagggaagacaactcttgcaatggttttatatgaccaaatatctcatcgatttagtgcatcctgttttattgatg |
9168770 |
T |
|
| Q |
116 |
atgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatct |
215 |
Q |
| |
|
|| |||| |||| || |||||| |||||||| |||||| ||| ||||||||||| ||| |||||||||| |||||||||||| |||||||||| |
|
|
| T |
9168769 |
atataagtaaaatttatagattgcatgatggcccactcgatgcacaaaagcaaatcttacttcaaactctcggcatagaacaccatcaaatatgcaatcg |
9168670 |
T |
|
| Q |
216 |
tcacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagtt |
315 |
Q |
| |
|
||| || | || |||||| ||| | ||||||||| |||| ||| ||||| |||||||||||||| ||||||||||||| |||||||||| | |
|
|
| T |
9168669 |
ctacagtgccacaaatttgatatgacgtatactatgtcgtgaaagggccctcctgattcttgataatgttgatcaagttgaacaattggaaaaaatagat |
9168570 |
T |
|
| Q |
316 |
gttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggag---tggatgaggtttacaaag |
412 |
Q |
| |
|
|| | |||||| ||||||||||||||||||| ||| |||||| | ||| |||||||||||||| ||||||||||||||| |||||| |||||||||| |
|
|
| T |
9168569 |
gtgcatcgtgaatggttaggtgtgggtagtagaattattatcgtatcttgagatgagcatatattgaaagagtatggagtactggatgtagtttacaaag |
9168470 |
T |
|
| Q |
413 |
ttcc |
416 |
Q |
| |
|
|||| |
|
|
| T |
9168469 |
ttcc |
9168466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 414
Target Start/End: Complemental strand, 33059658 - 33059260
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatg |
115 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || ||||||||||| |||| |||| |||| ||| |||||||| ||||| ||||||||||| | |
|
|
| T |
33059658 |
ataggaatttgtggaatgggaggaatagggaaaacaacccttgctacgactttatatggccaaatatctcatcaatttagtgcatcttgttttattgacg |
33059559 |
T |
|
| Q |
116 |
atgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatct |
215 |
Q |
| |
|
|||||| ||||| || | |||||||||||| |||||| |||| ||||| ||||| ||| |||||||||| ||||||||| || |||||||||| |
|
|
| T |
33059558 |
atgtaaccaaaatttatggattacatgatgatccactcgatgtacaaaaacaaatcctatttcaaactctcggcatagaacaccaacaaatatgcaatcg |
33059459 |
T |
|
| Q |
216 |
tcacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagtt |
315 |
Q |
| |
|
| || ||| ||| ||||||| | | |||||||| | |||| | |||| ||||| |||||||||| || ||||||||||||| || ||||||| |
|
|
| T |
33059458 |
ttaccatgcaactactttgatacaaaggaagctatgtcatgaaagaacccttatgattcttgataatgtggaccaagttgaacaattggagaaaatagcg |
33059359 |
T |
|
| Q |
316 |
gttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagtt |
414 |
Q |
| |
|
|| | |||||| ||||||||| ||||||| ||| |||||||||||||||||||||||| || |||||| |||||||||||||| |||||||||||| |
|
|
| T |
33059358 |
gtgcatcgtgaatggttaggtccaggtagtagaattattatcatttctagagatgagcatgtattgaaagcgtatggagtggatgtagtttacaaagtt |
33059260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 430
Target Start/End: Complemental strand, 33287637 - 33287223
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatg |
115 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || |||||| ||| ||||| |||| | |||| || ||| |||| || || ||||||||||| | |
|
|
| T |
33287637 |
ataggaatttgtggaatgggaggaatagggaaaacaaccctttctatggctttatatgatcaaatatcccatcgatttagtggatcttgttttattgaag |
33287538 |
T |
|
| Q |
116 |
atgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatct |
215 |
Q |
| |
|
|||| |||||| ||||||||||||||||| || ||| ||| |||||| |||| |||| |||||| || |||| |||||||||||||||||| |
|
|
| T |
33287537 |
atgttgccaaaaaatttagattacatgatggtcccctcgatgcacaaaaggaaatcctacttcaaaccgtcggaatagaagaccatcatatatgcaatcg |
33287438 |
T |
|
| Q |
216 |
tcacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagtt |
315 |
Q |
| |
|
|||| ||| |||| ||||||| | |||||| ||||| |||| |||| | ||| |||||||||| ||| |||||||||||| |||||||||| | |
|
|
| T |
33287437 |
tcaccgtgcaactaatttgatacaaagtaggctacgtcgtgaaagggcccttcttattcttgataatgtagatcgagttgaacaattggaaaaaataggt |
33287338 |
T |
|
| Q |
316 |
gttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttc |
415 |
Q |
| |
|
|| | |||||| || ||||| || ||||||| ||| ||||||||||||||||||||||||||| || |||||||||||||||||| || |||||||||| |
