View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17975_high_6 (Length: 256)

Name: NF17975_high_6
Description: NF17975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17975_high_6
NF17975_high_6
[»] chr2 (1 HSPs)
chr2 (7-256)||(3279558-3279807)
[»] chr6 (58 HSPs)
chr6 (8-256)||(26342002-26342250)
chr6 (8-256)||(28098437-28098685)
chr6 (8-256)||(28234435-28234683)
chr6 (7-256)||(28185236-28185485)
chr6 (7-256)||(28180984-28181233)
chr6 (14-252)||(26893543-26893781)
chr6 (7-256)||(28226820-28227069)
chr6 (7-256)||(26936964-26937213)
chr6 (9-256)||(28242676-28242923)
chr6 (115-256)||(28149916-28150056)
chr6 (115-256)||(26646457-26646598)
chr6 (115-256)||(26752425-26752566)
chr6 (144-256)||(27678953-27679065)
chr6 (41-255)||(28781043-28781257)
chr6 (11-255)||(26802316-26802560)
chr6 (144-256)||(27677682-27677794)
chr6 (41-256)||(27611070-27611285)
chr6 (41-256)||(27698562-27698777)
chr6 (149-256)||(27706470-27706577)
chr6 (14-256)||(28325358-28325600)
chr6 (41-255)||(28786182-28786396)
chr6 (41-255)||(28792303-28792517)
chr6 (116-256)||(25579698-25579838)
chr6 (150-254)||(27593090-27593194)
chr6 (7-256)||(28297781-28298030)
chr6 (7-256)||(28514043-28514292)
chr6 (41-256)||(27718447-27718662)
chr6 (41-256)||(27724913-27725128)
chr6 (119-256)||(26142847-26142984)
chr6 (144-256)||(25538547-25538659)
chr6 (50-256)||(28139454-28139660)
chr6 (119-256)||(25481724-25481861)
chr6 (119-256)||(26055908-26056045)
chr6 (119-256)||(26075878-26076015)
chr6 (115-256)||(31284266-31284407)
chr6 (144-256)||(26655996-26656108)
chr6 (144-256)||(26761967-26762079)
chr6 (41-256)||(26622880-26623095)
chr6 (41-256)||(26728858-26729073)
chr6 (41-255)||(27604774-27604988)
chr6 (144-255)||(25506978-25507089)
chr6 (119-256)||(26048827-26048964)
chr6 (119-256)||(26069996-26070133)
chr6 (152-256)||(26884178-26884282)
chr6 (144-256)||(27338133-27338245)
chr6 (144-256)||(27398873-27398985)
chr6 (19-256)||(2184170-2184407)
chr6 (176-256)||(26823879-26823959)
chr6 (20-160)||(27214300-27214440)
chr6 (20-160)||(27234788-27234928)
chr6 (41-252)||(27229136-27229347)
chr6 (80-161)||(26617269-26617350)
chr6 (80-161)||(26723197-26723278)
chr6 (52-89)||(28149590-28149627)
chr6 (134-256)||(2184895-2185017)
chr6 (206-256)||(26975121-26975171)
chr6 (20-161)||(26811392-26811533)
chr6 (115-256)||(26861594-26861735)
[»] scaffold0038 (4 HSPs)
scaffold0038 (8-256)||(34596-34844)
scaffold0038 (7-256)||(27318-27567)
scaffold0038 (9-256)||(42838-43085)
scaffold0038 (14-256)||(116673-116915)
[»] scaffold0019 (1 HSPs)
scaffold0019 (7-256)||(58350-58599)
[»] chr1 (3 HSPs)
chr1 (115-256)||(268412-268553)
chr1 (153-255)||(28127735-28127837)
chr1 (194-256)||(28164417-28164479)
[»] scaffold0419 (1 HSPs)
scaffold0419 (41-255)||(7429-7643)
[»] scaffold0277 (2 HSPs)
scaffold0277 (41-255)||(13701-13915)
scaffold0277 (41-256)||(4739-4954)
[»] scaffold0349 (2 HSPs)
scaffold0349 (41-256)||(3489-3705)
scaffold0349 (41-256)||(14424-14638)
[»] scaffold1254 (1 HSPs)
scaffold1254 (41-222)||(19-200)
[»] chr8 (2 HSPs)
chr8 (115-256)||(29273838-29273979)
chr8 (13-94)||(31903727-31903808)
[»] chr4 (6 HSPs)
chr4 (115-256)||(18655532-18655673)
chr4 (115-256)||(18679622-18679763)
chr4 (115-256)||(18731559-18731700)
chr4 (47-255)||(18699456-18699664)
chr4 (115-256)||(18724140-18724281)
chr4 (8-256)||(5091022-5091270)


Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 7 - 256
Target Start/End: Original strand, 3279558 - 3279807
Alignment:
Q  7 cttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  3279558 cttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctatagagctttaagtgacggt 3279657  T
Q  107 ggattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccgg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3279658 ggattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccgg 3279757  T
Q  207 tcttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3279758 tcttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 3279807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 8 - 256
Target Start/End: Complemental strand, 26342250 - 26342002
Alignment:
Q  8 ttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtg 107  Q
    ||||| ||||||||||| ||||| || ||| | | ||||||||||| || ||||||||||||||||||||| ||| |||||| |||| ||||||||||||    
T  26342250 ttctcatatggattcacatatgatgtgttcctcaattttaggggcattggcactcgctatggttttactggcaatatctatagagctctatgtgacggtg 26342151  T
Q  108 gattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggt 207  Q
    || || |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||| |||||| |||||  |    
T  26342150 gagtccgcaccttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacttgtcaaagccattgaagagtccaggattttcattccaat 26342051  T
Q  208 cttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
     ||||| ||||||||||||||||||   |||||||||||||||||||||    
T  26342050 tttctcaatcaactatgcttcttcttcgttttgtttggacgaacttgtc 26342002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 8 - 256
Target Start/End: Complemental strand, 28098685 - 28098437
Alignment:
Q  8 ttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtg 107  Q
    |||||||||||||||||||||||||| ||  | | |||||||||||| |||||||| ||||||||||||||||||||||| |||||| | |||||||| |    
T  28098685 ttctcttatggattcacctatgacgtgtttcttaattttaggggcaccgacactcggtatggttttactggaaatctctacaaagctctttgtgacggag 28098586  T
Q  108 gattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggt 207  Q
    || || |||||||||||||  |||  || ||||||| |||||||  |||||||||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  28098585 gagtccgcaccttcattgaccataaagatcttcatgaaggtgatagaatcacacaatcccttgtcaaggccatcgaagagtccaggattttaattccggt 28098486  T
Q  208 cttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||  ||||||||||||||| | ||||||||||| |||||||||    
T  28098485 cttctctaagaactatgcttcttctttgttttgtttggatgaacttgtc 28098437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 8 - 256
Target Start/End: Original strand, 28234435 - 28234683
Alignment:
Q  8 ttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtg 107  Q
    ||||| |||||||||||||||||||| ||| | |||||||| || | ||||||||||||||||||||| | ||||||||||| |||| | ||| ||   |    
T  28234435 ttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagg 28234534  T
Q  108 gattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggt 207  Q
    || ||  ||||||||||||||| ||||||||||| ||||| |||||||| |||| ||||||| |||||||||| |||||||| | |||||| ||||| ||    
T  28234535 gaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgt 28234634  T
Q  208 cttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||| |||||||| ||||||||||||  |||||| |||||||||||||||    
T  28234635 cttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtc 28234683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 256
Target Start/End: Original strand, 28185236 - 28185485
Alignment:
Q  7 cttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggt 106  Q
