View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17975_high_4 (Length: 278)

Name: NF17975_high_4
Description: NF17975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17975_high_4
NF17975_high_4
[»] chr8 (25 HSPs)
chr8 (16-271)||(43585849-43586104)
chr8 (59-263)||(30644617-30644821)
chr8 (61-271)||(9244068-9244279)
chr8 (61-271)||(26364744-26364955)
chr8 (61-258)||(41638070-41638267)
chr8 (61-271)||(522001-522212)
chr8 (54-271)||(30640794-30641011)
chr8 (61-187)||(26366183-26366309)
chr8 (61-270)||(20309956-20310167)
chr8 (61-270)||(21096589-21096800)
chr8 (61-271)||(43584411-43584622)
chr8 (61-187)||(34642668-34642794)
chr8 (61-271)||(20308926-20309137)
chr8 (61-271)||(21095559-21095770)
chr8 (61-187)||(34643949-34644074)
chr8 (61-271)||(9245335-9245547)
chr8 (61-271)||(41636834-41637045)
chr8 (61-160)||(31202969-31203068)
chr8 (61-134)||(3714562-3714635)
chr8 (61-120)||(22013295-22013354)
chr8 (61-110)||(3713066-3713114)
chr8 (141-170)||(3714586-3714615)
chr8 (218-271)||(22012298-22012351)
chr8 (218-271)||(26366098-26366151)
chr8 (141-170)||(43134115-43134144)
[»] chr3 (69 HSPs)
chr3 (16-271)||(15290394-15290649)
chr3 (61-271)||(28777591-28777802)
chr3 (61-271)||(11346815-11347026)
chr3 (60-187)||(46902333-46902460)
chr3 (55-187)||(35759220-35759352)
chr3 (61-271)||(31937038-31937249)
chr3 (60-263)||(55209784-55209987)
chr3 (61-270)||(10979080-10979290)
chr3 (74-271)||(21729092-21729290)
chr3 (61-187)||(53765955-53766081)
chr3 (61-187)||(54354380-54354506)
chr3 (59-271)||(52521928-52522140)
chr3 (61-271)||(23073278-23073489)
chr3 (61-187)||(2233294-2233420)
chr3 (61-187)||(21727913-21728039)
chr3 (61-187)||(31938296-31938422)
chr3 (61-271)||(43393957-43394169)
chr3 (61-271)||(46903528-46903739)
chr3 (61-187)||(17116205-17116331)
chr3 (61-187)||(23091194-23091320)
chr3 (61-271)||(11348376-11348586)
chr3 (61-271)||(28776451-28776662)
chr3 (61-271)||(37609324-37609535)
chr3 (61-271)||(50881020-50881224)
chr3 (61-187)||(53178704-53178830)
chr3 (61-187)||(54353026-54353152)
chr3 (59-271)||(47431091-47431304)
chr3 (61-184)||(5691087-5691209)
chr3 (68-187)||(17742282-17742401)
chr3 (68-187)||(19043602-19043721)
chr3 (61-187)||(52525348-52525474)
chr3 (61-271)||(5689728-5689933)
chr3 (59-187)||(53764430-53764557)
chr3 (61-270)||(2232605-2232815)
chr3 (61-261)||(53180718-53180918)
chr3 (124-271)||(17740896-17741044)
chr3 (124-271)||(19042216-19042364)
chr3 (64-187)||(47917602-47917724)
chr3 (62-170)||(43392630-43392738)
chr3 (141-271)||(37610667-37610798)
chr3 (61-193)||(46986074-46986205)
chr3 (61-187)||(17117390-17117514)
chr3 (59-170)||(23072061-23072171)
chr3 (61-120)||(34014511-34014570)
chr3 (141-187)||(35758087-35758133)
chr3 (61-187)||(47429630-47429749)
chr3 (59-99)||(37610803-37610843)
chr3 (61-187)||(33113307-33113425)
chr3 (61-126)||(53101823-53101888)
chr3 (61-108)||(24376496-24376543)
chr3 (141-187)||(55210897-55210943)
chr3 (202-271)||(35759135-35759204)
chr3 (218-271)||(43392767-43392820)
chr3 (77-134)||(50879513-50879570)
chr3 (68-108)||(35758074-35758114)
chr3 (207-271)||(35758154-35758218)
chr3 (61-115)||(34015829-34015883)
chr3 (153-187)||(50879782-50879816)
chr3 (146-187)||(10978093-10978134)
chr3 (141-170)||(34014531-34014560)
chr3 (218-271)||(46902492-46902545)
chr3 (218-271)||(47429783-47429836)
chr3 (141-170)||(50879517-50879546)
chr3 (218-271)||(50879848-50879901)
chr3 (211-263)||(21728064-21728116)
chr3 (141-169)||(24376495-24376523)
chr3 (202-258)||(31938224-31938280)
chr3 (61-101)||(44116761-44116801)
chr3 (207-271)||(55210812-55210876)
[»] chr7 (66 HSPs)
chr7 (61-271)||(9391522-9391733)
chr7 (61-271)||(19217630-19217841)
chr7 (61-271)||(18788464-18788675)
chr7 (59-262)||(44746727-44746931)
chr7 (61-271)||(29186667-29186878)
chr7 (61-271)||(43962473-43962684)
chr7 (61-187)||(13750625-13750751)
chr7 (61-187)||(18787151-18787277)
chr7 (61-187)||(44417460-44417586)
chr7 (61-187)||(27072643-27072769)
chr7 (61-187)||(27205544-27205670)
chr7 (61-187)||(43113677-43113803)
chr7 (61-187)||(48792446-48792572)
chr7 (61-187)||(48793505-48793631)
chr7 (54-187)||(3537422-3537555)
chr7 (61-187)||(9392804-9392930)
chr7 (61-263)||(7011636-7011840)
chr7 (61-263)||(7026994-7027198)
chr7 (63-263)||(32519661-32519862)
chr7 (61-186)||(37235816-37235941)
chr7 (61-187)||(29188019-29188145)
chr7 (61-187)||(44420511-44420637)
chr7 (59-271)||(45399914-45400127)
chr7 (52-184)||(44230421-44230553)
chr7 (63-176)||(32518426-32518539)
chr7 (61-165)||(3538574-3538678)
chr7 (61-184)||(37237219-37237340)
chr7 (50-271)||(13597136-13597357)
chr7 (62-169)||(12630507-12630614)
chr7 (141-271)||(43961016-43961147)
chr7 (141-271)||(44748467-44748598)
chr7 (61-134)||(42611438-42611511)
chr7 (141-271)||(43114991-43115122)
chr7 (61-120)||(44231898-44231957)
chr7 (61-115)||(7057390-7057444)
chr7 (141-187)||(13599247-13599293)
chr7 (61-110)||(26005414-26005463)
chr7 (141-186)||(26005434-26005479)
chr7 (61-134)||(45688870-45688943)
chr7 (79-187)||(12630584-12630693)
chr7 (61-115)||(19008934-19008988)
chr7 (61-115)||(26006804-26006858)
chr7 (61-115)||(27071023-27071077)
chr7 (61-115)||(27207236-27207290)
chr7 (61-99)||(43960948-43960986)
chr7 (218-271)||(13599161-13599214)
chr7 (218-271)||(29187934-29187987)
chr7 (218-271)||(37237132-37237185)
chr7 (218-271)||(44417618-44417671)
chr7 (202-261)||(32518557-32518616)
chr7 (61-115)||(19016758-19016812)
chr7 (217-271)||(44231765-44231819)
chr7 (141-170)||(7057395-7057424)
chr7 (218-271)||(9392719-9392772)
chr7 (61-106)||(13749066-13749111)
chr7 (61-114)||(24653733-24653786)
chr7 (141-170)||(27071043-27071072)
chr7 (141-170)||(27207241-27207270)
chr7 (218-271)||(43113835-43113888)
chr7 (141-170)||(44231908-44231937)
chr7 (141-169)||(3538630-3538658)
chr7 (211-263)||(42611570-42611622)
chr7 (141-169)||(43960968-43960996)
chr7 (211-271)||(44420427-44420486)
chr7 (59-95)||(45398543-45398579)
chr7 (141-169)||(45688890-45688918)
[»] chr5 (25 HSPs)
chr5 (61-193)||(6803607-6803739)
chr5 (61-271)||(12372317-12372528)
chr5 (61-271)||(19228841-19229052)
chr5 (61-187)||(13276822-13276948)
chr5 (61-271)||(19229977-19230188)
chr5 (61-187)||(9081982-9082108)
chr5 (61-187)||(12373710-12373836)
chr5 (61-187)||(18655641-18655767)
chr5 (61-187)||(39349483-39349609)
chr5 (61-260)||(18654299-18654500)
chr5 (61-187)||(39350634-39350760)
chr5 (61-187)||(9083285-9083411)
chr5 (59-263)||(13278143-13278348)
chr5 (61-166)||(8447080-8447185)
chr5 (59-159)||(6801975-6802075)
chr5 (141-263)||(39164139-39164260)
chr5 (141-187)||(4031904-4031950)
chr5 (61-99)||(4031884-4031922)
chr5 (141-271)||(4032929-4033060)
chr5 (220-271)||(6803529-6803580)
chr5 (141-170)||(8447100-8447129)
chr5 (202-271)||(12373621-12373690)
chr5 (61-133)||(25001645-25001717)
chr5 (61-133)||(35952479-35952551)
chr5 (141-169)||(35952503-35952531)
[»] chr4 (36 HSPs)
chr4 (61-271)||(7261447-7261658)
chr4 (61-271)||(38031171-38031382)
chr4 (61-271)||(18091583-18091794)
chr4 (59-187)||(17357852-17357980)
chr4 (61-271)||(10802892-10803103)
chr4 (61-271)||(38032324-38032535)
chr4 (61-187)||(35191820-35191946)
chr4 (61-266)||(8814138-8814343)
chr4 (61-271)||(10804099-10804310)
chr4 (61-271)||(17356364-17356575)
chr4 (61-271)||(22621870-22622081)
chr4 (61-271)||(8815261-8815472)
chr4 (61-187)||(48499367-48499493)
chr4 (61-187)||(56233727-56233853)
chr4 (76-271)||(34095563-34095759)
chr4 (61-187)||(35193185-35193311)
chr4 (61-271)||(56234925-56235135)
chr4 (62-271)||(48501228-48501437)
chr4 (61-164)||(48080273-48080376)
chr4 (60-169)||(48081597-48081706)
chr4 (61-271)||(23757874-23758086)
chr4 (81-271)||(5433311-5433502)
chr4 (89-187)||(22623132-22623230)
chr4 (61-134)||(34122844-34122917)
chr4 (61-134)||(34121302-34121375)
chr4 (211-268)||(36074701-36074758)
chr4 (61-134)||(48463026-48463099)
chr4 (61-97)||(22624389-22624425)
chr4 (211-271)||(35927020-35927080)
chr4 (221-271)||(35925855-35925905)
chr4 (61-176)||(36074793-36074909)
chr4 (61-108)||(48081395-48081442)
chr4 (76-134)||(48081572-48081630)
chr4 (61-114)||(5574203-5574256)
chr4 (141-170)||(34122868-34122897)
chr4 (141-169)||(48463051-48463079)
[»] chr1 (35 HSPs)
chr1 (61-262)||(5488780-5488982)
chr1 (61-271)||(51693150-51693361)
chr1 (61-271)||(52759366-52759577)
chr1 (61-271)||(7110229-7110440)
chr1 (60-187)||(45229592-45229719)
chr1 (68-271)||(7111379-7111583)
chr1 (64-187)||(50484985-50485108)
chr1 (61-187)||(51468342-51468468)
chr1 (61-271)||(52086630-52086839)
chr1 (61-271)||(17244178-17244389)
chr1 (61-187)||(5488504-5488630)
chr1 (66-187)||(45228283-45228404)
chr1 (61-187)||(40187606-40187731)
chr1 (61-187)||(51468890-51469016)
chr1 (62-187)||(47532961-47533086)
chr1 (61-187)||(1823285-1823407)
chr1 (61-187)||(18819265-18819391)
chr1 (61-187)||(17245654-17245779)
chr1 (73-187)||(38235138-38235252)
chr1 (61-186)||(50483514-50483638)
chr1 (141-269)||(52761502-52761631)
chr1 (61-153)||(25181504-25181596)
chr1 (75-186)||(52087764-52087875)
chr1 (57-262)||(1821908-1822114)
chr1 (61-271)||(47533758-47533969)
chr1 (217-270)||(21203171-21203224)
chr1 (61-120)||(18820812-18820871)
chr1 (61-108)||(52761604-52761651)
chr1 (211-256)||(1823215-1823260)
chr1 (141-170)||(25181524-25181553)
chr1 (218-263)||(51468500-51468545)
chr1 (141-169)||(18820823-18820851)
chr1 (211-271)||(38235054-38235114)
chr1 (218-270)||(45229508-45229560)
chr1 (202-270)||(52087679-52087747)
[»] chr6 (17 HSPs)
chr6 (61-271)||(32713787-32713998)
chr6 (59-271)||(32712356-32712569)
chr6 (61-271)||(32348941-32349152)
chr6 (61-270)||(11801247-11801457)
chr6 (61-271)||(3000697-3000908)
chr6 (61-271)||(34996665-34996876)
chr6 (61-271)||(34995355-34995565)
chr6 (61-271)||(18572888-18573098)
chr6 (61-271)||(32347811-32348022)
chr6 (61-170)||(18574299-18574408)
chr6 (61-184)||(29479186-29479309)
chr6 (61-120)||(29477762-29477821)
chr6 (60-187)||(19383141-19383263)
chr6 (218-263)||(27719896-27719941)
chr6 (202-271)||(19383059-19383127)
chr6 (218-263)||(21095291-21095336)
chr6 (141-169)||(29477782-29477810)
[»] scaffold1425 (2 HSPs)
scaffold1425 (61-187)||(1590-1716)
scaffold1425 (61-187)||(137-263)
[»] scaffold0878 (3 HSPs)
scaffold0878 (61-187)||(3016-3142)
scaffold0878 (141-187)||(1852-1897)
scaffold0878 (211-263)||(2938-2990)
[»] chr2 (16 HSPs)
chr2 (61-187)||(27892325-27892451)
chr2 (61-187)||(38243944-38244070)
chr2 (61-271)||(16602728-16602939)
chr2 (61-187)||(27891109-27891235)
chr2 (61-170)||(16604195-16604304)
chr2 (61-187)||(23832971-23833096)
chr2 (61-187)||(26388221-26388347)
chr2 (61-134)||(23833912-23833985)
chr2 (61-166)||(43814524-43814629)
chr2 (128-187)||(38242953-38243012)
chr2 (61-134)||(5034858-5034931)
chr2 (211-263)||(27892248-27892300)
chr2 (61-120)||(19577382-19577441)
chr2 (141-170)||(5033501-5033530)
chr2 (59-108)||(43814649-43814698)
chr2 (211-271)||(27891260-27891320)
[»] scaffold0141 (2 HSPs)
scaffold0141 (61-187)||(35274-35400)
scaffold0141 (61-267)||(31036-31243)
[»] scaffold0049 (2 HSPs)
scaffold0049 (61-187)||(79412-79538)
scaffold0049 (61-267)||(83569-83776)
[»] scaffold0018 (2 HSPs)
scaffold0018 (61-187)||(25334-25460)
scaffold0018 (218-263)||(25256-25301)
[»] scaffold0026 (3 HSPs)
scaffold0026 (61-164)||(104304-104407)
scaffold0026 (218-271)||(104412-104465)
scaffold0026 (141-170)||(104324-104353)
[»] scaffold0349 (1 HSPs)
scaffold0349 (218-263)||(9318-9363)


Alignment Details
Target: chr8 (Bit Score: 172; Significance: 2e-92; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 271
Target Start/End: Complemental strand, 43586104 - 43585849
Alignment:
Q  16 atttctgtccttcaaaacgaagaattaaggtaataaataaaatgtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |  |||||    
T  43586104 atttctgtccttcaaaacgaagaattaaggtaataaataaaatgtttaattgatctgtcggtcccttaacttatttcttttatttaatttgatctcataa 43586005  T
Q  116 atcttcattttctcaaacatgtttattaacttatttcttttattcaatttggtccaattttgataattttaaacctttnnnnnnnngaccattgaattat 215  Q
     |||| |||||||||||||||| |||||| ||||||| ||||||||||||| ||||||||| |||||||||| |||||        |||||||| |||||    
T  43586004 gtcttaattttctcaaacatgtctattaaattatttcatttattcaatttgatccaattttaataattttaatcctttaaaaaaaagaccattggattat 43585905  T
Q  216 gaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43585904 gaaggtctaccatattttatagtgtatcatcaatacctaatttatttattttcttc 43585849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 263
Target Start/End: Complemental strand, 30644821 - 30644617
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttat 158  Q
    |||||||||||||| |||| |||||| |||||||||||||||| |||||| ||||||||||| | ||||||||||| || | ||||||||||||||||||    
T  30644821 gtttaattgatctgtcggttccttaatttatttcttttatttaatttggtcccataaatcttaactttctcaaacacgtctcttaacttatttcttttat 30644722  T
Q  159 tcaatttggtccaattttgataattttaaacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattt 258  Q
    |||||||| |||||||||||||||||||| ||| |        |||| ||| |||| | |||||||||| |||||||| || |||| ||| |||||||||    
T  30644721 tcaatttgatccaattttgataattttaatcctctaaaaaagagaccgttggattacggaggtctatcaaattttataatggatcaccaacacctaattt 30644622  T
Q  259 attta 263  Q
    |||||    
T  30644621 attta 30644617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 9244068 - 9244279
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||||| |||||| | || | ||||||||||| ||   ||||||||||| ||||||||    
T  9244068 ttaattgatctgctggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttattttattc 9244167  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||| ||||||||||||||||||  ||||         |||| | | |||| | |||||||||| |||||||||||||||| ||| ||||||||||    
T  9244168 aatttggttcaattttgataattttaatcccttaaaaaatgagaccgtaggattacggaggtctatcagattttatagtgtatcaccaacacctaattta 9244267  T
Q  260 tttattttcttc 271  Q
    ||||||||||||    
T  9244268 tttattttcttc 9244279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 26364744 - 26364955
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||  ||||| |||| | |||||||||||  |   ||||||||||||||||||||    
T  26364744 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcctttaacttatttcttttattc 26364843  T
Q  161 aatttggtccaattttgataattttaaacct-ttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||| |||||||||||||||||||| ||| |         |||| ||| ||||   |||||||||| |||||||| ||||||| ||| ||||||||||    
T  26364844 aatttgatccaattttgataattttaatcctctaaaaaaagagaccgttggattacagaggtctatcagattttataatgtatcaccaacacctaattta 26364943  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  26364944 tttagtttcttc 26364955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 258
Target Start/End: Complemental strand, 41638267 - 41638070
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | |||  |  ||||| |||| | ||||||||||||||   ||||||||||||||||||||    
T  41638267 ttaattgatctgccggtcccttaacttatttcttttattcaatttattctcataagtcttaactttctcaaacatgtcctttaacttatttcttttattc 41638168  T
Q  161 aatttggtccaattttgataattttaaacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattt 258  Q
    |||||||||||||||| |||||||||| ||  |        ||| |||| ||||   ||||||||||| ||||||||||||||| ||| |||||||||    
T  41638167 aatttggtccaattttaataattttaatcccctaaaaaagagacaattggattacagaggtctatcatgttttatagtgtatcaccaacacctaattt 41638070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 522212 - 522001
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||| ||||| |||||||||||||||||||||||||| | ||||||||||||| |||| | ||||||||||||||   ||||||||||| ||||||||    
T  522212 ttaattaatctgtcggtcccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacatgtcccttaacttatttattttattc 522113  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||| || |||||||||||||||||  || |         |||  ||| |||| | |||||||||| |||||||||||||||| |||  |||||||||    
T  522112 aatttgatctaattttgataattttaatcccctagaaaaagagactgttggattacggaggtctatcaaattttatagtgtatcaccaacccctaattta 522013  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  522012 tttactttcttc 522001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 271
Target Start/End: Original strand, 30640794 - 30641011
Alignment:
Q  54 aaaatgtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttct 153  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| | |||||| |||||| | || |  || ||||||| | | ||||||||||||||    
T  30640794 aaaatgtttaattgatatgccggtcctttaacttatttcttttattcaatttggtcccataagttttaaccttatcaaacacg-tcattaacttatttct 30640892  T
Q  154 tttattcaatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacc 252  Q
    ||||||||||||| ||||||||| ||||||||||  || |         |||| ||| |||| | |||||||||| |||||||||||||||| ||| |||    
T  30640893 tttattcaatttgatccaattttaataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcaccaacacc 30640992  T
Q  253 taatttatttattttcttc 271  Q
    ||||||||||| |||||||    
T  30640993 taatttatttactttcttc 30641011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 26366309 - 26366183
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||||||| ||||| |||| |  || |||||||||||   |||||||||||||||||||    
T  26366309 ttaattgatctgccgatcctttaacttatttcttttatttaatttggtttcataagtcttaaccttatcaaacatgttccataacttatttcttttattc 26366210  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||||||||| |||| ||||||||||    
T  26366209 aatttggtccatttttaataattttaa 26366183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 270
Target Start/End: Complemental strand, 20310167 - 20309956
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||| ||||||  |||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||   ||||||||||||||||||||    
T  20310167 ttaattaatctgctcgtcccttaacttatttcttttattcattttggtctcataagtcttaagtttctcaaacacgtcccttaacttatttcttttattc 20310068  T
Q  161 aatttggtccaattttgataattttaaaccttt--nnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattt 258  Q
     ||||||| |||||||||||||||||| || ||          |||| ||| ||||||||||||| ||| |||||||||||||||| | | |||||| ||    
T  20310067 gatttggttcaattttgataattttaatcccttagaaaaaaaagaccgttggattatgaaggtctgtcagattttatagtgtatcacctacacctaactt 20309968  T
Q  259 atttattttctt 270  Q
    ||||| ||||||    
T  20309967 atttactttctt 20309956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 270
Target Start/End: Complemental strand, 21096800 - 21096589
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||| ||||||  |||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||   ||||||||||||||||||||    
T  21096800 ttaattaatctgctcgtcccttaacttatttcttttattcattttggtctcataagtcttaagtttctcaaacacgtcccttaacttatttcttttattc 21096701  T
Q  161 aatttggtccaattttgataattttaaaccttt--nnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattt 258  Q
     ||||||| |||||||||||||||||| || ||          |||| ||| ||||||||||||| ||| |||||||||||||||| | | |||||| ||    
T  21096700 gatttggttcaattttgataattttaatcccttagaaaaaaaagaccgttggattatgaaggtctgtcagattttatagtgtatcacctacacctaactt 21096601  T
Q  259 atttattttctt 270  Q
    ||||| ||||||    
T  21096600 atttactttctt 21096589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 43584411 - 43584622
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| |||||| ||||||||||||||||||| | |||| |  ||||| |||| | ||||||||||| ||   ||||||||||||||||||||    
T  43584411 ttaattgatctgtcggtccattaacttatttcttttattcaatttgatctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattc 43584510  T
Q  161 aatttggtccaattttgataattttaaaccttt-nnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||| |||||||||||||||||||| | |||         |||| ||| ||||  || |||||||| |||||||| ||||||| ||||  ||||||||    
