View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17972_high_65 (Length: 201)
Name: NF17972_high_65
Description: NF17972
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17972_high_65 |
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Alignment Details
Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 37469957 - 37469789
Alignment:
| Q |
15 |
agcacagaaacaaatataccgtaaacaaatttaagatgataagttggtagaatacgcatagttttgtgaagaaaaatatataattatacaagtgataaag |
114 |
Q |
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| T |
37469957 |
agcacagaaacaaatataccgtaaacaaatttaagatgataagttggtagaataagcatagttttgtgaagaaaaatatataattatacaagtgataaag |
37469858 |
T |
|
| Q |
115 |
aacactcactgaagcgaaatggttcacatcccgatggtgagcctcgtcagcacgaatgactgttataac |
183 |
Q |
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| T |
37469857 |
aacactcactgaagcgaaatggttcacatcccgatggtgagcctcgtcagcacgaatgactgttataac |
37469789 |
T |
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