    |||||| |||||||||||||||||||| ||| | || ||||| || | ||||||||| ||| ||||||||||||||||| ||| |||| | ||||||       
T  28185236 cttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagagctctttgtgacaag 28185335  T
Q  107 ggattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccgg 206  Q
    ||| || | |||||||| ||||| || |||||||| |||||||| ||||| |||  ||||||| |||||||||| |||||||| | |||||| ||||| |    
T  28185336 ggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcccg 28185435  T
Q  207 tcttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    |||| |||||||| ||||||||||||  |||||| |||||||||||||||    
T  28185436 tcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtc 28185485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 256
Target Start/End: Original strand, 28180984 - 28181233
Alignment:
Q  7 cttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggt 106  Q
    |||||| |||||||||||||||||||  ||| | || ||||| ||   ||||||||| ||||||||||||||||||||| ||| |||| | ||||||       
T  28180984 cttctcctatggattcacctatgacgcgttccttagctttagaggtggtgacactcgttatggttttactggaaatctcaatagagctctttgtgacaag 28181083  T
Q  107 ggattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccgg 206  Q
    ||| || | |||||||| ||||| || |||||||| |||||||| ||||| |||  ||||||| |||||||||| |||||||| | |||||| ||||| |    
T  28181084 ggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcccg 28181183  T
Q  207 tcttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    |||| |||||||| ||||||||||||  |||||| |||||||||||||||    
T  28181184 tcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtc 28181233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 26893781 - 26893543
Alignment:
Q  14 tatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattct 113  Q
    |||||||||||||| || || ||| | | |||||| ||| |||||||||| | ||||||||| ||  |||| ||||||||| | |||||  ||||| |      
T  26893781 tatggattcacctacgatgtcttcctcaattttagaggctctgacactcgttttggttttacgggtcatctttataaagctctttgtgatagtggaattc 26893682  T
Q  114 gcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctc 213  Q
     |||||||||||||||||  ||||||||| ||||||| |||||| ||| ||||||| ||||||| || |||||||| ||||| |  ||||| ||| ||||    
T  26893681 acaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacattccagtcctctc 26893582  T
Q  214 tatcaactatgcttcttctatattttgtttggacgaact 252  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  26893581 tatcaactatgcttcttctatattttgtttggaagaact 26893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 256
Target Start/End: Original strand, 28226820 - 28227069
Alignment:
Q  7 cttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggt 106  Q
    ||||||||||||||||||||||||||| ||| | |||||||| || | ||||||||| ||||||||||||||||||||||| |  | | | ||| |        
T  28226820 cttctcttatggattcacctatgacgtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaag 28226919  T
Q  107 ggattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccgg 206  Q
    ||| |   ||| ||| |||||||||| |||||||| |||||||||||||| |||  ||||||| |||||| ||| ||||| || | |||||| ||||| |    
T  28226920 ggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctg 28227019  T
Q  207 tcttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    |||| |||||||| ||||||||||||  |||||| |||||||||||||||    
T  28227020 tcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtc 28227069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 256
Target Start/End: Original strand, 26936964 - 26937213
Alignment:
Q  7 cttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggt 106  Q
    ||||||||||||||||||||||||||| ||| | ||||| || ||||| ||||||||||    ||||| |||  |||| || |||||| | |||||  ||    
T  26936964 cttctcttatggattcacctatgacgtgttcctcagtttcagaggcaccgacactcgcttccattttattggtcatctttacaaagctctttgtgattgt 26937063  T
Q  107 ggattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccgg 206  Q
    ||| |  |||||||||||||||| | |||||| |||||||| || |||||||||| ||||||||||||||| || ||||| |||  ||||   || || |    
T  26937064 ggaattcgcaccttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaagattccgggattgccatacctg 26937163  T
Q  207 tcttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    | |||||||||||||||||  |||||  ||||||||||||||||||||||    
T  26937164 tattctctatcaactatgccacttcttcattttgtttggacgaacttgtc 26937213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 28242676 - 28242923
Alignment:
Q  9 tctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtgg 108  Q
    |||| ||||| || |||||||| || ||| | |||||||| || | ||||||||| ||||||||||||||||||||||| |||| | | ||| |    ||    
T  28242676 tctcctatgggtttacctatgatgtcttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaaggg 28242775  T
Q  109 attctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtc 208  Q
    | |  |||||||||||||||| || || ||||  ||||||||  |||| |||| ||||||| |||||||||| |||||||| | |||||| ||||| |||    
T  28242776 aattcgcaccttcattgatgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtc 28242875  T
Q  209 ttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    || |||||||| ||||||||||||  |||||| |||||||||||||||    
T  28242876 ttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtc 28242923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 256
Target Start/End: Original strand, 28149916 - 28150056
Alignment:
Q  115 caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctct 214  Q
    ||||||||||||||||| ||||||| |  |||| || |||||||||| ||||||  |||||||||| |||||||||| |||||| |||||  ||||||||    
T  28149916 caccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcactc-tcaaggccattgaagagtccaggattttcattccaatcttctct 28150014  T
Q  215 atcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||| ||||||||  ||||||||||||||||||||||    
T  28150015 atcaactatacttcttcttcattttgtttggacgaacttgtc 28150056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 256
Target Start/End: Original strand, 26646457 - 26646598
Alignment:
Q  115 caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctct 214  Q
    |||||||||||||||| | || ||| |  |||| ||||||||||||| ||||||  |||||||||| ||||| || | |||||||||||| || || |||    
T  26646457 caccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttct 26646556  T
Q  215 atcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  26646557 atcaactatgcctcttctaaattttgtttggacgaacttgtc 26646598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 256
Target Start/End: Original strand, 26752425 - 26752566
Alignment:
Q  115 caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctct 214  Q
    |||||||||||||||| | || ||| |  |||| ||||||||||||| ||||||  |||||||||| ||||| || | |||||||||||| || || |||    
T  26752425 caccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttct 26752524  T
Q  215 atcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  26752525 atcaactatgcctcttctaaattttgtttggacgaacttgtc 26752566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 27678953 - 27679065
Alignment:
