View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17978_low_3 (Length: 665)

Name: NF17978_low_3
Description: NF17978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17978_low_3
NF17978_low_3
[»] chr2 (62 HSPs)
chr2 (14-648)||(30717211-30717839)
chr2 (294-406)||(37419767-37419879)
chr2 (306-400)||(26769547-26769641)
chr2 (294-398)||(15657888-15657992)
chr2 (298-412)||(35056896-35057010)
chr2 (296-400)||(11223793-11223896)
chr2 (294-400)||(32749754-32749860)
chr2 (329-398)||(2438661-2438730)
chr2 (491-556)||(30710857-30710922)
chr2 (249-398)||(36756275-36756423)
chr2 (294-400)||(34784911-34785017)
chr2 (294-400)||(36096304-36096410)
chr2 (298-399)||(4882626-4882727)
chr2 (294-399)||(27286222-27286327)
chr2 (495-556)||(30724987-30725048)
chr2 (329-400)||(18840953-18841024)
chr2 (329-400)||(24009343-24009414)
chr2 (329-387)||(12224271-12224329)
chr2 (329-399)||(28596517-28596587)
chr2 (297-399)||(44860347-44860449)
chr2 (296-400)||(12668352-12668456)
chr2 (316-403)||(27084304-27084391)
chr2 (336-403)||(42511319-42511386)
chr2 (255-388)||(14996171-14996297)
chr2 (231-400)||(37558939-37559096)
chr2 (330-398)||(19942314-19942382)
chr2 (166-230)||(30728484-30728548)
chr2 (336-400)||(34993922-34993986)
chr2 (336-400)||(38117099-38117163)
chr2 (294-392)||(28524450-28524548)
chr2 (267-329)||(19536397-19536459)
chr2 (329-389)||(5040782-5040842)
chr2 (329-381)||(5367240-5367292)
chr2 (294-405)||(18889514-18889626)
chr2 (583-639)||(30679476-30679532)
chr2 (329-400)||(15972921-15972992)
chr2 (294-401)||(18420362-18420469)
chr2 (249-329)||(20473302-20473381)
chr2 (491-533)||(30728358-30728400)
chr2 (352-398)||(42832234-42832280)
chr2 (294-335)||(33153448-33153489)
chr2 (329-386)||(37411198-37411255)
chr2 (364-400)||(19536361-19536397)
chr2 (294-334)||(23058437-23058477)
chr2 (341-400)||(15907851-15907910)
chr2 (364-399)||(18255945-18255980)
chr2 (294-329)||(18421987-18422022)
chr2 (325-404)||(19980719-19980798)
chr2 (340-387)||(29176446-29176493)
chr2 (294-332)||(974771-974809)
chr2 (357-399)||(3444827-3444869)
chr2 (295-397)||(17776612-17776714)
chr2 (298-400)||(24975255-24975356)
chr2 (294-323)||(2438725-2438754)
chr2 (358-395)||(27460111-27460148)
chr2 (294-323)||(30404856-30404885)
chr2 (309-358)||(34337152-34337201)
chr2 (342-402)||(3414926-3414986)
chr2 (352-400)||(18631351-18631399)
chr2 (297-329)||(21624294-21624326)
chr2 (337-377)||(30404813-30404853)
chr2 (294-350)||(44635522-44635573)
[»] chr6 (54 HSPs)
chr6 (255-405)||(8365443-8365592)
chr6 (249-401)||(16766677-16766828)
chr6 (294-399)||(31384944-31385048)
chr6 (294-400)||(10339054-10339161)
chr6 (294-405)||(18367860-18367971)
chr6 (294-400)||(5970037-5970143)
chr6 (294-400)||(8714004-8714110)
chr6 (294-400)||(9107299-9107405)
chr6 (294-400)||(9522915-9523021)
chr6 (329-397)||(32978842-32978910)
chr6 (294-400)||(9629407-9629513)
chr6 (294-400)||(16488519-16488625)
chr6 (329-400)||(4877991-4878061)
chr6 (296-402)||(17435225-17435331)
chr6 (336-400)||(17327590-17327654)
chr6 (231-399)||(17841530-17841686)
chr6 (294-358)||(26562713-26562777)
chr6 (232-400)||(28152062-28152217)
chr6 (249-402)||(10770605-10770753)
chr6 (296-398)||(12696350-12696446)
chr6 (329-400)||(34595182-34595253)
chr6 (294-400)||(7248382-7248488)
chr6 (231-402)||(17302518-17302689)
chr6 (267-400)||(3209379-3209518)
chr6 (294-333)||(9911524-9911563)
chr6 (297-400)||(10294134-10294237)
chr6 (329-400)||(28715343-28715414)
chr6 (357-400)||(34446647-34446690)
chr6 (364-402)||(5732472-5732510)
chr6 (329-403)||(7977767-7977841)
chr6 (342-388)||(21044826-21044872)
chr6 (351-400)||(13360313-13360362)
chr6 (296-345)||(21395292-21395341)
chr6 (352-404)||(9027238-9027290)
chr6 (364-400)||(10649371-10649407)
chr6 (352-388)||(21068084-21068120)
chr6 (341-399)||(9658939-9658998)
chr6 (297-400)||(34073278-34073379)
chr6 (352-402)||(7938171-7938221)
chr6 (296-370)||(8931561-8931635)
chr6 (294-327)||(1191702-1191735)
chr6 (325-398)||(5000557-5000630)
chr6 (329-398)||(7265535-7265604)
chr6 (296-329)||(7977830-7977863)
chr6 (352-397)||(9025448-9025493)
chr6 (329-378)||(12627539-12627588)
chr6 (329-407)||(12868609-12868691)
chr6 (296-361)||(25038039-25038104)
chr6 (352-400)||(7625187-7625235)
chr6 (366-402)||(7723197-7723233)
chr6 (345-397)||(7996325-7996377)
chr6 (345-397)||(8022424-8022476)
chr6 (364-400)||(9911482-9911518)
chr6 (352-400)||(34290024-34290072)
[»] chr1 (76 HSPs)
chr1 (294-400)||(47989521-47989627)
chr1 (294-400)||(5944307-5944413)
chr1 (296-388)||(6612112-6612204)
chr1 (294-401)||(32461392-32461498)
chr1 (294-400)||(31694639-31694745)
chr1 (300-400)||(40917779-40917879)
chr1 (232-400)||(6427425-6427594)
chr1 (294-400)||(9828068-9828174)
chr1 (236-400)||(18556385-18556548)
chr1 (298-395)||(9629834-9629931)
chr1 (294-400)||(25934640-25934746)
chr1 (294-398)||(1486646-1486744)
chr1 (296-400)||(30173691-30173795)
chr1 (329-400)||(37598879-37598950)
chr1 (329-400)||(22515827-22515898)
chr1 (329-399)||(40258874-40258944)
chr1 (329-402)||(18337377-18337450)
chr1 (294-401)||(25361910-25362013)
chr1 (309-399)||(21032245-21032335)
chr1 (304-398)||(17778580-17778670)
chr1 (294-351)||(44482254-44482311)
chr1 (352-400)||(1704935-1704983)
chr1 (232-400)||(46348323-46348479)
chr1 (329-400)||(1815305-1815376)
chr1 (329-400)||(51410073-51410144)
chr1 (296-346)||(5376483-5376533)
chr1 (355-400)||(6574051-6574096)
chr1 (294-400)||(17831462-17831566)
chr1 (357-402)||(27965938-27965983)
chr1 (329-398)||(42359391-42359460)
chr1 (339-399)||(10577676-10577736)
chr1 (295-371)||(27471524-27471600)
chr1 (298-350)||(28273067-28273119)
chr1 (356-404)||(36878541-36878589)
chr1 (294-333)||(24577182-24577221)
chr1 (329-400)||(38078601-38078672)
chr1 (329-396)||(39130711-39130778)
chr1 (330-400)||(2896061-2896131)
chr1 (294-404)||(15449166-15449267)
chr1 (336-398)||(16297223-16297285)
chr1 (294-356)||(34371737-34371799)
chr1 (346-400)||(34712323-34712377)
chr1 (294-400)||(36906021-36906126)
chr1 (294-335)||(113323-113364)
chr1 (329-370)||(21530737-21530778)
chr1 (336-401)||(41597409-41597474)
chr1 (352-400)||(113364-113412)
chr1 (255-333)||(1704988-1705065)
chr1 (352-400)||(2218299-2218347)
chr1 (352-400)||(15765829-15765877)
chr1 (296-328)||(18190109-18190141)
chr1 (336-384)||(31015092-31015140)
chr1 (302-389)||(38503352-38503437)
chr1 (364-399)||(48415667-48415702)
chr1 (295-333)||(2218264-2218302)
chr1 (294-332)||(6332694-6332732)
chr1 (354-400)||(21365992-21366038)
chr1 (362-400)||(35702542-35702580)
chr1 (336-386)||(40181926-40181976)
chr1 (352-402)||(48040412-48040462)
chr1 (294-399)||(6414932-6415036)
chr1 (294-387)||(16164257-16164350)
chr1 (296-329)||(19058856-19058889)
chr1 (294-323)||(31015067-31015096)
chr1 (336-400)||(34741901-34741965)
chr1 (294-323)||(40258939-40258968)
chr1 (329-378)||(43492456-43492505)
chr1 (345-389)||(351029-351073)
chr1 (256-321)||(13011223-13011288)
chr1 (329-385)||(19637816-19637872)
chr1 (364-400)||(22947813-22947849)
chr1 (297-329)||(24334705-24334737)
chr1 (352-400)||(29144320-29144368)
chr1 (294-334)||(35919271-35919311)
chr1 (352-400)||(46940748-46940796)
chr1 (298-386)||(48147980-48148068)
[»] chr7 (64 HSPs)
chr7 (294-405)||(24339666-24339777)
chr7 (294-400)||(2334274-2334379)
chr7 (294-400)||(7438730-7438836)
chr7 (294-400)||(5409771-5409871)
chr7 (294-400)||(9778524-9778624)
chr7 (231-399)||(32308082-32308249)
chr7 (300-400)||(25822685-25822785)
chr7 (294-398)||(26033392-26033496)
chr7 (299-397)||(7058455-7058551)
chr7 (270-400)||(32093954-32094079)
chr7 (294-401)||(43027403-43027504)
chr7 (329-400)||(21880200-21880271)
chr7 (254-398)||(9408265-9408408)
chr7 (294-396)||(27229244-27229346)
chr7 (294-399)||(11665370-11665475)
chr7 (305-402)||(41414911-41415008)
chr7 (329-401)||(598256-598328)
chr7 (296-395)||(13770717-13770810)
chr7 (329-399)||(20549839-20549909)
chr7 (298-400)||(21930656-21930758)
chr7 (298-346)||(11272569-11272617)
chr7 (329-401)||(21864856-21864928)
chr7 (254-387)||(6630854-6630986)
chr7 (329-400)||(15680857-15680928)
chr7 (294-377)||(21560527-21560610)
chr7 (329-400)||(33994260-33994331)
chr7 (296-377)||(6028651-6028732)
chr7 (336-380)||(8234201-8234245)
chr7 (294-334)||(18039023-18039063)
chr7 (342-402)||(29763127-29763187)
chr7 (296-399)||(4794915-4795018)
chr7 (336-406)||(1433514-1433584)
chr7 (298-400)||(11831460-11831562)
chr7 (294-376)||(15902846-15902928)
chr7 (346-396)||(40287306-40287356)
chr7 (351-400)||(5307326-5307375)
chr7 (356-397)||(8842282-8842323)
chr7 (599-648)||(9681835-9681884)
chr7 (339-388)||(10043002-10043051)
chr7 (296-373)||(22801697-22801774)
chr7 (296-333)||(27945067-27945104)
chr7 (329-400)||(7133212-7133284)
chr7 (329-401)||(18212972-18213044)
chr7 (352-404)||(40131935-40131987)
chr7 (349-400)||(1401091-1401142)
chr7 (336-399)||(20545185-20545248)
chr7 (329-388)||(26733352-26733411)
chr7 (266-330)||(3991321-3991384)
chr7 (230-264)||(21139057-21139091)
chr7 (295-357)||(26329354-26329416)
chr7 (360-401)||(3991392-3991433)
chr7 (228-285)||(7197340-7197397)
chr7 (336-385)||(15836439-15836488)
chr7 (364-401)||(28155637-28155674)
chr7 (296-395)||(43250019-43250118)
chr7 (336-369)||(48246773-48246806)
chr7 (325-361)||(9933328-9933364)
chr7 (294-334)||(22602705-22602745)
chr7 (342-398)||(22868108-22868164)
chr7 (363-403)||(29812595-29812635)
chr7 (366-402)||(30813882-30813918)
chr7 (364-400)||(35862034-35862070)
chr7 (296-332)||(43243103-43243139)
chr7 (347-395)||(45056874-45056922)
[»] chr3 (64 HSPs)
chr3 (249-400)||(41961579-41961729)
chr3 (240-398)||(4987222-4987380)
chr3 (294-400)||(34185052-34185158)
chr3 (234-400)||(14209079-14209243)
chr3 (231-388)||(28812477-28812633)
chr3 (294-398)||(28918025-28918120)
chr3 (329-400)||(40993275-40993346)
chr3 (298-399)||(14216920-14217021)
chr3 (298-399)||(14223049-14223150)
chr3 (298-402)||(15796221-15796325)
chr3 (294-400)||(49651716-49651821)
chr3 (294-401)||(27505270-27505371)
chr3 (232-398)||(29508407-29508567)
chr3 (298-400)||(8039764-8039866)
chr3 (294-376)||(14832123-14832205)
chr3 (329-402)||(55401123-55401196)
chr3 (232-400)||(20503429-20503584)
chr3 (298-400)||(16789040-16789141)
chr3 (329-401)||(10955000-10955075)
chr3 (249-399)||(15999951-16000095)
chr3 (336-400)||(7171556-7171620)
chr3 (329-405)||(13845460-13845536)
chr3 (249-396)||(14829670-14829816)
chr3 (231-350)||(34910279-34910397)
chr3 (294-400)||(55212987-55213092)
chr3 (336-389)||(3631739-3631792)
chr3 (329-399)||(8789489-8789561)
chr3 (304-405)||(13806270-13806370)
chr3 (296-399)||(37077384-37077488)
chr3 (294-357)||(750590-750653)
chr3 (296-351)||(16192728-16192783)
chr3 (346-400)||(5407199-5407253)
chr3 (330-400)||(8842378-8842448)
chr3 (294-396)||(11665968-11666070)
chr3 (352-402)||(16789583-16789633)
chr3 (352-401)||(25074866-25074915)
chr3 (338-399)||(32804485-32804546)
chr3 (352-400)||(3163971-3164019)
chr3 (352-404)||(8039289-8039341)
chr3 (336-399)||(15864887-15864950)
chr3 (249-323)||(35994744-35994816)
chr3 (352-400)||(40052383-40052431)
chr3 (352-399)||(1389909-1389956)
chr3 (294-345)||(1509563-1509614)
chr3 (364-403)||(4990909-4990948)
chr3 (294-329)||(25775533-25775568)
chr3 (325-380)||(34307735-34307790)
chr3 (298-400)||(17005548-17005650)
chr3 (255-355)||(21479104-21479198)
chr3 (356-401)||(2408589-2408634)
chr3 (294-335)||(3164019-3164060)
chr3 (363-400)||(3730108-3730145)
chr3 (336-400)||(5440967-5441032)
chr3 (255-333)||(14747547-14747625)
chr3 (294-323)||(26508134-26508163)
chr3 (352-400)||(4466540-4466588)
chr3 (296-332)||(4990964-4991000)
chr3 (296-400)||(9800066-9800170)
chr3 (352-400)||(10455867-10455915)
chr3 (352-400)||(11610580-11610628)
chr3 (352-400)||(21211365-21211413)
chr3 (294-334)||(25948882-25948922)
chr3 (336-400)||(26492145-26492209)
chr3 (329-361)||(45451601-45451633)
[»] chr5 (62 HSPs)
chr5 (296-399)||(21542056-21542159)
chr5 (296-402)||(21522776-21522882)
chr5 (296-402)||(21533342-21533448)
chr5 (294-400)||(39698565-39698671)
chr5 (294-401)||(7677729-7677836)
chr5 (255-400)||(31084309-31084447)
chr5 (294-399)||(6401522-6401627)
chr5 (294-387)||(19579725-19579818)
chr5 (294-401)||(21576684-21576780)
chr5 (298-388)||(15382507-15382592)
chr5 (294-400)||(21814285-21814391)
chr5 (329-398)||(30502330-30502399)
chr5 (329-398)||(30542673-30542742)
chr5 (254-376)||(30183534-30183655)
chr5 (294-400)||(37328775-37328879)
chr5 (294-399)||(3966527-3966632)
chr5 (329-397)||(39268541-39268609)
chr5 (230-323)||(14674230-14674322)
chr5 (294-389)||(17088309-17088399)
chr5 (330-400)||(17123097-17123166)
chr5 (329-398)||(21190998-21191067)
chr5 (255-345)||(21351889-21351978)
chr5 (294-398)||(23015926-23016024)
chr5 (329-400)||(28588614-28588685)
chr5 (231-398)||(43001762-43001922)
chr5 (329-400)||(43564929-43565000)
chr5 (294-400)||(30098350-30098456)
chr5 (294-400)||(40131645-40131751)
chr5 (308-397)||(19452998-19453087)
chr5 (340-401)||(21194062-21194123)
chr5 (336-400)||(14873577-14873641)
chr5 (296-376)||(36642716-36642795)
chr5 (294-402)||(41091184-41091292)
chr5 (329-396)||(30098982-30099049)
chr5 (329-400)||(42893408-42893479)
chr5 (336-400)||(19820328-19820389)
chr5 (340-398)||(24238603-24238661)
chr5 (298-347)||(21319927-21319976)
chr5 (348-405)||(38464308-38464365)
chr5 (336-401)||(39205940-39206005)
chr5 (294-346)||(13287383-13287434)
chr5 (294-400)||(19552476-19552578)
chr5 (336-400)||(32630675-32630739)
chr5 (231-286)||(6035445-6035500)
chr5 (294-329)||(6247646-6247681)
chr5 (297-400)||(11685966-11686068)
chr5 (294-329)||(15884012-15884047)
chr5 (294-388)||(6418056-6418150)
chr5 (338-400)||(16304366-16304428)
chr5 (255-323)||(21191062-21191129)
chr5 (350-388)||(39342511-39342549)
chr5 (294-323)||(7218273-7218302)
chr5 (267-333)||(30135311-30135377)
chr5 (363-400)||(35017125-35017162)
chr5 (336-401)||(42029807-42029872)
chr5 (325-389)||(43554570-43554634)
chr5 (360-396)||(4105338-4105374)
chr5 (336-400)||(6770596-6770655)
chr5 (364-400)||(10298633-10298669)
chr5 (364-400)||(22423764-22423800)
chr5 (336-400)||(27932290-27932354)
chr5 (352-400)||(39695951-39695998)
[»] scaffold0136 (1 HSPs)
scaffold0136 (294-400)||(3778-3884)
[»] chr8 (68 HSPs)
chr8 (255-402)||(22651962-22652108)
chr8 (255-402)||(15816056-15816202)
chr8 (255-400)||(29510233-29510377)
chr8 (294-402)||(28745522-28745630)
chr8 (294-399)||(29447040-29447145)
chr8 (300-400)||(4673354-4673454)
chr8 (294-401)||(6065585-6065692)
chr8 (294-400)||(34450961-34451072)
chr8 (294-400)||(11803283-11803389)
chr8 (298-402)||(21465440-21465544)
chr8 (294-369)||(2572016-2572091)
chr8 (231-402)||(36450692-36450851)
chr8 (294-400)||(8343340-8343446)
chr8 (294-400)||(26902104-26902210)
chr8 (336-400)||(31557051-31557115)
chr8 (329-400)||(18407767-18407838)
chr8 (294-400)||(22197671-22197777)
chr8 (329-403)||(3951473-3951547)
chr8 (329-401)||(33405323-33405395)
chr8 (329-396)||(5813640-5813707)
chr8 (336-398)||(3025606-3025668)
chr8 (294-400)||(11927015-11927121)
chr8 (294-400)||(11944689-11944795)
chr8 (329-399)||(43737752-43737822)
chr8 (340-388)||(22943301-22943349)
chr8 (294-357)||(24362173-24362237)
chr8 (295-377)||(12570461-12570542)
chr8 (350-400)||(13397620-13397670)
chr8 (343-385)||(14639745-14639787)
chr8 (294-332)||(25566865-25566903)
chr8 (307-400)||(27067231-27067322)
chr8 (329-398)||(15023199-15023268)
chr8 (329-398)||(20679337-20679406)
chr8 (352-400)||(8798793-8798841)
chr8 (356-400)||(13436910-13436954)
chr8 (329-400)||(17751703-17751775)
chr8 (329-400)||(17760690-17760762)
chr8 (352-400)||(22204714-22204762)
chr8 (294-401)||(24858036-24858136)
chr8 (352-400)||(30067968-30068016)
chr8 (364-404)||(34127168-34127208)
chr8 (329-389)||(40332239-40332299)
chr8 (294-401)||(41831874-41831975)
chr8 (296-398)||(44067542-44067644)
chr8 (294-329)||(4948676-4948711)
chr8 (364-403)||(9383049-9383088)
chr8 (352-399)||(13009423-13009469)
chr8 (342-409)||(14134760-14134827)
chr8 (298-329)||(15023257-15023288)
chr8 (336-402)||(39820483-39820549)
chr8 (329-384)||(44462151-44462206)
chr8 (329-384)||(44469684-44469739)
chr8 (350-400)||(13403175-13403225)
chr8 (294-401)||(18964201-18964310)
chr8 (329-399)||(24205749-24205819)
chr8 (357-395)||(31109463-31109501)
chr8 (336-389)||(126298-126351)
chr8 (296-329)||(24669459-24669492)
chr8 (297-385)||(28384937-28385026)
chr8 (294-323)||(40332215-40332244)
chr8 (336-400)||(7253627-7253691)
chr8 (294-330)||(8342996-8343032)
chr8 (352-400)||(8343038-8343086)
chr8 (336-400)||(16641909-16641973)
chr8 (325-373)||(26915202-26915250)
chr8 (294-322)||(30077394-30077422)
chr8 (365-401)||(31514938-31514974)
chr8 (352-400)||(33389295-33389343)
[»] chr4 (68 HSPs)
chr4 (249-400)||(19482648-19482798)
chr4 (294-399)||(30982808-30982913)
chr4 (336-400)||(28964188-28964252)
chr4 (294-400)||(24613630-24613736)
chr4 (329-400)||(16073442-16073513)
chr4 (329-400)||(23292926-23292997)
chr4 (294-400)||(715545-715642)
chr4 (294-400)||(752871-752968)
chr4 (294-400)||(5414101-5414207)
chr4 (296-373)||(37496730-37496807)
chr4 (294-398)||(19312359-19312463)
chr4 (340-400)||(29205527-29205587)
chr4 (296-399)||(847977-848080)
chr4 (297-399)||(3947702-3947798)
chr4 (294-400)||(22234819-22234925)
chr4 (294-400)||(47264010-47264116)
chr4 (294-397)||(28084546-28084640)
chr4 (329-400)||(49431074-49431145)
chr4 (294-400)||(903946-904052)
chr4 (342-400)||(3064868-3064926)
chr4 (294-400)||(46083920-46084026)
chr4 (329-398)||(4157484-4157553)
chr4 (233-331)||(30298910-30299008)
chr4 (233-331)||(30327778-30327876)
chr4 (298-395)||(30838238-30838335)
chr4 (294-387)||(38148667-38148760)
chr4 (294-400)||(11931304-11931410)
chr4 (295-410)||(19500777-19500892)
chr4 (329-396)||(21945551-21945618)
chr4 (294-377)||(27706129-27706212)
chr4 (298-344)||(12708175-12708221)
chr4 (329-401)||(12895213-12895285)
chr4 (336-399)||(14465006-14465069)
chr4 (325-400)||(16184875-16184950)
chr4 (329-400)||(34306744-34306815)
chr4 (329-400)||(35157925-35157996)
chr4 (330-400)||(8423658-8423728)
chr4 (294-344)||(11596337-11596387)
chr4 (352-398)||(22440559-22440605)
chr4 (294-400)||(36635348-36635449)
chr4 (329-398)||(4157197-4157266)
chr4 (599-648)||(13548213-13548262)
chr4 (339-400)||(18966567-18966628)
chr4 (294-350)||(4383391-4383447)
chr4 (296-400)||(5225542-5225646)
chr4 (366-398)||(7424742-7424774)
chr4 (491-559)||(11358116-11358184)
chr4 (325-404)||(20521781-20521861)
chr4 (325-400)||(24343556-24343632)
chr4 (352-399)||(5922532-5922579)
chr4 (294-329)||(12797338-12797373)
chr4 (294-401)||(12895054-12895151)
chr4 (231-323)||(29205408-29205497)
chr4 (337-400)||(32273461-32273524)
chr4 (337-400)||(35161092-35161155)
chr4 (294-329)||(42640553-42640588)
chr4 (294-387)||(21873315-21873406)
chr4 (294-387)||(21929176-21929267)
chr4 (296-350)||(51701284-51701338)
chr4 (363-400)||(5775304-5775341)
chr4 (365-402)||(7970584-7970621)
chr4 (329-370)||(29205492-29205533)
chr4 (352-400)||(11596297-11596345)
chr4 (294-334)||(13134474-13134514)
chr4 (352-400)||(17876237-17876285)
chr4 (352-400)||(18513175-18513223)
chr4 (294-322)||(28964255-28964283)
chr4 (309-361)||(53490732-53490784)
[»] scaffold0003 (1 HSPs)
scaffold0003 (255-400)||(241580-241724)
[»] scaffold0450 (1 HSPs)
scaffold0450 (256-400)||(8564-8707)
[»] scaffold0019 (1 HSPs)
scaffold0019 (294-400)||(71749-71855)
[»] scaffold0044 (1 HSPs)
scaffold0044 (294-389)||(53204-53299)
[»] scaffold0306 (1 HSPs)
scaffold0306 (255-398)||(13386-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (255-398)||(21804-21941)
[»] scaffold0086 (1 HSPs)
scaffold0086 (294-401)||(2952-3059)
[»] scaffold0793 (1 HSPs)
scaffold0793 (294-400)||(4821-4918)
[»] scaffold0008 (1 HSPs)
scaffold0008 (295-398)||(263303-263406)
[»] scaffold0380 (1 HSPs)
scaffold0380 (342-400)||(8662-8720)
[»] scaffold0171 (2 HSPs)
scaffold0171 (294-400)||(23535-23641)
scaffold0171 (294-334)||(23444-23484)
[»] scaffold0004 (2 HSPs)