T  43584511 aatttgatccaattttgataattttaatcttttaaaaaaagagaccgttggattacaaaagtctatcagattttataatgtatcaccaatgtctaattta 43584610  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  43584611 tttactttcttc 43584622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 34642668 - 34642794
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||||||| |||||||||||||||||||| | ||||||   |||| |||| | ||||||||||| ||   ||||||||||||||||||||    
T  34642668 ttaattgatctgccggtctcttaacttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaacttatttcttttattc 34642767  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||||||  |||||||||||||||||    
T  34642768 aatttggtttaattttgataattttaa 34642794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 20308926 - 20309137
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||  || |||||| | || | ||||||||||| ||   |||| |||||  ||||||||    
T  20308926 ttaattgatctgccggtcccttaacttatttcttttattcaattgagtcccataagttttaactttctcaaacacgtcccttaatttattgtttttattc 20309025  T
Q  161 aatttggtccaattttgataatttt-aaacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||||||||||||||||||||||||| |  || |         |||| ||| || |   |||||||||| |||||||||||||||| ||||||||||||||    
T  20309026 aatttggtccaattttgataattttgatcccctagaaaaagagaccgttggatcactgaggtctatcagattttatagtgtatcaccaatacctaattta 20309125  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  20309126 tttactttcttc 20309137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 21095559 - 21095770
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||  || |||||| | || | ||||||||||| ||   |||| |||||  ||||||||    
T  21095559 ttaattgatctgccggtcccttaacttatttcttttattcaattgagtcccataagttttaactttctcaaacacgtcccttaatttattgtttttattc 21095658  T
Q  161 aatttggtccaattttgataatttt-aaacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||||||||||||||||||||||||| |  || |         |||| ||| || |   |||||||||| |||||||||||||||| ||||||||||||||    
T  21095659 aatttggtccaattttgataattttgatcccctagaaaaagagaccgttggatcactgaggtctatcagattttatagtgtatcaccaatacctaattta 21095758  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  21095759 tttactttcttc 21095770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 34644074 - 34643949
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||| | ||||||||| |||||||||||||||| | |||| | ||||||||||| | |||||||||||  | |||||| ||||||||||||||     
T  34644074 ttaattgatccgtcggtcccttgacttatttcttttattcaatttg-tcccataaatcttaactttctcaaacacctctattaatttatttcttttattt 34643976  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||| || ||||||||||||||||||    
T  34643975 aatttagttcaattttgataattttaa 34643949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 9245547 - 9245335
Alignment:
Q  61 ttaattgatctgccggtccctt-aacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttatt 159  Q
    |||| |||||||||||||| || ||||||||||||||||| | |||||| |||||| |||| | ||||||||||| ||   |||| |||||| |||||||    
T  9245547 ttaaatgatctgccggtccttttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaatttatttattttatt 9245448  T
Q  160 caatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattt 258  Q
    |||||| |||||||||| ||||||||||  || |         |||| ||| |||    |||||||||| |||||||||||||||| ||| |||||||||    
T  9245447 caatttagtccaatttttataattttaatcccctaaaaaaagagaccgttggattgctgaggtctatcagattttatagtgtatcaccaacacctaattt 9245348  T
Q  259 atttattttcttc 271  Q
    ||||| |||||||    
T  9245347 atttactttcttc 9245335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 41636834 - 41637045
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| ||||||||| || |||||||||||| ||| | |||||| |||||| |||| | ||||| ||||| ||   |||| |||||||||||||||    
T  41636834 ttaattgatttgccggtccttttacttatttctttcattcaatttggtcccataagtcttaactttctaaaacacgtcccttaatttatttcttttattc 41636933  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||| ||| ||||||||||  || |         |||| ||| |||| | | |||||||| ||||||| |||||||| ||| ||||||||||    
T  41636934 aatttggtccaacttttataattttaatcccctaaaaaaagagaccgttggattacggaagtctatcagattttatcgtgtatcaccaacacctaattta 41637033  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  41637034 tttactttcttc 41637045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 160
Target Start/End: Original strand, 31202969 - 31203068
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||| ||||| || | ||||||||||||||||||||| | |||||| ||||||||||| | ||||||||||| ||   ||||||||||||||||||||    
T  31202969 ttaattaatctgtcgtttccttaacttatttcttttattcattttggtcccataaatcttaagtttctcaaacacgtcccttaacttatttcttttattc 31203068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 3714635 - 3714562
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaaca 134  Q
    ||||||||||||||||| ||||||||||||||||||||| | |||||| |||||| | || | |||||||||||    
T  3714635 ttaattgatctgccggttccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaaca 3714562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 22013354 - 22013295
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatctt 120  Q
    |||||||| |||| |||||||||||||||||||||  || |||||||| |||||| ||||    
T  22013354 ttaattgaactgctggtcccttaacttatttctttatttcagtttggtcccataactctt 22013295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 3713066 - 3713114
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttc 110  Q
    |||||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  3713066 ttaattgatctgtcggtctcttaa-ttatttcttttatttaatttggttc 3713114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 3714615 - 3714586
Alignment:
Q  141 ttaacttatttcttttattcaatttggtcc 170  Q
    ||||||||||||||||||||||||||||||    
T  3714615 ttaacttatttcttttattcaatttggtcc 3714586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 22012298 - 22012351
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    ||||||| || |||||||||||||||| ||| |||| ||||||||| |||||||    
T  22012298 aggtctaccagattttatagtgtatcaccaacacctgatttatttactttcttc 22012351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 26366151 - 26366098
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||| | |||||||||||||||| ||| || ||||||||||| |||||||    
T  26366151 aggtctattagattttatagtgtatcaccaacacataatttatttactttcttc 26366098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 43134144 - 43134115
Alignment:
Q  141 ttaacttatttcttttattcaatttggtcc 170  Q
    ||||||||||||||||||||||||||||||    
T  43134144 ttaacttatttcttttattcaatttggtcc 43134115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 172; Significance: 2e-92; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 271
Target Start/End: Complemental strand, 15290649 - 15290394
Alignment:
Q  16 atttctgtccttcaaaacgaagaattaaggtaataaataaaatgtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |  |||||    
T  15290649 atttctgtccttcaaaacgaagaattaaggtaataaataaaatgtttaattgatctgtcggtcccttaacttatttcttttatttaatttgatcacataa 15290550  T
Q  116 atcttcattttctcaaacatgtttattaacttatttcttttattcaatttggtccaattttgataattttaaacctttnnnnnnnngaccattgaattat 215  Q
     |||| |||||||||||||||| |||||| ||||||| ||||||||||||| ||||||||| |||||||||| | |||        ||||||||||||||    
T  15290549 gtcttaattttctcaaacatgtctattaaattatttcatttattcaatttgatccaattttaataattttaatcatttaaaaaaaagaccattgaattat 15290450  T
Q  216 gaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15290449 gaaggtctaccatattttatagtgtatcatcaatacctaatttatttattttcttc 15290394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 28777802 - 28777591
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||| | |||| |||| | ||||||||||| ||   |||||| |||||||||||||    
T  28777802 ttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattc 28777703  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| |||||||||||||||||||| ||||||||||    
T  28777702 aatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaattta 28777603  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  28777602 tttactttcttc 28777591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 11346815 - 11347026
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||||||   ||||||||| | ||| ||||||| ||   |||| |||||||||||||||    
T  11346815 ttaattgatctgtcggtcccttaatttatttcttttatttaatttggtcatataaatcttaactttatcaaacacgtgccttaatttatttcttttattc 11346914  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||| ||||||||||||||||||||  || |         |||||||| |||||||||||||| |||||| |||||||||||| ||| ||||||||||    
T  11346915 aatttgttccaattttgataattttaatcccctgaaaagagagaccattggattatgaaggtctaccatattgtatagtgtatcaccaacacctaattta 11347014  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  11347015 tttactttcttc 11347026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 46902333 - 46902460
Alignment:
Q  60 tttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttatt 159  Q
    ||||||||||||| |||||||||||||||||||||||||| | |||||| ||||||||||| | ||||||||||| ||   |||||||||||||||||||    
T  46902333 tttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaacacgtcccttaacttatttcttttatt 46902432  T
Q  160 caatttggtccaattttgataattttaa 187  Q
    ||||||||| ||||||||||||||||||    
T  46902433 caatttggtgcaattttgataattttaa 46902460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 187
Target Start/End: Complemental strand, 35759352 - 35759220
Alignment:
Q  55 aaatgtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttctt 154  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | ||| || |||||| |||| | ||||||||||| ||   |||| |||||||||    
T  35759352 aaatgcttaattgatctgccggtcccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaatttatttctt 35759253  T
Q  155 ttattcaatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||||||||    
T  35759252 ttattcaatttggtccaattttgataattttaa 35759220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 31937038 - 31937249
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| |||||| |||| | ||||||||||| ||   || |||||||| ||||||||    
T  31937038 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttcacttatttattttattc 31937137  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    | |||||||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| |||||||||||||||| ||| |||||||||     
T  31937138 attttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttt 31937237  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  31937238 tttactttcttc 31937249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 263
Target Start/End: Original strand, 55209784 - 55209987
Alignment:
Q  60 tttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttatt 159  Q
    |||||||||||| ||||||||||||||||||||||||||| | ||||||||||||| | || | ||||||||||| ||   |||| ||||||||||||||    
T  55209784 tttaattgatctaccggtcccttaacttatttcttttattcaatttggttccataagttttaactttctcaaacacgtcccttaatttatttcttttatt 55209883  T
Q  160 caatttggtccaattttgataattttaaacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
     ||||||||||||||||||||||||||| ||           |||||||| |||| | |||||||||| | |||||||||||| | ||| ||||||||||    
T  55209884 taatttggtccaattttgataattttaatccacgaaaaaagagaccattggattacggaggtctatcagaatttatagtgtattaccaacacctaattta 55209983  T
Q  260 ttta 263  Q
    ||||    
T  55209984 ttta 55209987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 270
Target Start/End: Complemental strand, 10979290 - 10979080
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||| | ||||||||||| ||   || |||||||||||||||||    
T  10979290 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataaatcttaaatttctcaaacacgtcatttcacttatttcttttattc 10979191  T
Q  161 aatttggtccaattttgataatttta-aacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||| | |||||||||||||||||   |||||        |||||||| |||| | |||| ||||| ||||||  |||||||| ||| | ||||||||    
T  10979190 aatttgattcaattttgataattttagtccctttaaaaaagagaccattggattacggaggtttatcaaattttacggtgtatcaccaacatctaattta 10979091  T
Q  260 tttattttctt 270  Q
    |||| ||||||    
T  10979090 tttactttctt 10979080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 74 - 271
Target Start/End: Complemental strand, 21729290 - 21729092
Alignment:
Q  74 cggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaatttggtccaat 173  Q
    ||||||||||| |||||||||||||| | ||| || |||||| |  | | ||||||||||| ||   |||||||||||||||||||||||||| | ||||    
T  21729290 cggtcccttaatttatttcttttattcaatttagtcccataagttctaactttctcaaacacgtcccttaacttatttcttttattcaatttgattcaat 21729191  T
Q  174 tttgataattttaaacctttnnnnnnnn-gaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||||||||| ||| |         |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||    
T  21729190 tttgataattttaatcctctaaaaaatgagaccattggattatgaaggtctaccatattttatagtgtatcatcaacacctaatttatttactttcttc 21729092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 53766081 - 53765955
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||||| ||| |||| ||||||||||||| ||   ||||||||||||||||||||    
T  53766081 ttaattgatctgcgggtcccttaacttatttcttttattcaatttggttccgtaagtcttaattttctcaaacacgtcccttaacttatttcttttattc 53765982  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||| ||||||||| ||||||||||    
T  53765981 aatttgatccaattttaataattttaa 53765955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 54354506 - 54354380
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| || ||| |||| | ||||||||||| ||   ||||||||||||||| ||||    
T  54354506 ttaattgatctgccggtcccttaacctatttcttttatttaatttggtcccttaagtcttaactttctcaaacacgtcccttaacttatttctttgattc 54354407  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  54354406 aatttggtccaattttgataattttaa 54354380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 59 - 271
Target Start/End: Original strand, 52521928 - 52522140
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttat 158  Q
    ||||||||||||||| ||||||||||||||||||||| ||| | ||||||  |||| ||||| | ||||||||||| ||   || |||||||| ||||||    
T  52521928 gtttaattgatctgctggtcccttaacttatttctttaattcaatttggtctcatagatcttaactttctcaaacacgtcctttcacttatttattttat 52522027  T
Q  159 tcaatttggtccaattttgataattttaaacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattt 258  Q
    ||||||||||||||||||||||| ||||| ||  |        |||  ||| |||| | |||||||||| |||||||||||||||| ||| |||||||||    
T  52522028 tcaatttggtccaattttgataactttaatcccctaaaaaaaagacagttggattacggaggtctatcagattttatagtgtatcaccaacacctaattt 52522127  T
Q  259 atttattttcttc 271  Q
    ||||| |||||||    
T  52522128 atttactttcttc 52522140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 23073489 - 23073278
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||| ||||||||||||||||||| | |||||| ||||||||||| | ||||||||| ||||   ||||||||||||||||||||    
T  23073489 ttaattgatctgccggtcctttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaagatgtcccttaacttatttcttttattc 23073390  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||  |||| ||||||||||||||||||  || |         |||| |||||||| | |||| ||||| ||||||  |||||||| ||| ||||||||||    
T  23073389 aaactggttcaattttgataattttaatcccctaaaaaaagagaccgttgaattacggaggtgtatcaaattttacggtgtatcaccaacacctaattta 23073290  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  23073289 tttactttcttc 23073278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 2233420 - 2233294
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| |||||||||||||||||||||||||| | || |||  ||||| |||| | ||| ||||||||||   ||||||||||||||||||||    
T  2233420 ttaattgatctgtcggtcccttaacttatttcttttattcaattcggtctcataagtcttaactttgtcaaacatgtcccttaacttatttcttttattc 2233321  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  2233320 aatttggtccaattttgataattttaa 2233294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 21727913 - 21728039
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||||  ||||| |||| | ||||||||||||||   ||||||||||||||||||||    
T  21727913 ttaattgatctgccggtcccataacttatttcttttattcaatttggtctcataagtcttaactttctcaaacatgtcccttaacttatttcttttattc 21728012  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||| | ||||||||||||||||||    
T  21728013 aatttgattcaattttgataattttaa 21728039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 31938422 - 31938296
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||   ||||||||||||||||||||    
T  31938422 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattc 31938323  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||| |||||||||| ||||||||||    
T  31938322 aatttagtccaattttaataattttaa 31938296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 43394169 - 43393957
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaactta-tttcttttatt 159  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||| | ||   |||||||| |||||||||||    
T  43394169 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaagacgtcccttaacttattttcttttatt 43394070  T
Q  160 caatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattt 258  Q
    ||| ||||||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| |||||| ||||||||| ||| |||||||||    
T  43394069 caaattggtccaattttgataattttaaccccctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaattt 43393970  T
Q  259 atttattttcttc 271  Q
    ||||| |||||||    
T  43393969 atttactttcttc 43393957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 46903739 - 46903528
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||  | |||||||||||||||||||||||| | |||||| ||||||||||| | ||| ||||||| ||   ||||||||||||||||||||    
T  46903739 ttaattgatctttcagtcccttaacttatttcttttattcaatttggtcccataaatcttaagtttttcaaacacgtcctttaacttatttcttttattc 46903640  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||| |||||||||| |||||||  || |         |||| ||| |||| | |||||||| | |||||||||||||||| ||| ||||||||||    
T  46903639 aatttggtacaattttgatgattttaatcccctaaaaaaaaagaccgttggattacggaggtctattagattttatagtgtatcaccaacacctaattta 46903540  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  46903539 tttactttcttc 46903528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 17116205 - 17116331
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||  ||||| | || | ||||||||||| ||   ||||||||||||||||||||    
T  17116205 ttaattgatctgccgatcccttaacttatttcttttattcaatttggtctcataagtgttaagtttctcaaacacgtcccttaacttatttcttttattc 17116304  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||| ||||||||||||||||||    
T  17116305 aatttggttcaattttgataattttaa 17116331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 23091194 - 23091320
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||  ||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| || | |||||||| |||||||||||    
T  23091194 ttaattgatctgccggtcttttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtctcttaacttaattcttttattc 23091293  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||| ||||||||||||||    
T  23091294 aatttggtccaactttgataattttaa 23091320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 11348586 - 11348376
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||  ||||| | || | ||| ||| |||||||  |||||| ||||||||||||     
T  11348586 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtattaactttatcatacatgttccttaactaatttcttttattt 11348487  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||| ||||||||||||||||||||  ||||         |||| |||||||| | |||||||||| |||||||||| ||||| | | |||||||| |    
T  11348486 aatttgatccaattttgataattttaattccttagaaaaagagaccgttgaattacggaggtctatcagattttatagtatatca-ccacacctaattaa 11348388  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  11348387 tttactttcttc 11348376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 28776451 - 28776662
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||  | |||| |||| |||||| ||||||| | |||| | | ||||||||| ||||||||||||| ||   |||||| |||||||||||||    