Q  144 gaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgttt 243  Q
    |||| ||||||||||||| ||||||| |||||||||| |||||||| | |||||||||||| || || |||||||||||||| ||||||  |||||||||    
T  27678953 gaggagatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgttt 27679052  T
Q  244 ggacgaacttgtc 256  Q
    |||||||||||||    
T  27679053 ggacgaacttgtc 27679065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 255
Target Start/End: Original strand, 28781043 - 28781257
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    |||||||||||||||||||||||| | |||||||| || |||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  28781043 agttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttc 28781142  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
    |  |||| ||||||||||||| ||||||  |||||||||||||||| || | |||||||||||| || || ||||||||||||||  |||| | ||||||    
T  28781143 aaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactatgccacttcaaaattttg 28781242  T
Q  241 tttggacgaacttgt 255  Q
     ||||||||||||||    
T  28781243 cttggacgaacttgt 28781257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 26802316 - 26802560
Alignment:
Q  11 tcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagct-ttatgtgacggtgga 109  Q
    |||||||||||||| ||  | || ||| | ||||||||||||||||||||||| || |||||||| || |||||||| || ||| |||| ||||   |||    
T  26802316 tcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttat-tgacaaggga 26802414  T
Q  110 ttctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtct 209  Q
     ||   |||||||||||||| |  || |||||  |||| ||||||||||||| ||||||  |||||||||| ||||| || |  ||||||||||| || |    
T  26802415 atccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgt 26802514  T
Q  210 tctctatcaactatgcttcttctatattttgtttggacgaacttgt 255  Q
    | |||||||||||||| ||||| | |||||| ||||||||||||||    
T  26802515 tttctatcaactatgcctcttcaaaattttgcttggacgaacttgt 26802560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 27677794 - 27677682
Alignment:
Q  144 gaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgttt 243  Q
    |||| ||||||||||||| ||||||| |||||||||| |||||||| | |||||||||| | || || |||||||||||||| ||||||  |||||||||    
T  27677794 gaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcattttgttt 27677695  T
Q  244 ggacgaacttgtc 256  Q
    |||||||||||||    
T  27677694 ggacgaacttgtc 27677682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 256
Target Start/End: Complemental strand, 27611285 - 27611070
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  27611285 agttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttc 27611186  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
       |||| ||||||||||||| ||||||  |||||||||| || || || | |||||||||||| || || |||||||||||||| ||||||   |||||    
T  27611185 caagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 27611086  T
Q  241 tttggacgaacttgtc 256  Q
    ||||||||||||||||    
T  27611085 tttggacgaacttgtc 27611070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 256
Target Start/End: Complemental strand, 27698777 - 27698562
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    |||||||||||||||||||||||  | |||||||| ||||||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  27698777 agttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttc 27698678  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
    |  |||| ||||||||||||| ||||||  |||||||||| || || || | |||||||||||| || || ||| |||||||||| ||||||  ||||||    
T  27698677 aaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactatgcatcttcttcattttg 27698578  T
Q  241 tttggacgaacttgtc 256  Q
    ||||||||||||||||    
T  27698577 tttggacgaacttgtc 27698562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 27706577 - 27706470
Alignment:
Q  149 gatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgtttggacg 248  Q
    ||||||||||||| ||||||| |||||||||| |||||||| | |||||||||||| || || ||||||| |||||| ||||||  ||||||||||||||    
T  27706577 gatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacg 27706478  T
Q  249 aacttgtc 256  Q
    ||||||||    
T  27706477 aacttgtc 27706470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 256
Target Start/End: Original strand, 28325358 - 28325600
Alignment:
Q  14 tatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgt-gacggtggattc 112  Q
    |||||||||||||||||||| ||| | |||||||| || | ||||||||| ||||||||||||||||||||||| |||| | | ||| |   | | ||||    
T  28325358 tatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattc 28325457  T
Q  113 tgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttct 212  Q
     | |||||||||||||| |  || |||||  ||||||| ||||| ||||  |||||| |||||||||| |||||||| | |||||| |||||  | || |    
T  28325458 -gtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgt 28325556  T
Q  213 ctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||| ||||||||||||   ||||| ||||| |||||||||    
T  28325557 ctatcaattatgcttcttcttccttttgcttggatgaacttgtc 28325600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 255
Target Start/End: Original strand, 28786182 - 28786396
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  28786182 agttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttc 28786281  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
    |  |||| ||||||||||||| ||||||  |||||||||||||||| || | |||||||||||| || || ||||||||||| ||  | || | ||||||    
T  28786282 aaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaaattttg 28786381  T
Q  241 tttggacgaacttgt 255  Q
     ||||||||||||||    
T  28786382 cttggacgaacttgt 28786396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 255
Target Start/End: Original strand, 28792303 - 28792517
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  28792303 agttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttc 28792402  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
    |  |||| ||||||||||||| ||||||  |||||||||||||||| || | |||||||||||| || || ||||||||||| ||  | || | ||||||    
T  28792403 aaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaaattttg 28792502  T
Q  241 tttggacgaacttgt 255  Q
     ||||||||||||||    
T  28792503 cttggacgaacttgt 28792517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 256
Target Start/End: Original strand, 25579698 - 25579838
Alignment:
Q  116 accttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctcta 215  Q
    |||||| |||||||||  || |||||  |||| ||||||||||||| |||||||||||||||||| ||||| || | ||||||||||||  | || |||     
T  25579698 accttctttgatgataatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctg 25579797  T
Q  216 tcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
     ||||||||| ||||||  ||||||||||||||||||||||    
T  25579798 ccaactatgcatcttcttcattttgtttggacgaacttgtc 25579838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 254
Target Start/End: Complemental strand, 27593194 - 27593090
Alignment:
Q  150 atgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgtttggacga 249  Q