scaffold0004 (296-399)||(92833-92940)
scaffold0004 (294-328)||(123652-123686)
[»] scaffold0623 (1 HSPs)
scaffold0623 (294-399)||(5926-6031)
[»] scaffold0036 (1 HSPs)
scaffold0036 (294-398)||(9678-9782)
[»] scaffold0652 (1 HSPs)
scaffold0652 (329-399)||(403-473)
[»] scaffold0512 (1 HSPs)
scaffold0512 (329-403)||(4973-5047)
[»] scaffold0123 (1 HSPs)
scaffold0123 (294-368)||(44486-44560)
[»] scaffold0361 (1 HSPs)
scaffold0361 (336-400)||(14582-14646)
[»] scaffold0053 (1 HSPs)
scaffold0053 (329-400)||(8846-8917)
[»] scaffold0057 (1 HSPs)
scaffold0057 (297-400)||(24052-24155)
[»] scaffold0122 (1 HSPs)
scaffold0122 (294-399)||(8690-8795)
[»] scaffold0475 (1 HSPs)
scaffold0475 (336-400)||(3363-3427)
[»] scaffold0154 (1 HSPs)
scaffold0154 (310-401)||(13453-13544)
[»] scaffold0025 (1 HSPs)
scaffold0025 (294-332)||(23794-23832)
[»] scaffold0697 (1 HSPs)
scaffold0697 (329-370)||(1692-1733)
[»] scaffold0050 (1 HSPs)
scaffold0050 (329-402)||(70326-70399)
[»] scaffold0223 (1 HSPs)
scaffold0223 (294-334)||(20196-20236)
[»] scaffold0279 (1 HSPs)
scaffold0279 (306-369)||(17840-17903)
[»] scaffold0103 (1 HSPs)
scaffold0103 (352-399)||(51894-51941)
[»] scaffold0083 (2 HSPs)
scaffold0083 (329-400)||(45470-45541)
scaffold0083 (296-329)||(45530-45563)
[»] scaffold0021 (2 HSPs)
scaffold0021 (341-400)||(2978-3037)
scaffold0021 (294-323)||(130506-130535)
[»] scaffold0007 (1 HSPs)
scaffold0007 (296-403)||(225194-225301)


Alignment Details
Target: chr2 (Bit Score: 482; Significance: 0; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 14 - 648
Target Start/End: Complemental strand, 30717839 - 30717211
Alignment:
Q  14 caaaggtaaaataacttcaaacgtaaacgtaatcaaatataaaataccatcaattttagggtaattaaacatatatatcgattgcccaatacataggcaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  30717839 caaaggtaaaataacttcaaacgtaaacgtaatcaaatataaaataccatcaattttagggtaattaaacatatatattgattgtccagtacataggcaa 30717740  T
Q  114 acgtagttacatcttcttgtagaaaatacaaaatattcacaaacttgccagcactaatatacaaacctatcttttggccaaaaatactgtcaccatat-- 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  30717739 acgtagttacatcttcttgtagaaaatacaaaatattcacaaacttgccagcactaatatacaaacctatcttttggccaaaaatattgtcaccatatat 30717640  T
Q  212 gtagacaattacttgcaggctatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaa 311  Q
    |||||||||||||||||||||||||||| ||       |||  |||||||||||||||||| | |||||||||||       ||||||||||||||||||    
T  30717639 gtagacaattacttgcaggctatgaagcgcg-------acacggacactgacaaaccgacaaagctaataatttgaaaaaa-tcacataattcagtgtaa 30717548  T
Q  312 ttacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagcttgtaggtaa 411  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||    
T  30717547 ttacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatagcttataggtaa 30717448  T
Q  412 catcatatacttgtcataagcaaaagagacattgtagacatgtaccacttgattctacaacctaataataatcaaatgaaaattcaagtatggcaaaaga 511  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30717447 catcatatacttgtcataagcaaaagagacattgtagacatgcaccacttgattctacaacctaataataatcaaatgaaaattcaagtatggcaaaaga 30717348  T
Q  512 gactcctttcttaaatgagtacaacttctccttgaattcttcaatgaccttagattcaatcctgcatgcattagcaatggagaaactcatcctttcaagc 611  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||   |||||||||||||  |||||||||||||| ||||||    
T  30717347 gactcctttcttaaatgagtacaacttctccttgaattcttcaataaccttagaatcaatctgccatgcattagcaaaagagaaactcatcctctcaagc 30717248  T
Q  612 actataccattttccattaaatatttagctaagaaaa 648  Q
    |||||||||||||||||||||||||||||||||||||    
T  30717247 actataccattttccattaaatatttagctaagaaaa 30717211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 294 - 406
Target Start/End: Original strand, 37419767 - 37419879
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| ||||||||||||||||||||| || |||||||||| ||||||||||||  | |||||||||| |||||||||||||||| |||||||||| |||    
T  37419767 tcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 37419866  T
Q  394 ttcatagcttgta 406  Q
    ||||||| |||||    
T  37419867 ttcataggttgta 37419879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 306 - 400
Target Start/End: Original strand, 26769547 - 26769641
Alignment:
Q  306 gtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||||||| |||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  26769547 gtgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 294 - 398
Target Start/End: Original strand, 15657888 - 15657992
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||| ||||| |||||||| | |||||||| |||||| |||||||| | |||||||||||| ||| ||||||||||||||    
T  15657888 tcacataattcagtgtaattacaaatgtcggtgtcgtgttgatgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgc 15657987  T
Q  394 ttcat 398  Q
    |||||    
T  15657988 ttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 298 - 412
Target Start/End: Original strand, 35056896 - 35057010
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    ||||||||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |  ||||||||||||  |||||||||| |||||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttca 35056995  T
Q  398 tagcttgtaggtaac 412  Q
    |||||| || |||||    
T  35056996 tagcttataagtaac 35057010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 296 - 400
Target Start/End: Complemental strand, 11223896 - 11223793
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||||||||||||||||||||||||||| |||| ||| | ||||||||||||||| |||| ||||| |||||||||||||||  |||||||||| |||||    
T  11223896 acataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgctt 11223798  T
Q  396 catag 400  Q
    |||||    
T  11223797 catag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 32749860 - 32749754
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||| | |||||||  |||||||||| ||||||||  ||||  |||||||||||||||||||||| ||| |||||||||||  ||    
T  32749860 tcacataattcagtgtaataataagtgtcagtgtcgtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtccgcgc 32749761  T
Q  394 ttcatag 400  Q
    |||||||    
T  32749760 ttcatag 32749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 329 - 398
Target Start/End: Complemental strand, 2438730 - 2438661
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||    
T  2438730 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 491 - 556
Target Start/End: Complemental strand, 30710922 - 30710857
Alignment:
Q  491 aaattcaagtatggcaaaagagactcctttcttaaatgagtacaacttctccttgaattcttcaat 556  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  30710922 aaattcaagtatggcaaaagagactcctttcttgaatgagtacagcttctccttaaattcttcaat 30710857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 249 - 398
Target Start/End: Complemental strand, 36756423 - 36756275
Alignment:
Q  249 gacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgac 348  Q
    |||| |||||||||||   |||||||||||||||||||       | ||||||||||||||||||| |||||||| ||||||||   ||||| |||| ||    
T  36756423 gacacagacactgacacgtcgacacaactaataatttgaagaaa-taacataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacacaac 36756325  T
Q  349 acatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    ||||||||||||| |  ||||||||||||| |||||||||  ||||||||    
T  36756324 acatgtccgacaccgcaacacgcctaatcctaggagtgtctgtgcttcat 36756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 34785017 - 34784911
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||| |||||||||| | |||||| |||||||||| | ||||||||||||| |||| ||||| ||||||||||| || | |||||||||  |||    
T  34785017 tcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacacctgtctgacacggggacacgccttattcgaggagtgtctgtgc 34784918  T
Q  394 ttcatag 400  Q
    |||||||    
T  34784917 ttcatag 34784911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 36096410 - 36096304
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| ||| ||||||||||| |  ||||| |||||||||| ||||||||||||||| |||| ||||| ||||||||||| | |||| |||||||| |||    
T  36096410 tcacaaaatgcagtgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgtctgacacggggacacgccttaaccaaagagtgtccgtgc 36096311  T
Q  394 ttcatag 400  Q
    |||||||    
T  36096310 ttcatag 36096304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 298 - 399
Target Start/End: Complemental strand, 4882727 - 4882626
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||| | |||  | |||| |||||| | |||||| || ||||||||    
T  4882727 ataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacgatacatgtcgggcacctgaacacacctaattcgaggagtatctatgcttca 4882628  T
Q  398 ta 399  Q
    ||    
T  4882627 ta 4882626  T

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Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 294 - 399
Target Start/End: Complemental strand, 27286327 - 27286222
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||| |||||||||| | ||||| ||||| ||||| |||||||||||||||||||||||||| ||||||   |||||| || |||||||  |||    
T  27286327 tcacataattaagtgtaattataggtgtcaatgtcatgtcgatgtcggacacgacacatgtccgacaccgggacatatctaatctaaagagtgtctgtgc 27286228  T
Q  394 ttcata 399  Q
    ||||||    
T  27286227 ttcata 27286222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 495 - 556
Target Start/End: Complemental strand, 30725048 - 30724987
Alignment:
Q  495 tcaagtatggcaaaagagactcctttcttaaatgagtacaacttctccttgaattcttcaat 556  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  30725048 tcaagtatggcaaaagagactcctttcttgaatgagtacagcttctccttaaattcttcaat 30724987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 18841024 - 18840953
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| |||| ||||||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||||    
T  18841024 gtgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 24009343 - 24009414
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||| ||||||||||    
T  24009343 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 329 - 387
Target Start/End: Original strand, 12224271 - 12224329
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgt 387  Q
    |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  12224271 gtgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgt 12224329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 329 - 399
Target Start/End: Original strand, 28596517 - 28596587
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||| ||||||||||||||| ||||||||||| |||||| |||||||| |||||||||| |||||||||    
T  28596517 gtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 44860347 - 44860449
Alignment:
Q  297 cataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttc 396  Q
    |||||||||||||||||| | |||||| |||||||| | ||| ||||||||||  |||||||||  ||||||| |||||| | |||||||||| ||||||    
T  44860347 cataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttc 44860446  T
Q  397 ata 399  Q
    |||    
T  44860447 ata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 296 - 400
Target Start/End: Complemental strand, 12668456 - 12668352
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    ||||||||||||||||||| |||||||| |||||||||| | | ||| ||||||| | || |||| |||||||| |||||| | |||||| ||| |||||    
T  12668456 acataattcagtgtaattataagtgtcggtgtcgtgtcggtattggatacgacacgtatctgacattgggacacacctaattcgaggagtatccgtgctt 12668357  T
Q  396 catag 400  Q
    |||||    
T  12668356 catag 12668352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 316 - 403
Target Start/End: Original strand, 27084304 - 27084391
Alignment:
Q  316 aagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagctt 403  Q
    |||||||||| || ||||| ||||||||||||||| ||||| |||| | |||||||||||||  |||||||||  |||||||||||||    
T  27084304 aagtgtcgatttcatgtcggtgtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcatagctt 27084391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 336 - 403
Target Start/End: Complemental strand, 42511386 - 42511319
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagctt 403  Q
    |||||||||| |||| |||||||||| |||||||| ||||||| |||||||||| |||||||||||||    
T  42511386 tgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatagctt 42511319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 255 - 388
Target Start/End: Complemental strand, 14996297 - 14996171
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgt 354  Q
    ||||||||||| |||||||| |||||||||||       ||| |||||| ||||||||||||||||||| ||||      ||||||||||| |||| |||    
T  14996297 gacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtc------ttgtcggacac-acacgtgt 14996205  T
Q  355 ccgacactgggacacgcctaatccaaggagtgtc 388  Q
    | ||||| || ||||||||||||| |||||||||    
T  14996204 ctgacaccggaacacgcctaatccgaggagtgtc 14996171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 400
Target Start/End: Original strand, 37558939 - 37559096
Alignment:
Q  231 ctatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgt 330  Q
    ||||||||||||||||| ||||  ||||||||||  |||||||| |||||||||||       |||||||||||| |||||||||||           ||    
T  37558939 ctatgaagcacggatacggacacggacactgacacgccgacacagctaataatttg-taaaaatcacataattcaatgtaattacaa-----------gt 37559026  T
Q  331 gtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||| ||||||||  ||||| |||||||||| || |||||| |||||| |||||||||| ||||||||||    
T  37559027 gtcggtgtcggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 330 - 398
Target Start/End: Original strand, 19942314 - 19942382
Alignment:
Q  330 tgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    ||||| ||||||||||| ||  |||| ||||| |||||||||||||||| |||||||||||||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 30728548 - 30728484
Alignment:
Q  166 actaatatacaaacctatcttttggccaaaaatactgtcaccatatgtagacaattacttgcagg 230  Q
    |||||| || || |||||||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  30728548 actaatttagaagcctatcttttggccaaaaatacagtcaccatatttagacaatttcttgcagg 30728484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 34993986 - 34993922
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||| ||||||||  ||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  34993986 tgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatag 34993922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 38117163 - 38117099
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| |||| |||||||||| |||||||||||||||| ||| |||||| ||||||||||    
T  38117163 tgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 28524450 - 28524548
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatg 392  Q
    ||||||||||||||||||||| | |||||| ||| |||| | |||||||||| |||| |||| ||||| |  ||||||||||||  || ||||||||||    
T  28524450 tcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgtctgacacagaaacacgcctaatctgagaagtgtccatg 28524548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 267 - 329
Target Start/End: Complemental strand, 19536459 - 19536397
Alignment:
Q  267 ccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcg 329  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||    
T  19536459 ccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 5040782 - 5040842
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtcc 389  Q
    |||||| ||||||||||||||  |||||||| | |||||||||||| ||||||||||||||    
T  5040782 gtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctagtccaaggagtgtcc 5040842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 381
Target Start/End: Original strand, 5367240 - 5367292
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaag 381  Q
    |||||| ||||||||||||||||| |||||| | |||||||||||||||||||    
T  5367240 gtgtcggtgtcggacacgacacatatccgactccgggacacgcctaatccaag 5367292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 294 - 405
Target Start/End: Complemental strand, 18889626 - 18889514
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtccatg 392  Q
    ||||||||||||||||||| | | |||||| |||| |||   |||||||||| ||| ||||||||||||  |||||| ||||| ||||| ||||||  ||    
T  18889626 tcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacaccgacgcatgtccgacacccggacacacctaacccaagtagtgtctctg 18889527  T
Q  393 cttcatagcttgt 405  Q
    |||||||| ||||    
T  18889526 cttcatagtttgt 18889514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 583 - 639
Target Start/End: Complemental strand, 30679532 - 30679476
Alignment:
Q  583 tagcaatggagaaactcatcctttcaagcactataccattttccattaaatatttag 639  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||| ||| ||||||    
T  30679532 tagcaagggagaaactcatcctctcaagcactgtaccattttccataaaaaatttag 30679476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 15972921 - 15972992
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||| |||||||| | ||||||| |||||||| | || ||||| ||||||||||    
T  15972921 gtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatag 15972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 18420469 - 18420362
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||| || ||||| |||||||| ||| |||||  ||||||||| ||||  ||| ||||| |  |||||||||||||| || ||||||  |||    
T  18420469 tcacataattcaatgcaattataagtgtcggtgttgtgtccatgtcggacatgacaagtgttcgacattatgacacgcctaatccgagaagtgtctgtgc 18420370  T
Q  394 ttcatagc 401  Q
    ||||||||    
T  18420369 ttcatagc 18420362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 20473302 - 20473381
Alignment:
Q  249 gacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcg 329  Q
    |||| |||||||||||  |||||||||||||||||||        ||| ||||||||||||||||||||||||||||||||    
T  20473302 gacacagacactgacatgccgacacaactaataattt-aaaaaactcatataattcagtgtaattacaagtgtcgatgtcg 20473381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 533
Target Start/End: Complemental strand, 30728400 - 30728358
Alignment:
Q  491 aaattcaagtatggcaaaagagactcctttcttaaatgagtac 533  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  30728400 aaattcaaggatagcaaaagagactcctttcttaaatgagtac 30728358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 398
Target Start/End: Complemental strand, 42832280 - 42832234
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||    
T  42832280 tgtccgactccgggacacgcctaatccaaggagtgtccttgcttcat 42832234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 33153448 - 33153489
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgt 335  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  33153448 tcacataattcagtgtaattacaagtgtccgtgtcgtgtcgt 33153489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 37411255 - 37411198
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtg 386  Q
    |||||| ||||| ||||||| | ||||||||||||||||||||||| ||| |||||||    
T  37411255 gtgtcgatgtcgaacacgacgcgtgtccgacactgggacacgcctagtccgaggagtg 37411198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 19536397 - 19536361
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||| |||||||||||||||||||||    
T  19536397 ggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 23058477 - 23058437
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcg 334  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  23058477 tcacataatccagtgtaattacaagtgtcggtgtcgtgtcg 23058437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 341 - 400
Target Start/End: Complemental strand, 15907910 - 15907851
Alignment:
Q  341 gacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||| |||||||| |||||||||| ||||  | |||||||| ||||||||||    
T  15907910 gacacgacacatatccgacaccgggacacgcccaatctgatgagtgtccgtgcttcatag 15907851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 399
Target Start/End: Complemental strand, 18255980 - 18255945
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||||||||||||||||||||||| |||||||||    
T  18255980 ggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 329
Target Start/End: Original strand, 18421987 - 18422022
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcg 329  Q
    |||||||||||||||||||||||||||||| |||||    
T  18421987 tcacataattcagtgtaattacaagtgtcggtgtcg 18422022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 404
Target Start/End: Original strand, 19980719 - 19980798
