View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17971_low_39 (Length: 255)
Name: NF17971_low_39
Description: NF17971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17971_low_39 |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 33612666 - 33612906
Alignment:
| Q |
1 |
ctggatgacctattcccacccctaattgcaatgcagcataagttttatagaaatctattagatgggatttgtattctactatttttcttgccgttgtaat |
100 |
Q |
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| T |
33612666 |
ctggatgacctattctcatccctaattgcattgcagcacaagttttatataaatctattagatgggatttgtattctactatttttcttgccgttgtaat |
33612765 |
T |
|
| Q |
101 |
tttgcgttttgtggtaatgcagtagttaattttgtctatcggatgcatccactagcattatatttttgtaattggtctgcatcttactttctttaatttg |
200 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33612766 |
tttgcgttttgtggtaatgcaggagttaattttgtctatcggatgcatccactagcattatatttttgtaattggtctgcatcttactttctttaatttg |
33612865 |
T |
|
| Q |
201 |
ctgttaactttgacatttcttgtgactgttagccctttgct |
241 |
Q |
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|||||||||||||||||||||||||||||||||||| |||| |
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| T |
33612866 |
ctgttaactttgacatttcttgtgactgttagccctctgct |
33612906 |
T |
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