    |||||||||||| ||||||| |||||||||| |||||||| | |||||||||||| || || |||||||||||||| ||||||   ||||||||||||||    
T  27593194 atgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacga 27593095  T
Q  250 acttg 254  Q
    |||||    
T  27593094 acttg 27593090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 256
Target Start/End: Complemental strand, 28298030 - 28297781
Alignment:
Q  7 cttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgt--gacg 104  Q
    |||||| |||||||||||  ||||||| ||| | |||||||| || | |||||| |||||  |||||| |||||||||| | |||| | | |||  || |    
T  28298030 cttctcctatggattcactcatgacgttttcctaagttttagaggtagtgacacacgctacagttttattggaaatctccacaaagatctttgtaggaag 28297931  T
Q  105 gtggattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattcc 204  Q
    | | |||| |||||||||||||||| || |||||| | |||||||| ||||| |||| ||||||| |||||  ||| |||||| | | |||||| |||||    
T  28297930 g-gaattc-gcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcc 28297833  T
Q  205 ggtcttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
     ||||| |||| ||| ||||||||||||  |||||| |||||||||||||||    
T  28297832 tgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtc 28297781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 256
Target Start/End: Original strand, 28514043 - 28514292
Alignment:
Q  7 cttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgt--gacg 104  Q
    |||||| |||||||||||  ||||||| ||| | |||||||| || | |||||| |||||  |||||| |||||||||| | |||| | | |||  || |    
T  28514043 cttctcctatggattcactcatgacgttttcctaagttttagaggtagtgacacacgctacagttttattggaaatctccacaaagatctttgtaggaag 28514142  T
Q  105 gtggattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattcc 204  Q
    | | |||| |||||||||||||||| || |||||| | |||||||| ||||| |||| ||||||| |||||  ||| |||||| | | |||||| |||||    
T  28514143 g-gaattc-gcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcc 28514240  T
Q  205 ggtcttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
     ||||| |||| ||| ||||||||||||  |||||| |||||||||||||||    
T  28514241 tgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtc 28514292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 256
Target Start/End: Complemental strand, 27718662 - 27718447
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    |||||||||||||||||||||||  |  ||||||| ||||||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  27718662 agttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttc 27718563  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
    |  |||| ||||||||||||| ||||||  |||||||||| || || || | |||||||||||| || || |||||||||||||| ||||||   |||||    
T  27718562 aaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 27718463  T
Q  241 tttggacgaacttgtc 256  Q
    ||||||||||||||||    
T  27718462 tttggacgaacttgtc 27718447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 256
Target Start/End: Complemental strand, 27725128 - 27724913
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    |||||||||||||||||||||||  | |||||||| ||||||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  27725128 agttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttc 27725029  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
    |  |||| ||||||||||||| ||||||  |||||||||| || || || | |||||||||||| || || |||||||||||||| | ||||   |||||    
T  27725028 aaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctattcttcgttttg 27724929  T
Q  241 tttggacgaacttgtc 256  Q
    ||||||||||||||||    
T  27724928 tttggacgaacttgtc 27724913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 26142847 - 26142984
Alignment:
Q  119 ttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatca 218  Q
    |||||||||||||  || ||| |  |||| ||||||||||||| |||||||||||||||||| ||||| || | ||||||||||||  | || |||  ||    
T  26142847 ttcattgatgataatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgcca 26142946  T
Q  219 actatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||| ||||||  ||||||||||||||||||||||    
T  26142947 actatgcatcttcttcattttgtttggacgaacttgtc 26142984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 25538547 - 25538659
Alignment:
Q  144 gaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgttt 243  Q
    |||| ||||||||||||| |||||||||||||||||||||||| || |  |||||||||||  | || |||  ||||||||| ||||||  |||||||||    
T  25538547 gaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttcattttgttt 25538646  T
Q  244 ggacgaacttgtc 256  Q
    |||||||||||||    
T  25538647 ggacgaacttgtc 25538659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 256
Target Start/End: Original strand, 28139454 - 28139660
Alignment:
Q  50 ggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttcatggaggtg 149  Q
    |||| ||||||||| |  ||||| |||||||||||||| |||||| |  ||||| ||||| ||  ||| || |||||||||||||||||||| |||||||    
T  28139454 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 28139553  T
Q  150 atgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgtttggacga 249  Q
    | |||||  |||  ||||| || || ||||| ||||| || | |||||| || || || || || ||||||||||| ||||||   ||||| ||||||||    
T  28139554 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttcgttttgcttggacga 28139653  T
Q  250 acttgtc 256  Q
    |||||||    
T  28139654 acttgtc 28139660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 25481724 - 25481861
Alignment:
Q  119 ttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatca 218  Q
    ||||||||||| |  || |||||  |||| ||||||||||||| |||||||||||||||||| ||||| || | ||||| ||||||  | || |||  ||    
T  25481724 ttcattgatgaaaatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgcca 25481823  T
Q  219 actatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||| ||||||  ||||||||||||||||||||||    
T  25481824 actatgcatcttcttcattttgtttggacgaacttgtc 25481861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 26055908 - 26056045
Alignment:
Q  119 ttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatca 218  Q
    ||||||||||| |  || |||||  |||| ||||||||||||  |||||||||||||||||||||||| ||   ||||||||||||  | || |||  ||    
T  26055908 ttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgcca 26056007  T
Q  219 actatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||| ||||||  ||||||||||||||||||||||    
T  26056008 actatgcatcttcttcattttgtttggacgaacttgtc 26056045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 26075878 - 26076015
Alignment:
Q  119 ttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatca 218  Q
    ||||||||||| |  || |||||  |||| ||||||||||||  |||||||||||||||||||||||| ||   ||||||||||||  | || |||  ||    
T  26075878 ttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgcca 26075977  T
Q  219 actatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||| ||||||  ||||||||||||||||||||||    
T  26075978 actatgcatcttcttcattttgtttggacgaacttgtc 26076015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 256