Alignment:
Q  325 tgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagcttg 404  Q
    |||||||||  || |||| | |||||||||||||||  | ||||| |||||||| || ||||| ||||||||||||||||    
T  19980719 tgtcgtgtctgtgccggatatgacacatgtccgacatcgagacacacctaatccgagaagtgttcatgcttcatagcttg 19980798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 29176493 - 29176446
Alignment:
Q  340 ggacacgacacatgtccgacactgggacacgcctaatccaaggagtgt 387  Q
    ||||||| |||||||||||||||| ||||| ||||||||||| |||||    
T  29176493 ggacacggcacatgtccgacactgagacacacctaatccaagaagtgt 29176446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 974771 - 974809
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgt 332  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  974771 tcacattattcagtgtaattacaagtgtcggtgtcgtgt 974809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 399
Target Start/End: Complemental strand, 3444869 - 3444827
Alignment:
Q  357 gacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||||||||| ||||||||| |||||||||| |||||||||    
T  3444869 gacactgggacatgcctaatccgaggagtgtccgtgcttcata 3444827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 397
Target Start/End: Original strand, 17776612 - 17776714
Alignment:
Q  295 cacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgct 394  Q
    ||||||| |||||||||||| | |||||  ||||  |||| ||| |||||||||   ||||||||   |||||| ||||||||| |||||||||| ||||    
T  17776612 cacataagtcagtgtaattatatgtgtcagtgtcaagtcggtgttggacacgacgtgtgtccgacctcgggacaggcctaatccgaggagtgtccgtgct 17776711  T
Q  395 tca 397  Q
    |||    
T  17776712 tca 17776714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 298 - 400
Target Start/End: Complemental strand, 24975356 - 24975255
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    |||||||||||||| || | | |||| |||||||||  |||| ||||| |||  |||||||||||||||||   ||||||  |||||||||| |||||||    
T  24975356 ataattcagtgtaaatatatgcgtcggtgtcgtgtccgtgtcagacac-acatgtgtccgacactgggacaaatctaatctgaggagtgtccgtgcttca 24975258  T
Q  398 tag 400  Q
    |||    
T  24975257 tag 24975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 323
Target Start/End: Complemental strand, 2438754 - 2438725
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcg 323  Q
    ||||||||||||||||||||||||||||||    
T  2438754 tcacataattcagtgtaattacaagtgtcg 2438725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 27460111 - 27460148
Alignment:
Q  358 acactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  27460111 acaccgggacacgtctaatccaaggagtgtccatgctt 27460148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 323
Target Start/End: Complemental strand, 30404885 - 30404856
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcg 323  Q
    ||||||||||||||||||||||||||||||    
T  30404885 tcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 34337201 - 34337152
Alignment:
Q  309 taattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccga 358  Q
    ||||||||||||||| |||| ||||| |||||||||| |||| |||||||    
T  34337201 taattacaagtgtcggtgtcctgtcggtgtcggacacaacacgtgtccga 34337152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 3414986 - 3414926
Alignment:
Q  342 acacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    ||||||||| | | |||||| ||||||||||||||| ||  ||||| ||||||||||||||    
T  3414986 acacgacacgtatacgacaccgggacacgcctaatctaataagtgttcatgcttcatagct 3414926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 18631399 - 18631351
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||| |||||||||||||||||||| | ||||||||||  |||||||||    
T  18631399 tgtcagacactgggacacgcctaatgcgaggagtgtccgagcttcatag 18631351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 21624294 - 21624326
Alignment:
Q  297 cataattcagtgtaattacaagtgtcgatgtcg 329  Q
    ||||||||||||||||||||||||||| |||||    
T  21624294 cataattcagtgtaattacaagtgtcggtgtcg 21624326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 30404853 - 30404813
Alignment:
Q  337 gtcggacacgacacatgtccgacactgggacacgcctaatc 377  Q
    |||||||||||||||||||||||||  ||||| ||||||||    
T  30404853 gtcggacacgacacatgtccgacaccaggacatgcctaatc 30404813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 44635522 - 44635573
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacac 350  Q
    |||| |||||||||||||||||||||||||     |||||| |||||||||||||||    
T  44635522 tcacgtaattcagtgtaattacaagtgtcg-----gtgtcggtgtcggacacgacac 44635573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 9e-38; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 255 - 405
Target Start/End: Complemental strand, 8365592 - 8365443
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgt 354  Q
    ||||||||||  ||||||||||||||||||||       ||||||||||| |||||||||||||||||| |||||||||| | ||||||||||||| |||    
T  8365592 gacactgacacgccgacacaactaataatttgaaaata-tcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgt 8365494  T
Q  355 ccgacactgggacacgcctaatccaaggagtgtccatgcttcatagcttgt 405  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| ||||    
T  8365493 ccgacactgggacacgcctaatccgaggagtctccgtgcttcataggttgt 8365443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 249 - 401
Target Start/End: Original strand, 16766677 - 16766828
Alignment:
Q  249 gacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgac 348  Q
    ||||| ||||||||||  |||||||| |||||||||||       |||||||||||||||||||||||||||||| |||||||||| |||||||||| ||    
T  16766677 gacatggacactgacacgccgacacagctaataatttgaaaaaa-tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaac 16766775  T
Q  349 acatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    || |||||||||| |||||||||||||||| | || ||||| |||||||||||    
T  16766776 acgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatagc 16766828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 294 - 399
Target Start/End: Original strand, 31384944 - 31385048
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||||||||  |||||||| || || ||||||||||| ||||| |||| ||||||||||||||||||||||||||| |||    
T  31384944 tcacataattcagtgtaattacaagtgtcagtgtcgtgtagt-gttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgc 31385042  T
Q  394 ttcata 399  Q
    ||||||    
T  31385043 ttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 10339161 - 10339054
Alignment:
Q  294 tcacataattcagtgt-aattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatg 392  Q
    |||||||||||||||| ||||| | |||||  || ||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||    
T  10339161 tcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtg 10339062  T
Q  393 cttcatag 400  Q
    ||||||||    
T  10339061 cttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 294 - 405
Target Start/End: Original strand, 18367860 - 18367971
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| ||| ||||||||||| | |||||| |||||||||| |||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||    
T  18367860 tcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgc 18367959  T
Q  394 ttcatagcttgt 405  Q
    ||||||| ||||    
T  18367960 ttcataggttgt 18367971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 5970143 - 5970037
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||| ||| | |||||||||| ||||||||||||||||| |||||||  |||||||||| ||||| ||||||| | ||||    
T  5970143 tcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgactatgc 5970044  T
Q  394 ttcatag 400  Q
    |||||||    
T  5970043 ttcatag 5970037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 8714004 - 8714110
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||| ||| | |||||||||| ||||||||||||||||| |||||||  |||||||||| ||||| |||||||||  |||    
T  8714004 tcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgtctttgc 8714103  T
Q  394 ttcatag 400  Q
    |||||||    
T  8714104 ttcatag 8714110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 9107405 - 9107299
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| |||||||||||||||||||||||| |||||||||| |||||||||| ||   |||||||||| ||||||| |||||||| ||||||| || |||    
T  9107405 tcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgc 9107306  T
Q  394 ttcatag 400  Q
    |||||||    
T  9107305 ttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 9522915 - 9523021
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||||||||| ||| |||||| |||||||  |||||| |||||||||| | ||||||||||||||||  ||  |||||||    
T  9522915 tcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaatccaaatagcatccatgc 9523014  T
Q  394 ttcatag 400  Q
    |||||||    
T  9523015 ttcatag 9523021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 329 - 397
Target Start/End: Complemental strand, 32978910 - 32978842
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    |||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  32978910 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 9629407 - 9629513
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcg-tgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatg 392  Q
    |||||||||||| |||||||| | |||||| ||||| |||||| ||||||||| |||  |||||||||||| |||||| ||||||| |||||||||||||    
T  9629407 tcacataattcaatgtaattatatgtgtcggtgtcggtgtcgt-gtcggacacaacatgtgtccgacactgagacacgtctaatccgaggagtgtccatg 9629505  T
Q  393 cttcatag 400  Q
    ||||||||    
T  9629506 cttcatag 9629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 16488625 - 16488519
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| ||| ||||||||||| | |||||| |||||||||| ||||||||||||||| |||| | ||| ||||||||||| ||||||||| ||| | |||    
T  16488625 tcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgc 16488526  T
Q  394 ttcatag 400  Q
    |||||||    
T  16488525 ttcatag 16488519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 4877991 - 4878061
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||||||| ||||||||||    
T  4877991 gtgtcggtgtcggacacgacacatgtccgacac-aggacacgcctaatccgaggagtgtccgtgcttcatag 4878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 296 - 402
Target Start/End: Original strand, 17435225 - 17435331
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    ||||||||||||||||||||||||||   |||  ||||| ||||||||||||||| ||| ||||||||||||||| ||||||  |  ||||||| | |||    
T  17435225 acataattcagtgtaattacaagtgttagtgttttgtcgatgtcggacacgacacgtgttcgacactgggacacgtctaatctgaaaagtgtccgtactt 17435324  T
Q  396 catagct 402  Q
    |||||||    
T  17435325 catagct 17435331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 17327654 - 17327590
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||| |||| ||||| |||||||||||||||| |||||||||| ||||||||||    
T  17327654 tgtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 231 - 399
Target Start/End: Complemental strand, 17841686 - 17841530
Alignment:
Q  231 ctatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgt 330  Q
    ||||||||||| ||||| ||||  ||||||||||  |||||||| |||||||||||       |||||||||| |||||||||||||||| || |||||     
T  17841686 ctatgaagcactgatacggacacggacactgacacgccgacacagctaataatttgaaaaaa-tcacataatttagtgtaattacaagtgacggtgtcg- 17841589  T
Q  331 gtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
              |||||||||  |||||||||||| |||||||||||||| |||||||||| |||||||||    
T  17841588 ----------gacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 26562713 - 26562777
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccga 358  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||||| ||||| |||||||||||    
T  26562713 tcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcgaacacggcacatgtccga 26562777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 232 - 400
Target Start/End: Original strand, 28152062 - 28152217
Alignment:
Q  232 tatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtg 331  Q
    |||||||||||||||  ||||  ||||||||||  |||||| | |||||||||||       |||||||||||||||||||||||||||||| ||||       
T  28152062 tatgaagcacggatatggacacggacactgacacgccgacaaagctaataatttgaaaaa--tcacataattcagtgtaattacaagtgtcggtgtc--- 28152156  T
Q  332 tcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
            ||||||||||| |||||||||| |||||| ||||||||| |||||||| | ||||||||||    
T  28152157 --------ggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 249 - 402
Target Start/End: Complemental strand, 10770753 - 10770605
Alignment:
Q  249 gacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgac 348  Q
    ||||| ||||||||||  || |||||||||||||||||       |||||||||||||||||||||||||||||| |||||      |||| ||||||||    
T  10770753 gacatggacactgacacgccaacacaactaataatttgaaaaaa-tcacataattcagtgtaattacaagtgtcggtgtcg------tgtcagacacgac 10770661  T
Q  349 aca--tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    |||  |||||||  | |||||| ||||||||  |||||||||| ||||||||||||    
T  10770660 acacgtgtccgatgccgggacatgcctaatctgaggagtgtccgtgcttcatagct 10770605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 296 - 398
Target Start/End: Original strand, 12696350 - 12696446
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||||||||||||||||||||||||||  |||||||||      ||||||||||| |||| ||||| ||||||| ||| ||||||||||||||  |||||    
T  12696350 acataattcagtgtaattacaagtgtcagtgtcgtgtc------ggacacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgctt 12696443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 34595182 - 34595253
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||| |||| ||||| ||||||| |||||||| |||||||||| ||||||||||    
T  34595182 gtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 7248382 - 7248488
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||| ||||||| | |||| |  ||||||||| ||| |||||| |||  |||||||||| |||||||| | ||||| |||||||||| |||    
T  7248382 tcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgc 7248481  T
Q  394 ttcatag 400  Q
    |||||||    
T  7248482 ttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 231 - 402
Target Start/End: Original strand, 17302518 - 17302689
Alignment:
Q  231 ctatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgt 330  Q
    ||||||||| | ||||| ||||   |||||||||  | ||||||||||||||||||       |||||||||||| ||||||||||||||||  ||||||    
T  17302518 ctatgaagcgcagatacggacacgaacactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtcattgtcgt 17302617  T
Q  331 gtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    |||  | |  ||||| |||| |||||||||  || |||| |||||||||| || ||||| || |||||||||    
T  17302618 gtcagtattagacacaacacgtgtccgacatcggaacacacctaatccaaagaatgtccgtgtttcatagct 17302689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 400
Target Start/End: Original strand, 3209379 - 3209518
Alignment:
Q  267 ccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcg-tgtcgt-----tgtcggacacgacacatgtccgaca 360  Q
    |||||||| |||||||||||       |||||||||| ||||| ||||||||||||| ||||| ||||||     ||||| |||||||||  ||||||||    
T  3209379 ccgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcggtgtcggtgtcgtgtcagtgtcgaacacgacacgcgtccgaca 3209478  T
Q  361 ctgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |  ||||||||||||||| ||||||||   ||||||||||    
T  3209479 cccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 333
Target Start/End: Complemental strand, 9911563 - 9911524
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtc 333  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  9911563 tcacataattcagtgtaattacaagtgtcggtgtcgtgtc 9911524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 297 - 400
Target Start/End: Original strand, 10294134 - 10294237
Alignment:
Q  297 cataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttc 396  Q
    |||| |||| |||||||| | |||||| |||||||| | ||||||||||||||  ||||||| ||| ||||||  ||||||  |||||||||  ||||||    
T  10294134 catatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaatctgaggagtgtctgtgcttc 10294233  T
Q  397 atag 400  Q
    ||||    
T  10294234 atag 10294237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 28715343 - 28715414
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||| ||| |||||| |||||||||||||| | || ||||| | ||||||||||    
T  28715343 gtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcatag 28715414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 34446647 - 34446690
Alignment:
Q  357 gacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||    
T  34446647 gacactgggacacacctaatccaaggagtgtccgtgcttcatag 34446690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 402
Target Start/End: Complemental strand, 5732510 - 5732472
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  5732510 ggacacgcctaatccgaggagtgtccatgcttcatagct 5732472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 403
Target Start/End: Complemental strand, 7977841 - 7977767
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagctt 403  Q
    |||||| |||||||||| ||| ||||||||||  |  |||||||||||| ||||||||| | |||||||||||||    
T  7977841 gtgtcggtgtcggacacaacatatgtccgacaacgaaacacgcctaatctaaggagtgttcgtgcttcatagctt 7977767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 388
Target Start/End: Complemental strand, 21044872 - 21044826
Alignment:
Q  342 acacgacacatgtccgacactgggacacgcctaatccaaggagtgtc 388  Q
    ||||||||  |||||||||||||||||||||||||| ||||||||||    
T  21044872 acacgacatgtgtccgacactgggacacgcctaatctaaggagtgtc 21044826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 400
Target Start/End: Complemental strand, 13360362 - 13360313
Alignment:
Q  351 atgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||| |||||||||||||| | |||||||| ||||||||||    
T  13360362 atgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcatag 13360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 21395341 - 21395292
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacac 345  Q
    |||||||| ||||||||||||||||||| |||||||||  ||||||||||    
T  21395341 acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 404
Target Start/End: Original strand, 9027238 - 9027290
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagcttg 404  Q
    |||||||||| |||||||| ||||||||||||||||   ||||||||||||||    
T  9027238 tgtccgacaccgggacacggctaatccaaggagtgtttgtgcttcatagcttg 9027290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 400
Target Start/End: Original strand, 10649371 - 10649407
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||||||||||||||| ||||||||||    
T  10649371 ggacacgcctaatccaaggagtgtccgtgcttcatag 10649407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 388
Target Start/End: Complemental strand, 21068120 - 21068084
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtc 388  Q
    |||||||||||||||||||||||||| ||||||||||    
T  21068120 tgtccgacactgggacacgcctaatctaaggagtgtc 21068084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 9658939 - 9658998
Alignment:
Q  341 gacacgacacatgtccgacactgggacacgcctaa-tccaaggagtgtccatgcttcata 399  Q
    |||||||||| |||| ||||| || |||||||||| |||||||||||||| |||||||||    
T  9658939 gacacgacacgtgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcata 9658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 400
Target Start/End: Complemental strand, 34073379 - 34073278
Alignment:
Q  297 cataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttc 396  Q
    |||||||||||||||||| | | |||| |||||||||| ||||  ||||||||  || ||||||| |||||||  ||||| | |||||||||| ||||||    
T  34073379 cataattcagtgtaattatatgggtcggtgtcgtgtcggtgtc-tacacgacatgtg-ccgacaccgggacacctctaattcgaggagtgtccgtgcttc 34073282  T
Q  397 atag 400  Q
    ||||    
T  34073281 atag 34073278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 352 - 402
Target Start/End: Original strand, 7938171 - 7938221
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    |||||||||| | ||||||||| |||| |||||||||| ||||||||||||    
T  7938171 tgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttcatagct 7938221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 370
Target Start/End: Complemental strand, 8931635 - 8931561