T  28776451 ttaattgatctatcagtcctttaatttattttttttattcaatttgatcctataaatcttaattttctcaaacaagtcccttaactgatttcttttattc 28776550  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| |||||||| ||||||||||| ||||||||||    
T  28776551 aatttggtccaattttgataattttaatcccctaaaaacagagaccgttggattacggaggtctatcagattttataatgtatcatcaacacctaattta 28776650  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  28776651 tttactttcttc 28776662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 37609324 - 37609535
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||   |||| |||| | ||||||||||| ||   | ||||||||||||||||||    
T  37609324 ttaattgatctgccggtcctttaacttatttcttttatttaatttggtcatataagtcttaactttctcaaacacgtccctcaacttatttcttttattc 37609423  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||| ||||||||| ||||||||||  || |         |||| ||| |||| | |||||||| | |||| ||||||| ||||||| ||||||||||    
T  37609424 aatttgatccaattttaataattttaatcccctaaaaaaagagaccgttggattagggaggtctataagatttaatagtgtctcatcaacacctaattta 37609523  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  37609524 tttactttcttc 37609535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 50881224 - 50881020
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| || |||||||||||||||||||||||||| | ||||    ||||| |||| | ||||||||||| ||   |||| |||||||||||||||    
T  50881224 ttaattgatgtgtcggtcccttaacttatttcttttattcaatttgaccacataagtcttaactttctcaaacacgtcccttaatttatttcttttattc 50881125  T
Q  161 aatttggtccaattttgataattttaaacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttat 260  Q
    ||||| || |||||||||||||||||| ||  |         |  |||| |||||||||||||| |||||||||||||||| || ||| |||||||||||    
T  50881124 aatttagttcaattttgataattttaatcccctaaa------aaaattggattatgaaggtctaccatattttatagtgtaccaccaacacctaatttat 50881031  T
Q  261 ttattttcttc 271  Q
    |||||||||||    
T  50881030 ttattttcttc 50881020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 53178704 - 53178830
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||| ||||||||||||||| ||||||| | |||| || |||||  ||| | ||||||||||| |||  ||||||||||||||||||||    
T  53178704 ttaattgatctgccgatcccttaacttattttttttattcaatttgatttcataagccttaactttctcaaacacgttccttaacttatttcttttattc 53178803  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||| |||||||||||| |||||||    
T  53178804 aatttgatccaattttgatcattttaa 53178830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 54353026 - 54353152
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| |||||| ||||||||||||||||||| | |||| | |||||| |||| | ||| ||||||||||   ||||||||||||||||| ||    
T  54353026 ttaattgatctgacggtcctttaacttatttcttttattcaatttgatcccataagtcttaactttatcaaacatgtcccttaacttatttcttttactc 54353125  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||| ||||||||||    
T  54353126 aatttggtccaatttttataattttaa 54353152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 271
Target Start/End: Complemental strand, 47431304 - 47431091
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttat 158  Q
    ||||||||||| || | ||||||||| |||||||||||||| | ||||||  ||||| | || | ||| ||||||| |||  |||||||||||||||| |    
T  47431304 gtttaattgatttgtcagtcccttaatttatttcttttattcaatttggtctcataagttttaactttttcaaacacgttccttaacttatttcttttgt 47431205  T
Q  159 tcaatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatt 257  Q
    |||||||||||||||||||||||||||||  || |         |||| ||| |||||| |||||||| | |||||||||||||||| | | ||||||||    
T  47431204 tcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattatggaggtctattagattttatagtgtatcacccacacctaatt 47431105  T
Q  258 tatttattttcttc 271  Q
    |||||| |||||||    
T  47431104 tatttactttcttc 47431091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 61 - 184
Target Start/End: Complemental strand, 5691209 - 5691087
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| ||  ||||| |||| ||||||||||||| ||   |||||||||||||||||||     
T  5691209 ttaattgatctgccggtcccttaacttatttcttttattcaatttagtcacataagtcttaattttctcaaacacgtcccttaacttatttcttttatta 5691110  T
Q  161 aatttggtccaattttgataattt 184  Q
    || || ||||||||||||||||||    
T  5691109 aactt-gtccaattttgataattt 5691087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 17742401 - 17742282
Alignment:
Q  68 atctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaatttgg 167  Q
    |||||||| ||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||   ||||||||||||||||||| ||||||     
T  17742401 atctgccgatcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttga 17742302  T
Q  168 tccaattttgataattttaa 187  Q
    ||||||||||||||||||||    
T  17742301 tccaattttgataattttaa 17742282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 19043721 - 19043602
Alignment:
Q  68 atctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaatttgg 167  Q
    |||||||| ||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||   ||||||||||||||||||| ||||||     
T  19043721 atctgccgatcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttga 19043622  T
Q  168 tccaattttgataattttaa 187  Q
    ||||||||||||||||||||    
T  19043621 tccaattttgataattttaa 19043602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 52525474 - 52525348
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| || |||||||||||||||||||||||||| | ||||||  ||||| |||| | |||||||||||  |   ||||||||||||||||||||    
T  52525474 ttaattgatttgtcggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacatcccttaacttatttcttttattc 52525375  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||| |||||||||| ||||||||||    
T  52525374 aatttagtccaattttaataattttaa 52525348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 5689728 - 5689933
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| || ||||||| ||||||||||||||| | |||||| ||||||        |||| |||||| ||   |||||||||||||||||||     
T  5689728 ttaattgatctgtcgctcccttagcttatttcttttattaaatttggtcccataaga------tttcccaaacacgtcccttaacttatttcttttatta 5689821  T
Q  161 aatttggtccaattttgataattttaaaccttt-nnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||||||||||||||||||||||||||| |||||         |||| ||| |||| | |||||||||| |||||||||||||||| ||| || |||||||    
T  5689822 aatttggtccaattttgataattttaatcctttaaaacaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacttaattta 5689921  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  5689922 tttactttcttc 5689933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 53764430 - 53764557
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttat 158  Q
    ||||||||||||| ||||||| ||||||||||| ||||||| | ||||||  ||||| |||| | ||||||||||| ||   ||||||||||||||||||    
T  53764430 gtttaattgatctaccggtcctttaacttattt-ttttattcaatttggtctcataagtcttaactttctcaaacacgtcctttaacttatttcttttat 53764528  T
Q  159 tcaatttggtccaattttgataattttaa 187  Q
    ||||||| ||| |||||||||||||||||    
T  53764529 tcaatttagtcaaattttgataattttaa 53764557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 61 - 270
Target Start/End: Original strand, 2232605 - 2232815
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||| | ||   |||| |||||||||||||||    
T  2232605 ttaattgatctgccgatcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaatacgtcccttaatttatttcttttattc 2232704  T
Q  161 aatttggtccaattttgataattttaaacctttnnnnnnnn-gaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||  ||||||||| |||||||||| ||  |         |||||||| |||| | |||||||| | ||||||  |||||||| ||| ||||||||||    
T  2232705 aatttaatccaattttaataattttaatcccctagaaaaaaagaccattggattacggaggtctatgagattttacggtgtatcagcaacacctaattta 2232804  T
Q  260 tttattttctt 270  Q
    |||| ||||||    
T  2232805 tttactttctt 2232815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 261
Target Start/End: Complemental strand, 53180918 - 53180718
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| ||||||||||||||||||||| ||||||| | |||| |  ||||| || | | ||||||||||| |||  ||||||||||| ||||||||    
T  53180918 ttaattgatttgccggtcccttaacttattt-ttttattcaatttgatctcataagtcgtaactttctcaaacacgttctttaacttattttttttattc 53180820  T
Q  161 aatttggtccaattttgataattttaaacct-ttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||||| |||||||||| |||||||||| ||| |         |||| ||| |||| | |||||||||| ||| |||||||||||| ||| ||||||||||    
T  53180819 aatttagtccaattttaataattttaatcctctaaaaaaggagaccgttggattacggaggtctatcagattgtatagtgtatcaccaacacctaattta 53180720  T
Q  260 tt 261  Q
    ||    
T  53180719 tt 53180718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 271
Target Start/End: Original strand, 17740896 - 17741044
Alignment:
Q  124 tttctcaaacatgtttattaacttatttcttttattcaatttggtccaattttgataattttaaaccttt-nnnnnnnngaccattgaattatgaaggtc 222  Q
    ||||||||||||||   ||||||||||||||||||| |||||| |||||||||||||||||||| |||||         |||| | | |||| | |||||    
T  17740896 tttctcaaacatgtcccttaacttatttcttttattaaatttgatccaattttgataattttaatcctttaaaaatagagaccgtcggattacggaggtc 17740995  T
Q  223 tatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    ||||| |||||||||||||||| ||| |||||||||||||| |||||||    
T  17740996 tatcagattttatagtgtatcaccaacacctaatttatttactttcttc 17741044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 271
Target Start/End: Original strand, 19042216 - 19042364
Alignment:
Q  124 tttctcaaacatgtttattaacttatttcttttattcaatttggtccaattttgataattttaaaccttt-nnnnnnnngaccattgaattatgaaggtc 222  Q
    ||||||||||||||   ||||||||||||||||||| |||||| |||||||||||||||||||| |||||         |||| | | |||| | |||||    
T  19042216 tttctcaaacatgtcccttaacttatttcttttattaaatttgatccaattttgataattttaatcctttaaaaatagagaccgtcggattacggaggtc 19042315  T
Q  223 tatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    ||||| |||||||||||||||| ||| |||||||||||||| |||||||    
T  19042316 tatcagattttatagtgtatcaccaacacctaatttatttactttcttc 19042364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 47917724 - 47917602
Alignment:
Q  64 attgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaat 163  Q
    ||||||||||||  | |||||||||||||||||||||| ||||||  ||||||||||  |||||||||||| | |   ||||||||||||||||||||||    
T  47917724 attgatctgccgacctcttaacttatttcttttatttaatttggtctcataaatcttagttttctcaaacacg-tccctaacttatttcttttattcaat 47917626  T
Q  164 ttggtccaattttgataattttaa 187  Q
    ||| || |||||| ||||||||||    
T  47917625 ttgatctaattttaataattttaa 47917602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 170
Target Start/End: Original strand, 43392630 - 43392738
Alignment:
Q  62 taattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattca 161  Q
    ||||||||||| |||||||||||||||||||||||||| | ||||||  ||||| |||| | |||||||| || ||   | |||||||||||||||||||    
T  43392630 taattgatctgtcggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaagcacgtccctgaacttatttcttttattca 43392729  T
Q  162 atttggtcc 170  Q
    |||||||||    
T  43392730 atttggtcc 43392738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 37610798 - 37610667
Alignment:
Q  141 ttaacttatttcttttattcaatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtg 239  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| |||||||||||    
T  37610798 ttaacttattttttttattcaatttggtccaattttgataattttaatcccctaaaaaaaaagaccgttggattacggaggtctatcagattttatagtg 37610699  T
Q  240 tatcatcaatacctaatttatttattttcttc 271  Q
    ||||| ||| |||||||||||||| |||||||    
T  37610698 tatcaccaacacctaatttatttactttcttc 37610667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 193
Target Start/End: Complemental strand, 46986205 - 46986074
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| |||||| ||||||| |||||||||||||| | |||||| | |||| |||| | | ||||||||| ||   ||||||||||| | |||||     
T  46986205 ttaattgatttgccggccccttaatttatttcttttattcaatttggtccaataagtcttaactctctcaaacacgtcccttaacttattt-tcttatta 46986107  T
Q  161 aatttggtccaattttgataattttaaaccttt 193  Q
    ||||||||| ||||||||||||||||| |||||    
T  46986106 aatttggtcaaattttgataattttaatccttt 46986074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 17117514 - 17117390
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||   ||||  | ||| ||||||||    
T  17117514 ttaattgatctgtcggtcccttaacttatttcttttattcaatttggtctcataagtcttaagtttctcaaacacgtcccttaa--ttttttttttattc 17117417  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||||| | ||||||||| |||||||    
T  17117416 aatttgggcaaattttgatgattttaa 17117390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 23072061 - 23072171
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttat 158  Q
    ||||||||||||||| |||||||||| | ||||| |||||| | |||||| |||||| |||| | ||||||||| | | |  ||||||||||||||||||    
T  23072061 gtttaattgatctgctggtcccttaattcatttcatttattcaatttggtcccataagtcttaactttctcaaagacg-tccttaacttatttcttttat 23072159  T
Q  159 tcaatttggtcc 170  Q
    ||||||||||||    
T  23072160 tcaatttggtcc 23072171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 120
Target Start/End: Original strand, 34014511 - 34014570
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatctt 120  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||    
T  34014511 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataaatctt 34014570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 35758087 - 35758133
Alignment:
Q  141 ttaacttatttcttttattcaatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  35758087 ttaacttatttcttttattcaatttggtccaattttgataattttaa 35758133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 47429630 - 47429749
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||  |||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||       | | | |||||| |||    
T  47429630 ttaattgatctgcatgtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgt-------cctttatcttttgttc 47429722  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  47429723 aatttggtccaattttgataattttaa 47429749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 37610843 - 37610803
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttttatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37610843 gtttaattgatctgccggtcccttaacttatttcttttatt 37610803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 33113425 - 33113307
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttc-ttttatt 159  Q
    ||||||||||| ||| |||||||| |||||||||||||| | |||||||         || | ||| ||||||| ||   |||||||||||| |||||||    
T  33113425 ttaattgatctaccgatcccttaatttatttcttttattcaatttggtt---------ttaactttttcaaacacgtcccttaacttatttctttttatt 33113335  T
Q  160 caatttggtccaattttgataattttaa 187  Q
    ||||||||||||||||||||||||||||    
T  33113334 caatttggtccaattttgataattttaa 33113307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 53101888 - 53101823
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcatttt 126  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||| | |||| |||| |||||    
T  53101888 ttaattgatctgccggtcccttaagttatttcttttattcaatttggtcctataattcttaatttt 53101823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 24376543 - 24376496
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggt 108  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  24376543 ttaattgatctgccggtcctttaacttatttcttttattcaatttggt 24376496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 55210943 - 55210897
Alignment:
Q  141 ttaacttatttcttttattcaatttggtccaattttgataattttaa 187  Q
    ||||||||||||||||||| |||||||  ||||||||||||||||||    
T  55210943 ttaacttatttcttttattaaatttggatcaattttgataattttaa 55210897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 35759204 - 35759135
Alignment:
Q  202 gaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||| ||| |||| ||| |||||||| |||||| ||||||||| ||| |||||||||||||| |||||||    
T  35759204 gaccgttggattacgaatgtctatcagattttacagtgtatcaccaacacctaatttatttactttcttc 35759135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 43392767 - 43392820
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||||| ||||||||||||| || ||| ||| ||||||||||||||||||    
T  43392767 aggtctatcagattttatagtgtaccaccaacaccaaatttatttattttcttc 43392820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 50879513 - 50879570
Alignment:
Q  77 tcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaaca 134  Q
    ||||||||||||||||||||||| | |||||| ||||||||||| | ||||| |||||    
T  50879513 tcccttaacttatttcttttattcaatttggtcccataaatcttaactttcttaaaca 50879570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 35758074 - 35758114
Alignment:
Q  68 atctgccggtcccttaacttatttcttttatttagtttggt 108  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  35758074 atctgccggtcccttaacttatttcttttattcaatttggt 35758114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 35758154 - 35758218
Alignment:
Q  207 ttgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    ||| |||| ||| |||||||| |||||| ||||||||| ||| |||||||||||||| |||||||    
T  35758154 ttggattacgaatgtctatcagattttacagtgtatcaccaacacctaatttatttactttcttc 35758218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 34015883 - 34015829
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataa 115  Q
    ||||||||| || ||||||||||| |||||||||||||| | |||||| ||||||    
T  34015883 ttaattgatttgtcggtcccttaagttatttcttttattcaatttggtcccataa 34015829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 50879782 - 50879816
Alignment:
Q  153 ttttattcaatttggtccaattttgataattttaa 187  Q
    ||||||||||||| |||||||||||||||||||||    
T  50879782 ttttattcaattttgtccaattttgataattttaa 50879816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 10978093 - 10978134
Alignment:
Q  146 ttatttcttttattcaatttggtccaattttgataattttaa 187  Q
    ||||||||||||||||| || |||||||||| ||||||||||    
T  10978093 ttatttcttttattcaacttagtccaattttaataattttaa 10978134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 34014531 - 34014560
Alignment:
Q  141 ttaacttatttcttttattcaatttggtcc 170  Q
    ||||||||||||||||||||||||||||||    
T  34014531 ttaacttatttcttttattcaatttggtcc 34014560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 46902492 - 46902545
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||||| ||||||||||||||||  || ||| |||||||||| |||||||    
T  46902492 aggtctatcagattttatagtgtatcactaacaccaaatttatttactttcttc 46902545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 47429783 - 47429836
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||| | |||||||||||||||| ||| | |||||||||||| |||||||    
T  47429783 aggtctattagattttatagtgtatcaccaacatctaatttatttactttcttc 47429836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 50879517 - 50879546
Alignment:
Q  141 ttaacttatttcttttattcaatttggtcc 170  Q
    ||||||||||||||||||||||||||||||    
T  50879517 ttaacttatttcttttattcaatttggtcc 50879546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 50879848 - 50879901
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||||| |||||||||||||||| ||| ||||||||| |||  |||||||    
T  50879848 aggtctatcagattttatagtgtatcaccaacacctaatttgtttcctttcttc 50879901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 21728064 - 21728116
Alignment:
Q  211 attatgaaggtctatcatattttatagtgtatcatcaatacctaatttattta 263  Q
    |||| |||||||||||  |||||||| ||||||| ||| ||||||||||||||    
T  21728064 attacgaaggtctatctcattttataatgtatcaccaacacctaatttattta 21728116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 169
Target Start/End: Complemental strand, 24376523 - 24376495
Alignment:
Q  141 ttaacttatttcttttattcaatttggtc 169  Q
    |||||||||||||||||||||||||||||    
T  24376523 ttaacttatttcttttattcaatttggtc 24376495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 31938280 - 31938224
Alignment:
Q  202 gaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattt 258  Q