|
|
| T |
33287337 |
gtgcatcgtgaatgtttaggcgtaggtagtagaattattatcatttctagagatgagcatatattggaagagtatggagtggatgtagtctacaaagttc |
33287238 |
T |
|
| Q |
416 |
ctcttttgtattgga |
430 |
Q |
| |
|
| || ||| |||||| |
|
|
| T |
33287237 |
cactcttggattgga |
33287223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 335
Target Start/End: Original strand, 31567113 - 31567432
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatg |
115 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| |||||||| |||| |||| |||| ||| ||| |||| ||||| |||| |||||||| |
|
|
| T |
31567113 |
ataggaatttgtggaatggggggaatagggaagacagcccttgctgagactttatatggccaaatatctcatcgatttagtgcatcttgttatattgatg |
31567212 |
T |
|
| Q |
116 |
atgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatct |
215 |
Q |
| |
|
|||||||||||| || ||||| | ||||||| || ||| ||| ||||||||||| |||| ||||||| | ||| ||||| || |||||||||| |
|
|
| T |
31567213 |
atgtaagcaaaatttatagatcatatgatggtcccctcgatgcacaaaagcaaatcctacttcaaactgttggcatagatcaccaacaaatatgcaatca |
31567312 |
T |
|
| Q |
216 |
tcacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagtt |
315 |
Q |
| |
|
| ||| ||| |||| ||||||||| |||||||||||| |||| |||| ||||| |||| ||||| ||| ||||||||||| | |||||||||||| |
|
|
| T |
31567313 |
ttacagcgccactaatttgatacgaagaaggctatgtcgtgaaagggcccttctgattcttgaaaatgtagatcaagttgaacaaatggaaaaaatagtt |
31567412 |
T |
|
| Q |
316 |
gttcgtcgtgattggttagg |
335 |
Q |
| |
|
|| |||||||| |||||||| |
|
|
| T |
31567413 |
gtgcgtcgtgaatggttagg |
31567432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 33360174 - 33360003
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatg |
115 |
Q |
| |
|
|||||||||||||| || |||||||| ||||| || ||||||||||| |||| |||| |||||||| | |||||| ||||| | ||||||||||| |
|
|
| T |
33360174 |
ataggaatttgtggaattggaggaattgggaaaacaacccttgctacgactttatatggccaaatctctcaccaatttagtgcatctttttttattgatg |
33360075 |
T |
|
| Q |
116 |
atgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctca |
187 |
Q |
| |
|
|||||| |||| || ||| |||||||| |||||| ||| |||||| |||| ||| ||||||||||| |
|
|
| T |
33360074 |
atgtaactaaaatttacagactacatgataatccactcgatgcacaaaagaaaatcctatttcaaactctca |
33360003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 13609122 - 13609224
Alignment:
| Q |
17 |
taggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatga |
116 |
Q |
| |
|
|||| |||||||| ||||| |||||||| ||||| || ||||||| ||||||| ||| |||||| |||||||||| | ||| || ||||||||||| |
|
|
| T |
13609122 |
tagggatttgtggaatgggcggaataggaaagacaactcttgctaaagctttgtgccctagaatctccaatcaatttgctagatgttgctttattgatga |
13609221 |
T |
|
| Q |
117 |
tgt |
119 |
Q |
| |
|
||| |
|
|
| T |
13609222 |
tgt |
13609224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 131; Significance: 8e-68; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 16 - 430
Target Start/End: Original strand, 17438813 - 17439227
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatg |
115 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||| | ||| |||| |||||||| ||| ||||||||||| ||||| ||||||| |
|
|
| T |
17438813 |
ataggaatttgggggatgggaggaatagggaagacaacccttgctttggatttatatggccaaatctctcatcgatttgatgcatcttgtttcattgatg |
17438912 |
T |
|
| Q |
116 |
atgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatct |
215 |
Q |
| |
|
|||||||||||| || ||||||||||||||| ||||| | | ||||||||||| || ||||||||| |||||||||||| |||||||||| |
|
|
| T |
17438913 |
atgtaagcaaaatttatagattacatgatggtccacttgaagcacaaaagcaaatcatatttcaaactcttggcatagaacaccatcaaatatgcaatcg |
17439012 |
T |
|
| Q |
216 |
tcacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagtt |
315 |
Q |
| |
|
| ||| ||| | | |||||||| | || ||||||| | |||| ||| ||||| |||||||||| ||| ||||||||||||| |||||||||| | |
|
|
| T |
17439013 |
ttacagtgcaacatatttgatacggcatagactatgtcatgaaagggcacttctgattcttgataatgtggatcaagttgaacaattggaaaaaatagat |
17439112 |
T |
|
| Q |
316 |
gttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttc |
415 |
Q |
| |
|