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacg 370  Q
    |||||||||||| |||||| | ||||||||||||||||| |||| ||  |||||||| ||| |||| | ||||||    
T  8931635 acataattcagtataattatatgtgtcgatgtcgtgtcggtgtcagatgcgacacatatccaacacggagacacg 8931561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 327
Target Start/End: Complemental strand, 1191735 - 1191702
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgt 327  Q
    ||||| ||||||||||||||||||||||||||||    
T  1191735 tcacaaaattcagtgtaattacaagtgtcgatgt 1191702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 398
Target Start/End: Complemental strand, 5000630 - 5000557
Alignment:
Q  325 tgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||| ||||| |||| |||||||||||| ||||||||  ||||||| ||||||| | |||||| | ||||||||    
T  5000630 tgtcatgtcggtgtcagacacgacacatatccgacaccaggacacgtctaatccgaagagtgttcgtgcttcat 5000557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 398
Target Start/End: Complemental strand, 7265604 - 7265535
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||| |||||||||| | ||||||||||||| || | | ||||||||| ||||| |||| ||||||||    
T  7265604 gtgtcggtgtcggacacaatacatgtccgacaccggaatatgcctaatccgaggagcgtccgtgcttcat 7265535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 329
Target Start/End: Complemental strand, 7977863 - 7977830
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcg 329  Q
    |||||||||||||||||||||||||||| |||||    
T  7977863 acataattcagtgtaattacaagtgtcggtgtcg 7977830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Complemental strand, 9025493 - 9025448
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    |||||||||| |||||||||||||||| || ||||||| |||||||    
T  9025493 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 12627588 - 12627539
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatcc 378  Q
    |||||| |||||||||| ||||||||||||||| | ||||| ||||||||    
T  12627588 gtgtcgatgtcggacaccacacatgtccgacaccgagacactcctaatcc 12627539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 12868691 - 12868609
Alignment:
Q  329 gtgtcgttgtcggacacgaca----catgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagcttgtag 407  Q
    |||||| ||||||||||||||    |||||||||||| || ||||||||||||| |  ||||||  |||||||||| ||||||    
T  12868691 gtgtcggtgtcggacacgacatgcacatgtccgacacgggaacacgcctaatccgataagtgtcggtgcttcataggttgtag 12868609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 361
Target Start/End: Complemental strand, 25038104 - 25038039
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacac 361  Q
    |||||||| ||||||||||||| ||||| | | |||| | |||| |||||||||| ||||||||||    
T  25038104 acataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgacacgtgtccgacac 25038039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 7625187 - 7625235
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| || |||||| ||||||||||||||| | ||||||||||    
T  7625187 tgtccgacaccggaacacgcttaatccaaggagtgttcgtgcttcatag 7625235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 366 - 402
Target Start/End: Complemental strand, 7723233 - 7723197
Alignment:
Q  366 acacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  7723233 acacgcctaatccgaggagtgtccgtgcttcatagct 7723197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 7996377 - 7996325
Alignment:
Q  345 cgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    |||||| ||||  |||| ||||||||||||||||||||||| ||| |||||||    
T  7996377 cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 7996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 345 - 397
Target Start/End: Original strand, 8022424 - 8022476
Alignment:
Q  345 cgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    |||||| ||||  |||| ||||||||||||||||||||||| ||| |||||||    
T  8022424 cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 8022476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 9911518 - 9911482
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  9911518 ggacacgcctaatccgaggagtgttcatgcttcatag 9911482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 34290072 - 34290024
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| | |||||| ||||| ||| |||||||||||||||||||    
T  34290072 tgtccgacaccgagacacgtctaattcaaagagtgtccatgcttcatag 34290024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 47989521 - 47989627
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||  |||||||||||||||| |||||||||| |||    
T  47989521 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgc 47989620  T
Q  394 ttcatag 400  Q
    |||||||    
T  47989621 ttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 5944307 - 5944413
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||| |||||||| |||||||||| || ||||||| ||||||||||||||| |||| ||||||||||| |||||||| | |||    
T  5944307 tcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgc 5944406  T
Q  394 ttcatag 400  Q
    |||||||    
T  5944407 ttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 296 - 388
Target Start/End: Complemental strand, 6612204 - 6612112
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtc 388  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||| |  ||||||||||  |||||||||||||||||||||||||    
T  6612204 acataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 32461498 - 32461392
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||| | ||||||||||||||| | ||| |||||| ||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||    
T  32461498 tcacataatttaatgtaattacaagtgttggtgt-gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgc 32461400  T
Q  394 ttcatagc 401  Q
    ||||||||    
T  32461399 ttcatagc 32461392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 31694745 - 31694639
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||||| |||||| | |||||| || ||||||||||||  |||||||||| |||    
T  31694745 tcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgc 31694646  T
Q  394 ttcatag 400  Q
    |||||||    
T  31694645 ttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 40917779 - 40917879
Alignment:
Q  300 aattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||| ||||||||||||||| ||| |||||||||| ||| ||||||||||| |||||||||| |||||||||||||||| |||| ||||| |||||||||    
T  40917779 aattaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcata 40917878  T
Q  400 g 400  Q
    |    
T  40917879 g 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 232 - 400
Target Start/End: Original strand, 6427425 - 6427594
Alignment:
Q  232 tatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnn--tcacataattcagtgtaattacaagtgtcgatgtcg 329  Q
    ||||||||| |||||| ||||  ||||||||||  ||||||||||||||||||||         |||||||||||| ||||| ||||||||||  |||||    
T  6427425 tatgaagcatggatacggacac-gacactgacatgccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtcagtgtcg 6427523  T
Q  330 tgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||| |  |||||||||||||| |||||||||| |||||||||||||||  | |||||||| ||||||||||    
T  6427524 tgtaggcgtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 9828068 - 9828174
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||  | |||||| |||||||||  |||| |||||||||| |||||||||| |||||||| ||||||| |||||||||| |||    
T  9828068 tcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgc 9828167  T
Q  394 ttcatag 400  Q
    |||||||    
T  9828168 ttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 236 - 400
Target Start/End: Complemental strand, 18556548 - 18556385
Alignment:
Q  236 aagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgt 335  Q
    |||||||||||| ||||  ||||||||||  |||||||| |||||||||||       |||||||||| | ||||||||||||| | | ||||||| ||     
T  18556548 aagcacggatacggacacggacactgacacgccgacacagctaataatttgaaaata-tcacataatttaatgtaattacaagtattggtgtcgtgacgg 18556450  T
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||| ||| |||||| | ||||||||||||||||||||||||| || ||||||| ||||||||||    
T  18556449 tgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 298 - 395
Target Start/End: Complemental strand, 9629931 - 9629834
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||||||||||| |||| |||||||| |||||||||| |||||||||||||||||||||||||| |||||||| ||  |||||| ||||||| |||||    
T  9629931 ataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 9629834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 25934640 - 25934746
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| ||| ||||||||||| | |||||| | |||||||| ||||||||||||||| |||| ||||| |||| |||||| ||||||||||||||| |||    
T  25934640 tcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgc 25934739  T
Q  394 ttcatag 400  Q
    |||||||    
T  25934740 ttcatag 25934746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 1486744 - 1486646
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||| |||||||| ||||||||||      |||||||||| |||||||||| |||||||||||||||| |||||||||  |||    
T  1486744 tcacataattcagtgtaattataagtgtcggtgtcgtgtcg------gacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgc 1486651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 296 - 400
Target Start/End: Complemental strand, 30173795 - 30173691
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||||| ||||||||||||||||||||| |||||||||  | |||||||||||||||||||||| || |||||||||||| || | || | ||| |||||    
T  30173795 acataactcagtgtaattacaagtgtcggtgtcgtgtccgtatcggacacgacacatgtccgactctaggacacgcctaacccgacgaatatccgtgctt 30173696  T
Q  396 catag 400  Q
    |||||    
T  30173695 catag 30173691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 37598879 - 37598950
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  37598879 gtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 22515898 - 22515827
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||||    
T  22515898 gtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 329 - 399
Target Start/End: Complemental strand, 40258944 - 40258874
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||| |||| |||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  40258944 gtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 18337377 - 18337450
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    |||||| |||||||||| |||| ||||||||||||||||| |||| |||| |||||||||| ||||||||||||    
T  18337377 gtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatagct 18337450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 25361910 - 25362013
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||| | |||||  |||||||||| |||||||||||  ||||||||||||| || |||  |||||||| | |||||||| |||    
T  25361910 tcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacg--acatgtccgacaccggaaca--cctaatccgaagagtgtccgtgc 25362005  T
Q  394 ttcatagc 401  Q
    ||||||||    
T  25362006 ttcatagc 25362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 309 - 399
Target Start/End: Original strand, 21032245 - 21032335
Alignment:
Q  309 taattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    ||||||||| ||||| |||||||| | ||||||||||||||  |||||||||  | || |||||||||||||||||||||  |||||||||    
T  21032245 taattacaaatgtcggtgtcgtgtgggtgtcggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgtctgtgcttcata 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 304 - 398
Target Start/End: Original strand, 17778580 - 17778670
Alignment:
Q  304 cagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||||||||||||||||| |||||||||| |||||    |||||| |||||||||| |||||| ||||||||| || ||||| | ||||||||    
T  17778580 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 44482254 - 44482311
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacaca 351  Q
    ||||||||||||||||||||| | |||||| |||||||||| ||||||||||||||||    
T  44482254 tcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacaca 44482311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 1704983 - 1704935
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  1704983 tgtccgacaccgagacacgcctaatccaaggagtgtccatgcttcatag 1704935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 400
Target Start/End: Complemental strand, 46348479 - 46348323
Alignment:
Q  232 tatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtg 331  Q
    |||||||||||||||| ||||  ||||||||||  |||||||| |||||||||||       ||| |||||| ||||||||||||||||||| |||||      
T  46348479 tatgaagcacggatacggacacggacactgacacgccgacacagctaataatttgaaaaaa-tcatataatttagtgtaattacaagtgtcggtgtcg-- 46348383  T
Q  332 tcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
             |||||||||| |||||||||| | ||||||||| |||| ||| |||||| ||||||||||    
T  46348382 ---------gacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 1815305 - 1815376
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| |||| ||||||||||||||||||||| |||||||||||||||  ||||||| || || |||||||    
T  1815305 gtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcatag 1815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 51410073 - 51410144
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||| | |||||||| | ||||||||||||||||||||| | | ||||||||||    
T  51410073 gtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcatag 51410144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 5376533 - 5376483
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacg 346  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||||||||    
T  5376533 acataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacacg 5376483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 6574051 - 6574096
Alignment:
Q  355 ccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||||||||||||||||||||| || ||||||||||    
T  6574051 ccgacactgggacacgcctaatccaaggagtgaccgtgcttcatag 6574096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 17831566 - 17831462
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtccatg 392  Q
    |||||| |||||||||||| | | ||||||   |||||||  |||||||||| ||||  |||||||||| |||||||||||||||  |||||||||||||    
T  17831566 tcacattattcagtgtaatcatatgtgtcg---tcgtgtcagtgtcggacaccgacatgtgtccgacaccgggacacgcctaatcttaggagtgtccatg 17831470  T
Q  393 cttcatag 400  Q
     |||||||    
T  17831469 tttcatag 17831462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 27965983 - 27965938
Alignment:
Q  357 gacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||    
T  27965983 gacaccgggacacgcctaatccgaggagtgtccatgcttcatagct 27965938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 329 - 398
Target Start/End: Complemental strand, 42359460 - 42359391
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||| ||||||||| |||   |||||||||| |||||||||||||||| |||||||||| ||||||||    
T  42359460 gtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 10577736 - 10577676
Alignment:
Q  339 cggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||||||| | |||| ||||| ||||||||||| ||||||||||||||| |||||||||    
T  10577736 cggacacgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 371
Target Start/End: Complemental strand, 27471600 - 27471524
Alignment:
Q  295 cacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgc 371  Q
    |||||||||||||||||||||| |||| | |||| | ||| ||| ||| ||||||| |||||||||| |||||||||    
T  27471600 cacataattcagtgtaattacatgtgttggtgtcatatcggtgttggatacgacacgtgtccgacaccgggacacgc 27471524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 28273119 - 28273067
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacac 350  Q
    |||||||||||||||||||||||||| |||| | ||| |||||||||||||||    
T  28273119 ataattcagtgtaattacaagtgtcggtgtcctatcgatgtcggacacgacac 28273067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 36878541 - 36878589
Alignment:
Q  356 cgacactgggacacgcctaatccaaggagtgtccatgcttcatagcttg 404  Q
    |||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  36878541 cgacacggggacacgcctaatcccaggagtgtccgtgcttcatagcttg 36878589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 333
Target Start/End: Complemental strand, 24577221 - 24577182
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtc 333  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  24577221 tcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 38078672 - 38078601
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||||||| | ||||  ||||||||||||||| |||||| | | ||||||||||    
T  38078672 gtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcatag 38078601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 39130778 - 39130711
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttc 396  Q
    |||||| |||||||||| |||| ||  ||||| |||||||||| |||||||| |||||||||||||||    
T  39130778 gtgtcggtgtcggacacaacacgtgctcgacattgggacacgcttaatccaaagagtgtccatgcttc 39130711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 400
Target Start/End: Complemental strand, 2896131 - 2896061
Alignment:
Q  330 tgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||| |||| |||||||||  ||||||| || ||||||| ||||||||||| |||||||||| |||||||    
T  2896131 tgtcggtgtcagacacgacatgtgtccgagaccgggacacacctaatccaagaagtgtccatgtttcatag 2896061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 15449267 - 15449166
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||| ||||||||||||||||||  |||||| ||| |||||||||||          ||||| | |||| |||||||||||||||||||  |||    
T  15449267 tcacataatttagtgtaattacaagtgtctgtgtcgtatcggtgtcggacacg---------tgacaccgagacatgcctaatccaaggagtgtctgtgc 15449177  T
Q  394 ttcatagcttg 404  Q
    |||||||||||    
T  15449176 ttcatagcttg 15449166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 16297285 - 16297223
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||||||||||   ||||||||||  ||||||||||||||| |||||||||| ||||||||    
T  16297285 tgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 34371737 - 34371799
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtcc 356  Q
    ||||||||||||||||||||| | |||||| |||||||| | ||||||| ||||||| |||||    
T  34371737 tcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgtcc 34371799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 400
Target Start/End: Complemental strand, 34712377 - 34712323
Alignment:
Q  346 gacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||| ||||| ||||||||||||| ||||| |||||||||||| ||||||||||    
T  34712377 gacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcatag 34712323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 36906021 - 36906126
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||| ||||||| | |||| |  || |||||  ||||||||||||| |  ||| ||||||||||||| |||||| ||| |||||||| |||    
T  36906021 tcacataattcagagtaattatatgtgttggcgttgtgtcagtgtcggacacgacccgcgtctgacactgggacacacctaatgcaa-gagtgtccgtgc 36906119  T
Q  394 ttcatag 400  Q
    |||||||    
T  36906120 ttcatag 36906126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 113323 - 113364
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgt 335  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  113323 tcacataattcagtgtaattacaagtgtaggtgtcgtgtcgt 113364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 21530737 - 21530778
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacg 370  Q
    |||||| ||||||||||||||||||||||||||| |||||||    
T  21530737 gtgtcggtgtcggacacgacacatgtccgacactaggacacg 21530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 401
Target Start/End: Complemental strand, 41597474 - 41597409
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    ||||||||||||||| |||| ||||| |||| |||| | ||||||||||||||  |||||||||||    
T  41597474 tgtcggacacgacacgtgtctgacacggggatacgctttatccaaggagtgtctgtgcttcatagc 41597409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 113364 - 113412
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||| |||| |||||||||||||||| ||||||| |||||||||||||    
T  113364 tgtccaacaccgggacacgcctaatccgaggagtgcccatgcttcatag 113412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 1705065 - 1704988
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtc 333  Q