    |||| ||| |||| |||||||||| | |||||||||||||||| ||| |||||||||    
T  31938280 gaccgttggattacgaaggtctataagattttatagtgtatcaccaacacctaattt 31938224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 44116801 - 44116761
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttattta 101  Q
    ||||||||||  |||||||||||||||| ||||||||||||    
T  44116801 ttaattgatcctccggtcccttaacttaattcttttattta 44116761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 55210876 - 55210812
Alignment:
Q  207 ttgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||| | || ||||||| |||||||| ||||||| ||| || ||||||||||| |||||||    
T  55210876 ttgaattacggagatctatcagattttataatgtatcaccaacacataatttatttactttcttc 55210812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 7e-52; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 9391522 - 9391733
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| | ||||||||| ||||||||||||| ||   || |||||||||||||||||    
T  9391522 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataaatcttaattttctcaaacacgtcccttcacttatttcttttattc 9391621  T
Q  161 aatttggtccaattttgataattttaaaccttt-nnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||| |||||||||||||||||| |||||         |||| ||| |||| |||||||||||| |||||||||||||||||||| ||| ||||||    
T  9391622 aatttggtacaattttgataattttaatcctttaaaaaaagagaccgttggattacgaaggtctatcagattttatagtgtatcatcaacaccaaattta 9391721  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  9391722 tttactttcttc 9391733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 19217630 - 19217841
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| |||||| |||| | ||||||||||| ||  |||||||||||||||||||||    
T  19217630 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccattaacttatttcttttattc 19217729  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||| |||||||||||||||||| ||| |         |||| ||| |||| | |||||||||  |||||||||||||||| ||| ||||||||||    
T  19217730 aatttggtacaattttgataattttaataccctaaaaaaagagaccgttggattacggaggtctatcggattttatagtgtatcaccaacacctaattta 19217829  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  19217830 tttactttcttc 19217841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 18788675 - 18788464
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| |||||||||||||| |||||||||||||| | | |||| | ||||||||| | ||||||||||||||   ||||||||||||||||||||    
T  18788675 ttaattgatatgccggtcccttaatttatttcttttattcaatatggtcctataaatcttaactttctcaaacatgtcccttaacttatttcttttattc 18788576  T
Q  161 aatttggtccaattttgataattttaaacct-ttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||||||||||||||||||||||||||| ||| |         |||| ||| |||| |||||||||||| |||||||| ||||||| ||| ||||||||||    
T  18788575 aatttggtccaattttgataattttaatcctctaaaaaaatagaccgttggattacgaaggtctatcagattttataatgtatcaccaacacctaattta 18788476  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  18788475 tttactttcttc 18788464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 262
Target Start/End: Original strand, 44746727 - 44746931
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttat 158  Q
    |||||||||||||| ||||| |||||||||||| ||||||| | |||| |   |||| |||| |||||||||||||||||  ||||||||||||||||||    
T  44746727 gtttaattgatctgtcggtctcttaacttattttttttattcaatttgatcttataagtcttaattttctcaaacatgttcgttaacttatttcttttat 44746826  T
Q  159 tcaatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatt 257  Q
    ||||||||||| |||||||||||||||||  ||||         |||| ||| |||| | ||||||||||||||||||||||||| ||||| ||||||||    
T  44746827 tcaatttggtcaaattttgataattttaatcccttagaaaaagagaccgttggattacggaggtctatcatattttatagtgtattatcaacacctaatt 44746926  T
Q  258 tattt 262  Q
    |||||    
T  44746927 tattt 44746931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 29186667 - 29186878
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||||| |||||| | || | ||||||||||| ||   ||||||||||| ||||||||    
T  29186667 ttaattgatctgctggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttattttattc 29186766  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||| ||||||||||||||||||  ||||         |||| | | |||| | |||||||||| |||||||||||||||| ||| ||||||||||    
T  29186767 aatttggttcaattttgataattttaatcccttaaaaaatgagaccgtaggattacggaggtctatcagattttatagtgtatcaccaacacctaattta 29186866  T
Q  260 tttattttcttc 271  Q
    ||||||||||||    
T  29186867 tttattttcttc 29186878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 43962684 - 43962473
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||  ||||| ||||   ||||||||||||||   ||||||||||||||||||||    
T  43962684 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcacataagtcttagctttctcaaacatgtcccttaacttatttcttttattc 43962585  T
Q  161 aatttggtccaattttgataattttaaacct-ttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||| |||||||||||||||||||| | | |         |||| ||| |||| |||||||||||| |||||||||| |||||  || ||||||||||    
T  43962584 aatttgatccaattttgataattttaatcatctaaaaaaacagaccgttggattacgaaggtctatcagattttatagtatatcactaacacctaattta 43962485  T
Q  260 tttattttcttc 271  Q
    |||  |||||||    
T  43962484 tttcctttcttc 43962473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 13750751 - 13750625
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| |  ||||| |||| | ||||||||||| ||   ||||||||||||||||||||    
T  13750751 ttaattgatctgccggtcccttaacttatttcttttattcaatttgatcacataagtcttaactttctcaaacacgtcccttaacttatttcttttattc 13750652  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  13750651 aatttggtccaattttgataattttaa 13750625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 18787151 - 18787277
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| ||||||||||| ||||||||||| |||| |||||| ||||||||||| | ||| ||||| ||||   ||||||||||||||||||||    
T  18787151 ttaattgatctgtcggtcccttaatttatttcttttgtttaatttggtcccataaatcttaactttttcaaatatgtcccttaacttatttcttttattc 18787250  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  18787251 aatttggtccaattttgataattttaa 18787277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 44417460 - 44417586
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||| |  |||||||||| ||   ||||||||||| |||| |||    
T  44417460 ttaattgatctgccggtcccttaacttatttcttttattcaatttggttccataagtcttaacattctcaaacacgtcccttaacttatttattttcttc 44417559  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  44417560 aatttggtccaattttgataattttaa 44417586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 27072769 - 27072643
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| ||||||||||| |||||||||||||| | |||| | |||||| |||| | ||||||||||||||   ||||||||||||||||||||    
T  27072769 ttaattgatctgtcggtcccttaatttatttcttttattcaatttgatcccataagtcttaactttctcaaacatgtcccttaacttatttcttttattc 27072670  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||||||| |||||||||||||||||    
T  27072669 aatttggtcaaattttgataattttaa 27072643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 27205544 - 27205670
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| ||||||||||| |||||||||||||| | |||| | |||||| |||| | ||||||||||||||   ||||||||||||||||||||    
T  27205544 ttaattgatctgtcggtcccttaatttatttcttttattcaatttgatcccataagtcttaactttctcaaacatgtcccttaacttatttcttttattc 27205643  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||||||| |||||||||||||||||    
T  27205644 aatttggtcaaattttgataattttaa 27205670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 43113677 - 43113803
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||||  ||||| | || | ||||||||||| ||   ||||||||||||||||||||    
T  43113677 ttaattgatctgtcggtcccttaacttatttcttttattcaatttggtctcataagttttaactttctcaaacacgtcccttaacttatttcttttattc 43113776  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  43113777 aatttggtccaattttgataattttaa 43113803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 48792446 - 48792572
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| |||||| | || | ||| ||||||||||   ||||||||||||||||||||    
T  48792446 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttttcaaacatgtcccttaacttatttcttttattc 48792545  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||| || |||||||||||||||||    
T  48792546 aatttgatctaattttgataattttaa 48792572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 48793631 - 48793505
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||| |||||| |||| | ||| ||||||| ||   ||||||||||||||||||||    
T  48793631 ttaattgatttgccggtcccttaacttatttcttttattcattttggtcccataagtcttaactttttcaaacacgtcccttaacttatttcttttattc 48793532  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||| ||||||||||||||||||||    
T  48793531 aatttgatccaattttgataattttaa 48793505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 187
Target Start/End: Original strand, 3537422 - 3537555
Alignment:
Q  54 aaaatgtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttct 153  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| | || | ||||||||||| ||   |||||||||||||    
T  3537422 aaaaagtttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttct 3537521  T
Q  154 tttattcaatttggtccaattttgataattttaa 187  Q
    |||||||||||| ||| |||||| ||||||||||    
T  3537522 tttattcaatttagtctaattttaataattttaa 3537555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 9392930 - 9392804
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||| ||| ||| ||||||||||||||||||||| |||  | | |||| |||| | ||||||||||||||   ||||||||||||||||||||    
T  9392930 ttaattgatcttccgttcctttaacttatttcttttatttaatttattcctataagtcttaactttctcaaacatgtcccttaacttatttcttttattc 9392831  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  9392830 aatttggtccaattttgataattttaa 9392804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 263
Target Start/End: Original strand, 7011636 - 7011840
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| | |||||||||||||||||||||||| | |||| |  ||||| |||| | ||| ||||||||||   ||| ||||||||||||||||    
T  7011636 ttaattgatctgtcagtcccttaacttatttcttttattcaatttgatctcataagtcttaactttatcaaacatgtcccttagcttatttcttttattc 7011735  T
Q  161 aatttggtccaattttgataattttaaaccttt--nnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattt 258  Q
    ||||||||||||||||||||||||||| || ||          |||| ||| |||| | |||||||| | |||||||||||||||| ||| |||||||||    
T  7011736 aatttggtccaattttgataattttaatccattaaaaaaaaaagaccgttggattacggaggtctataagattttatagtgtatcaccaacacctaattt 7011835  T
Q  259 attta 263  Q
    |||||    
T  7011836 attta 7011840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 263
Target Start/End: Original strand, 7026994 - 7027198
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| | |||||||||||||||||||||||| | |||| |  ||||| |||| | ||| ||||||||||   ||| ||||||||||||||||    
T  7026994 ttaattgatctgtcagtcccttaacttatttcttttattcaatttgatctcataagtcttaactttatcaaacatgtcccttagcttatttcttttattc 7027093  T
Q  161 aatttggtccaattttgataattttaaaccttt--nnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattt 258  Q
    ||||||||||||||||||||||||||| || ||          |||| ||| |||| | |||||||| | |||||||||||||||| ||| |||||||||    
T  7027094 aatttggtccaattttgataattttaatccattaaaaaaaaaagaccgttggattacggaggtctataagattttatagtgtatcaccaacacctaattt 7027193  T
Q  259 attta 263  Q
    |||||    
T  7027194 attta 7027198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 263
Target Start/End: Complemental strand, 32519862 - 32519661
Alignment:
Q  63 aattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaa 162  Q
    |||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||| | |||||||||||  |   |||| |||||||||||||||||    
T  32519862 aattgatctgccggtcccttaatttatttcttttattcaatttggtcccataaatcttaactttctcaaacacatcccttaaattatttcttttattcaa 32519763  T
Q  163 tttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttatt 261  Q
    |||||| ||||||| ||||||||||  ||||         |||| |||||||| ||||||||| || ||| |||||||| ||| ||| ||||||||| ||    
T  32519762 tttggttcaattttaataattttaatcccttaaaaaaagagaccgttgaattacgaaggtctaccagattgtatagtgtgtcaccaacacctaatttttt 32519663  T
Q  262 ta 263  Q
    ||    
T  32519662 ta 32519661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 37235816 - 37235941
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||   | ||||||||||  ||   ||||||||||||||| ||||    
T  37235816 ttaattggcctgccggtcccttaacttatttcttttatttaatttggttccataaatcccaactttctcaaacgcgtcccttaacttatttctttgattc 37235915  T
Q  161 aatttggtccaattttgataatttta 186  Q
    |||||||||||||||||| |||||||    
T  37235916 aatttggtccaattttgagaatttta 37235941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 29188145 - 29188019
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||| |||||||||||||| ||||||||||||||||||| | |||||| |||||| |||| | ||||||||||| ||   |||| |||||| ||||||||    
T  29188145 ttaaatgatctgccggtcctttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaatttatttattttattc 29188046  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||| |||||||||||||||||||||    
T  29188045 aatttagtccaattttgataattttaa 29188019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 44420637 - 44420511
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| ||||| ||| ||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||   ||||||||||||||||||||    
T  44420637 ttaattgatatgccgatcctttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattc 44420538  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||| |||||||||||||||||||||    
T  44420537 aatttagtccaattttgataattttaa 44420511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 271
Target Start/End: Complemental strand, 45400127 - 45399914
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttat 158  Q
    ||||||||||||||||||||||||||||||||| |||  |||  ||||||  ||||| |||| | |||  |||||| ||   ||||||||||||||||||    
T  45400127 gtttaattgatctgccggtcccttaacttatttgtttattttgatttggtctcataactcttaacttttgcaaacacgtcccttaacttatttcttttat 45400028  T
Q  159 tcaatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatt 257  Q
    | | |||||||||||||||||||||||||  || |         |||| ||| |||| |||||||||||| ||||||||||||||||  || ||||||||    
T  45400027 ttactttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacgaaggtctatcagattttatagtgtatcactaacacctaatt 45399928  T
Q  258 tatttattttcttc 271  Q
    |||||| |||||||    
T  45399927 tatttactttcttc 45399914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 184
Target Start/End: Original strand, 44230421 - 44230553
Alignment:
Q  52 ataaaatgtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttattt 151  Q
    |||||| | ||||||||||||||| |||||||  |||||||||||||| | ||| ||||||||| | || | |||||||| || ||   |||||||||||    
T  44230421 ataaaaggcttaattgatctgccgatcccttagattatttcttttattcaatttagttccataagttttaactttctcaatcacgtcctttaacttattt 44230520  T
Q  152 cttttattcaatttggtccaattttgataattt 184  Q
    ||||||||||||||||||||||||| |||||||    
T  44230521 cttttattcaatttggtccaattttaataattt 44230553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 32518426 - 32518539
Alignment:
Q  63 aattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaa 162  Q
    |||||||||  ||||||||||| |||||||||||||| | |||||| ||||||||||| | ||||||||||| ||   |||| |||||||||||||||||    
T  32518426 aattgatctatcggtcccttaatttatttcttttattcaatttggtcccataaatcttaactttctcaaacacgtcccttaaattatttcttttattcaa 32518525  T
Q  163 tttggtccaatttt 176  Q
    |||||| |||||||    
T  32518526 tttggttcaatttt 32518539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 3538678 - 3538574
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||| |||||||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| || | || |||||||||||||||||    
T  3538678 ttaattgatccgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcttttcacttatttcttttattc 3538579  T
Q  161 aattt 165  Q
    |||||    
T  3538578 aattt 3538574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 184
Target Start/End: Complemental strand, 37237340 - 37237219
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||  ||||| |||| | | |||||||||  |   ||||||||||  |||||||     
T  37237340 ttaattgatctgcccgtcccttaatttatttcttttatttaatttggtctcataagtcttaactctctcaaacacatcccttaacttatt--ttttatta 37237243  T
Q  161 aatttggtccaattttgataattt 184  Q
    ||||||||||||||||||||||||    
T  37237242 aatttggtccaattttgataattt 37237219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 271
Target Start/End: Original strand, 13597136 - 13597357
Alignment:
Q  50 aaataaaatgtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttat 149  Q
    |||||||| | |||||||| |||||| ||| ||||| ||||||||||||| | |||||| | |||| |||| | ||||||||||| ||   | |||||||    
T  13597136 aaataaaaggcttaattgaactgccgatcctttaacgtatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtccctgaacttat 13597235  T
Q  150 ttcttttattcaatttggtccaattttgataattttaaacct-ttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaa 248  Q
    |||||||||| |||||| | |||||||||||||||||| ||| |          | | ||| |||| | |||||||| | |||||||||||||||| |||    
T  13597236 ttcttttattaaatttgat-caattttgataattttaatcctctaaaaaaagatatcgttggattagggaggtctataagattttatagtgtatcaccaa 13597334  T
Q  249 tacctaatttatttattttcttc 271  Q
     |||||||||||||| |||||||    
T  13597335 cacctaatttatttactttcttc 13597357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 12630507 - 12630614
Alignment:
Q  62 taattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattca 161  Q
    |||||||| || |||||| ||||||||| ||||||||| | ||||||  ||||| |||| | |||||||||||||||  ||||||||| |||||| ||||    
T  12630507 taattgatatgtcggtcctttaacttatgtcttttattcaatttggtctcataagtcttaactttctcaaacatgttccttaacttatgtcttttcttca 12630606  T
Q  162 atttggtc 169  Q
    ||||||||    
T  12630607 atttggtc 12630614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 43961016 - 43961147
Alignment:
Q  141 ttaacttatttcttttattcaatttggtccaattttgataattttaaacct-ttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtg 239  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| ||| |         |||| ||| ||||  ||||||||||| |||||||||||    
T  43961016 ttaatttatttcttttattcaatttgatccaattttgataattttaatcctctacaaaaacagaccgttggattacaaaggtctatcagattttatagtg 43961115  T
Q  240 tatcatcaatacctaatttatttattttcttc 271  Q
    |||||  || |||||||||||||| |||||||    
T  43961116 tatcactaacacctaatttatttactttcttc 43961147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 44748598 - 44748467
Alignment:
Q  141 ttaacttatttcttttattcaatttggtccaattttgataattttaaacctttnnnnnnnn-gaccattgaattatgaaggtctatcatattttatagtg 239  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| ||  |         |||  ||| |||| |||||||||||| |||||||||||    
T  44748598 ttaatttatttcttttattcaatatggtccaattttgataattttaatcccctagaaaaggagactgttggattacgaaggtctatcagattttatagtg 44748499  T
Q  240 tatcatcaatacctaatttatttattttcttc 271  Q
    ||||| ||| |||||||||||||| |||||||    
T  44748498 tatcaccaacacctaatttatttactttcttc 44748467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 42611438 - 42611511
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaaca 134  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| | || | |||||||||||    
T  42611438 ttaattgatctgccggtcctttaacttatttcttttattcaatttggttccataagttttaactttctcaaaca 42611511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 43115122 - 43114991
Alignment:
Q  141 ttaacttatttcttttattcaatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaatta-tgaaggtctatcatattttatagt 238  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||||         |||| ||| |||| |||| |||||||| ||||||||||    
T  43115122 ttaacttatttcttttattcaatttgatccaattttgataattttaatcccttaaaaaagaagaccgttggattactgaa-gtctatcagattttatagt 43115024  T