Target Start/End: Original strand, 31284266 - 31284407
Alignment:
Q  115 caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctct 214  Q
    |||||||||||||||||| || |||||  |||| ||||||||||||| |||||| | ||| ||||| |||||||| | ||||||||| || || || |||    
T  31284266 caccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaagagtctaggatttttatccccgtgttttct 31284365  T
Q  215 atcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
      ||||||||| |||||    |||||||||||||||||||||    
T  31284366 gccaactatgcctcttcgtcgttttgtttggacgaacttgtc 31284407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 26655996 - 26656108
Alignment:
Q  144 gaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgttt 243  Q
    |||| ||||||||||||| |||||| || |||||||| ||||| |||| ||||||||||||  | || |||  ||||||||| ||||||  |||||||||    
T  26655996 gaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgttt 26656095  T
Q  244 ggacgaacttgtc 256  Q
    |||||||||||||    
T  26656096 ggacgaacttgtc 26656108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 26761967 - 26762079
Alignment:
Q  144 gaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgttt 243  Q
    |||| ||||||||||||| |||||| || |||||||| ||||| |||| ||||||||||||  | || |||  ||||||||| ||||||  |||||||||    
T  26761967 gaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgttt 26762066  T
Q  244 ggacgaacttgtc 256  Q
    |||||||||||||    
T  26762067 ggacgaacttgtc 26762079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 256
Target Start/End: Original strand, 26622880 - 26623095
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    ||||| || |||| ||||||||| || ||||| |||||||||||||| || ||| |   ||||   ||| ||  |||||||||||||||| | || ||||    
T  26622880 agtttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttc 26622979  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
    |  |||| || ||||||| || |||||||| ||| || ||||||||||| | |||||||||||| || || |||  ||||||||| | ||||  ||||||    
T  26622980 aaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttg 26623079  T
Q  241 tttggacgaacttgtc 256  Q
    |||||| |||||||||    
T  26623080 tttggatgaacttgtc 26623095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 256
Target Start/End: Original strand, 26728858 - 26729073
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    ||||| || |||| ||||||||| || ||||| |||||||||||||| || ||| |   ||||   ||| ||  |||||||||||||||| | || ||||    
T  26728858 agtttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttc 26728957  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
    |  |||| || ||||||| || |||||||| ||| || ||||||||||| | |||||||||||| || || |||  ||||||||| | ||||  ||||||    
T  26728958 aaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttg 26729057  T
Q  241 tttggacgaacttgtc 256  Q
    |||||| |||||||||    
T  26729058 tttggatgaacttgtc 26729073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 255
Target Start/End: Complemental strand, 27604988 - 27604774
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    ||||||||||||||||||||||| || |||||||| || |||||||| || ||| |   ||||   ||| |    |||||||||||||| |  || ||||    
T  27604988 agttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaattcataccttcattgatgaaaatgatcttc 27604889  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
       |||| ||||||||||||| | ||||| |||||||||| || || |||| |||||||||||| || || |||||||| ||||| ||||||   |||||    
T  27604888 gaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccaggatttttattcctgtgttttctatcaaatatgcctcttcttccttttg 27604789  T
Q  241 tttggacgaacttgt 255  Q
    |||||| ||||||||    
T  27604788 tttggatgaacttgt 27604774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 25507089 - 25506978
Alignment:
Q  144 gaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgttt 243  Q
    |||| ||||||||||||| |||| | ||||  ||||| ||||| || | |||||||||||||||  | |||||||||||||| ||||| | |||||||||    
T  25507089 gaggagatgaaatcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttcaaaattttgttt 25506990  T
Q  244 ggacgaacttgt 255  Q
    ||| ||||||||    
T  25506989 ggaggaacttgt 25506978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 26048827 - 26048964
Alignment:
Q  119 ttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatca 218  Q
    |||||||||||||  || ||| |  |||| |||||||||||||    ||||||||||||||| ||||| || | ||||||||||||  | || |||  ||    
T  26048827 ttcattgatgataatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgcca 26048926  T
Q  219 actatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||| ||||||  ||||||||||||||||||||||    
T  26048927 actatgcatcttcttcattttgtttggacgaacttgtc 26048964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 26069996 - 26070133
Alignment:
Q  119 ttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatca 218  Q
    |||||||||||||  || ||| |  |||| |||||||||||||    ||||||||||||||| ||||| || | ||||||||||||  | || |||  ||    
T  26069996 ttcattgatgataatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgcca 26070095  T
Q  219 actatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||| ||||||  ||||||||||||||||||||||    
T  26070096 actatgcatcttcttcattttgtttggacgaacttgtc 26070133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 26884178 - 26884282
Alignment:
Q  152 gaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgtttggacgaac 251  Q
    |||||||||| ||||||  |||||||||| ||||| || |  |||||||||||  | || |||| ||||||||| ||||||  |||||||||||||||||    
T  26884178 gaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcattttgtttggacgaac 26884277  T
Q  252 ttgtc 256  Q
    |||||    
T  26884278 ttgtc 26884282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 27338245 - 27338133
Alignment:
Q  144 gaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgttt 243  Q
    |||| ||||||| ||||| |||||||||||||||||| |||||||| | |||||| |||||  | || |||   |||||||| ||||||  |||||| ||    
T  27338245 gaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgctt 27338146  T
Q  244 ggacgaacttgtc 256  Q
    |||||||||||||    
T  27338145 ggacgaacttgtc 27338133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 27398985 - 27398873
Alignment:
Q  144 gaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgttt 243  Q
    |||| ||||||| ||||| |||||||||||||||||| |||||||| | |||||| |||||  | || |||   |||||||| ||||||  |||||| ||    
T  27398985 gaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgctt 27398886  T
Q  244 ggacgaacttgtc 256  Q
    |||||||||||||    
T  27398885 ggacgaacttgtc 27398873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 256
Target Start/End: Original strand, 2184170 - 2184407
Alignment:
Q  19 attcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcacc 118  Q
    |||||||||| |||| ||| | ||||| || ||  ||||||||||| |||||||||| || ||||| ||  | ||| ||||| |  ||||| ||  |||     
T  2184170 attcacctataacgtgttcctaagtttcagaggagctgacactcgccatggttttaccggcaatctttacgatgctctatgtaaaagtggagtccacact 2184269  T