    ||||| |||| ||||||||| |||||||||||       ||||||||||||| |||||||||||||||| |||||||||    
T  1705065 gacaccgacacaccgacacatctaataatttgaaaaaa-tcacataattcagggtaattacaagtgtcggtgtcgtgtc 1704988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 2218299 - 2218347
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||| ||||||||||||||  |||||||||| ||||||||||    
T  2218299 tgtccgacactaggacacgcctaatctgaggagtgtccgtgcttcatag 2218347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 15765829 - 15765877
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||| |||||||||||||||||||||| | |||||||| ||||||||||    
T  15765829 tgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcatag 15765877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 328
Target Start/End: Complemental strand, 18190141 - 18190109
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtc 328  Q
    |||||||||||||||||||||||||||||||||    
T  18190141 acataattcagtgtaattacaagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 31015092 - 31015140
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggag 384  Q
    ||||||||||||||| |||| ||||  ||||||||||||||||||||||    
T  31015092 tgtcggacacgacacgtgtctgacatcgggacacgcctaatccaaggag 31015140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 389
Target Start/End: Original strand, 38503352 - 38503437
Alignment:
Q  302 ttcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtcc 389  Q
    ||||||||||||| | |||||| |||| |||||  |||||||| |||||||||| ||| | ||||||| |||||||| ||| ||||||    
T  38503352 ttcagtgtaattatatgtgtcggtgtcctgtcg--gtcggacatgacacatgtctgacgcagggacacacctaatccgaggtgtgtcc 38503437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 399
Target Start/End: Complemental strand, 48415702 - 48415667
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||||||||||||||||||||||| |||||||||    
T  48415702 ggacacgcctaatccaaggagtgtccgtgcttcata 48415667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 2218264 - 2218302
Alignment:
Q  295 cacataattcagtgtaattacaagtgtcgatgtcgtgtc 333  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  2218264 cacataatttagtgtaattacaagtgtcggtgtcgtgtc 2218302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 6332694 - 6332732
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgt 332  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  6332694 tcacataattcagtgtaattacaagtatcggtgtcgtgt 6332732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 354 - 400
Target Start/End: Complemental strand, 21366038 - 21365992
Alignment:
Q  354 tccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||| | |||||||||||||| |||||||||| ||||||||||    
T  21366038 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 21365992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 362 - 400
Target Start/End: Complemental strand, 35702580 - 35702542
Alignment:
Q  362 tgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  35702580 tgggacacgcctaatccgaggagtgtccgtgcttcatag 35702542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 386
Target Start/End: Original strand, 40181926 - 40181976
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtg 386  Q
    |||||||||| |||| ||||| |||| |||||||||||||||| |||||||    
T  40181926 tgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 352 - 402
Target Start/End: Complemental strand, 48040462 - 48040412
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    |||||||||||||||||||||||||   |||||||||| |||||| |||||    
T  48040462 tgtccgacactgggacacgcctaattggaggagtgtccgtgcttcgtagct 48040412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 399
Target Start/End: Complemental strand, 6415036 - 6414932
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||| |||| |||||| | |||||| |||| | ||| ||||||||||||||| |||| ||||| | |||||   | |||| |||||||||| |||    
T  6415036 tcacataatacagtttaattagatgtgtcggtgtcat-tcgatgtcggacacgacacgtgtctgacaccgcgacacatttcatccgaggagtgtccgtgc 6414938  T
Q  394 ttcata 399  Q
    ||||||    
T  6414937 ttcata 6414932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 387
Target Start/End: Complemental strand, 16164350 - 16164257
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgt 387  Q
    |||||||||| | |||||||| | |||||  |||||||| | ||| |||| | |||| ||||||||||  ||||||||||||||| | ||||||    
T  16164350 tcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgtccgacaccaggacacgcctaatccgaagagtgt 16164257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 329
Target Start/End: Complemental strand, 19058889 - 19058856
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcg 329  Q
    |||||||||||||||||||||||||||| |||||    
T  19058889 acataattcagtgtaattacaagtgtcggtgtcg 19058856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 323
Target Start/End: Original strand, 31015067 - 31015096
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcg 323  Q
    ||||||||||||||||||||||||||||||    
T  31015067 tcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 34741901 - 34741965
Alignment:
Q  336 tgtcggacacgaca-catgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||| ||||||||| | |||||||||| |||||||||||||||| | |||||||| ||||||||||    
T  34741901 tgtctgacacgacaacgtgtccgacac-gggacacgcctaatccgaagagtgtccgtgcttcatag 34741965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 323
Target Start/End: Complemental strand, 40258968 - 40258939
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcg 323  Q
    ||||||||||||||||||||||||||||||    
T  40258968 tcacataattcagtgtaattacaagtgtcg 40258939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 43492505 - 43492456
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatcc 378  Q
    |||||| |||| ||||| ||||||||||||||| || |||||||||||||    
T  43492505 gtgtcggtgtcagacacaacacatgtccgacaccggcacacgcctaatcc 43492456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 351073 - 351029
Alignment:
Q  345 cgacacatgtccgacactgggacacgcctaatccaaggagtgtcc 389  Q
    |||| ||||| | |||| |||||||||||||||||||||||||||    
T  351073 cgacgcatgttcaacaccgggacacgcctaatccaaggagtgtcc 351029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 13011288 - 13011223
Alignment:
Q  256 acactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgt 321  Q
    |||||||||  |||||||| |||||||||||       |||||||||| |||||||||||||||||    
T  13011288 acactgacatgccgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 19637816 - 19637872
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagt 385  Q
    |||||| |||||||||||| |||| |||||||| ||||| | |||||||| ||||||    
T  19637816 gtgtcggtgtcggacacgatacatatccgacaccgggacgcccctaatccgaggagt 19637872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 400
Target Start/End: Original strand, 22947813 - 22947849
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  22947813 ggacacgcctaatccgaggagtgtccgtgcttcatag 22947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 24334737 - 24334705
Alignment:
Q  297 cataattcagtgtaattacaagtgtcgatgtcg 329  Q
    ||||||||||||||||||||||||||| |||||    
T  24334737 cataattcagtgtaattacaagtgtcggtgtcg 24334705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 29144368 - 29144320
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| || ||||||||||||| | |||||||| ||||||||||    
T  29144368 tgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcatag 29144320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 35919311 - 35919271
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcg 334  Q
    ||||||||||||||||||||| |||||||  ||||||||||    
T  35919311 tcacataattcagtgtaattataagtgtccgtgtcgtgtcg 35919271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 46940796 - 46940748
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| || ||||||||||||| |||||||| | ||||||||||    
T  46940796 tgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatag 46940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 298 - 386
Target Start/End: Complemental strand, 48148068 - 48147980
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtg 386  Q
    ||||||||||||||||| |  ||||| |||||||| | | ||| |||||||  ||||  ||||| ||||||||||||||| || |||||    
T  48148068 ataattcagtgtaattatatatgtcggtgtcgtgttgatatcgaacacgacgtatgtatgacaccgggacacgcctaatctaaagagtg 48147980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 8e-35; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 294 - 405
Target Start/End: Original strand, 24339666 - 24339777
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| | |||||||| |||||||||||||||| ||||||| || |||    
T  24339666 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgc 24339765  T
Q  394 ttcatagcttgt 405  Q
    ||||||| ||||    
T  24339766 ttcatagattgt 24339777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 2334274 - 2334379
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||  ||||| ||||||| |||||||||| ||     
T  2334274 tcacataatttagtgtaattacaagtgtcggtgtcgtgtcgt-gtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgt 2334372  T
Q  394 ttcatag 400  Q
    |||||||    
T  2334373 ttcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 7438730 - 7438836
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||| ||||||||||||||||| |||| ||||| ||||  ||||||||||||| ||||||| ||||||||||||| |||||||||||| |||    
T  7438730 tcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgc 7438829  T
Q  394 ttcatag 400  Q
    |||||||    
T  7438830 ttcatag 7438836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 5409871 - 5409771
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||| |||||||||||||| ||||||||||      |||||||||| |||||||||| |||||||||||||||| |||||||||| |||    
T  5409871 tcacataattcagtgcaattacaagtgtcggtgtcgtgtcg------gacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 5409778  T
Q  394 ttcatag 400  Q
    |||||||    
T  5409777 ttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 9778524 - 9778624
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||| ||||||||||||||| ||||||||||      ||||| |||| |||||||||| ||||||||||||||||||||||||||| |||    
T  9778524 tcacataattcagtataattacaagtgtcggtgtcgtgtcg------gacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgc 9778617  T
Q  394 ttcatag 400  Q
    |||||||    
T  9778618 ttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 231 - 399
Target Start/End: Original strand, 32308082 - 32308249
Alignment:
Q  231 ctatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgt 330  Q
    |||||||||||  ||||  |||| ||||||||||  |||||||  |||||||||||       ||||||||||||||||||||  | |||||  ||||||    
T  32308082 ctatgaagcacaaatacgaacatggacactgacacgccgacaccgctaataatttgagaaaa-tcacataattcagtgtaattgtatgtgtcagtgtcgt 32308180  T
Q  331 gtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||| ||| |||||||||||||||||||||| | |||||  ||||||| |||||||| |||||||||||    
T  32308181 gtcggtgttggacacgacacatgtccgacaccgagacacagctaatccgaggagtgttcatgcttcata 32308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 25822685 - 25822785
Alignment:
Q  300 aattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||||||||||||||||||||| |||||| ||| | ||||||||||||| |||| ||||  |||||| |||||||| ||||||||||| || ||||||    
T  25822685 aattcagtgtaattacaagtgtcggtgtcgtatcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcata 25822784  T
Q  400 g 400  Q
    |    
T  25822785 g 25822785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 26033496 - 26033392
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||||||||| | |||||||| |||| |||| ||||| ||||||| || | ||||| |||||||| |||||||||| ||     
T  26033496 tcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgt 26033397  T
Q  394 ttcat 398  Q
    |||||    
T  26033396 ttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 299 - 397
Target Start/End: Original strand, 7058455 - 7058551
Alignment:
Q  299 taattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    ||||||||||||||||||||||| | |||||||||| |  ||||||| |||||||||||||| ||  ||||||||||||||||||||||| ||| ||||    
T  7058455 taattcagtgtaattacaagtgttggtgtcgtgtcgat--cggacacaacacatgtccgacattgacacacgcctaatccaaggagtgtctatggttca 7058551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 270 - 400
Target Start/End: Complemental strand, 32094079 - 32093954
Alignment:
Q  270 acacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactggg-aca 368  Q
    |||||||||||||||||       |||||||||||||||||||||||| ||||| ||||||||||      |||||||||| |||||||||| ||| |||    
T  32094079 acacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtcg------gacacgacacgtgtccgacaccggggaca 32093986  T
Q  369 cgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| |||||||| | ||||||||||    
T  32093985 cgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 43027504 - 43027403
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||| |||||||| ||||||||||| |||||||||       |||||||||| |||||||||| |||||||||||||||| | |||||||| |||    
T  43027504 tcacataatgcagtgtaaatacaagtgtcggtgtcgtgtca------gacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgc 43027411  T
Q  394 ttcatagc 401  Q
    ||||||||    
T  43027410 ttcatagc 43027403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 21880200 - 21880271
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||| || ||||||| ||||||||||    
T  21880200 gtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 254 - 398
Target Start/End: Complemental strand, 9408408 - 9408265
Alignment:
Q  254 agacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatg 353  Q
    ||||||||||| |||||||||| ||||||||||       |||||||||| ||||||||||||||||||| |||||| ||| |||| ||||||| | ||     
T  9408408 agacactgacacaccgacacaattaataatttgaaaaaa-tcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacacgatatata 9408310  T
Q  354 tccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    ||||||||    ||||||||||||| | || ||||| ||||||||    
T  9408309 tccgacaccaaaacacgcctaatccgaagaatgtccgtgcttcat 9408265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 294 - 396
Target Start/End: Complemental strand, 27229346 - 27229244
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||| |||||||||| |||| ||| |||||||||  |||| ||||||| || ||| ||||||| ||||||||||||| | |||| |||||||||    
T  27229346 tcacataatttagtgtaattataagtatcggtgtcgtgtcactgtcagacacgatacgtgttcgacactaggacacgcctaattcgaggaatgtccatgc 27229247  T
Q  394 ttc 396  Q
    |||    
T  27229246 ttc 27229244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 294 - 399
Target Start/End: Complemental strand, 11665475 - 11665370
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||| |||||| ||||||||||||| ||||| ||||| ||||||||| |||||||||| |  ||||  ||||| | |||| ||||| |||    
T  11665475 tcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccgacaccgaaacacatctaatacgaggaatgtccgtgc 11665376  T
Q  394 ttcata 399  Q
    ||||||    
T  11665375 ttcata 11665370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 41414911 - 41415008
Alignment:
Q  305 agtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    ||||||||||||||||||| |||||| ||| ||||| |||| | |||| |||||||  ||| |||||||||| ||| ||||||||||| |||||||||    
T  41414911 agtgtaattacaagtgtcggtgtcgtatcgatgtcgtacactatacatatccgacaacggggcacgcctaattcaaagagtgtccatgtttcatagct 41415008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 329 - 401
Target Start/End: Original strand, 598256 - 598328
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    |||||| |||| |||||||||| |||||||||| |||||||||||||||| || ||||||| |||||||||||    
T  598256 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagc 598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 296 - 395
Target Start/End: Original strand, 13770717 - 13770810
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||||||||||||||||||||||||||| |||||      |||||||||| |||| |||||||||| || ||||||||||||| | |||||||| |||||    
T  13770717 acataattcagtgtaattacaagtgtcgttgtcg------tgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 329 - 399
Target Start/End: Original strand, 20549839 - 20549909
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||| |||||||||| |||||||||||||| || |||||||||||||| ||||||| || |||||||||    
T  20549839 gtgtcggtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcata 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 298 - 400
Target Start/End: Original strand, 21930656 - 21930758
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    |||||||| | |||||||||||||||||||||||||  ||| |||||| | || |||||||| | || |||| |||||||| | ||| ||||||||||||    
T  21930656 ataattcattttaattacaagtgtcgatgtcgtgtcagtgttggacacaagacgtgtccgacgccggaacacacctaatccgaagagagtccatgcttca 21930755  T
Q  398 tag 400  Q
    |||    
T  21930756 tag 21930758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 298 - 346
Target Start/End: Complemental strand, 11272617 - 11272569
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacg 346  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  11272617 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacg 11272569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 329 - 401
Target Start/End: Original strand, 21864856 - 21864928
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    |||||| ||||||||||||||| |||||||||| |||||||| ||||| | |||||||||  |||||||||||    
T  21864856 gtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatagc 21864928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 254 - 387
Target Start/End: Complemental strand, 6630986 - 6630854
Alignment:
Q  254 agacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatg 353  Q
    |||||||||||  ||||||| ||||||||||||       |||| |||||||||||||||| | ||||||||||||||| | |||||||||| |||| ||    
T  6630986 agacactgacacgccgacaccactaataatttgagaaag-tcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtg 6630888  T
Q  354 tccgacactgggacacgcctaatccaaggagtgt 387  Q
     |||||||   ||||| |||||||  ||||||||    
T  6630887 cccgacaccaagacacacctaatctgaggagtgt 6630854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 15680857 - 15680928
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||| |||||||||| | |||||| ||||| | |||||||||| ||||||||||    
T  15680857 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 294 - 377
Target Start/End: Original strand, 21560527 - 21560610
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatc 377  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||||  |||||| |||||||  |||| |  ||||||||||||    
T  21560527 tcacataattcagtgtaattacaagtgtcggtgtcgtatcggtgtcaaacacgatacatgtctaacaccgaaacacgcctaatc 21560610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 33994260 - 33994331
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| |||| |||||||||||||||| |||| | ||||||||||||||||||||||| | || |||||||    
T  33994260 gtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcatag 33994331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 296 - 377
Target Start/End: Original strand, 6028651 - 6028732
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatc 377  Q
    |||||||| | ||||||||||| ||||| |||||||||  ||||| |||||||||  || |||||||| |||||||||||||    
T  6028651 acataatttaatgtaattacaaatgtcggtgtcgtgtcagtgtcgaacacgacacgagttcgacactgagacacgcctaatc 6028732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 8234201 - 8234245
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaa 380  Q
    |||||||||||||||||||||||||| | ||||||||||||||||    
T  8234201 tgtcggacacgacacatgtccgacaccgagacacgcctaatccaa 8234245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 18039023 - 18039063
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcg 334  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  18039023 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcg 18039063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 29763187 - 29763127
Alignment:
Q  342 acacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    ||||||||| |||||||||   ||||||||||||||| |||||||||| ||||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatagct 29763127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 296 - 399
Target Start/End: Original strand, 4794915 - 4795018
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    ||||||||||||||||||| |||||||| |  ||| ||| ||||||||||||||| | || |||||    ||||| |||||||||| ||||||  |||||    
T  4794915 acataattcagtgtaattataagtgtcggtaccgtatcggtgtcggacacgacacgtatctgacacctaaacacgtctaatccaagaagtgtctgtgctt 4795014  T
Q  396 cata 399  Q
    ||||    
T  4795015 cata 4795018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 1433514 - 1433584
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagcttgta 406  Q
    ||||||||| ||||  ||||||||||  ||||||| ||||||| |||||||||| ||||||||||| ||||    
T  1433514 tgtcggacaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatagcatgta 1433584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 400
Target Start/End: Original strand, 11831460 - 11831562
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    |||||| ||||||||||||||| |   |||||| ||| ||||||||||||||  |||  ||||| ||  ||||||||||||||| | ||| |||||||||    
T  11831460 ataatttagtgtaattacaagtattcgtgtcgtatcggtgtcggacacgacatgtgtttgacaccggagcacgcctaatccaagaactgttcatgcttca 11831559  T
Q  398 tag 400  Q
    |||    
T  11831560 tag 11831562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 376
Target Start/End: Original strand, 15902846 - 15902928
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaat 376  Q
    |||||||||| |||||||||| | |||||| ||| |||||| | |||||||||||||||| |||| ||  |||||||| ||||    
T  15902846 tcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacgacacatgcccgagaccaggacacgcttaat 15902928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 396
Target Start/End: Complemental strand, 40287356 - 40287306
Alignment:
Q  346 gacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttc 396  Q
    |||||||||||||||| |||||| ||||||||| |||||||||| ||||||    
T  40287356 gacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 400
Target Start/End: Original strand, 5307326 - 5307375
Alignment:
Q  351 atgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||| ||||||| |||||||||||||||||||||||| | ||||||||||    
T  5307326 atgtgcgacactaggacacgcctaatccaaggagtgtacgtgcttcatag 5307375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 356 - 397
Target Start/End: Complemental strand, 8842323 - 8842282
Alignment:
Q  356 cgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    |||||| ||||||||||||||||||||||||||| |||||||    
T  8842323 cgacaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 599 - 648
Target Start/End: Complemental strand, 9681884 - 9681835
Alignment:
Q  599 catcctttcaagcactataccattttccattaaatatttagctaagaaaa 648  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||| ||||    
T  9681884 catcctttcaagcattattccattttccatgaaatatttagctaaaaaaa 9681835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 10043002 - 10043051
Alignment:
Q  339 cggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtc 388  Q
    |||| |||||||||||||||||| |||||||| |||||||||||| ||||    
T  10043002 cggatacgacacatgtccgacaccgggacacgtctaatccaaggaatgtc 10043051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 373
Target Start/End: Complemental strand, 22801774 - 22801697
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcct 373  Q
    |||||||||| |||||| |||||||||| |||  ||||  |||| ||||| |||| |||| |||||||||||||||||    
T  22801774 acataattcactgtaatcacaagtgtcggtgtattgtcagtgtctgacaccacacttgtcggacactgggacacgcct 22801697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 27945067 - 27945104
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtc 333  Q
    |||||||||||||||||||||||||||| |||||||||    
T  27945067 acataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 7133284 - 7133212
Alignment:
Q  329 gtgtcgttgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| |||||||||| ||| | |||||||||||||||||| |||||||  ||||| |||| ||||||||||    
T  7133284 gtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 401
Target Start/End: Complemental strand, 18213044 - 18212972
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    |||||| ||||||||||||| | | || ||||| ||||||||||| |||| |||||||||  |||||||||||    
T  18213044 gtgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtgcttcatagc 18212972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 404
Target Start/End: Complemental strand, 40131987 - 40131935
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagcttg 404  Q
    |||||||||| |||||||| ||||||| |||||||||  ||||||||||||||    
T  40131987 tgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcatagcttg 40131935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 400
Target Start/End: Original strand, 1401091 - 1401142
Alignment:
Q  349 acatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||  ||||||| |||||||  |||||||||||||||||||||    
T  1401091 acatgtccgacatcgggacacacctaatctgaggagtgtccatgcttcatag 1401142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 20545248 - 20545185
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    ||||| |||||||||||||||||||| ||||||||  |||| | |||||||||  |||||||||    
T  20545248 tgtcgtacacgacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcata 20545185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 388
Target Start/End: Original strand, 26733352 - 26733411
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtc 388  Q
    |||||| ||||||||||||| ||||||||| || || ||||||||||||| ||| |||||    
T  26733352 gtgtcggtgtcggacacgacgcatgtccgatacgggaacacgcctaatccgaggggtgtc 26733411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 330
Target Start/End: Original strand, 3991321 - 3991384
Alignment:
Q  266 accgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgt 330  Q
    |||||||||||||||||||||       |||||||||||||| ||||||||||||||| ||||||    
T  3991321 accgacacaactaataatttgaaaaaa-tcacataattcagtataattacaagtgtcggtgtcgt 3991384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 230 - 264
Target Start/End: Complemental strand, 21139091 - 21139057
Alignment:
Q  230 gctatgaagcacggatacagacatagacactgaca 264  Q
    ||||||||||||||||||||||| |||||||||||    
T  21139091 gctatgaagcacggatacagacacagacactgaca 21139057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 26329416 - 26329354
Alignment:
Q  295 cacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccg 357  Q
    |||| ||||||||||||||| | ||||||  ||||||||| |||| |||||||||| ||||||    
T  26329416 cacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtgtccg 26329354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 3991392 - 3991433
Alignment:
Q  360 actgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    ||||||||||||||||||| ||||||||||  ||||||||||    
T  3991392 actgggacacgcctaatccgaggagtgtccgggcttcatagc 3991433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 285
Target Start/End: Complemental strand, 7197397 - 7197340
Alignment:
Q  228 aggctatgaagcacggatacagacatagacactgacaaaccgacacaactaataattt 285  Q
    ||||||||||||||||||||  ||| ||||| |||||  |||||||| ||||||||||    
T  7197397 aggctatgaagcacggatacgaacacagacattgacacgccgacacagctaataattt 7197340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 15836488 - 15836439
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagt 385  Q
    ||||||||||||||||| |||| |||  |||||||||||||| |||||||    
T  15836488 tgtcggacacgacacatatccggcaccaggacacgcctaatctaaggagt 15836439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 28155637 - 28155674
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  28155637 ggacacgcctaatccaaggaatgtccgtgcttcatagc 28155674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 395
Target Start/End: Original strand, 43250019 - 43250118
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcg-tgtcgttgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||| ||||||||||| |||||||| ||||| |||||  ||||||||| ||| | ||||||||||  ||||||||||||| | |||||||||| |||    
T  43250019 acataatacagtgtaattataagtgtcg-tgtcggtgtcgc-gtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgc 43250116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 369
Target Start/End: Complemental strand, 48246806 - 48246773
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacac 369  Q
    ||||||||||||||||||||||||| ||||||||    
T  48246806 tgtcggacacgacacatgtccgacattgggacac 48246773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 9933328 - 9933364
Alignment:
Q  325 tgtcgtgtcgttgtcggacacgacacatgtccgacac 361  Q
    |||||||||| |||||||||||||||||||| |||||    
T  9933328 tgtcgtgtcggtgtcggacacgacacatgtctgacac 9933364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 22602745 - 22602705
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcg 334  Q
    ||||||||||||||||||||| | |||||| ||||||||||    
T  22602745 tcacataattcagtgtaattatatgtgtcggtgtcgtgtcg 22602705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 22868108 - 22868164
Alignment:
Q  342 acacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||| |||| |||| ||||| ||||||| | |||||| |||||||||||||||||||    
T  22868108 acacaacacgtgtcagacaccgggacacacataatccgaggagtgtccatgcttcat 22868164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 403
Target Start/End: Complemental strand, 29812635 - 29812595
Alignment:
Q  363 gggacacgcctaatccaaggagtgtccatgcttcatagctt 403  Q
    |||||||||||||||| || ||||||| |||||||||||||    
T  29812635 gggacacgcctaatccgagaagtgtccgtgcttcatagctt 29812595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 366 - 402
Target Start/End: Original strand, 30813882 - 30813918
Alignment:
Q  366 acacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  30813882 acacgcctaatccgaggagtgtccgtgcttcatagct 30813918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 400
Target Start/End: Original strand, 35862034 - 35862070
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  35862034 ggacacgcctaatccgaggagtgtccgtgcttcatag 35862070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 43243103 - 43243139
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgt 332  Q
    |||||||| | ||||||||||||||||||||||||||    
T  43243103 acataatttaatgtaattacaagtgtcgatgtcgtgt 43243139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 347 - 395
Target Start/End: Complemental strand, 45056922 - 45056874
Alignment:
Q  347 acacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||||||||| ||||| ||||| | |||||||||||||||||| |||||    
T  45056922 acacatgtccaacacttggacatggctaatccaaggagtgtccgtgctt 45056874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 249 - 400
Target Start/End: Complemental strand, 41961729 - 41961579
Alignment:
Q  249 gacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgac 348  Q
    |||| |||||||||||  ||| ||||||||||||||||       |||||| |||| |||||||||||||||||| |||||||||| | |||||||||||    
T  41961729 gacacagacactgacacgccgtcacaactaataatttgaaaata-tcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgac 41961631  T
Q  349 acatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    || ||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  41961630 acgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 240 - 398
Target Start/End: Complemental strand, 4987380 - 4987222
Alignment:
Q  240 acggatacagacataga-cactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgt 338  Q
    |||||||||||| |||| ||||||||  |||||||| |||||||||||       |||||||||||||||||||||||||||| | || ||||||| |||    
T  4987380 acggatacagacctagaacactgacacgccgacacagctaataatttgaaaaaa-tcacataattcagtgtaattacaagtgttggtgacgtgtcggtgt 4987282  T
Q  339 cggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
     ||||||||||| |||||||||| |||||||||||||||| |||||||||| | ||||||    
T  4987281 tggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 34185158 - 34185052
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| |||||||||||||||||||||||| |||||||||  ||||||||| ||||  |||||||||| |||||||||||||||| |||||||||| |||    
T  34185158 tcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 34185059  T
Q  394 ttcatag 400  Q
    |||||||    
T  34185058 ttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 234 - 400
Target Start/End: Original strand, 14209079 - 14209243
Alignment:
Q  234 tgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtc 333  Q
    |||||||||||| | |||| |||||| ||||  |||||||||||||||||||        |||||||||||||||||||||||||||||  |||||||||    
T  14209079 tgaagcacggatgcggacacagacac-gacacgccgacacaactaataattt-taaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtc 14209176  T
Q  334 gttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    | ||||||||||||||| ||| |||||  |||| || ||||||||||| ||||||| ||||||||||    
T  14209177 ggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcatag 14209243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 231 - 388
Target Start/End: Original strand, 28812477 - 28812633
Alignment:
Q  231 ctatgaagcacggatacagacatag-acactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcg 329  Q
    ||||||||||||||||||||||  | |||| ||||  ||||||||||||||||||||       ||||||||||||||||| |||||||||||| |||||    
T  28812477 ctatgaagcacggatacagacaacggacac-gacacgccgacacaactaataatttgaagaaa-tcacataattcagtgtagttacaagtgtcggtgtcg 28812574  T
Q  330 tgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtc 388  Q
    ||| | |||| ||||||| ||||||||||||   ||||||||||||||| |||||||||    
T  28812575 tgttggtgtcagacacgatacatgtccgacagcaggacacgcctaatccgaggagtgtc 28812633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 294 - 398
Target Start/End: Original strand, 28918025 - 28918120
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||||||||| |||||||         |||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  28918025 tcacataattcagtgtaattacaagtgtcggtgtcgtg---------gacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgc 28918115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 40993346 - 40993275
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  40993346 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 298 - 399
Target Start/End: Original strand, 14216920 - 14217021
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    |||||||||||||||||||||||||  ||||||||   ||||||||||||||| ||| |||||||||||||| |||||||| || ||||||| |||||||    
T  14216920 ataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttca 14217019  T
Q  398 ta 399  Q
    ||    
T  14217020 ta 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 298 - 399
Target Start/End: Original strand, 14223049 - 14223150
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    |||||||||||||||||||||||||  ||||||||   ||||||||||||||| ||| |||||||||||||| |||||||| || ||||||| |||||||    
T  14223049 ataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttca 14223148  T
Q  398 ta 399  Q
    ||    
T  14223149 ta 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 298 - 402
Target Start/End: Complemental strand, 15796325 - 15796221
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    |||||||||||||||||||| ||||| |||||||| | |||||||||| |||| ||||| |||| || ||||||||||||||| |||||| | |||||||    
T  15796325 ataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttca 15796226  T
Q  398 tagct 402  Q
    |||||    
T  15796225 tagct 15796221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 49651821 - 49651716
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||| ||||||||||||||||| ||||||||||    |||||||||||||| |||||||| ||||||| |||||||| || ||||||| |||    
T  49651821 tcacataattcactgtaattacaagtgtcggtgtcgtgtcggac-cggacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgc 49651723  T
Q  394 ttcatag 400  Q
    |||||||    
T  49651722 ttcatag 49651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 27505270 - 27505371
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||| ||||||||||||||||||| |||||||||       |||||||||| |||||||||| |||||| ||||||||| |||||||||| |||    
T  27505270 tcacataattaagtgtaattacaagtgtcggtgtcgtgtct------gacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgc 27505363  T
Q  394 ttcatagc 401  Q
    ||||||||    
T  27505364 ttcatagc 27505371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 232 - 398
Target Start/End: Original strand, 29508407 - 29508567
Alignment:
Q  232 tatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtg 331  Q
    |||||||||| | ||||||||| |||| ||||| ||||| || ||||||||||||       ||| ||||||||||||||||| | |||||||||| |      
T  29508407 tatgaagcactgttacagacatggacattgacacaccgataccactaataatttgaaaaaa-tcatataattcagtgtaattatatgtgtcgatgttgg- 29508504  T
Q  332 tcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
        |||||||||||||||| ||||||||| |||||||| |||||||||| ||||||| ||||||||    
T  29508505 ----tgtcggacacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 298 - 400
Target Start/End: Complemental strand, 8039866 - 8039764
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    ||||||||||||||||| | |||||| |||||||||| ||||||||| || ||||||||||||| ||||||||| |||||| | |||| ||  |||||||    
T  8039866 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacaccgggacacgcttaatccgaagagtatctgtgcttca 8039767  T
Q  398 tag 400  Q
    |||    
T  8039766 tag 8039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 294 - 376
Target Start/End: Original strand, 14832123 - 14832205
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaat 376  Q
    |||||||| ||| ||||||||||||||||  |||||||||| | ||||||||||||| |||||||||| ||||||||||||||    
T  14832123 tcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 55401123 - 55401196
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    |||||| ||||||||||||||| |||||||||| | |||||||||||||| |||||||||| ||||||||||||    
T  55401123 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatagct 55401196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 232 - 400
Target Start/End: Original strand, 20503429 - 20503584
Alignment:
Q  232 tatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtg 331  Q
    |||||||||||||||| ||||  ||||||||||  |||||||||| |||||||||       | |||||||||||||||||||||||||||| ||| |      
T  20503429 tatgaagcacggatacggacac-gacactgacacgccgacacaacaaataatttgaaaaaa-tgacataattcagtgtaattacaagtgtcggtgttg-- 20503524  T
Q  332 tcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
             ||||||||||||||| ||||| |||||||||||||||| |||||||||| ||||||||||    
T  20503525 ---------gacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 298 - 400
Target Start/End: Original strand, 16789040 - 16789141
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    ||||||||||||||||| |||||| | |||||||||  ||||||||| ||||||||||| |||| ||||||| ||||||   |||||||||| |||||||    
T  16789040 ataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgacacatgtccaacac-gggacacacctaatttgaggagtgtccgtgcttca 16789138  T
Q  398 tag 400  Q
    |||    
T  16789139 tag 16789141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 329 - 401
Target Start/End: Original strand, 10955000 - 10955075
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaagg---agtgtccatgcttcatagc 401  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||| |||   ||||||| |||||||||||    
T  10955000 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 10955075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 249 - 399
Target Start/End: Complemental strand, 16000095 - 15999951
Alignment:
Q  249 gacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgac 348  Q
    |||| |||||||||||  |||||||||||||||||||        | |||||||||||||||| |||||||||||     ||||||    || |||||||    
T  16000095 gacacagacactgacacgccgacacaactaataattt-aaaaaaataacataattcagtgtaactacaagtgtcg-----gtgtcggacacgtacacgac 16000002  T
Q  349 acatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    || |||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  16000001 acgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 7171556 - 7171620