Q  239 gtatcatcaatacctaatttatttattttcttc 271  Q
    | |||||||  |||||||||||||| |||||||    
T  43115023 gcatcatcataacctaatttatttactttcttc 43114991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 44231957 - 44231898
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatctt 120  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||| |||||||||||    
T  44231957 ttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcccataaatctt 44231898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 7057444 - 7057390
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataa 115  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| ||||||    
T  7057444 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataa 7057390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 13599293 - 13599247
Alignment:
Q  141 ttaacttatttcttttattcaatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  13599293 ttaacttatttcttttattcaatttgctccaattttgataattttaa 13599247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 26005414 - 26005463
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttc 110  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  26005414 ttaattgatctgccggtcccttaacttatttcttttattcaatttggttc 26005463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 26005434 - 26005479
Alignment:
Q  141 ttaacttatttcttttattcaatttggtccaattttgataatttta 186  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  26005434 ttaacttatttcttttattcaatttggttcaattttgataatttta 26005479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 45688870 - 45688943
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaaca 134  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||||  ||||| |||| | |||||||||||    
T  45688870 ttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaaca 45688943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 187
Target Start/End: Original strand, 12630584 - 12630693
Alignment:
Q  79 ccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaac-ttatttcttttattcaatttggtccaattttg 177  Q
    ||||||||||| |||||| || | ||||||  || || |||| ||||||||||||| ||   ||||| || ||| ||||||||||||||||| |||||||    
T  12630584 ccttaacttatgtcttttcttcaatttggtctcaaaagtcttaattttctcaaacacgtcccttaacctttttttttttattcaatttggtctaattttg 12630683  T
Q  178 ataattttaa 187  Q
    ||||||||||    
T  12630684 ataattttaa 12630693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 19008934 - 19008988
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataa 115  Q
    |||||||||||| ||||||||||||||||||||||| || | |||||| ||||||    
T  19008934 ttaattgatctgtcggtcccttaacttatttctttttttcaatttggtcccataa 19008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 26006858 - 26006804
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataa 115  Q
    |||||||||||| ||||||||||||||||||||||| || | |||||| ||||||    
T  26006858 ttaattgatctgtcggtcccttaacttatttcttttgttcaatttggtcccataa 26006804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 27071023 - 27071077
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataa 115  Q
    ||||||||||||||||||  ||||||||||||||||||| | |||||| ||||||    
T  27071023 ttaattgatctgccggtcatttaacttatttcttttattcaatttggtcccataa 27071077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 27207290 - 27207236
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataa 115  Q
    ||||||||||||||||||  ||||||||||||||||||| | |||||| ||||||    
T  27207290 ttaattgatctgccggtcatttaacttatttcttttattcaatttggtcccataa 27207236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 43960948 - 43960986
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatt 99  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  43960948 ttaattgatctgtcggtcccttaacttatttcttttatt 43960986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 13599214 - 13599161
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||||| ||||||||||||||||  || |||||||||||||| |||||||    
T  13599214 aggtctatcagattttatagtgtatcagtaacacctaatttatttactttcttc 13599161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 29187987 - 29187934
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||||| ||||||||||| |||| ||| |||||||||||||| |||||||    
T  29187987 aggtctatcagattttatagtgcatcaccaacacctaatttatttactttcttc 29187934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 37237185 - 37237132
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||||| |||||||||||||| | ||| |||||||||||||| |||||||    
T  37237185 aggtctatcagattttatagtgtatgaccaacacctaatttatttactttcttc 37237132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 44417618 - 44417671
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||||| |||||||||| ||||| ||| |||||||||||||| |||||||    
T  44417618 aggtctatcagattttatagtctatcaccaacacctaatttatttactttcttc 44417671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 32518557 - 32518616
Alignment:
Q  202 gaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttatt 261  Q
    |||| ||| |||| | |||||||||| |||||||||||||||| ||| ||||||||||||    
T  32518557 gaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatt 32518616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 19016812 - 19016758
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataa 115  Q
    |||||||||||| ||||||||||| ||||||||||| || | |||||| ||||||    
T  19016812 ttaattgatctgtcggtcccttaatttatttctttttttcaatttggtcccataa 19016758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 44231819 - 44231765
Alignment:
Q  217 aaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||| || |||||||||||||||| ||| |||| ||||||||| |||||||    
T  44231819 aaggtctaccagattttatagtgtatcaccaacacctgatttatttactttcttc 44231765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 7057424 - 7057395
Alignment:
Q  141 ttaacttatttcttttattcaatttggtcc 170  Q
    ||||||||||||||||||||||||||||||    
T  7057424 ttaacttatttcttttattcaatttggtcc 7057395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 9392772 - 9392719
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||||| |||||||||||||||| |   |||||||||||||| |||||||    
T  9392772 aggtctatcagattttatagtgtatcaccggcacctaatttatttactttcttc 9392719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 13749066 - 13749111
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttg 106  Q
    |||||||||||| ||||||| ||||||||||||| |||||| ||||    
T  13749066 ttaattgatctggcggtcccataacttatttcttatatttaatttg 13749111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 24653786 - 24653733
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccata 114  Q
    ||||||||||  |||||||||||||||| ||||||||||||  ||||| |||||    
T  24653786 ttaattgatcctccggtcccttaacttaattcttttatttaaattggtcccata 24653733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 27071043 - 27071072
Alignment:
Q  141 ttaacttatttcttttattcaatttggtcc 170  Q
    ||||||||||||||||||||||||||||||    
T  27071043 ttaacttatttcttttattcaatttggtcc 27071072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 27207270 - 27207241
Alignment:
Q  141 ttaacttatttcttttattcaatttggtcc 170  Q
    ||||||||||||||||||||||||||||||    
T  27207270 ttaacttatttcttttattcaatttggtcc 27207241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 43113835 - 43113888
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||||| |||||||||||||||| ||  |||||||||||||  |||||||    
T  43113835 aggtctatcagattttatagtgtatcaccagcacctaatttatttgctttcttc 43113888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 44231937 - 44231908
Alignment:
Q  141 ttaacttatttcttttattcaatttggtcc 170  Q
    ||||||||||||||||||||||||||||||    
T  44231937 ttaacttatttcttttattcaatttggtcc 44231908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 169
Target Start/End: Complemental strand, 3538658 - 3538630
Alignment:
Q  141 ttaacttatttcttttattcaatttggtc 169  Q
    |||||||||||||||||||||||||||||    
T  3538658 ttaacttatttcttttattcaatttggtc 3538630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 42611570 - 42611622
Alignment:
Q  211 attatgaaggtctatcatattttatagtgtatcatcaatacctaatttattta 263  Q
    |||| |||| ||||||| || |||||||||||||||||||| | |||||||||    
T  42611570 attaggaagatctatcagatcttatagtgtatcatcaatacttgatttattta 42611622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 169
Target Start/End: Original strand, 43960968 - 43960996
Alignment:
Q  141 ttaacttatttcttttattcaatttggtc 169  Q
    |||||||||||||||||||||||||||||    
T  43960968 ttaacttatttcttttattcaatttggtc 43960996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 44420486 - 44420427
Alignment:
Q  211 attatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||| |||||||||||| |||| ||||||||||| ||| | |||||||||||| |||||||    
T  44420486 attacgaaggtctatcagattt-atagtgtatcaccaacatctaatttatttactttcttc 44420427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 45398543 - 45398579
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttt 95  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  45398543 gtttaattgatctgtcggtcccttaacttacttcttt 45398579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 169
Target Start/End: Original strand, 45688890 - 45688918
Alignment:
Q  141 ttaacttatttcttttattcaatttggtc 169  Q
    |||||||||||||||||||||||||||||    
T  45688890 ttaacttatttcttttattcaatttggtc 45688918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 61 - 193
Target Start/End: Complemental strand, 6803739 - 6803607
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||||||  ||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  6803739 ttaattgatctgtcggtcccttaatttatttcttttatttaatttggtcacataagtcttaattttctcaaacatgtttcttaacttatttcttttattc 6803640  T
Q  161 aatttggtccaattttgataattttaaaccttt 193  Q
    ||||||||||||||||||||||||||| |||||    
T  6803639 aatttggtccaattttgataattttaatccttt 6803607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 12372317 - 12372528
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||| ||||||| | ||||||  ||||| |||| | ||||||||||| || | ||||||||||| ||||||||    
T  12372317 ttaattgatctgccggtcccttaacttatttgttttattcaatttggtctcataagtcttaactttctcaaacacgtctcttaacttatttgttttattc 12372416  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||| |||||||||||||||||||| ||| |          ||| ||| |||| |||||||||||| |||||||||||||||| ||| ||||||||||    
T  12372417 aatttgatccaattttgataattttaataccctaaaaaaacataccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattta 12372516  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  12372517 tttactttcttc 12372528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 19228841 - 19229052
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||| | |||| |||| | ||||||||||| |||  |||||| |||||||||||||    
T  19228841 ttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgttccttaactgatttcttttattc 19228940  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  || |         |||| ||| |||| | |||||||| | |||||||||||||||||||| ||||||||||    
T  19228941 aatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctattagattttatagtgtatcatcaacacctaattta 19229040  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  19229041 tttactttcttc 19229052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 13276822 - 13276948
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| | ||||||||| ||||||||||||| ||   ||||||||||||||||||||    
T  13276822 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataaatcttaattttctcaaacacgtcccttaacttatttcttttattc 13276921  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||||||| |||||||||||||||||    
T  13276922 aatttggtcaaattttgataattttaa 13276948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 19230188 - 19229977
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||| |||||||| |||||||||||||| | |||||| | |||| |||| | ||||||||||| ||   |||||| |||||||||||||    
T  19230188 ttaattgatctgccgatcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattc 19230089  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| |||||||||||||||||||| || |||||||    
T  19230088 aatttggtccaattttgataattttaatcccctcaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcatcaacacttaattta 19229989  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  19229988 tttactttcttc 19229977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 9081982 - 9082108
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||| ||||| |||||||| |||||||||||| | |||| |||||||| |||| | ||||||||||| ||   ||||||||||||||||||||    
T  9081982 ttaattgatctaccggttccttaactcatttcttttattcaatttgattccataagtcttaactttctcaaacacgtcccttaacttatttcttttattc 9082081  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  9082082 aatttggtccaattttgataattttaa 9082108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 12373836 - 12373710
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||| |||||||| ||||||||||||||||||| | ||| || |||||| |||| | ||||||||||| ||   ||||||||||| ||||||||    
T  12373836 ttaattgatccgccggtcctttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaacttatttattttattc 12373737  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  12373736 aatttggtccaattttgataattttaa 12373710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 18655767 - 18655641
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||   |||| |||||||||||||||    
T  18655767 ttaattgatctgccggttccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtcccttaatttatttcttttattc 18655668  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||| ||||||||||||||    
T  18655667 aatttggtccaactttgataattttaa 18655641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 39349483 - 39349609
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| |||||| ||||||||||||||||||| | ||||||||||||| |||| | ||||||||||| ||   ||||||||||||||||| ||    
T  39349483 ttaattgatctgacggtcctttaacttatttcttttattcaatttggttccataactcttaactttctcaaacacgtcctttaacttatttcttttactc 39349582  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||| ||||||| ||||||||||    
T  39349583 aatttggttcaatttttataattttaa 39349609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 260
Target Start/End: Original strand, 18654299 - 18654500
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttatt- 159  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||| |||||| |||| | ||||||||||| ||   |||||||||||||||||||     
T  18654299 ttaattgatctgccggtcccttaatttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttatttcttttatta 18654398  T
Q  160 caatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattt 258  Q
     ||||||||||||||||||| |||||||  || ||        |||| ||| |||| | |||||||||| |||||| ||||||||| ||| |||||||||    
T  18654399 aaatttggtccaattttgatcattttaatcccattaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaattt 18654498  T
Q  259 at 260  Q
    ||    
T  18654499 at 18654500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 39350760 - 39350634
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| ||||||||||||||||||||||||||||| | ||| || |||||| |||| | ||||||||||| ||   ||||||||||||||||| |     
T  39350760 ttaattgatatgccggtcccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgtcccttaacttatttcttttactt 39350661  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||| ||||||||||    
T  39350660 aatttggtccaatttttataattttaa 39350634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 9083411 - 9083285
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||||||  ||||| | |||||||||||| | |||||| |||||| |||| | ||||||||||| ||   ||||||| ||| ||||||||    
T  9083411 ttaattgatctgccggtttcttaattcatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttttttattttattc 9083312  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  9083311 aatttggtccaattttgataattttaa 9083285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 59 - 263
Target Start/End: Complemental strand, 13278348 - 13278143
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttat 158  Q
    |||||||||||||| ||||||||||| |||||| ||||||| | ||||||  ||||| |||| | ||||||||||| ||   ||||||||||| |||  |    
T  13278348 gtttaattgatctgtcggtcccttaatttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttttttact 13278249  T
Q  159 tcaatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatt 257  Q
    |||||||| ||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| |||||||||||||||| ||| ||||||||    
T  13278248 tcaatttgatccaattttgataattttaatcccatagaaaaagagaccgttggattagggaggtctatcagattttatagtgtatcaccaacacctaatt 13278149  T
Q  258 tattta 263  Q
    ||||||    
T  13278148 tattta 13278143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 166
Target Start/End: Original strand, 8447080 - 8447185
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||| ||||||||||||||||||||||||||| | |||||| |||||| | || | ||||||||||| ||   ||||||||||||||||||||    
T  8447080 ttaattgatctaccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttcttttattc 8447179  T
Q  161 aatttg 166  Q
    ||||||    
T  8447180 aatttg 8447185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 6801975 - 6802075
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttat 158  Q
    ||||||||||||||| |||||||||||||||||||||| |||| ||||||  ||||| |||| ||||||||||||| ||   ||||||||||||||||||    
T  6801975 gtttaattgatctgctggtcccttaacttatttcttttttttaatttggtctcataagtcttaattttctcaaacacgtcccttaacttatttcttttat 6802074  T
Q  159 t 159  Q
    |    
T  6802075 t 6802075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 263
Target Start/End: Original strand, 39164139 - 39164260
Alignment:
Q  141 ttaacttatttcttttattcaatttggtccaattttgataattttaaacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgt 240  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| || ||        |||  |||||||| | ||| |||||| ||||||||||||    
T  39164139 ttaacttatttcttttattcaatttggtccaattttgat-attttaatcccttaaaaaaaagactgttgaattacggaggcctatcaaattttatagtgt 39164237  T
Q  241 atcatcaatacctaatttattta 263  Q
    |||| ||| ||||||||||||||    
T  39164238 atcaccaacacctaatttattta 39164260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 4031904 - 4031950
Alignment:
Q  141 ttaacttatttcttttattcaatttggtccaattttgataattttaa 187  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  4031904 ttaacttatttcttttattcaatttagtccaattttgataattttaa 4031950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 4031884 - 4031922
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatt 99  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  4031884 ttaattgatctgccggtcacttaacttatttcttttatt 4031922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 4033060 - 4032929
Alignment:
Q  141 ttaacttatttcttttattcaatttggtccaattttgataattttaaacc-tttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtg 239  Q
    ||||||||||| ||||||| || ||||||||||||| |||||||||| ||  |         |||| ||| |||| | |||||||||| |||||||| ||    
T  4033060 ttaacttattttttttatttaacttggtccaattttaataattttaatccactaaaaaaagagaccgttggattacggaggtctatcagattttataatg 4032961  T
Q  240 tatcatcaatacctaatttatttattttcttc 271  Q
    |||||| || ||||| |||||||| |||||||    
T  4032960 tatcattaacacctagtttatttactttcttc 4032929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 6803580 - 6803529
Alignment:
Q  220 gtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||| |||||||||||||||| ||| | |||||||||||| |||||||    
T  6803580 gtctatcagattttatagtgtatcaccaacatctaatttatttactttcttc 6803529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 8447100 - 8447129
Alignment:
Q  141 ttaacttatttcttttattcaatttggtcc 170  Q
    ||||||||||||||||||||||||||||||    