Q  119 ttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatca 218  Q
    ||||  |||||   |||||||||  |||| | |||||| |||  ||||||| | || ||||| ||||||||||  ||||| || || || ||||| |  |    
T  2184270 ttcaaggatgacgaggagcttcaacgagggggtgaaataacagcatcacttatgaaagccattgaagagtccagaattttcatccctgttttctcaaaga 2184369  T
Q  219 actatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  2184370 actatgcttcttcttcattttgtttggacgaacttgtc 2184407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 26823879 - 26823959
Alignment:
Q  176 gccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||| |||||||| | |||||||||||| || || |||  ||||||||| ||||||  ||||||||||||||||||||||    
T  26823879 gccattgaagagtctaggatttttattcctgtgttttctgccaactatgcctcttcttcattttgtttggacgaacttgtc 26823959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 27214300 - 27214440
Alignment:
Q  20 ttcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcacct 119  Q
    |||| ||||||||| ||| | ||||| ||||| || ||||||||  | ||||| || || ||||||||||||||| | ||||||   ||| || | ||||    
T  27214300 ttcagctatgacgtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaacct 27214399  T
Q  120 tcattgatgatagggagcttcatggaggtgatgaaatcaca 160  Q
    |||||||||| | |||||||||  ||||||| |||||||||    
T  27214400 tcattgatgacaaggagcttcagagaggtgacgaaatcaca 27214440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 27234928 - 27234788
Alignment:
Q  20 ttcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcacct 119  Q
    |||| ||||||||| ||| | ||||| ||||| || ||||||||  | ||||| || || ||||||||||||||| | ||||||   ||| || | ||||    
T  27234928 ttcagctatgacgtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaacct 27234829  T
Q  120 tcattgatgatagggagcttcatggaggtgatgaaatcaca 160  Q
    |||||||||| | |||||||||  ||||||| |||||||||    
T  27234828 tcattgatgacaaggagcttcagagaggtgacgaaatcaca 27234788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 252
Target Start/End: Original strand, 27229136 - 27229347
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    |||||||||||||||||||||||  | |||||||| || |||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  27229136 agttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttc 27229235  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
    |  |||| || |||||||||| |||||| ||||||||||| || || ||   ||||||||||||  | || |||  ||||||||| ||||||  ||||||    
T  27229236 aaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcggatttttattcccatattttctgccaactatgcatcttcttcattttg 27229335  T
Q  241 tttggacgaact 252  Q
    |||| |||||||    
T  27229336 tttgaacgaact 27229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 26617269 - 26617350
Alignment:
Q  80 aatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacac 161  Q
    ||||||||||||||| | ||||||   ||| || | |||||||||||||| | |||||||||  ||||||||||||||||||    
T  26617269 aatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacac 26617350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 26723197 - 26723278
Alignment:
Q  80 aatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacac 161  Q
    ||||||||||||||| | ||||||   ||| || | |||||||||||||| | |||||||||  ||||||||||||||||||    
T  26723197 aatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacac 26723278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 28149590 - 28149627
Alignment:
Q  52 cactgacactcgctatggttttactggaaatctctata 89  Q
    |||||||||||||||||||||||||| |||||||||||    
T  28149590 cactgacactcgctatggttttactgaaaatctctata 28149627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 256
Target Start/End: Original strand, 2184895 - 2185017
Alignment:
Q  134 gagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttcta 233  Q
    ||||||||  |||| | |||||| |||| ||| ||||| || ||||| ||||| ||||  ||||| || || || ||||| |   ||||||||||||||     
T  2184895 gagcttcaacgagggggtgaaataacaccatcgcttgtgaaagccattgaagaatccagaattttcatccctgttttctcaaaggactatgcttcttctt 2184994  T
Q  234 tattttgtttggacgaacttgtc 256  Q
     ||||||||||||||||||||||    
T  2184995 cattttgtttggacgaacttgtc 2185017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 26975121 - 26975171
Alignment:
Q  206 gtcttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||||   ||||||||||||||  ||||||||||||||||||||||    
T  26975121 gtcttctctaaagactatgcttcttcttcattttgtttggacgaacttgtc 26975171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 26811392 - 26811533
Alignment:
Q  20 ttcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcacct 119  Q
    |||| ||||||||| ||| | ||||| ||||| |  |||||||| | ||| || || ||  |||||||||||||| | ||||||   ||| || | ||||    
T  26811392 ttcatctatgacgtgttcattagtttcaggggtatcgacactcgatctggcttcaccggtcatctctataaagctctttgtgacaaaggaatccgaacct 26811491  T
Q  120 tcattgatgatagggagcttcatggaggtgatgaaatcacac 161  Q
    |||||||||| | |||||||||  ||||||| ||||||||||    
T  26811492 tcattgatgacaaggagcttcagagaggtgacgaaatcacac 26811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 256
Target Start/End: Original strand, 26861594 - 26861735
Alignment:
Q  115 caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctct 214  Q
    ||||||||| |||||| | || |||||  |||| |||||||||| |  |||||| | ||| ||||| |||||||| |  ||||| ||||| || || |||    
T  26861594 caccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactcgacaatgccattgaagagtctagaattttcattcctgtgttttct 26861693  T
Q  215 atcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
      ||||||||| |||||   |||||||||||| |||||||||    
T  26861694 gccaactatgcctcttcgtcattttgtttggatgaacttgtc 26861735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 109; Significance: 6e-55; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 8 - 256
Target Start/End: Original strand, 34596 - 34844
Alignment:
Q  8 ttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtg 107  Q
    ||||| |||||||||||||||||||| ||| | |||||||| || | ||||||||||||||||||||| | ||||||||||| |||| | ||| ||   |    
T  34596 ttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagg 34695  T
Q  108 gattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggt 207  Q
    || ||  ||||||||||||||| ||||||||||| ||||| |||||||| |||| ||||||| |||||||||| |||||||| | |||||| ||||| ||    
T  34696 gaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgt 34795  T
Q  208 cttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||| |||||||| ||||||||||||  |||||| |||||||||||||||    
T  34796 cttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtc 34844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 256
Target Start/End: Original strand, 27318 - 27567
Alignment:
Q  7 cttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggt 106  Q
    ||||||||||||||||||||||||||| ||| | |||||||| || | ||||||||| ||||||||||||||||||||||| |  | | | ||| |        
T  27318 cttctcttatggattcacctatgacgtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaag 27417  T
Q  107 ggattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccgg 206  Q