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||||||  |||||||||||    
T  7171556 tgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgtatatgcttcatag 7171620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 329 - 405
Target Start/End: Complemental strand, 13845536 - 13845460
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagcttgt 405  Q
    |||||| |||||||||||| || |||| ||||| | ||||||||| ||||||||||||||| |||||||||||||||    
T  13845536 gtgtcggtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcatagcttgt 13845460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 249 - 396
Target Start/End: Original strand, 14829670 - 14829816
Alignment:
Q  249 gacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgac 348  Q
    |||| |||||||||||  |||||||| |||||||||||       ||||||||||||  |||||||||||||||| |||||||||| ||| ||||||||     
T  14829670 gacacagacactgacacgccgacacagctaataatttgaaaaa--tcacataattcatggtaattacaagtgtcggtgtcgtgtcggtgttggacacgag 14829767  T
Q  349 acat-gtccgacactgggacacgcctaatccaaggagtgtccatgcttc 396  Q
    |  | || |||||| |||||||||||||||  |||| ||||| ||||||    
T  14829768 atgtggttcgacaccgggacacgcctaatctgaggaatgtccgtgcttc 14829816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 231 - 350
Target Start/End: Original strand, 34910279 - 34910397
Alignment:
Q  231 ctatgaagcacggatacagacat-agacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcg 329  Q
    ||||||||||||||||| ||||  |||||| ||||  ||||||||||||||||||||       ||||||||||||||||||||||||| |||| |||||    
T  34910279 ctatgaagcacggatacggacaccagacac-gacacgccgacacaactaataatttgaaaaaa-tcacataattcagtgtaattacaagagtcggtgtcg 34910376  T
Q  330 tgtcgttgtcggacacgacac 350  Q
    | ||| ||||||||| |||||    
T  34910377 tatcggtgtcggacatgacac 34910397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 55212987 - 55213092
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||| |||| |||||||||||||| ||| |||||| |||||| ||| |||| |||||||||| | ||||||| ||||||||| ||| ||| |||    
T  55212987 tcacataatttagtgcaattacaagtgtcggtgt-gtgtcggtgtcgggcacaacacgtgtccgacaccgagacacgcataatccaagaagtatccgtgc 55213085  T
Q  394 ttcatag 400  Q
    | |||||    
T  55213086 tacatag 55213092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 3631739 - 3631792
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtcc 389  Q
    ||||||||||||||||||||||||||  ||||||||||| ||| ||||||||||    
T  3631739 tgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtcc 3631792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 329 - 399
Target Start/End: Complemental strand, 8789561 - 8789489
Alignment:
Q  329 gtgtcgttgtcggacacgacaca--tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||| ||||||||||||||||  |||| ||||| | |||||||||||||| |||||||||| |||||||||    
T  8789561 gtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 13806270 - 13806370
Alignment:
Q  304 cagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagctt 403  Q
    |||| |||||| | |||||| |||||||||| |||  ||||| ||||||| ||||| | |||||||||||||||| | |||||||| |||||||| ||||    
T  13806270 cagtataattatatgtgtcggtgtcgtgtcggtgttagacacaacacatgaccgaccccgggacacgcctaatccga-gagtgtccgtgcttcatggctt 13806368  T
Q  404 gt 405  Q
    ||    
T  13806369 gt 13806370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 399
Target Start/End: Original strand, 37077384 - 37077488
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacg-acacatgtccgacactgggacacgcctaatccaaggagtgtccatgct 394  Q
    |||||||||| || ||| | | |||||  |||| ||||| ||||| ||||| || |||||||||||| ||||||| ||||||||||||| ||||| ||||    
T  37077384 acataattcaatggaatcatatgtgtcattgtcatgtcggtgtcgtacacggacgcatgtccgacacggggacacacctaatccaaggaatgtccgtgct 37077483  T
Q  395 tcata 399  Q
    |||||    
T  37077484 tcata 37077488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 750653 - 750590
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccg 357  Q
    |||||||||||  || |||||||||||||| |||||||||| | ||||||||||||| ||||||    
T  750653 tcacataattcgctgcaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccg 750590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 296 - 351
Target Start/End: Complemental strand, 16192783 - 16192728
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacaca 351  Q
    ||||||||||||||||||| | |||| |||||||||||| |||| |||||||||||    
T  16192783 acataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacgacaca 16192728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 400
Target Start/End: Complemental strand, 5407253 - 5407199
Alignment:
Q  346 gacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||| |||||||| |  ||||||||||||||||| |||||||||||||||||||    
T  5407253 gacacgtgtccgacgccaggacacgcctaatccaaagagtgtccatgcttcatag 5407199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 400
Target Start/End: Original strand, 8842378 - 8842448
Alignment:
Q  330 tgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||| |||| ||||||||||||||  || | || |||||||||||||| |||||||||| ||||||||||    
T  8842378 tgtcggtgtcagacacgacacatgttagatattgagacacgcctaatccgaggagtgtccgtgcttcatag 8842448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 396
Target Start/End: Original strand, 11665968 - 11666070
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| |||| |||||||||| | |||||| |||||||| | |||  |||||||||| |||| || |  || ||||||||||| |||||||||||| |||    
T  11665968 tcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgatatcggaacacgcctaattcaaggagtgtccgtgc 11666067  T
Q  394 ttc 396  Q
    |||    
T  11666068 ttc 11666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 402
Target Start/End: Complemental strand, 16789633 - 16789583
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    |||||||||  ||||||| |||||||| |||||||||||||||||||||||    
T  16789633 tgtccgacaacgggacacacctaatcctaggagtgtccatgcttcatagct 16789583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 25074866 - 25074915
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    |||||||||||||||||| |||||||| |||||||| | |||||||||||    
T  25074866 tgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatagc 25074915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 338 - 399
Target Start/End: Complemental strand, 32804546 - 32804485
Alignment:
Q  338 tcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||||||||||||||||| |||||  | ||||||||||  |||||||||| |||||||||    
T  32804546 tcggacacgacacatgtccgccactgaaaaacgcctaatctgaggagtgtccgtgcttcata 32804485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 3164019 - 3163971
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| | |||||||||||| | |||||||||||||||||||||    
T  3164019 tgtccgacaccgagacacgcctaattcgaggagtgtccatgcttcatag 3163971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 404
Target Start/End: Original strand, 8039289 - 8039341
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagcttg 404  Q
    |||||||| | ||||||| |||||||||||||||||  |||||||||||||||    
T  8039289 tgtccgactccgggacacacctaatccaaggagtgtttatgcttcatagcttg 8039341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 15864887 - 15864950
Alignment:
Q  336 tgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||||||| ||||| |||| ||||| |||||||||||||||||| |||||||| |||||||||    
T  15864887 tgtcggacaccgacacgtgtctgacac-gggacacgcctaatccaaagagtgtccgtgcttcata 15864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 323
Target Start/End: Complemental strand, 35994816 - 35994744
Alignment:
Q  249 gacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcg 323  Q
    ||||| |||| |||||| |||||||| |||||||||||       ||||||||||||||||||||||||||||||    
T  35994816 gacatggacaatgacaagccgacacagctaataatttgaaaaa--tcacataattcagtgtaattacaagtgtcg 35994744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 40052383 - 40052431
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| |||||||||||||||| |||||||| | ||||||||||    
T  40052383 tgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatag 40052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 1389909 - 1389956
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    ||||||||||  ||||| |||||||||||||||||||| |||||||||    
T  1389909 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 1389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 1509563 - 1509614
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacac 345  Q
    |||||||||| ||||||||||||||||||| |||||| ||| |||| |||||    
T  1509563 tcacataatttagtgtaattacaagtgtcggtgtcgtttcggtgtccgacac 1509614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 403
Target Start/End: Complemental strand, 4990948 - 4990909
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcatagctt 403  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  4990948 ggacacgcctaatccgaggagtgtccgtgcttcatagctt 4990909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 329
Target Start/End: Original strand, 25775533 - 25775568
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcg 329  Q
    |||||||||||||||||||||||||||||| |||||    
T  25775533 tcacataattcagtgtaattacaagtgtcggtgtcg 25775568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 34307790 - 34307735
Alignment:
Q  325 tgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaa 380  Q
    |||||||||| ||||||||||||||| | | ||| |||| ||||||||||||||||    
T  34307790 tgtcgtgtcggtgtcggacacgacacgtcttcgatactgagacacgcctaatccaa 34307735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 298 - 400
Target Start/End: Complemental strand, 17005650 - 17005548
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    ||||||||||||||||| |||||||| ||| |||| | |||| ||||  |||| |||| |||||  ||||||  ||||||| ||||||||   |||||||    
T  17005650 ataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgtctgacaccaggacacctctaatccgaggagtgtttgtgcttca 17005551  T
Q  398 tag 400  Q
    |||    
T  17005550 tag 17005548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 355
Target Start/End: Original strand, 21479104 - 21479198
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgt 354  Q
    ||||||||||  |||||||| |||||||||||       ||||| |||||||||||||||| |||||||     |||||| |||||||||||||||||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaa-tcacacaattcagtgtaattactagtgtcg-----gtgtcggtgtcggacacgacacatgt 21479197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 2408634 - 2408589
Alignment:
Q  356 cgacactgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    |||||| ||||||||||||||| ||||||| ||| |||||||||||    
T  2408634 cgacaccgggacacgcctaatctaaggagtctccgtgcttcatagc 2408589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 3164060 - 3164019
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgt 335  Q
    ||||||||||||||||||  |||||||| |||||||||||||    
T  3164060 tcacataattcagtgtaagaacaagtgttgatgtcgtgtcgt 3164019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 400
Target Start/End: Complemental strand, 3730145 - 3730108
Alignment:
Q  363 gggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  3730145 gggacacacctaatccgaggagtgtccatgcttcatag 3730108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 5441032 - 5440967
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacac-gcctaatccaaggagtgtccatgcttcatag 400  Q
    |||| |||||||||||||||| |||| | ||||| ||||||| | |||||||||| ||||||||||    
T  5441032 tgtcagacacgacacatgtccaacaccgagacacggcctaattcgaggagtgtccgtgcttcatag 5440967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 14747547 - 14747625
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtc 333  Q
    ||||||||||  |||||||| |||||||||||       |||||||||| |||||||||||||| |||  |||||||||    
T  14747547 gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaagggtccgtgtcgtgtc 14747625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 323
Target Start/End: Original strand, 26508134 - 26508163
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcg 323  Q
    ||||||||||||||||||||||||||||||    
T  26508134 tcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 4466588 - 4466540
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||||||| || || | |||||||||| ||||||||||    
T  4466588 tgtccgacactgggacacggcttattcgaggagtgtccgtgcttcatag 4466540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 4991000 - 4990964
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgt 332  Q
    ||||||||||||||||||||||||||||  |||||||    
T  4991000 acataattcagtgtaattacaagtgtcggcgtcgtgt 4990964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 296 - 400
Target Start/End: Original strand, 9800066 - 9800170
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    ||||||||| ||||||||  |||||||| |||||||||| | || || | || || |||| |||||  ||||||||||||||  ||| || ||| |||||    
T  9800066 acataattccgtgtaattgtaagtgtcggtgtcgtgtcggtatcagagatgatacgtgtcggacacctggacacgcctaatcggaggcgtttccgtgctt 9800165  T
Q  396 catag 400  Q
    |||||    
T  9800166 catag 9800170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 10455867 - 10455915
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||||||||  |||||||||||||||   ||||||||||    
T  10455867 tgtccgacactgggacacgtttaatccaaggagtgtatgtgcttcatag 10455915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 11610580 - 11610628
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||  |||||||||||||||  |||||||||| ||||||||||    
T  11610580 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 21211365 - 21211413
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||||||| |||||||| ||||||||   ||||||||||    
T  21211365 tgtccgacactgggacactcctaatccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 25948922 - 25948882
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcg 334  Q
    ||||||||||||||||||||| |||||| | ||||||||||    
T  25948922 tcacataattcagtgtaattataagtgttggtgtcgtgtcg 25948882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 26492209 - 26492145
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||||||||| |||||   |||||| ||||||| |||| |||||  |||||||||    
T  26492209 tgtcggacacgacacatgtctgacaccaagacacgtctaatccgaggaatgtccgcgcttcatag 26492145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 45451601 - 45451633
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacac 361  Q
    |||||| ||||||||||||||||||||||||||    
T  45451601 gtgtcggtgtcggacacgacacatgtccgacac 45451633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 296 - 399
Target Start/End: Original strand, 21542056 - 21542159
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| |    
T  21542056 acataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcat 21542155  T
Q  396 cata 399  Q
    ||||    
T  21542156 cata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 296 - 402
Target Start/End: Original strand, 21522776 - 21522882
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||| |||||| ||| |||||||||||||||||| |||||||| ||| |    
T  21522776 acataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcat 21522875  T
Q  396 catagct 402  Q
    |||||||    
T  21522876 catagct 21522882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 296 - 402
Target Start/End: Original strand, 21533342 - 21533448
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||| |||||| ||| |||||||||||||||||| |||||||| ||| |    
T  21533342 acataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcat 21533441  T
Q  396 catagct 402  Q
    |||||||    
T  21533442 catagct 21533448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 39698565 - 39698671
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||||||||  |||||||||| ||||||||||||||  | |||||||| | |||||||||||||| |||||||||| |||    
T  39698565 tcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgc 39698664  T
Q  394 ttcatag 400  Q
    |||||||    
T  39698665 ttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 7677729 - 7677836
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||| ||||| |||||||| |||||||||| |||| |||||| |||||||||||||| |||||||||||||||| ||||| |||  |||    
T  7677729 tcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgc 7677828  T
Q  394 ttcatagc 401  Q
    ||||||||    
T  7677829 ttcatagc 7677836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 255 - 400
Target Start/End: Original strand, 31084309 - 31084447
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgt 354  Q
    ||||||||||  |||||||| |||||||||||       |||||||||||| |||||||||||||||||||||||||||      ||||||||||| |||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaa-tcacataattcaatgtaattacaagtgtcgatgtcgtgtc------ggacacgacacgtgt 31084401  T
Q  355 ccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||| ||||||||| |||||||||| || |||||||    
T  31084402 ccgacactgggacatgcctaatccgaggagtgtccgtggttcatag 31084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 294 - 399
Target Start/End: Original strand, 6401522 - 6401627
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| ||| ||||||||||| | |||||| |||||||||  ||||||||||||||| |||| ||||| |||| |||||| ||||||||||||||| |||    
T  6401522 tcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgc 6401621  T
Q  394 ttcata 399  Q
    ||||||    
T  6401622 ttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 294 - 387
Target Start/End: Original strand, 19579725 - 19579818
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgt 387  Q
    |||||||||| |||| |||||||||||||| |||||||||  |||||||||||||| |||||  |||| |||||||||||||||| ||||||||    
T  19579725 tcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaatccgaggagtgt 19579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 21576780 - 21576684
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||||||||||||||||||           |||||||||| |||| |||||||||||||||||||||| |||||||||| |||    
T  21576780 tcacataattcagtgtaattacaagtgtcgatgtcg-----------gacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgc 21576692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 298 - 388
Target Start/End: Original strand, 15382507 - 15382592
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtc 388  Q
    |||||||||| |||||||||||||||     |||||| ||| |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  15382507 ataattcagtataattacaagtgtcg-----gtgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 21814285 - 21814391
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| ||| ||||||||||| | |||||| |||||||||| ||||||||||||||| |||| | ||| ||||||||||| ||||||||| ||| | |||    
T  21814285 tcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgc 21814384  T
Q  394 ttcatag 400  Q
    |||||||    
T  21814385 ttcatag 21814391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 329 - 398
Target Start/End: Complemental strand, 30502399 - 30502330
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| | ||||||||    
T  30502399 gtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 329 - 398
Target Start/End: Complemental strand, 30542742 - 30542673
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| | ||||||||    
T  30542742 gtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 254 - 376
Target Start/End: Original strand, 30183534 - 30183655
Alignment:
Q  254 agacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatg 353  Q
    ||||||||| |  ||||||||||||||||||||       |||||| |||| || ||||||||||||||| |||||||| | | || |||||||||| ||    
T  30183534 agacactgatatgccgacacaactaataatttgaaaata-tcacattattcggtttaattacaagtgtcggtgtcgtgttggtatcagacacgacacgtg 30183632  T
Q  354 tccgacactgggacacgcctaat 376  Q
    |||||||||||||||||||||||    
T  30183633 tccgacactgggacacgcctaat 30183655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 37328879 - 37328775
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| ||||||||||||||||| |||||| |||||||||| ||||||||||||  |  |||||| || |||| |||| |||||| |||||||||| |||    
T  37328879 tcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacacgatgc--gtccgataccgggatacgcttaatccgaggagtgtccgtgc 37328782  T