T  8447100 ttaacttatttcttttattcaatttggtcc 8447129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 12373690 - 12373621
Alignment:
Q  202 gaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||| ||| |||| ||| |||||||| |||||| | ||||||| ||| |||||||||||||| |||||||    
T  12373690 gaccgttggattacgaatgtctatcagattttacactgtatcaccaacacctaatttatttactttcttc 12373621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 25001645 - 25001717
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaac 133  Q
    ||||||||| || |||||| ||||||||||||||||||| | |||| || ||||| |||| | |||| |||||    
T  25001645 ttaattgatatgtcggtcctttaacttatttcttttattcaatttgatttcataagtcttaactttcgcaaac 25001717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 35952551 - 35952479
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaac 133  Q
    |||| ||||||| | |||| ||||||||||||||||||| | ||||||  |||||||||| | ||| ||||||    
T  35952551 ttaactgatctgtcagtcctttaacttatttcttttattcaatttggtctcataaatcttaactttgtcaaac 35952479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 169
Target Start/End: Complemental strand, 35952531 - 35952503
Alignment:
Q  141 ttaacttatttcttttattcaatttggtc 169  Q
    |||||||||||||||||||||||||||||    
T  35952531 ttaacttatttcttttattcaatttggtc 35952503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 7261658 - 7261447
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||| ||||||||||||||||||||||||||| | |||| | |||||| |||| | ||||||||||| ||   ||||||||||||||||||||    
T  7261658 ttaattgatctaccggtcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcccttaacttatttcttttattc 7261559  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  || |         |||||||| |||| |||||||||| | |||||||||||||||| ||| ||||||||||    
T  7261558 aatttggtccaattttgataattttaatcccctaaaaaaatagaccattggattacgaaggtctataagattttatagtgtatcaccaacacctaattta 7261459  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  7261458 tttactttcttc 7261447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 38031171 - 38031382
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||| | |||| |||| | ||||||||||| ||   |||||| |||||||||||||    
T  38031171 ttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattc 38031270  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  || |         |||| |||||||| | |||||||||| |||||||||||||||||||| ||||||||||    
T  38031271 aatttggtccaattttgataattttaatcccataaaaaaaaagaccgttgaattacggaggtctatcagattttatagtgtatcatcaacacctaattta 38031370  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  38031371 tttactttcttc 38031382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 18091583 - 18091794
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||| |||| | ||||||||| | ||  |||||||||| | ||||||||    
T  18091583 ttaattgatctgccgatcccttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaaaacgtccattaacttatctattttattc 18091682  T
Q  161 aatttggtccaattttgataattttaaac-ctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||||| ||||||||||||||||||||| | |||         |||| ||||||||   |||||||||| |||||||||||||||| ||| ||||||||||    
T  18091683 aatttagtccaattttgataattttaatctcttaaaaaatgagaccgttgaattacagaggtctatcagattttatagtgtatcaccaacacctaattta 18091782  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  18091783 tttactttcttc 18091794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 17357980 - 17357852
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttat 158  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||| | ||||||||||| ||   ||||||||||||||||||    
T  17357980 gtttaattgatctgccggtcccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacacgtcccttaacttatttcttttat 17357881  T
Q  159 tcaatttggtccaattttgataattttaa 187  Q
    ||||| || ||||||||||||||||||||    
T  17357880 tcaatatgatccaattttgataattttaa 17357852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 10802892 - 10803103
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||| |||||||| || | ||||||||||| ||   ||||||||||||||||||||    
T  10802892 ttaattgatctgccgatcccttaacttatttcttttattcaatttggtcccataaattttaactttctcaaacacgtcccttaacttatttcttttattc 10802991  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||||||||||||||||||||||||||| ||| |         |||| ||| |||| | |||| ||||| |||||||| ||||||| ||| ||| ||||||    
T  10802992 aatttggtccaattttgataattttaataccctaaaaaaagagaccgttggattacggaggtttatcagattttatattgtatcaccaacaccgaattta 10803091  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  10803092 tttactttcttc 10803103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 38032535 - 38032324
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||||   |||| |||| | ||||||||||| ||   |||||| |||||||||||||    
T  38032535 ttaattgatctgccggtcccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaactgatttcttttattc 38032436  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| |||||||||||||||||||| ||||||||||    
T  38032435 aatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaattta 38032336  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  38032335 tttactttcttc 38032324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 35191820 - 35191946
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||  |||||||||||||||||||||||||||| | ||||||| ||||| |||| | ||||||||||| ||| |||||||||||||||||||||    
T  35191820 ttaattgattcgccggtcccttaacttatttcttttattcaatttggtttcataagtcttaactttctcaaacacgttcattaacttatttcttttattc 35191919  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||| || ||||||||||||||||||    
T  35191920 aatttagttcaattttgataattttaa 35191946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 266
Target Start/End: Original strand, 8814138 - 8814343
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||  |||||||||||||||||||||||||| | ||| || |||||||||||   ||||||||||||||   ||||||||||||||||||||    
T  8814138 ttaattgatctatcggtcccttaacttatttcttttattcaatttagtcccataaatcttatctttctcaaacatgtcccttaacttatttcttttattc 8814237  T
Q  161 aatttggtccaattttgataattttaaacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttat 260  Q
    ||||||||| |||||||||||||||||  |  |        |||  ||| |||| | |||||||||| ||||||||||||| || ||| |||||||||||    
T  8814238 aatttggtcgaattttgataattttaataccctaaaaaatagactgttggattacggaggtctatcagattttatagtgtaacaccaacacctaatttat 8814337  T
Q  261 ttattt 266  Q
    ||||||    
T  8814338 ttattt 8814343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 10804310 - 10804099
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| | |||| | || | ||||| ||| | |||  ||||||||||||||||||||    
T  10804310 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataagttttaactttcttaaataagttccttaacttatttcttttattc 10804211  T
Q  161 aatttggtccaattttgataattttaaacc-tttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||| |||||||||||||||||| ||  |         |||| ||| |||| | |||||||||| |||||| |||||||||||||  |||||||||    
T  10804210 aatttggttcaattttgataattttaatccactaaaaaaaaagaccgttggattacggaggtctatcagattttacagtgtatcatcaacgcctaattta 10804111  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  10804110 tttactttcttc 10804099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 17356364 - 17356575
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| |||||||||||||||||||||||||| | |||| | ||| ||||||| | ||||||||||| ||   ||||||||||||||||||||    
T  17356364 ttaattgatctgtcggtcccttaacttatttcttttattcaatttgatgccagaaatcttaactttctcaaacacgtcccttaacttatttcttttattc 17356463  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||| ||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| |||||||||||||||| ||| ||||| || |    
T  17356464 aatttgttccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctagttca 17356563  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  17356564 tttactttcttc 17356575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 22621870 - 22622081
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||| |||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||   || |||||||||||||||||    
T  22621870 ttaattgatctgccagtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctttacttatttcttttattc 22621969  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| |||||||||||||||| | | ||| ||||||    
T  22621970 aatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccgacaccgaattta 22622069  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  22622070 tttactttcttc 22622081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 8815472 - 8815261
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| ||||||||| ||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||   |||||||||||||| |||||    
T  8815472 ttaattgatttgccggtccgttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttctattc 8815373  T
Q  161 aatttggtccaattttgataattttaaacct-ttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    || |||||||||||||||||||||||| ||| |          ||| ||| |||| | |||||||||| |||||||||||||||| ||| ||| ||||||    
T  8815372 aaattggtccaattttgataattttaatcctctaaaaaaaaaaaccgttggattacggaggtctatcagattttatagtgtatcaccaacaccaaattta 8815273  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  8815272 tttactttcttc 8815261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 48499367 - 48499493
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||||   ||||||||||||||||||||| | |||||| |||||| |||| | ||| ||||||||||   ||||||||||| ||||||||    
T  48499367 ttaattgatctgccgccaccttaacttatttcttttattcaatttggtcccataattcttaactttttcaaacatgtcccttaacttatttattttattc 48499466  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  48499467 aatttggtccaattttgataattttaa 48499493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 56233727 - 56233853
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||| |||||  |||||||||||||||||||||||||| | ||||||  ||||| |||  | ||||||||||||||   ||||||||||||||||||||    
T  56233727 ttaatagatctatcggtcccttaacttatttcttttattcaatttggtcgcataagtctcaactttctcaaacatgtcccttaacttatttcttttattc 56233826  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  56233827 aatttggtccaattttgataattttaa 56233853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 76 - 271
Target Start/End: Complemental strand, 34095759 - 34095563
Alignment:
Q  76 gtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaatttggtccaattt 175  Q
    |||||||||||||||| ||||||| | ||||||  ||||| |||| | ||||||||||| ||   |||||||||||||||| ||||||||||||||||||    
T  34095759 gtcccttaacttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttgttcaatttggtccaattt 34095660  T
Q  176 tgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    ||||||||||||  || |         |||| |||||||| | |||||||||| |||||||||||||||| | | |||||||||||||| |||||||    
T  34095659 tgataattttaatcccctaaaaaaggagaccgttgaattacggaggtctatcagattttatagtgtatcacccacacctaatttatttactttcttc 34095563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 35193311 - 35193185
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||| ||||| ||||||||| |||||||||||||| | ||||||  |||||| ||| | ||||||||||| ||   ||||||||||||||||||||    
T  35193311 ttaattgacctgccagtcccttaatttatttcttttattcaatttggtctcataaaacttaactttctcaaacacgtcctttaacttatttcttttattc 35193212  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||||||||| |||||||||||||||    
T  35193211 aatttggtccatttttgataattttaa 35193185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 56235135 - 56234925
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| | ||||||||| |||||||||||||| | |||| |  ||||| |||| | ||| |||||||      ||||||||||||||||||||    
T  56235135 ttaattgatctgtcagtcccttaatttatttcttttattcaatttgatctcataagtcttaactttatcaaacacaccccttaacttatttcttttattc 56235036  T
Q  161 aatttggtccaattttgataattttaaacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttat 260  Q
    |||| |||| |||||||||| |||||| ||| |        ||||| ||||||| |||||||||||| |||||||| ||||||| ||| |||||||||||    
T  56235035 aattcggtctaattttgatacttttaatcctctaaaaaacagaccaatgaattacgaaggtctatcagattttataatgtatcaccaacacctaatttat 56234936  T
Q  261 ttattttcttc 271  Q
    ||| |||||||    
T  56234935 ttactttcttc 56234925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 48501437 - 48501228
Alignment:
Q  62 taattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattca 161  Q
    ||||||||||| |||| | ||||||||||||||||||| | || |||| ||||| |||| | ||||||||||||||   |||||||||||||||||||||    
T  48501437 taattgatctgtcggttctttaacttatttcttttattcaattaggtttcataattcttaactttctcaaacatgtcctttaacttatttcttttattca 48501338  T
Q  162 atttggtccaattttgataattttaaacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttatt 261  Q
    |||||||| |||||| ||| ||| |  || |         |||| ||  |||| | |||||| ||| ||||||| |||||||||||| ||||||||||||    
T  48501337 atttggtctaattttaatattttaatcccctaaaaaaagagaccgttagattacggaggtctgtcagattttattgtgtatcatcaacacctaatttatt 48501238  T
Q  262 tattttcttc 271  Q
    || |||||||    
T  48501237 tactttcttc 48501228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 48080273 - 48080376
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||||| ||||| |||| | |||||||||| |||   ||||||||||||||||||||    
T  48080273 ttaattgatctgtcggtcacttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaacttgtcctttaacttatttcttttattc 48080372  T
Q  161 aatt 164  Q
    ||||    
T  48080373 aatt 48080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 48081706 - 48081597
Alignment:
Q  60 tttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttatt 159  Q
    |||||||||| || ||||||||||||||||| |||||||| | ||||||||||||| |||| | ||| ||||| ||||   |||||||||||||||||||    
T  48081706 tttaattgatgtgtcggtcccttaacttattccttttattcaatttggttccataagtcttaactttttcaaatatgtcccttaacttatttcttttatt 48081607  T
Q  160 caatttggtc 169  Q
    ||||||||||    
T  48081606 caatttggtc 48081597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 23758086 - 23757874
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||| | |||| |||||||||||||| | ||| ||  ||||| | || | ||||||||||| ||   |||||||||||||||||||     
T  23758086 ttaattgatctgccggttctttaatttatttcttttattcaatttagtctcataagttttaactttctcaaacacgtcccttaacttatttcttttatta 23757987  T
Q  161 aa-tttggtccaattttgataattttaaacct-ttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattt 258  Q
    || |||| |||||||||||||||||||| |||           |||| |||||||| | |||||||||| ||||||| |||||||| ||| |||||||||    
T  23757986 aattttgatccaattttgataattttaatcctccaaaaaaagagaccgttgaattacggaggtctatcagattttatggtgtatcaccaacacctaattt 23757887  T
Q  259 atttattttcttc 271  Q
    ||||| |||||||    
T  23757886 atttactttcttc 23757874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 271
Target Start/End: Complemental strand, 5433502 - 5433311
Alignment:
Q  81 ttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaatttggtccaattttgata 180  Q
    ||||||||||||||||||| | |||||| | |||| | || | ||||||||||||||   ||||||||||| |||||||||||||  |||||||||||||    
T  5433502 ttaacttatttcttttattcaatttggtcctataagttttaactttctcaaacatgtgccttaacttatttattttattcaatttactccaattttgata 5433403  T
Q  181 attttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    ||||||| ||| |         |||  ||| |||| | |||||||||| |||||||| |||||||  || |||||||||||||| |||||||    
T  5433402 attttaataccctaaaaattgagactgttgtattacggaggtctatcagattttataatgtatcacaaacacctaatttatttaatttcttc 5433311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 22623230 - 22623132
Alignment:
Q  89 tttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaatttggtccaattttgataattttaa 187  Q
    ||||||||||| | |||||| |||||| |||| | |||||||| || ||   || ||||||||||||||||||||||||||||||||||||||||||||    
T  22623230 tttcttttattcaatttggtcccataagtcttaactttctcaagcacgtccctttacttatttcttttattcaatttggtccaattttgataattttaa 22623132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 34122917 - 34122844
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaaca 134  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||| ||||||||||| | |||||||||||    
T  34122917 ttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaaca 34122844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 34121302 - 34121375
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaaca 134  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||||  ||||| |||| | |||||||||||    
T  34121302 ttaattgatctgccggtcccttaatttatttcttttattcaatttggtctcataagtcttaactttctcaaaca 34121375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 36074758 - 36074701
Alignment:
Q  211 attatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttc 268  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  36074758 attacgaaggtctatcatattttatagtgtatcaccaacacctaatttatttaatttc 36074701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 48463099 - 48463026
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaaca 134  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||  ||||| | || | |||||||||||    
T  48463099 ttaattgatctgctggtcccttaacttatttcttttattcaatttggtctcataagttttaactttctcaaaca 48463026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 22624425 - 22624389
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttctttta 97  Q
    |||||||||||||||||||||||||||||||||||||    
T  22624425 ttaattgatctgccggtcccttaacttatttctttta 22624389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 35927080 - 35927020
Alignment:
Q  211 attatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||| ||||||||| || |||||||||||||||| ||| |||||||||||||| |||||||    
T  35927080 attacgaaggtctaccagattttatagtgtatcaccaacacctaatttatttactttcttc 35927020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 35925855 - 35925905
Alignment:
Q  221 tctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||||||    
T  35925855 tctatcagattttatagtgtatcgtcaacacctaatttatttactttcttc 35925905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 36074909 - 36074793
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcatt-ttctcaaacatgtttattaacttatttcttttatt 159  Q
    |||||| || |||||  |||||| ||||||| ||||||| | ||| || |||||||| || | | ||||||| || |||  ||||||||||| |||||||    
T  36074909 ttaattaatttgccgaccccttatcttatttattttattcaatttagtcccataaattttaactcttctcaagcacgttccttaacttattttttttatt 36074810  T
Q  160 caatttggtccaatttt 176  Q
    |||||||||| ||||||    
T  36074809 caatttggtctaatttt 36074793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 48081442 - 48081395
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggt 108  Q
    ||||||||| |||||||||||||||||||| |||||||| | ||||||    
T  48081442 ttaattgatttgccggtcccttaacttattccttttattcaatttggt 48081395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 48081630 - 48081572
Alignment:
Q  76 gtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaaca 134  Q
    |||||||||||||||||||||||| | ||||||  ||||| |||| | |||||||||||    
T  48081630 gtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaaca 48081572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 5574203 - 5574256
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccata 114  Q
    ||||||||||  |||||||||||||||| ||||||||||||  ||||| |||||    
T  5574203 ttaattgatcctccggtcccttaacttaattcttttatttaaattggtaccata 5574256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 34122897 - 34122868
Alignment:
Q  141 ttaacttatttcttttattcaatttggtcc 170  Q
    ||||||||||||||||||||||||||||||    
T  34122897 ttaacttatttcttttattcaatttggtcc 34122868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 169
Target Start/End: Complemental strand, 48463079 - 48463051
Alignment:
Q  141 ttaacttatttcttttattcaatttggtc 169  Q
    |||||||||||||||||||||||||||||    
T  48463079 ttaacttatttcttttattcaatttggtc 48463051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 61 - 262