    ||| |   ||| ||| |||||||||| |||||||| |||||||||||||| |||  ||||||| |||||| ||| ||||| || | |||||| ||||| |    
T  27418 ggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctg 27517  T
Q  207 tcttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    |||| |||||||| ||||||||||||  |||||| |||||||||||||||    
T  27518 tcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtc 27567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 42838 - 43085
Alignment:
Q  9 tctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtgg 108  Q
    |||| ||||| || |||||||| || ||| | |||||||| || | ||||||||| ||||||||||||||||||||||| |||| | | ||| |    ||    
T  42838 tctcctatgggtttacctatgatgtcttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaaggg 42937  T
Q  109 attctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtc 208  Q
    | |  |||||||||||||||| || || ||||  ||||||||  |||| |||| ||||||| |||||||||| |||||||| | |||||| ||||| |||    
T  42938 aattcgcaccttcattgatgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtc 43037  T
Q  209 ttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    || |||||||| ||||||||||||  |||||| |||||||||||||||    
T  43038 ttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtc 43085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 256
Target Start/End: Original strand, 116673 - 116915
Alignment:
Q  14 tatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgt-gacggtggattc 112  Q
    |||||||||||||||||||| ||| | |||||||| || | ||||||||| ||||||||||||||||||||||| |||| | | ||| |   | | ||||    
T  116673 tatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattc 116772  T
Q  113 tgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttct 212  Q
     | |||||||||||||| |  || |||||  ||||||| ||||| ||||  |||||| |||||||||| |||||||| | |||||| |||||  | || |    
T  116773 -gtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgt 116871  T
Q  213 ctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||| ||||||||||||   ||||| ||||| |||||||||    
T  116872 ctatcaattatgcttcttcttccttttgcttggatgaacttgtc 116915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 256
Target Start/End: Complemental strand, 58599 - 58350
Alignment:
Q  7 cttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggt 106  Q
    |||||| ||||||||||||||| |||| ||| | || ||||| ||   ||||||||||||||||||||||||||||||||| | |||| | ||||||       
T  58599 cttctcctatggattcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactggaaatctctacagagctctttgtgacaag 58500  T
Q  107 ggattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccgg 206  Q
    ||| || | |||||||| ||||| || |||||||| |||||||| ||||| |||| ||||||| ||||||||||  ||||||| | |||||| ||||| |    
T  58499 ggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggattttcattcccg 58400  T
Q  207 tcttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    |||| |||||||||||||||||||||  |||||| ||| |||||||||||    
T  58399 tcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttgtc 58350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 268553 - 268412
Alignment:
Q  115 caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctct 214  Q
    |||||||||||||||| | || |||||  |||| |||||||||| || |||||| | ||| ||||| |||||||| | |||||||||||| || || |||    
T  268553 caccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttct 268454  T
Q  215 atcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||||| ||||||  ||||||||||||||||||||||    
T  268453 atcaactatgcctcttcttcattttgtttggacgaacttgtc 268412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 28127837 - 28127735
Alignment:
Q  153 aaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgtttggacgaact 252  Q
    |||||||||  |||||| | |||||||| ||||| || |  ||||||||||| || || |||| ||||||||| ||||||  ||||||||||||||||||    
T  28127837 aaatcacaccgtcacttttaaaggccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaact 28127738  T
Q  253 tgt 255  Q
    |||    
T  28127737 tgt 28127735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 28164479 - 28164417
Alignment:
Q  194 atttttattccggtcttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||||| || || |||||||||||||| ||||||  ||||||||||||||||||||||    
T  28164479 atttttattcctgtgttatctatcaactatgcctcttcttcattttgtttggacgaacttgtc 28164417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 255
Target Start/End: Original strand, 7429 - 7643
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    |||||||||||||||||||||||| | |||||||| || |||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  7429 agttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttc 7528  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
    |  |||| ||||||||||||| ||||||  |||||||||||||||| || | |||||||||||| || || ||||||||||| ||  |||| | ||||||    
T  7529 aaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaattttg 7628  T
Q  241 tttggacgaacttgt 255  Q
     ||||||||||||||    
T  7629 cttggacgaacttgt 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 255
Target Start/End: Complemental strand, 13915 - 13701
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    |||||||||||||||||||||||| | |||||||| || |||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  13915 agttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttc 13816  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
    |  |||| ||||||||||||| ||||||  |||||||||||||||| || | |||||||||||| || || ||||||||||| ||  |||| | ||||||    
T  13815 aaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaattttg 13716  T
Q  241 tttggacgaacttgt 255  Q
     ||||||||||||||    
T  13715 cttggacgaacttgt 13701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 256
Target Start/End: Complemental strand, 4954 - 4739
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    ||||||||||||| |||||||||| | |||||||| ||||||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  4954 agttttaggggcattgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttc 4855  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
    |  |||| ||||||||||||| ||| ||   ||||||||| || || || | |||||||||||| || || ||||||  |||||| | ||||   |||||    
T  4854 aaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctaggatttttattcctgtgttttctatcttctatgccttttcttcgttttg 4755  T
Q  241 tttggacgaacttgtc 256  Q
    ||||||||||||||||    
T  4754 tttggacgaacttgtc 4739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 41 - 256
Target Start/End: Complemental strand, 3705 - 3489
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    |||||||||||||||||||||||  | |||||||| ||||||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  3705 agttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttc 3606  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaa-ctatgcttcttctatatttt 239  Q
    |  |||| ||||||||||||| ||||||  |||||||||| || || || | |||||||||||| || || |||||||| |||||| ||||||  |||||    
