View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17973_high_23 (Length: 235)
Name: NF17973_high_23
Description: NF17973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17973_high_23 |
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Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 4676944 - 4677163
Alignment:
| Q |
1 |
agttgttgccatttgtttgctatgttgctgctgttgtttggtttcttcttcttcaaattgtttctccatcttttgatcatgattgctactctgcttggnn |
100 |
Q |
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| T |
4676944 |
agttgttgccatttgtttgctatgctgctgctgttgtttggtttcttcttcttcaaattgtttctccatcttttgatcatgattgctactctgcttggtt |
4677043 |
T |
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| Q |
101 |
nnnnnatgtatggaaccagagaggccttcaccttcatatatactacgtacaaaaataatttgtatttgactttcgaaggataggacaattattggctcaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
4677044 |
tttttatgtatggaaccagagaggccttcaccttcatatatactacgtacaaaaataatttgtatttgactttcgaaggataggacaattatgggctcaa |
4677143 |
T |
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| Q |
201 |
tttaatgtttgaggttgttt |
220 |
Q |
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|||||||||||||||||||| |
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| T |
4677144 |
tttaatgtttgaggttgttt |
4677163 |
T |
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