Target Start/End: Complemental strand, 5488982 - 5488780
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||| |||| ||||||||||||||||||||||| | ||| || |||||| |||| | ||||||||||| ||| |||||||||||||||||||||    
T  5488982 ttaattgatccgccgatcccttaacttatttcttttattcaatttagtcccataagtcttaactttctcaaacacgttcattaacttatttcttttattc 5488883  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  ||||         |||| ||| |||| | |||||||||| |||||||||||||||| ||| ||||||||||    
T  5488882 aatttggtccaattttgataattttaatcccttagaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcaccaacacctaattta 5488783  T
Q  260 ttt 262  Q
    |||    
T  5488782 ttt 5488780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 51693150 - 51693361
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||| |||||| |||| | ||||||||||| ||   ||||||||||||||||||||    
T  51693150 ttaattgatctgtcggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcctttaacttatttcttttattc 51693249  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||| |||||||||||||||||| ||| |         |||| ||| |||| | |||||||||  |||||||||||||||| ||| ||||||||||    
T  51693250 aatttggttcaattttgataattttaataccctaaaaaaagagaccgttggattacggaggtctatcggattttatagtgtatcaccaacacctaattta 51693349  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  51693350 tttactttcttc 51693361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 52759366 - 52759577
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||| |||| | ||||||||| | ||  |||||||||| | ||||||||    
T  52759366 ttaattgatctgccgatcccttaacttatttcttttatttaatttggtttcataagtcttaactttctcaaaaacgtccattaacttatctattttattc 52759465  T
Q  161 aatttggtccaattttgataattttaaac-ctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||||| ||||||||||||||||||||| | |||         |||| ||||||||   |||||||||| |||||||||||||||| ||| ||||||||||    
T  52759466 aatttagtccaattttgataattttaatctcttaaaaaatgagaccgttgaattacagaggtctatcagattttatagtgtatcaccaacacctaattta 52759565  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  52759566 tttactttcttc 52759577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 7110229 - 7110440
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||| | |||| |||| | ||||||||||| ||   |||||| |||||||||||||    
T  7110229 ttaattgatctgccggtcccttaatttatttcttttatttaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattc 7110328  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  || |         || | ||| |||  | |||||||||| ||||||||||||||||||||  |||||||||    
T  7110329 aatttggtccaattttgataattttaatcccctaaaaaaagagatcgttggattgcggaggtctatcagattttatagtgtatcatcaacgcctaattta 7110428  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  7110429 tttactttcttc 7110440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 45229719 - 45229592
Alignment:
Q  60 tttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttatt 159  Q
    ||||||||||||| ||||||||||| |||||||||||||| | ||||||  |||||||||| ||||||||||||| ||   |||||||||||||||||||    
T  45229719 tttaattgatctgtcggtcccttaatttatttcttttattcaatttggtctcataaatcttaattttctcaaacacgtcccttaacttatttcttttatt 45229620  T
Q  160 caatttggtccaattttgataattttaa 187  Q
    ||||||| ||||||||||||||||||||    
T  45229619 caatttgatccaattttgataattttaa 45229592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 68 - 271
Target Start/End: Complemental strand, 7111583 - 7111379
Alignment:
Q  68 atctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaatttgg 167  Q
    |||| ||||| |||||| |||||||||||||| | |||||| | |||| |||| | ||||||||||| ||  ||||||| ||||||||||||||||||||    
T  7111583 atctcccggttccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtccattaactgatttcttttattcaatttgg 7111484  T
Q  168 tccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattt 266  Q
    ||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| |||||||||||||||||||| |||||||||||||| ||    
T  7111483 tccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttactt 7111384  T
Q  267 tcttc 271  Q
    |||||    
T  7111383 tcttc 7111379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 50485108 - 50484985
Alignment:
Q  64 attgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaat 163  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||  ||||| |||| | ||||||||||| ||   |||||||||||||||||||||||    
T  50485108 attgatctgccggtcccttaacttatttcatttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattcaat 50485009  T
Q  164 ttggtccaattttgataattttaa 187  Q
    ||||||||||||||||||||||||    
T  50485008 ttggtccaattttgataattttaa 50484985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 51468342 - 51468468
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||| ||||||| | ||||||  ||||| |||| | ||||||||||| ||   ||||||||||||||||||||    
T  51468342 ttaattgatctgccggtcccttaacttattttttttattcaatttggtctcataagtcttaactttctcaaacacgtcccttaacttatttcttttattc 51468441  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||| ||||||||||    
T  51468442 aatttggtccaattttaataattttaa 51468468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 52086630 - 52086839
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| |||||| | || | ||||||||||| ||   ||||||||||||||||||||    
T  52086630 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcccataagttttaactttctcaaacacgtcccttaacttatttcttttattc 52086729  T
Q  161 aatttggtccaattttgataattttaaacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttat 260  Q
    ||||| |||||||||| |||||||||| ||  |         ||| ||| |||| |||||||||| | |||||||||||||||| ||  ||||||||| |    
T  52086730 aatttagtccaattttaataattttaatcccctaaaaaaaa-accgttggattacgaaggtctataaaattttatagtgtatcaccatcacctaattttt 52086828  T
Q  261 ttattttcttc 271  Q
    ||| |||||||    
T  52086829 ttactttcttc 52086839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 17244178 - 17244389
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||| | |||||||| ||||||||||||||||||||| | |||||| |||||| |||  | ||||||||||| ||   ||||||||||||||| ||||    
T  17244178 ttaattaacctgccggttccttaacttatttcttttattcaatttggtcccataagtctcaactttctcaaacacgtcccttaacttatttctttgattc 17244277  T
Q  161 aatttggtccaattttgataattttaaac-ctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||||||||||||||||||||||||||| | | |         |||| ||| |||| | |||||||||| |||||||| ||||||| | ||||||||||||    
T  17244278 aatttggtccaattttgataattttaatctcctaaaaaaagagaccgttggattacggaggtctatcagattttataatgtatcaccgatacctaattta 17244377  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  17244378 tttactttcttc 17244389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 5488504 - 5488630
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||  |||||||||| |||||||||||||| | |||| ||||||||  ||| | ||||||||||| ||   ||||||||||||||||||||    
T  5488504 ttaattgatctgttggtcccttaatttatttcttttattcaatttgattccataagacttaactttctcaaacacgtcctttaacttatttcttttattc 5488603  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||| ||||||||||||||||||||    
T  5488604 aatttgatccaattttgataattttaa 5488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 45228283 - 45228404
Alignment:
Q  66 tgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaattt 165  Q
    |||||||||||| | ||||||||||||||||||||| ||| || |||||||| || |  || ||||||| |||  |||||||||||||||||||||||||    
T  45228283 tgatctgccggttctttaacttatttcttttatttaattttgtcccataaattttaaccttatcaaacacgttctttaacttatttcttttattcaattt 45228382  T
Q  166 ggtccaattttgataattttaa 187  Q
    ||||||||||| ||||||||||    
T  45228383 ggtccaattttaataattttaa 45228404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 40187606 - 40187731
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| |||||| || |||||||||||||||| | |||||| |||||| |||| | ||| ||||||||||   ||||||||||||||||| ||    
T  40187606 ttaattgatctgacggtcctttcacttatttcttttattcaatttggtcccataagtcttaactttatcaaacatgtcc-ttaacttatttcttttactc 40187704  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||| ||||||||||    
T  40187705 aatttggtccaatttttataattttaa 40187731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 51469016 - 51468890
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| | |||||||||||||||| ||||||| | |||||| ||||||||||| | ||| ||||||| ||   | |||||||||||| |||||    
T  51469016 ttaattgatctgtcagtcccttaacttattttttttattcaatttggtcccataaatcttaactttttcaaacacgtccctaaacttatttcttctattc 51468917  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||| ||||||||||    
T  51468916 aatttggtccaattttaataattttaa 51468890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 47532961 - 47533086
Alignment:
Q  62 taattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattca 161  Q
    ||||||||||||||||||||||| |||||| ||||||| | ||||||  |||||||||| | ||| ||||||| |||  |||| ||||||| ||||||||    
T  47532961 taattgatctgccggtcccttaagttattttttttattcaatttggtctcataaatcttaactttatcaaacacgttccttaaattatttcatttattca 47533060  T
Q  162 atttggtccaattttgataattttaa 187  Q
    ||||| | ||||||||||||||||||    
T  47533061 atttgattcaattttgataattttaa 47533086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 1823407 - 1823285
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| ||  ||||| |||| |   ||||||||||||   ||||||||||| ||||||||    
T  1823407 ttaattgatctgccggtcccttaacttatttcttttattcaatttagtcacataagtcttaa---tctcaaacatgtcgcttaacttattt-ttttattc 1823312  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||| ||||||||||||||||||||    
T  1823311 aatttgatccaattttgataattttaa 1823285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 18819265 - 18819391
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||| |||||| |||||| ||||||| | |||| | |||||| |||| | |||||||| || ||   |||| |||||||||||||||    
T  18819265 ttaattgatctgccggttccttaaattattttttttattcaatttgatcccataagtcttaactttctcaatcacgtcccttaatttatttcttttattc 18819364  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||||| |||||||| ||||||||||    
T  18819365 aatttggcccaattttaataattttaa 18819391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 17245779 - 17245654
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||| |||||| |||||| |||||||||||||| | ||||||  ||||| |||| | | ||||||||| ||   ||||||||||| |||||||     
T  17245779 ttaattgatccgccggttccttaatttatttcttttattcaatttggtctcataagtcttaactctctcaaacaagtcccttaacttattt-ttttatta 17245681  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||||||||||||||||| |||||||    
T  17245680 aatttggtccaattttgatcattttaa 17245654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 38235252 - 38235138
Alignment:
Q  73 ccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaatttggtccaa 172  Q
    |||||||||||| |||||||||||||| | ||||||   |||| |||| | ||||||||||| ||   ||||||||||||||||||| ||||||||||||    
T  38235252 ccggtcccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaacttatttcttttattaaatttggtccaa 38235153  T
Q  173 ttttgataattttaa 187  Q
    |||| |||| |||||    
T  38235152 ttttaataagtttaa 38235138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 50483514 - 50483638
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| |||||  |||||||||||||| |||| | ||||||  ||||| |||| ||||||| ||| | ||   |||| |||||||||||||||    
T  50483514 ttaattgatctgtcggtct-ttaacttatttcttgtattcaatttggtctcataagtcttaattttcttaaaaacgtcatttaatttatttcttttattc 50483612  T
Q  161 aatttggtccaattttgataatttta 186  Q
    |||||||||||||||| |||||||||    
T  50483613 aatttggtccaatttttataatttta 50483638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 269
Target Start/End: Complemental strand, 52761631 - 52761502
Alignment:
Q  141 ttaacttatttcttttattcaatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  || |         |||| ||| |||  | |||||||||| |||||||||||    
T  52761631 ttaacttatttcttttattcaatttggtccaattttgataattttaatcccctgaaaaaagagaccgttggattgcggaggtctatcagattttatagtg 52761532  T
Q  240 tatcatcaatacctaatttatttattttct 269  Q
    ||||| ||| |||||||||||||| |||||    
T  52761531 tatcaccaacacctaatttatttactttct 52761502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 25181504 - 25181596
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttct 153  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| | |||| |||| | ||||||||||| ||   |||||||||||||    
T  25181504 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaacttatttct 25181596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 186
Target Start/End: Complemental strand, 52087875 - 52087764
Alignment:
Q  75 ggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattcaatttggtccaatt 174  Q
    |||| |||||||||||||||||||| | ||||||  ||||  |||| | ||||||||||| ||   || ||||||||||||||||||||||| | |||||    
T  52087875 ggtctcttaacttatttcttttattcaatttggtctcatatgtcttaactttctcaaacacgtcctttcacttatttcttttattcaatttgattcaatt 52087776  T
Q  175 ttgataatttta 186  Q
    ||||||||||||    
T  52087775 ttgataatttta 52087764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 262
Target Start/End: Original strand, 1821908 - 1822114
Alignment:
Q  57 atgtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttctttt 156  Q
    |||||||||| ||||| |||| |||||| |||||| ||||||| | ||| || | |||||| || | ||||||||||| ||   ||||||||||| ||||    
T  1821908 atgtttaatt-atctgtcggttccttaatttattttttttattcaattttgtcctataaattttaactttctcaaacacgtcccttaacttatttttttt 1822006  T
Q  157 -attcaatttggtccaattttgataattttaaaccttt-nnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaataccta 254  Q
     ||| ||||| ||| ||||||||||||||||| |||||         |||| |||  ||| |||||||||||  ||||||||||||||||| || |||||    
T  1822007 tatttaatttagtctaattttgataattttaatcctttaaaaaaagagaccgttgggttacgaaggtctatctgattttatagtgtatcattaacaccta 1822106  T
Q  255 atttattt 262  Q
    ||||||||    
T  1822107 atttattt 1822114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 47533969 - 47533758
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||| |||| ||||| |||||||||||||||| ||| || |||||| | || | ||| ||||| | || | |||| ||||||| || ||||    
T  47533969 ttaattgatctgctggtctcttaaattatttcttttatttaatttagtcccataagttttaactttttcaaatacgtctcttaaattatttcattcattc 47533870  T
Q  161 aatttggtccaattttgataattttaaacct-ttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||| | |||||||||||||| ||| |||           |||| || |||||   || ||||||| |||||||||||||||| ||| ||||||||||    
T  47533869 aatttgattcaattttgataattataatcctccaaaaaaatagaccgttaaattagagagatctatcagattttatagtgtatcaccaacacctaattta 47533770  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  47533769 tttactttcttc 47533758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 21203171 - 21203224
Alignment:
Q  217 aaggtctatcatattttatagtgtatcatcaatacctaatttatttattttctt 270  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||| ||||||    
T  21203171 aaggtctatcagattttatagtgtatcatcaacacctaatttatttactttctt 21203224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 18820871 - 18820812
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatctt 120  Q
    ||||||||||| ||||||||||||||||||||||||||| | ||||||  ||||||||||    
T  18820871 ttaattgatctaccggtcccttaacttatttcttttattcaatttggtctcataaatctt 18820812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 52761651 - 52761604
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggt 108  Q
    ||||||||| ||||||| ||||||||||||||||||||| | ||||||    
T  52761651 ttaattgatatgccggttccttaacttatttcttttattcaatttggt 52761604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 1823260 - 1823215
Alignment:
Q  211 attatgaaggtctatcatattttatagtgtatcatcaatacctaat 256  Q
    |||| |||||||||||| |||||||||||||||| ||| |||||||    
T  1823260 attacgaaggtctatcagattttatagtgtatcaccaacacctaat 1823215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 25181524 - 25181553
Alignment:
Q  141 ttaacttatttcttttattcaatttggtcc 170  Q
    ||||||||||||||||||||||||||||||    
T  25181524 ttaacttatttcttttattcaatttggtcc 25181553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 51468500 - 51468545
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttattta 263  Q
    |||||||||| |||||||||||||||| ||| ||| ||||||||||    
T  51468500 aggtctatcagattttatagtgtatcaccaacacccaatttattta 51468545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 169
Target Start/End: Complemental strand, 18820851 - 18820823
Alignment:
Q  141 ttaacttatttcttttattcaatttggtc 169  Q
    |||||||||||||||||||||||||||||    
T  18820851 ttaacttatttcttttattcaatttggtc 18820823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 38235114 - 38235054
Alignment:
Q  211 attatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||| ||| |||||| | |||||| ||||||||| ||| |||||||||||||| |||||||    
T  38235114 attacgaatgtctataagattttacagtgtatcaccaacacctaatttatttactttcttc 38235054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 45229560 - 45229508
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttctt 270  Q
    |||||||||| |||||||| || |||| ||| |||||||||||||| ||||||    
T  45229560 aggtctatcagattttataatggatcaccaacacctaatttatttagtttctt 45229508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 52087747 - 52087679
Alignment:
Q  202 gaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttctt 270  Q
    |||| |||||||| | |||||||||| ||||||  |||||||| ||| | |||||||||||| ||||||    
T  52087747 gaccgttgaattacggaggtctatcaaattttacggtgtatcaccaacatctaatttatttaatttctt 52087679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 32713998 - 32713787
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||| |||||  |||||||||||||||||| |||||||||||||||||||| | ||||||||||| ||   ||||||||||||||||||||    
T  32713998 ttaattgatctgctggtcctgtaacttatttcttttattcagtttggttccataaatcttaactttctcaaacacgtcccttaacttatttcttttattc 32713899  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  || |         |||| ||| |||| | |||||||| | |||||| ||||||||| ||| ||||||||||    
T  32713898 aatttggtccaattttgataattttaatcccctaaaaaaagtgaccgttggattacggaggtctataagattttacagtgtatcaccaacacctaattta 32713799  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  32713798 tttactttcttc 32713787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 59 - 271
Target Start/End: Original strand, 32712356 - 32712569
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttat 158  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||   ||||||||| | || | ||||||||||||||||||    
T  32712356 gtttaattgatctgtcggtcccttaacttatttcttttattcagtttggtcctataaatcttacatttctcaaatacgtctcttaacttatttcttttat 32712455  T
Q  159 tcaatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatt 257  Q
    |||||||||||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| ||||||||||||| || ||| |||||| |    
T  32712456 tcaatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtaccaccaacacctaact 32712555  T
Q  258 tatttattttcttc 271  Q
    |||||| |||||||    
T  32712556 tatttactttcttc 32712569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 32349152 - 32348941
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||||   |||| |||| | ||||||||||| ||   |||||| |||||||||||||    
T  32349152 ttaattgatctgccggtcccttaatttatttcttttattcaatttggtcttataagtcttaactttctcaaacacgtcccttaactgatttcttttattc 32349053  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| |||||||||||||||||||| ||||||||||    
T  32349052 aatttggtccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaattta 32348953  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  32348952 tttactttcttc 32348941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 270
Target Start/End: Complemental strand, 11801457 - 11801247
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||| | |||| |||| | ||||||||||| ||   |||||| |||||||||||||    