T  3605 aaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaacctatgcctcttcttcatttt 3506  T
Q  240 gtttggacgaacttgtc 256  Q
    |||||||||||||||||    
T  3505 gtttggacgaacttgtc 3489  T

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Target: scaffold0349; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 41 - 256
Target Start/End: Complemental strand, 14638 - 14424
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    |||||||||||||||||||||||  | |||||||| ||||||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  14638 agttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttc 14539  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 240  Q
    |  |||| ||||||||||||| ||||||  |||||||||| || || || | |||||||||||| || || |||||||||||||| | ||||   |||||    
T  14538 aaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcct-ttcttcgttttg 14440  T
Q  241 tttggacgaacttgtc 256  Q
    ||||||||||||||||    
T  14439 tttggacgaacttgtc 14424  T

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Target: scaffold1254 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 222
Target Start/End: Complemental strand, 200 - 19
Alignment:
Q  41 agttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttc 140  Q
    |||||||||||||||||||||||| | |||||||| || |||||||| || ||| |   ||||   ||| ||   |||||||||||||| |  || ||||    
T  200 agttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttc 101  T
Q  141 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaacta 222  Q
    |  |||| ||||||||||||| ||||||  |||||||||||||||| || | |||||||||||| || || |||||||||||    
T  100 aaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaacta 19  T

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Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 29273979 - 29273838
Alignment:
Q  115 caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctct 214  Q
    |||||||||||||||| | || |||||  |||| |||||||||| |  |||||| | ||| | ||| |||||||| |  ||||||||||| || || |||    
T  29273979 caccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgtcattgaagagtctagaatttttattcctgtgttttct 29273880  T
Q  215 atcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||||| ||||||  ||||||||||||||||||||||    
T  29273879 atcaactatgcctcttcttcattttgtttggacgaacttgtc 29273838  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 31903727 - 31903808
Alignment:
Q  13 ttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagct 94  Q
    ||||||||||||||| || || ||| | || ||||| |||   |||||||||||||||||||||||||||||||| ||||||    
T  31903727 ttatggattcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagct 31903808  T

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Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 18655673 - 18655532
Alignment:
Q  115 caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctct 214  Q
    |||||||||||||||  | ||||| ||  | || |||||||||| || |||||| | ||| |||||  ||||||| | ||| |||||||| || || |||    
T  18655673 caccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttct 18655574  T
Q  215 atcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||||| ||||||  ||||||||||||||||||||||    
T  18655573 atcaactatgcctcttcttcattttgtttggacgaacttgtc 18655532  T

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Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 18679763 - 18679622
Alignment:
Q  115 caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctct 214  Q
    |||||||||||||||  | || || ||  |||| |||||||||| || |||||| | ||| ||||| |||||||| | ||| || ||||| || || |||    
T  18679763 caccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttct 18679664  T
Q  215 atcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||||| ||||||  ||||||||||||||||||||||    
T  18679663 atcaactatgcctcttcttcattttgtttggacgaacttgtc 18679622  T

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Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 18731700 - 18731559
Alignment:
Q  115 caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctct 214  Q
    |||||||||||||||  | || || ||  |||| |||||||||| || |||||| | ||| ||||| |||||||| | ||| || ||||| || || |||    
T  18731700 caccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttct 18731601  T
Q  215 atcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||||| ||||||  ||||||||||||||||||||||    
T  18731600 atcaactatgcctcttcttcattttgtttggacgaacttgtc 18731559  T

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Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 255
Target Start/End: Complemental strand, 18699664 - 18699456
Alignment:
Q  47 aggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtggattctgcaccttcattgatgatagggagcttcatggag 146  Q
    |||||||||||||||||  | |||||||||||  ||||||| |||||| |   ||||   ||| ||  |||||||||||||||  | || || ||  | |    
T  18699664 aggggcactgacactcgtgacggttttactggccatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagtg 18699565  T
Q  147 gtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgtttgga 246  Q
    | |||||||||| || |||||| | ||| ||||| |||||||| | ||| || ||||| || || |||||||||||||| ||||||  ||||||||||||    
T  18699564 gggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttgga 18699465  T
Q  247 cgaacttgt 255  Q
    |||||||||    
T  18699464 cgaacttgt 18699456  T

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Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 18724281 - 18724140
Alignment:
Q  115 caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctct 214  Q
    |||||||||||||||  | || || ||  |||| |||||||||| || |||||| | ||| ||||| |||||||| | ||| || ||||| || || |||    
T  18724281 caccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttct 18724182  T
Q  215 atcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
    ||||||||||| ||||||  |||||||||| |||||||||||    
T  18724181 atcaactatgcctcttcttcattttgtttgaacgaacttgtc 18724140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 256
Target Start/End: Complemental strand, 5091270 - 5091022
Alignment:
Q  8 ttctcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctataaagctttatgtgacggtg 107  Q
    ||||| || ||||| ||||| ||||| ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||| ||||| || ||| |   |    
T  5091270 ttctcctacggatttacctacgacgtctttcttagttttagaggcaccgacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagg 5091171  T
Q  108 gattctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggt 207  Q
    || |   ||||||||||||||| || ||||||||  |||| ||  |||| ||||  |||||| ||||||||||  |||| || | |||| | |||   ||    
T  5091170 gaattcacaccttcattgatgacagagagcttcagcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatctaagattgtcattatcgt 5091071  T
Q  208 cttctctatcaactatgcttcttctatattttgtttggacgaacttgtc 256  Q
     ||||||| | ||||||||||||||   |||||||| || |||||||||    
T  5091070 tttctctaaccactatgcttcttcttcgttttgtttagatgaacttgtc 5091022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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