View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17972_high_12 (Length: 460)
Name: NF17972_high_12
Description: NF17972
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17972_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 38 - 450
Target Start/End: Original strand, 45477233 - 45477661
Alignment:
| Q |
38 |
tgttttcataatctctatgtatcaaacaatctgagtatatctcacaagtgaatcgaaacatagtctcaataggcaatgagtgacactaacatgataggtt |
137 |
Q |
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| T |
45477233 |
tgttttcataatctctatgtatcaaacaatctgagtatatctcacaagtgaatcgaaacatagtctcaataggcaatgagtgacactaaaatgataggtt |
45477332 |
T |
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| Q |
138 |
aatcgtaatgagagtaaaagagaaacctgctcctttagaatcagctccatgaataagagtgagtgggatcatgagaggttgaggcagcaggggagaggat |
237 |
Q |
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| T |
45477333 |
aatcgtaatgagagtaaaagagaaacctgctcctttagaaacagctccatgaataagagtgagtgggatcatgagaggttgaggcagcaggggagaggat |
45477432 |
T |
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| Q |
238 |
gaaactgaaacgacatcgttatcgttctccaagatataccgaggagatagattttgtgtctgagatctaactgaggaaaaagttactgttattattatca |
337 |
Q |
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| T |
45477433 |
gaaactgaaacgacatcgttatcgttctccaagatataccgaggagatagattttgtgtctgagatctaactgaggaaaaagttactgttattattatca |
45477532 |
T |
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| Q |
338 |
gaataatat---------tcattatttctcagaacagaaccgaagcttcttcaacttcactcacactctcctat-------cctatgtatgtatgtgtgg |
421 |
Q |
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| T |
45477533 |
gaataatattcattcttctcattatttctcagaacagaaccgaagcttcttcaacttcactcacactctcctatgtatgtatgtatgtatgtatgtgtgg |
45477632 |
T |
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| Q |
422 |
tacttgaactggatctttgtcgctctctg |
450 |
Q |
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| T |
45477633 |
tacttgaactggatctttgtcgctctctg |
45477661 |
T |
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