T  11801457 ttaattgatctgccggtcccttaatttatttcttttattcaatttggtcctataagtcttaactttctcaaacacgtcccttaactgatttcttttattc 11801358  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  || |         |||| ||| |||| | |||||||||| ||||||||||||||||| || ||||||||||    
T  11801357 aatttggtccaattttgataattttaatcccctcaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcattaacacctaattta 11801258  T
Q  260 tttattttctt 270  Q
    |||| ||||||    
T  11801257 tttactttctt 11801247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 3000908 - 3000697
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| || |||||||||||||||||||||||||| | |||||| ||||||||||| | |||||||||||  |   ||||||||||||||||||||    
T  3000908 ttaattgatttgtcggtcccttaacttatttcttttattcaatttggtcccataaatcttaactttctcaaacacctcccttaacttatttcttttattc 3000809  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||||| |||||||||||||||||||||  || |         || | ||| |||| |||||||||||| ||||||||||||||||  || ||||||||||    
T  3000808 aatttagtccaattttgataattttaatcccctaaaaacacagatcgttggattacgaaggtctatcagattttatagtgtatcactaacacctaattta 3000709  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  3000708 tttactttcttc 3000697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 271
Target Start/End: Complemental strand, 34996876 - 34996665
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| || |||||||| ||||||||||||||||| | ||| || |||||| |||| | ||||||||| | ||   ||||||||||||||||||||    
T  34996876 ttaattgatttgtcggtccctgaacttatttcttttattcaatttagtcccataagtcttaactttctcaaatacgtcccttaacttatttcttttattc 34996777  T
Q  161 aatttggtccaattttgataattttaaac-ctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||||||||||||||||||||||||||| | | |         |||| ||| |||| |||||||||||| |||||||||||||||| ||| ||||||||||    
T  34996776 aatttggtccaattttgataattttaatctcctaaaaaaacagaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattta 34996677  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  34996676 tttactttcttc 34996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 34995355 - 34995565
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| |||||| ||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| || | ||||||||||||||||||||    
T  34995355 ttaattgatctgtcggtcctttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtct-ttaacttatttcttttattc 34995453  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||| ||||||||||  || |         |||| ||  |||| |||||||||||| |||||||||||||||| ||| | ||||||||    
T  34995454 aatttggtccaattttaataattttaatcccctaaaaaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacatctaattta 34995553  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  34995554 tttactttcttc 34995565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 18572888 - 18573098
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||| ||||||||||||||||||| | |||||| |||||| |||| | ||||| ||| | ||   ||||||||||||||||||||    
T  18572888 ttaattgatctgccggtccgttaacttatttcttttattcaatttggtcccataagtcttaactttcttaaaaacgtcccttaacttatttcttttattc 18572987  T
Q  161 aatttggtccaattttgataattttaaacctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttat 260  Q
    || |||| ||||||||||||||||||| ||  |         ||  ||| |||| | |||||||||| |||||| ||||||||| ||| || ||||||||    
T  18572988 aaattgggccaattttgataattttaatcccctaaaaaagacactgttggattacggaggtctatcaaattttacagtgtatcaccaacacataatttat 18573087  T
Q  261 ttattttcttc 271  Q
    ||| |||||||    
T  18573088 ttactttcttc 18573098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 32347811 - 32348022
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||| ||| |||||| |||||||||||||| | ||||||   |||| |||| | ||||||||||| ||   |||| | |||||||||||||    
T  32347811 ttaattgatctgctggttccttaatttatttcttttattcaatttggtcatataagtcttaactttctcaaacacgtcccttaagtgatttcttttattc 32347910  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    |||||||||||||||||||||||||||  || |         || | ||| |||| |  ||||||||| |||||||||||||||||||| ||||||||||    
T  32347911 aatttggtccaattttgataattttaatcccctaaaaaaagagaacgttggattacgggggtctatcagattttatagtgtatcatcaacacctaattta 32348010  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  32348011 tttactttcttc 32348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 61 - 170
Target Start/End: Complemental strand, 18574408 - 18574299
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||||||||||| |||||||||||||||| | ||||||||||||| |||| | |||||||| || ||   | ||||||||||||||||||    
T  18574408 ttaattgatctgccggtcccttgacttatttcttttattcaatttggttccataagtcttaactttctcaagcacgtccctgaacttatttcttttattc 18574309  T
Q  161 aatttggtcc 170  Q
    ||||||||||    
T  18574308 aatttggtcc 18574299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 184
Target Start/End: Complemental strand, 29479309 - 29479186
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||| |||||||| |||||||||||||| | | |||| |||||| | || | |||||||| || ||   ||||||||||||||||||||    
T  29479309 ttaattgatctgccgatcccttaaattatttcttttattcaatctggtcccataagttttaactttctcaatcacgtcctttaacttatttcttttattc 29479210  T
Q  161 aatttggtccaattttgataattt 184  Q
    |||||||||||||||| |||||||    
T  29479209 aatttggtccaattttaataattt 29479186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 120
Target Start/End: Original strand, 29477762 - 29477821
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatctt 120  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||  ||||||||||    
T  29477762 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataaatctt 29477821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 19383263 - 19383141
Alignment:
Q  60 tttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaactta--tttctttta 157  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||       |||| |||| | ||||||||||| ||   ||||||||  ||| |||||    
T  19383263 tttaattgatccgccggtcccttaacttatttcttttattcaatt-------ataagtcttaactttctcaaacacgtcccttaacttatttttttttta 19383171  T
Q  158 ttcaatttggtccaattttgataattttaa 187  Q
    ||||||||| || |||||||||||||||||    
T  19383170 ttcaatttgatctaattttgataattttaa 19383141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 27719896 - 27719941
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttattta 263  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||||    
T  27719896 aggtctatcagattttatagtgtatcaccaacacctaatttattta 27719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 19383127 - 19383059
Alignment:
Q  202 gaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||| ||| |||| || ||||||||| |||||||||||||||| ||| | |||||||||||| |||||||    
T  19383127 gaccgttggattacgatggtctatcagattttatagtgtatca-caacatctaatttatttactttcttc 19383059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 21095336 - 21095291
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttattta 263  Q
    ||||||| || |||||||||||||||| ||| ||||||||||||||    
T  21095336 aggtctaccagattttatagtgtatcaccaacacctaatttattta 21095291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 169
Target Start/End: Original strand, 29477782 - 29477810
Alignment:
Q  141 ttaacttatttcttttattcaatttggtc 169  Q
    |||||||||||||||||||||||||||||    
T  29477782 ttaacttatttcttttattcaatttggtc 29477810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 1716 - 1590
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||| | ||||||||||| ||   |||| ||||||| |||||||    
T  1716 ttaattgatctgccggtcccttaacttatttcttttattcaatttggttccataagtcttaactttctcaaacacgtcctttaatttatttcctttattc 1617  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  1616 aatttggtccaattttgataattttaa 1590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 137 - 263
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||| |||||||||||||||||||||||| | |||| | |||||| |||| | ||||||||||| ||   |||| ||||||| |||||||    
T  137 ttaattgatctgccagtcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaacacgtcctttaatttatttcctttattc 236  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||||||| |||||||||||||||||    
T  237 aatttggtcaaattttgataattttaa 263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 79; Significance: 5e-37; HSPs: 3)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 3142 - 3016
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||||| |||||||||||||||||||||||| | |||||| |||||| |||| | ||||||| ||| ||   ||||||||||||||||||||    
T  3142 ttaattgatctgccagtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcagacacgtcccttaacttatttcttttattc 3043  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  3042 aatttggtccaattttgataattttaa 3016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 1852 - 1897
Alignment:
Q  141 ttaacttatttcttttattcaatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  1852 ttaacttatttcttttattcaatttggtccaatttt-ataattttaa 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 2990 - 2938
Alignment:
Q  211 attatgaaggtctatcatattttatagtgtatcatcaatacctaatttattta 263  Q
    |||| |||||||||||| |||||||||||||||| ||| ||||||||||||||    
T  2990 attacgaaggtctatcagattttatagtgtatcaccaacacctaatttattta 2938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 27892451 - 27892325
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||| ||| ||   ||||||||||||||||||||    
T  27892451 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcagacacgtcccttaacttatttcttttattc 27892352  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||| ||||||||||||||||||||    
T  27892351 aatttgatccaattttgataattttaa 27892325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 38244070 - 38243944
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| ||||||||||| |||||||||||||| | |||||| |||||| |||| | ||| ||||||| ||   ||||||||||||||||||||    
T  38244070 ttaattgatctgtcggtcccttaatttatttcttttattcattttggtcccataagtcttaactttttcaaacacgtcccttaacttatttcttttattc 38243971  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  38243970 aatttggtccaattttgataattttaa 38243944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 61 - 271
Target Start/End: Original strand, 16602728 - 16602939
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| ||||||||||| |||||||||||||| | |||||| |||||| |||| | ||||||||||| ||   |||||||||||||||||||     
T  16602728 ttaattgatctgtcggtcccttaatttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtcccttaacttatttcttttattt 16602827  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    || ||||||||||||||||||||||||  |||          |||| ||| |||| | | |||||||| |||||| ||||||||| ||| ||||||||||    
T  16602828 aaattggtccaattttgataattttaatccctaaaaaaaaaagaccgttggattacggatgtctatcagattttacagtgtatcaccaacacctaattta 16602927  T
Q  260 tttattttcttc 271  Q
    |||| |||||||    
T  16602928 tttactttcttc 16602939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 27891109 - 27891235
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||  ||||  |||| | ||||||||||| ||   ||||||||||||||||||||    
T  27891109 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataggtcttaactttctcaaacacgtcccttaacttatttcttttattc 27891208  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    | |||||| ||||||||||||||||||    
T  27891209 attttggttcaattttgataattttaa 27891235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 170
Target Start/End: Complemental strand, 16604304 - 16604195
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||| ||||||||||||||||||||||||||| | |||||| |||||| |||| | |||||||| || ||   | ||||||||||||||||||    
T  16604304 ttaattgatctaccggtcccttaacttatttcttttattcaatttggtcccataagtcttaagtttctcaagcacgtccctgaacttatttcttttattc 16604205  T
Q  161 aatttggtcc 170  Q
    ||||||||||    
T  16604204 aatttggtcc 16604195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 23832971 - 23833096
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| || |||||||||||||||||| |||||||   |||||| |||||| |||| | ||||||||||| ||   ||||||| ||| ||||||||    
T  23832971 ttaattgatttgtcggtcccttaacttatttattttattccatttggtcccataagtcttaactttctcaaacacgtcc-ttaacttttttattttattc 23833069  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    ||||| |||||||||||||||||||||    
T  23833070 aatttagtccaattttgataattttaa 23833096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 26388221 - 26388347
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| ||||| |||||||||||| ||||||| | |||| |  ||||| |||| | ||||||||||| ||   |||||||||||||||||||     
T  26388221 ttaattgatctgtcggtctcttaacttattttttttattcaatttgatctcataagtcttaactttctcaaacacgtcctttaacttatttcttttattt 26388320  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||| | ||||||||||||||||||    
T  26388321 aatttgattcaattttgataattttaa 26388347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 23833985 - 23833912
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaaca 134  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| | |||||| |||| | |||||||||||    
T  23833985 ttaattgatctgccggtcccttaacttatttcttttattcaatttgatcccataagtcttaactttctcaaaca 23833912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 166
Target Start/End: Original strand, 43814524 - 43814629
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| || |||||||||||||||||||||||||| | ||| ||  ||||| |||| | ||||||||| | ||   ||||||||||||||||||||    
T  43814524 ttaattgatttgtcggtcccttaacttatttcttttattcaatttcgtctcataagtcttaactttctcaaatacgtcctttaacttatttcttttattc 43814623  T
Q  161 aatttg 166  Q
    ||||||    
T  43814624 aatttg 43814629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 38242953 - 38243012
Alignment:
Q  128 tcaaacatgtttattaacttatttcttttattcaatttggtccaattttgataattttaa 187  Q
    |||||||||| | ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  38242953 tcaaacatgtctcttaacttatttcttttatttaatttgatccaattttgataattttaa 38243012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 5034931 - 5034858
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaaca 134  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||| | || | |||||||||||    
T  5034931 ttaattgatttgccggtcctttaacttatttcttttatttaatttggttctataacttttaactttctcaaaca 5034858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 27892300 - 27892248
Alignment:
Q  211 attatgaaggtctatcatattttatagtgtatcatcaatacctaatttattta 263  Q
    |||| |||||||||||| |||||||||||||||| ||| ||||||||||||||    
T  27892300 attacgaaggtctatcagattttatagtgtatcaccaacacctaatttattta 27892248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 19577441 - 19577382
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatctt 120  Q
    ||||||||||| ||||||||||||||||||||||||| | | |||||| |||||| ||||    
T  19577441 ttaattgatctcccggtcccttaacttatttcttttagtcaatttggtcccataactctt 19577382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 5033501 - 5033530
Alignment:
Q  141 ttaacttatttcttttattcaatttggtcc 170  Q
    ||||||||||||||||||||||||||||||    
T  5033501 ttaacttatttcttttattcaatttggtcc 5033530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 43814698 - 43814649
Alignment:
Q  59 gtttaattgatctgccggtcccttaacttatttcttttatttagtttggt 108  Q
    |||||||||||||| ||||||| |||| ||||||||||||| | ||||||    
T  43814698 gtttaattgatctgtcggtcccctaacatatttcttttattcaatttggt 43814649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 27891260 - 27891320
Alignment:
Q  211 attatgaaggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||| ||| |||||||| |||||  ||||||||| ||| |||||||||||||| |||||||    
T  27891260 attacgaatgtctatcagattttccagtgtatcaccaacacctaatttatttactttcttc 27891320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 35400 - 35274
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||| |||||| |||| | ||||||||||| ||   | ||||||||||||||| ||    
T  35400 ttaattgatctggcggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccctcaacttatttcttttactc 35301  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||| ||||||||||    
T  35300 aatttggtccaatttttataattttaa 35274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 267
Target Start/End: Original strand, 31036 - 31243
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||   | ||||||||||||||| ||    
T  31036 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctcaacttatttcttttactc 31135  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||||||||||| |||| ||||||||||  || |         |||| ||| |||| | |||||||||| |||||||||||||||| ||| |||||||||     
T  31136 aatttggtccagtttttataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttt 31235  T
Q  260 tttatttt 267  Q
    ||| ||||    
T  31236 tttgtttt 31243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 79412 - 79538
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||| |||||| |||| | ||||||||||| ||   | ||||||||||||||| ||    
T  79412 ttaattgatctggcggtcccttaacttatttcttttattcaatttggtcccataagtcttaactttctcaaacacgtccctcaacttatttcttttactc 79511  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||| ||||||||||    
T  79512 aatttggtccaatttttataattttaa 79538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 267
Target Start/End: Complemental strand, 83776 - 83569
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||   | ||||||||||||||| ||    
T  83776 ttaattgatctgccggtcccttaacttatttcttttattcaatttggtctcataagtcttaactttctcaaacacgtccctcaacttatttcttttactc 83677  T
Q  161 aatttggtccaattttgataattttaa-acctttnnnnnnnngaccattgaattatgaaggtctatcatattttatagtgtatcatcaatacctaattta 259  Q
    ||||||||||| |||| ||||||||||  || |         |||| ||| |||| | |||||||||| |||||||||||||||| ||| |||||||||     
T  83676 aatttggtccagtttttataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttt 83577  T
Q  260 tttatttt 267  Q
    ||| ||||    
T  83576 tttgtttt 83569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 25460 - 25334
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||| ||   |||| ||||||||||||||     
T  25460 ttaattgatctgccgctcccttaacttatttcttttattcaatttggtcacataagtcttaactttctcaaacacgtcccttaatttatttcttttatta 25361  T
Q  161 aatttggtccaattttgataattttaa 187  Q
    |||||||||||||||||||||||||||    
T  25360 aatttggtccaattttgataattttaa 25334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 25301 - 25256
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttattta 263  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||||||    
T  25301 aggtttatcacattttatagtgtattatcaacacctaatttattta 25256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 104304 - 104407
Alignment:
Q  61 ttaattgatctgccggtcccttaacttatttcttttatttagtttggttccataaatcttcattttctcaaacatgtttattaacttatttcttttattc 160  Q
    ||||||||| || |||||||||||||||||||||||||| | |||||| |||||| | || |  |||||||||| ||   ||||||||||||||||||||    
T  104304 ttaattgatttgacggtcccttaacttatttcttttattcaatttggtcccataagttttaacattctcaaacacgtcccttaacttatttcttttattc 104403  T
Q  161 aatt 164  Q
    ||||    
T  104404 aatt 104407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 104412 - 104465
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttatttattttcttc 271  Q
    |||||||||| |||||||||||||||| ||| | |||||||||||| |||||||    
T  104412 aggtctatcagattttatagtgtatcaccaacatctaatttatttactttcttc 104465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 104324 - 104353
Alignment:
Q  141 ttaacttatttcttttattcaatttggtcc 170  Q
    ||||||||||||||||||||||||||||||    
T  104324 ttaacttatttcttttattcaatttggtcc 104353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 9318 - 9363
Alignment:
Q  218 aggtctatcatattttatagtgtatcatcaatacctaatttattta 263  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||||    
T  9318 aggtctatcagattttatagtgtatcaccaacacctaatttattta 9363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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