View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17971_high_45 (Length: 232)
Name: NF17971_high_45
Description: NF17971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17971_high_45 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 21481138 - 21480914
Alignment:
| Q |
1 |
catttgtaactttgattttgaagttcatagaaaatcatggtgcagatgaaacaataaagaatattttcgtgtattgatcttgagatttttt-----ataa |
95 |
Q |
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| T |
21481138 |
catttgtaactttgattttgaagttcatagaaaatcatggtgcagatgaaacaataaagaatattttcgtgtattgatcttgagatttttttatatataa |
21481039 |
T |
|
| Q |
96 |
aattgttaacaaattgcatattttattaatttgtcgagagaaaaatcttataatttatttttgagcaattctgtaggcagttttaaaaaataccttacaa |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||| ||||||||||| |
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| T |
21481038 |
aattgttaacaaattgcatattttattaatttgtcgagagaaaaatcttataatttatttttgagtaattctgtaggcaattgtaaaagataccttacaa |
21480939 |
T |
|
| Q |
196 |
tagatgtaagaattttatatatatt |
220 |
Q |
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||||||||||||||||||||||||| |
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| T |
21480938 |
tagatgtaagaattttatatatatt |
21480914 |
T |
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