View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17978_high_2 (Length: 686)

Name: NF17978_high_2
Description: NF17978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17978_high_2
NF17978_high_2
[»] chr2 (5 HSPs)
chr2 (253-672)||(35964159-35964587)
chr2 (74-188)||(35963977-35964091)
chr2 (22-59)||(26684646-26684683)
chr2 (19-59)||(21779287-21779327)
chr2 (19-59)||(31523300-31523340)
[»] chr8 (6 HSPs)
chr8 (563-659)||(45054784-45054885)
chr8 (19-56)||(17823645-17823682)
chr8 (435-529)||(45054609-45054703)
chr8 (19-59)||(8897790-8897830)
chr8 (19-59)||(12670276-12670316)
chr8 (19-59)||(30454123-30454163)
[»] scaffold0180 (1 HSPs)
scaffold0180 (19-59)||(24159-24199)
[»] scaffold0168 (1 HSPs)
scaffold0168 (19-59)||(30646-30686)
[»] scaffold0057 (1 HSPs)
scaffold0057 (19-59)||(24798-24838)
[»] scaffold0015 (1 HSPs)
scaffold0015 (19-59)||(48660-48700)
[»] chr7 (5 HSPs)
chr7 (19-59)||(10693099-10693139)
chr7 (19-59)||(21172035-21172075)
chr7 (19-59)||(32758328-32758368)
chr7 (19-59)||(42391126-42391166)
chr7 (19-59)||(48735148-48735188)
[»] chr6 (2 HSPs)
chr6 (19-59)||(1347031-1347071)
chr6 (19-59)||(1354783-1354823)
[»] chr5 (2 HSPs)
chr5 (19-59)||(8170010-8170050)
chr5 (19-59)||(32703491-32703531)
[»] chr4 (7 HSPs)
chr4 (19-59)||(7909307-7909347)
chr4 (19-59)||(11054174-11054214)
chr4 (19-59)||(20225051-20225091)
chr4 (19-59)||(25463191-25463231)
chr4 (19-59)||(29207924-29207964)
chr4 (19-59)||(38786678-38786718)
chr4 (19-59)||(49796866-49796906)
[»] chr3 (1 HSPs)
chr3 (19-59)||(34771390-34771430)
[»] chr1 (6 HSPs)
chr1 (19-59)||(15505656-15505696)
chr1 (19-59)||(19414529-19414569)
chr1 (19-59)||(32632583-32632623)
chr1 (19-59)||(35253213-35253253)
chr1 (19-59)||(38478308-38478348)
chr1 (19-59)||(45812563-45812603)


Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 253 - 672
Target Start/End: Original strand, 35964159 - 35964587
Alignment:
Q  253 ggaaatgttaacgagtgttcttaagatgttctttaacaactaggcatcacaatggagcatagtggggatgaattttaccttctctgttctcatactttac 352  Q
    |||||||||||||| ||||||||||||  |||||||||| ||||||| ||||| | ||||| ||||||||||||||||||||||  | ||||||||||||    
T  35964159 ggaaatgttaacgaatgttcttaagatactctttaacaattaggcatgacaatagggcataatggggatgaattttaccttctccatcctcatactttac 35964258  T
Q  353 gcccatatatttatctgttaccatgggcggagccatcgtgt--------gtgttcaaatgaaccccctcaactctatacg------ctaaaaatccgtat 438  Q
    ||||||||||||| |||||||||||||||||||||| ||||        |||||||||| |||||||||||||||||| |      ||||||||| ||||    
T  35964259 gcccatatatttacctgttaccatgggcggagccat-gtgttagtcagggtgttcaaataaaccccctcaactctatatgtttacactaaaaatctgtat 35964357  T
Q  439 tttattgactttgaatccccagaaatttgaatgttgaaccatttttgcacctaccttgtctaatctctcctaacttactgcaagctatcacannnnnnnn 538  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  35964358 tttattgactttgaatcccctgaaatttgaatgttgaaccatttttgcacctaccttgtctaatctctcctaacttactgcaagctatcacactctctct 35964457  T
Q  539 nnnntatattaaagctgcaattgcagtcatgcttctctccatttatttatttattaattaaagaaatttaaagctgttgcaataataataaatttattca 638  Q
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35964458 ----tatattaaagctgcaattgcagtcatgcttctctccatttatttatttattaattaaagaaatttaaagctgttgcaataataataaatttattca 35964553  T
Q  639 aatcaataaaatggcatagctctgagtagtattt 672  Q
    ||||||||||||||||||||||||||||||||||    
T  35964554 aatcaataaaatggcatagctctgagtagtattt 35964587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 35963977 - 35964091
Alignment:
Q  74 attgaagaaacggagaacttgaatgttcctaagaaaaacaaatttttagctctttacaagtcaaacgcaaagcgtatacttctaaagctttccaagctaa 173  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35963977 attgaagaaacagagaacttgaatgttcctaagagaaacaaatttctagctctttacaagtcaaacgcaaagcgtctacttctaaagctttccaagctaa 35964076  T
Q  174 aaaagaatcagaagg 188  Q
    |||||||||||||||    
T  35964077 aaaagaatcagaagg 35964091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 26684683 - 26684646
Alignment:
Q  22 aaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  26684683 aaatggtgggacctcttcccgaaccctgcgtatgcggg 26684646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 21779327 - 21779287
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  21779327 accaaatggtgggaccccttcccggaccctgcatatgcggg 21779287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 31523300 - 31523340
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    ||||||||||||||||  ||||| |||||||||||||||||    
T  31523300 accaaatggtggaaccctttcccaaaccctgcatatgcggg 31523340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 563 - 659
Target Start/End: Original strand, 45054784 - 45054885
Alignment:
Q  563 agtcatgcttctctccatttatttatttattaattaaagaaatttaaagctgttgcaataataataaatttattcaaa-----tcaataaaatggcatag 657  Q
    ||||||| ||||||||||||||| ||| |||||||||||| ||||||||||| |||||| | ||||||||||||||||     |||||||||||||||||    
T  45054784 agtcatgtttctctccatttattaattaattaattaaagatatttaaagctgatgcaatcacaataaatttattcaaaatatttcaataaaatggcatag 45054883  T
Q  658 ct 659  Q
    ||    
T  45054884 ct 45054885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 17823645 - 17823682
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgc 56  Q
    |||||||||||||||| |||||||||||||||||||||    
T  17823645 accaaatggtggaaccccttcccgaaccctgcatatgc 17823682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 435 - 529
Target Start/End: Original strand, 45054609 - 45054703
Alignment:
Q  435 gtattttattgactttgaatccccagaaatttgaatgttgaaccatttttgcacctaccttgtctaatctctcctaacttactgcaagctatcac 529  Q
    ||||||||||||| || || || |  |||||||||| ||||||| ||||||||||||   | || |||||||||||| ||  |||||||||||||    
T  45054609 gtattttattgaccttaaaccctctaaaatttgaatattgaaccctttttgcacctatgctctccaatctctcctaatttgttgcaagctatcac 45054703  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 8897830 - 8897790
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  8897830 accaaatggtgggaccccttcccggaccctgcatatgcggg 8897790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 12670316 - 12670276
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  12670316 accaaatggtgggaccccttcccggaccctgcatatgcggg 12670276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 30454163 - 30454123
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  30454163 accaaatggtgggaccccttcccggaccctgcatatgcggg 30454123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 24199 - 24159
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  24199 accaaatggtgggaccccttcccggaccctgcatatgcggg 24159  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 30646 - 30686
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  30646 accaaatggtgggaccccttcccggaccctgcatatgcggg 30686  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 24838 - 24798
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||||||||||| ||||||||    
T  24838 accaaatggtgggaccccttcccgaaccctgcgtatgcggg 24798  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 48700 - 48660
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  48700 accaaatggtgggaccccttcccggaccctgcatatgcggg 48660  T

