View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17972_high_40 (Length: 282)
Name: NF17972_high_40
Description: NF17972
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17972_high_40 |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 7387074 - 7387323
Alignment:
| Q |
18 |
aagaaacacaaaacaacggaacacatgtttgatgtgaagttcatctaag--tgtgtaggcttgtgacaaaatagtatttgtagtttcgtaattgatatct |
115 |
Q |
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| T |
7387074 |
aagaaacacaaaacagtggaacacatgtttgatgcgaagttcaactaagagtgtgtagacttgtgacaaaatagtatttgtagtttcgtaattgatgtct |
7387173 |
T |
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| Q |
116 |
tatataaatactacggttcaaattacaacaatgcctcttaactatagcgtgaggacctatggcctccacatctccagtcacccctacaacaatcagttgg |
215 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
7387174 |
tatataaatactacggttcaaattacaataatgcctcttaactatagcgtgaggacctatggcctccacatctccggtcacccctacaacaatcagttgg |
7387273 |
T |
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| Q |
216 |
acaaacacaatggtagggccaaagctcactcctctcactcgtctcttatt |
265 |
Q |
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||||||||||||||||||||||||||| ||| ||||||| |||||||||| |
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| T |
7387274 |
acaaacacaatggtagggccaaagctcgctcttctcacttgtctcttatt |
7387323 |
T |
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