|| | || ||| |||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
17439113 |
gtgcatcttgaatggttaggtgcaggtagtagaatcattatcatttctagagatgagcatatattgaaaaagtatggagtggatgtagtttacaaagttc |
17439212 |
T |
|
| Q |
416 |
ctcttttgtattgga |
430 |
Q |
| |
|
| |||||| |||||| |
|
|
| T |
17439213 |
cacttttgaattgga |
17439227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 35054293 - 35054183
Alignment:
| Q |
17 |
taggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatga |
116 |
Q |
| |
|
|||| ||||| ||||||| ||||| || ||||| || ||||| ||| ||||||| || |||||| ||||||||||||| ||||||||||||| | |
|
|
| T |
35054293 |
taggtatttgggggatggctggaatcggaaagacaactcttgcgtctgtcttgtatgatagaatctcctctcaatttgatgcaagctgttttattgagaa |
35054194 |
T |
|
| Q |
117 |
tgtaagcaaaa |
127 |
Q |
| |
|
||||||||||| |
|
|
| T |
35054193 |
tgtaagcaaaa |
35054183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 128; Significance: 5e-66; HSPs: 1)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 16 - 431
Target Start/End: Complemental strand, 8855 - 8440
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatg |
115 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||||||| ||| |||| |||||| | ||| ||||||||||| |||||| ||||||| |
|
|
| T |
8855 |
ataggaatttgggggatgggaggaatagggaagacaacccttgctatgaatttatatggccaaatctgtcatcgatttgatgcatcctgtttcattgatg |
8756 |
T |
|
| Q |
116 |
atgtaagcaaaaattttagattacatgatggaccactcaatgttcaaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatct |
215 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||| | ||| ||||||||||| |||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
8755 |
atgtaagcaaaatttttagattacatgatggtccaattgatgcacaaaagcaaatcctacatcaaactcttggcatagaacaccatcaaatatgcaatca |
8656 |
T |
|
| Q |
216 |
tcacatcgcatctaacttgatacgactcaggctatgtcgtcaaagtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagtt |
315 |
Q |
| |
|
| | | ||| || | |||||| ||| |||||| ||||| ||| | |||| | ||| |||||||||| ||| ||||||||||||| |||| ||||| | |
|
|
| T |
8655 |
ttatagtgcaactgatttgataagacataggctaagtcgtgaaaagacccttctaattcttgataatgtggatcaagttgaacaattggaaagaataggt |
8556 |
T |
|
| Q |
316 |
gttcgtcgtgattggttaggtgtgggtagtaaaatcattatcatttctagagatgagcatatactgaaagagtatggagtggatgaggtttacaaagttc |
415 |
Q |
| |
|
|| | |||||| |||||||||| ||||||| |||| |||||||||| |||||||| |||||| ||||||| ||| |||||||| ||||||||||||| |
|
|
| T |
8555 |
gtgcatcgtgaatggttaggtgcaggtagtagaatcgttatcatttcaagagatgaacatatattgaaagaatataaagtggatgtagtttacaaagttc |
8456 |
T |
|
| Q |
416 |
ctcttttgtattggac |
431 |
Q |
| |
|
| || ||| ||||||| |
|
|
| T |
8455 |
cactgttggattggac |
8440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1749 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1749
Description:
Target: scaffold1749; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 94 - 49
Alignment:
| Q |
16 |
ataggaatttgtgggatgggaggaatagggaagactacccttgcta |
61 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
94 |
ataggaatttgggggatgggaggaatagggaagacaacccttgcta |
49 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 17599418 - 17599309
Alignment:
| Q |
17 |
taggaatttgtgggatgggaggaatagggaagactacccttgctactgctttgtatgctaaaatctctaatcaatttgatgcatgctgttttattgatga |
116 |
Q |
| |
|
|||| |||||||| ||| | ||||||||||| |||| |||| || |||||||||||||| ||||| ||||||||||| ||| || || ||||| || || |
|
|
| T |
17599418 |
tagggatttgtggaatgagttgaatagggaaggctactcttgttaatgctttgtatgctagaatctgtaatcaatttgttgcttg-tgctttatcgacga |
17599320 |
T |
|
| Q |
117 |
tgtaagcaaaa |
127 |
Q |
| |
|
|||||| |||| |
|
|
| T |
17599319 |
tgtaagtaaaa |
17599309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 14724397 - 14724432
Alignment:
| Q |
63 |
tgctttgtatgctaaaatctctaatcaatttgatgc |
98 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |
|
|
| T |
14724397 |
tgctttgtatgctagaatctctaatcaatttgatgc |
14724432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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