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Target: chr7 (Bit Score: 29; Significance: 0.000001; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 10693139 - 10693099
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  10693139 accaaatggtgggaccccttcccggaccctgcatatgcggg 10693099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 21172075 - 21172035
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  21172075 accaaatggtgggaccccttcccggaccctgcatatgcggg 21172035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 32758328 - 32758368
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  32758328 accaaatggtgggaccccttcccggaccctgcatatgcggg 32758368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 42391166 - 42391126
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  42391166 accaaatggtgggaccccttcccggaccctgcatatgcggg 42391126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 48735188 - 48735148
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  48735188 accaaatggtgggaccccttcccggaccctgcatatgcggg 48735148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 29; Significance: 0.000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 1347031 - 1347071
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  1347031 accaaatggtgggaccccttcccggaccctgcatatgcggg 1347071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 1354823 - 1354783
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  1354823 accaaatggtgggaccccttcccggaccctgcatatgcggg 1354783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 29; Significance: 0.000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 8170050 - 8170010
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  8170050 accaaatggtgggaccccttcccggaccctgcatatgcggg 8170010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 32703491 - 32703531
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  32703491 accaaatggtgggaccccttcccggaccctgcatatgcggg 32703531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 29; Significance: 0.000001; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 7909347 - 7909307
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||||||||||| ||||||||    
T  7909347 accaaatggtgggaccccttcccgaaccctgcgtatgcggg 7909307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 11054214 - 11054174
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    ||||||||| |||||| ||||||| ||||||||||||||||    
T  11054214 accaaatggcggaaccccttcccggaccctgcatatgcggg 11054174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 20225051 - 20225091
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  20225051 accaaatggtgggaccccttcccggaccctgcatatgcggg 20225091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 25463191 - 25463231
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  25463191 accaaatggtgggaccccttcccggaccctgcatatgcggg 25463231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 29207964 - 29207924
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  29207964 accaaatggtgggaccccttcccggaccctgcatatgcggg 29207924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 38786678 - 38786718
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  38786678 accaaatggtgggaccccttcccggaccctgcatatgcggg 38786718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 49796866 - 49796906
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||||||||||| ||||||||    
T  49796866 accaaatggtgggaccccttcccgaaccctgcgtatgcggg 49796906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 34771430 - 34771390
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  34771430 accaaatggtgggaccccttcccggaccctgcatatgcggg 34771390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 29; Significance: 0.000001; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 15505656 - 15505696
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||||||||||| ||||||||    
T  15505656 accaaatggtgggaccccttcccgaaccctgcgtatgcggg 15505696  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 19414529 - 19414569
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  19414529 accaaatggtgggaccccttcccgtaccctgcatatgcggg 19414569  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 32632623 - 32632583
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| |||||| |||||||||||||||||    
T  32632623 accaaatggtgggaccccttcccaaaccctgcatatgcggg 32632583  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 35253253 - 35253213
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  35253253 accaaatggtgggaccccttcccggaccctgcatatgcggg 35253213  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 38478348 - 38478308
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||||||| |||| || ||||||||||||||||    
T  38478348 accaaatggtggaaccccttctcggaccctgcatatgcggg 38478308  T

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Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 45812603 - 45812563
Alignment:
Q  19 accaaatggtggaacctcttcccgaaccctgcatatgcggg 59  Q
    |||||||||||| ||| |||||| |||||||||||||||||    
T  45812603 accaaatggtgggaccccttcccaaaccctgcatatgcggg 45812563  T

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