View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17973_high_21 (Length: 256)
Name: NF17973_high_21
Description: NF17973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17973_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 17500315 - 17500532
Alignment:
| Q |
1 |
atttctggcatatctatctgtcagctatttattcctatttatcaaactcagttagttcttattgcatatctacctctctatctctaatataaagcttgtc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17500315 |
atttctggcatatctatctgtcagctatttattcctatttatcaaactcagttagttcttattgcatatctacctctctatctctaatataaagcttgtc |
17500414 |
T |
|
| Q |
101 |
atcattgttaacattttcaagtataaagagaacaatgtgttacattccaatcttaacattttcaactctactttggagttttgtttgtgtaataagcaag |
200 |
Q |
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|||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
17500415 |
atcattgttaacatttacaagtatgaagagaacaatgtgctacattccaatcttaacattttcaactctactttggagtttggtttgtgtaataagcaag |
17500514 |
T |
|
| Q |
201 |
cctttgttgctctctgct |
218 |
Q |
| |
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|||||||||||||||||| |
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| T |
17500515 |
cctttgttgctctctgct |
17500532 |
T |
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