View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17971_low_52 (Length: 214)
Name: NF17971_low_52
Description: NF17971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17971_low_52 |
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Alignment Details
Target: chr1 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 46913674 - 46913483
Alignment:
| Q |
1 |
agaagttcatgaagataatcccaatcattagtaacatcaaccacttgttgttgagattgaatcatttcctgcatagaacggaggaaatcaacgtaagggt |
100 |
Q |
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| T |
46913674 |
agaagttcatgaagataatcccaatcgttagtaacatccaccacttgttgttgagattgaatcatttcctgcatagaacggaggaaatcaacgtaagggt |
46913575 |
T |
|
| Q |
101 |
ttacagaatattttggcaccctcttcacactacctcctcttggtatcaacgagttattacagggtagagtgtcgttggagggagactctgtg |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46913574 |
ttacagaatattttggcaccctcttcacactacctcctcttggtatcaacgagttattacagggtagagtgtcgttggagggagactctgtg |
46913483 |
T |
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