Q  394 ttcatag 400  Q
    |||||||    
T  37328781 ttcatag 37328775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 294 - 399
Target Start/End: Original strand, 3966527 - 3966632
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| ||||||||||||||| | |||||| |||||||||  |||||||||| |||  ||||| |||  |||||||| ||||||| |||||||||| |||    
T  3966527 tcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaatccgaggagtgtccgtgc 3966626  T
Q  394 ttcata 399  Q
    ||||||    
T  3966627 ttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 329 - 397
Target Start/End: Complemental strand, 39268609 - 39268541
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    |||||| ||| ||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||    
T  39268609 gtgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 230 - 323
Target Start/End: Original strand, 14674230 - 14674322
Alignment:
Q  230 gctatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcg 323  Q
    |||||||||||||||||||||||  ||||||||||  |||||||| |||||||||||       |||||||||| |||||||||||||||||||    
T  14674230 gctatgaagcacggatacagacacggacactgacacgccgacacagctaataatttg-aaaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 17088309 - 17088399
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtcc 389  Q
    |||||||||| ||||| ||||||||||||  |||||||||| |||||| ||||     |||||||||| |||||||||||||||| ||||||||||    
T  17088309 tcacataatttagtgtgattacaagtgtcactgtcgtgtcggtgtcggtcacg-----tgtccgacaccgggacacgcctaatccgaggagtgtcc 17088399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 330 - 400
Target Start/End: Original strand, 17123097 - 17123166
Alignment:
Q  330 tgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||| ||| |||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  17123097 tgtcggtgttggacacgaaacatgtccgacac-gggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 329 - 398
Target Start/End: Complemental strand, 21191067 - 21190998
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||| |||||||||| |||| |||||||| | |||||||||||||||| |||||||||| ||||||||    
T  21191067 gtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 21351978 - 21351889
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacac 345  Q
    |||||||||| ||||||||||||||||||| |       |||||||||||||||||||||||||||||| |||| ||||| |||| |||||    
T  21351978 gacactgacacaccgacacaactaataatt-ggaaaaagtcacataattcagtgtaattacaagtgtcggtgtcatgtcggtgtccgacac 21351889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 23016024 - 23015926
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||| | |||||||||| || |||      |||||||||  ||||||||| ||||||||||||||||| ||||||||||  ||    
T  23016024 tcacataattcagtgtaattataggtgtcgatgttgtatcg------gacacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagc 23015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 28588685 - 28588614
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||||| || |||||  |||||||| |||||| | |||||||||||||||||||    
T  28588685 gtgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcatag 28588614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 231 - 398
Target Start/End: Original strand, 43001762 - 43001922
Alignment:
Q  231 ctatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgt 330  Q
    ||||||||||||||||| ||||  ||||||||||   ||||||  |||||||||||       | |||||||||||||||||||||||||| | ||  ||    
T  43001762 ctatgaagcacggatacggacacggacactgacatgtcgacactgctaataatttgaaaaaatt-acataattcagtgtaattacaagtgttggtgatgt 43001860  T
Q  331 gtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||      ||||||||||| ||||  ||||  ||||||||||||||| |||||||||| ||||||||    
T  43001861 gtc------ggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 43564929 - 43565000
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||  |||||||| | |||||||||||||||| || ||||||| ||||||||||    
T  43564929 gtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 30098350 - 30098456
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||| |||||||| |  ||||| | ||| |||  ||||||||||||||| |||| |||||  |||||| |||||||| |||| ||||| |||    
T  30098350 tcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgc 30098449  T
Q  394 ttcatag 400  Q
    |||||||    
T  30098450 ttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 40131645 - 40131751
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||| |||||| || | ||| |||||| ||| |||| ||||||||   |||| |||| ||||||||| ||| |||||||||||||| ||     
T  40131645 tcacataattcagtttaattataaatatcggtgtcgtatcgatgtcagacacgacttgtgtctgacattgggacacgtctactccaaggagtgtccgtgt 40131744  T
Q  394 ttcatag 400  Q
    |||||||    
T  40131745 ttcatag 40131751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 19453087 - 19452998
Alignment:
Q  308 gtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    ||||||| | |||||| |||||||||  ||||||||||||||||||||  |||| | || |||||| |||||||||| |||| |||||||    
T  19453087 gtaattatatgtgtcggtgtcgtgtcaatgtcggacacgacacatgtctcacacggagatacgccttatccaaggagcgtccgtgcttca 19452998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 401
Target Start/End: Complemental strand, 21194123 - 21194062
Alignment:
Q  340 ggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    |||||||||||||||| ||||| ||| |||||||||||| |||||||||| ||||| |||||    
T  21194123 ggacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttatagc 21194062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 14873577 - 14873641
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||| | |||| ||||| |||| |||||||||||||||| |||||||||| ||||||||||    
T  14873577 tgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 376
Target Start/End: Complemental strand, 36642795 - 36642716
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaat 376  Q
    ||||| || ||||||| || |||||||| |||| ||| | ||||||||||||||| |||||||||| ||||||||||||||    
T  36642795 acatattttagtgtaaatataagtgtcggtgtcatgttggtgtcggacacgacacgtgtccgacac-gggacacgcctaat 36642716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 294 - 402
Target Start/End: Complemental strand, 41091292 - 41091184
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||| | ||||||||||||||||  |||||||| |||||  ||||  ||||   | |||| ||||||  |||||||| | |||    
T  41091292 tcacataattcagtgtaattatatgtgtcgatgtcgtgtcaatgtcggacgcgacatgtgtctaacaccaaggcacgtctaatctgaggagtgttcgtgc 41091193  T
Q  394 ttcatagct 402  Q
    |||||||||    
T  41091192 ttcatagct 41091184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 30099049 - 30098982
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttc 396  Q
    |||||| ||||||| ||||||| |||| ||||| ||||||||||| ||||||||||||| | ||||||    
T  30099049 gtgtcggtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 42893408 - 42893479
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| |||| ||||| |||| ||||||||||  |||||||||||||   |||||||||||||||||||||    
T  42893408 gtgtcggtgtcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcatag 42893479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 19820389 - 19820328
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||   |||||||||| |||||||||||||||  |||||||||| ||||||||||    
T  19820389 tgtcggacacgac---tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 24238661 - 24238603
Alignment:
Q  340 ggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    ||||||||||| ||||| ||||||||||| || |||||| |||||||||| ||||||||    
T  24238661 ggacacgacacgtgtccaacactgggacatgcataatcctaggagtgtccgtgcttcat 24238603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 21319976 - 21319927
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacga 347  Q
    |||||||| |||||| ||||||||||||||| ||||| ||||||||||||    
T  21319976 ataattcaatgtaatcacaagtgtcgatgtcatgtcggtgtcggacacga 21319927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 348 - 405
Target Start/End: Complemental strand, 38464365 - 38464308
Alignment:
Q  348 cacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagcttgt 405  Q
    |||||||||||||| ||||||| |||||||| |||||||||  |||||||||| ||||    
T  38464365 cacatgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcataggttgt 38464308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 401
Target Start/End: Original strand, 39205940 - 39206005
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    |||| |||||||||| || ||||||| |||| |||  |||||||||||||||| ||||||||||||    
T  39205940 tgtccgacacgacacgtgcccgacaccgggatacgtttaatccaaggagtgtctatgcttcatagc 39206005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 13287434 - 13287383
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacg 346  Q
    |||||||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  13287434 tcacataattcagtgtaactacaagtgtcggtgtcgtgtc-ctgtcggacacg 13287383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 19552578 - 19552476
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||| ||||||  || ||||||||||||||||||| |||| |||| |     ||||||||||| |||||| |||||||| |||||||||| ||     
T  19552578 tcacataattaagtgta--tataagtgtcgatgtcgtgtcggtgtcagacaagtgt--tgtccgacacttggacacacctaatccgaggagtgtccgtgt 19552483  T
Q  394 ttcatag 400  Q
    |||||||    
T  19552482 ttcatag 19552476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 32630739 - 32630675
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||| ||||||| ||||||||| || ||||| |||||| | ||||||||| |||||||||||    
T  32630739 tgtcggatacgacacgtgtccgacattgagacacacctaattcgaggagtgtctatgcttcatag 32630675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 286
Target Start/End: Original strand, 6035445 - 6035500
Alignment:
Q  231 ctatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttg 286  Q
    |||||||||||||||| ||||| |||||||||||  |||||||  |||||||||||    
T  6035445 ctatgaagcacggatatagacaaagacactgacacgccgacaccgctaataatttg 6035500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 329
Target Start/End: Original strand, 6247646 - 6247681
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcg 329  Q
    |||||||||||||||||||||||||||||| |||||    
T  6247646 tcacataattcagtgtaattacaagtgtcggtgtcg 6247681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 400
Target Start/End: Original strand, 11685966 - 11686068
Alignment:
Q  297 cataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttc 396  Q
    ||||||| |||||||||| | |||||| |||||| ||| ||||||||||||||| ||||| | ||   | |||| ||||||  |||||||||| ||||||    
T  11685966 cataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgtccaaaaccaaggcacggctaatcggaggagtgtccgtgcttc 11686064  T
Q  397 atag 400  Q
    ||||    
T  11686065 atag 11686068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 329
Target Start/End: Original strand, 15884012 - 15884047
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcg 329  Q
    |||||||||||||||||||||||||||||| |||||    
T  15884012 tcacataattcagtgtaattacaagtgtcggtgtcg 15884047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 388
Target Start/End: Original strand, 6418056 - 6418150
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtc 388  Q
    |||||| ||||  |||||||| | ||||||| ||||| ||| ||||| ||||||||||||| ||| ||| ||| ||| ||||| ||| |||||||    
T  6418056 tcacatgattctatgtaattatatgtgtcgacgtcgtatcggtgtcgaacacgacacatgttcgatactaggatacgtctaattcaatgagtgtc 6418150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 16304428 - 16304366
Alignment:
Q  338 tcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||| || ||||||| | |||||| ||||||| |||| ||||| ||||||||||    
T  16304428 tcggacacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcatag 16304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 21191129 - 21191062
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcg 323  Q
    ||||||||||  |||||||| |||||||||||       ||||||||||||||||||||||||||||||    
T  21191129 gacactgacatgccgacacagctaataatttgaaaaaa-tcacataattcagtgtaattacaagtgtcg 21191062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 388
Target Start/End: Original strand, 39342511 - 39342549
Alignment:
Q  350 catgtccgacactgggacacgcctaatccaaggagtgtc 388  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  39342511 catgtcagacaccgggacacgcctaatccaaggagtgtc 39342549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 323
Target Start/End: Complemental strand, 7218302 - 7218273
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcg 323  Q
    ||||||||||||||||||||||||||||||    
T  7218302 tcacataattcagtgtaattacaagtgtcg 7218273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 333
Target Start/End: Original strand, 30135311 - 30135377
Alignment:
Q  267 ccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtc 333  Q
    ||||||||||||||||||||       |||||||| ||| ||||||||||||||||| |||| ||||    
T  30135311 ccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcggtgtcatgtc 30135377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 400
Target Start/End: Original strand, 35017125 - 35017162
Alignment:
Q  363 gggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  35017125 gggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 401
Target Start/End: Original strand, 42029807 - 42029872
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    |||||||||||||||||||| | |||   ||||||||| |||| |||||||||| ||| |||||||    
T  42029807 tgtcggacacgacacatgtctgtcacgtagacacgccttatccgaggagtgtccgtgcatcatagc 42029872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 43554570 - 43554634
Alignment:
Q  325 tgtcgtgtcgttgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtcc 389  Q
    |||||||||| |||||||||| ||| | |||||||||| |||||||||||||||| || |||||||    
T  43554570 tgtcgtgtcggtgtcggacaccgacgcgtgtccgacac-gggacacgcctaatccgagaagtgtcc 43554634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 4105338 - 4105374
Alignment:
Q  360 actgggacacgcctaatccaaggagtgtccatgcttc 396  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  4105338 actgggacacgcctaatccgaggagtgtccgtgcttc 4105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 6770596 - 6770655
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||||||||||     ||| ||||||||||||| | |||||||| ||||||||||    
T  6770596 tgtcggacacgacacatgtcc-----tggtacacgcctaatccgaagagtgtccgtgcttcatag 6770655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 400
Target Start/End: Original strand, 10298633 - 10298669
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  10298633 ggacacgcctaatccgaggagtgtccgtgcttcatag 10298669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 22423800 - 22423764
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  22423800 ggacacgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 27932290 - 27932354
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||| |||| |||||  ||||||||||||| | ||||||||   ||||||||||    
T  27932290 tgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcatag 27932354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 39695998 - 39695951
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| |||||||||||||||| |||||||||  ||||||||||    
T  39695998 tgtccgacac-gggacacgcctaatcctaggagtgtcggtgcttcatag 39695951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 3884 - 3778
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||||||||  |||||||| | |||||||||||||||||||||||||  | |||||||||||||| |||||||||| |||    
T  3884 tcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgc 3785  T
Q  394 ttcatag 400  Q
    |||||||    
T  3784 ttcatag 3778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 3e-31; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 255 - 402
Target Start/End: Original strand, 22651962 - 22652108
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgt 354  Q
    ||||||||||  |||||||| |||||||||||       |||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||  |||    
T  22651962 gacactgacacgccgacacagctaataatttgaaaaaa-tcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgt 22652060  T
Q  355 ccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    ||||||| |||||||| ||||||| |||||||||| ||||||||||||    
T  22652061 ccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatagct 22652108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 255 - 402
Target Start/End: Complemental strand, 15816202 - 15816056
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgt 354  Q
    ||||||||||  ||||||||||||||||||||       |||||||||| |||||||||| |||||||| |||||||| | |||||||||||||||   |    
T  15816202 gacactgacacgccgacacaactaataatttgaaaaaa-tcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaat 15816104  T
Q  355 ccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    ||||||| |||||||||||||||| || ||||||| ||||||||||||    
T  15816103 ccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagct 15816056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 255 - 400
Target Start/End: Complemental strand, 29510377 - 29510233
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgt 354  Q
    ||||||||||  |||||||| |||||||||||       ||||| |||||||| ||||||||||||||| ||| |||||| ||||||||||||| | |||    
T  29510377 gacactgacacgccgacacagctaataatttgaaaaaa-tcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgtgt 29510279  T
Q  355 ccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||| ||||||| |||||||| |||||||||| ||||||||||    
T  29510278 ccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 294 - 402
Target Start/End: Original strand, 28745522 - 28745630
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||| ||||| ||||| |||||||||||||||| ||||||||||||||| |||||| ||| | |||| | ||||| |||||||||||| |||    
T  28745522 tcacataattcaatgtaactacaaatgtcgatgtcgtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgc 28745621  T
Q  394 ttcatagct 402  Q
    |||||||||    
T  28745622 ttcatagct 28745630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 294 - 399
Target Start/End: Complemental strand, 29447145 - 29447040
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||  |||| |||||  ||||||||||||||| |||||||||| |||    
T  29447145 tcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgc 29447046  T
Q  394 ttcata 399  Q
    ||||||    
T  29447045 ttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 4673454 - 4673354
Alignment:
Q  300 aattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||||||||||||||||| ||  |||| ||| | ||||||||||||| ||| |||||||| || |||||||||||||||||||||||  |||||||||    
T  4673454 aattcagtgtaattacaagtatcagtgtcttgttgatgtcggacacgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcata 4673355  T
Q  400 g 400  Q
    |    
T  4673354 g 4673354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 6065692 - 6065585
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||| |||| |||||||| |  || || |||||||  |||||||||||||||||||||||||| || |||||| |||| |||||||||||| |||    
T  6065692 tcacataatacagtataattacatgaatcaatatcgtgtcaatgtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgc 6065593  T
Q  394 ttcatagc 401  Q
    ||||||||    
T  6065592 ttcatagc 6065585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 34451072 - 34450961
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgt-----tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtc 388  Q
    ||||| ||| ||||||||||| | |||||| |||||||||||     ||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||    
T  34451072 tcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 34450973  T
Q  389 catgcttcatag 400  Q
    | ||||||||||    
T  34450972 cgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 11803283 - 11803389
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||| | |||| | ||| |||| | ||| ||| |||||||||||||||||| || ||||| ||||||| |||||||||| |||    
T  11803283 tcacataattcagtgtaattatatgtgttggtgttgtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgc 11803382  T
Q  394 ttcatag 400  Q
    |||||||    
T  11803383 ttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 298 - 402
Target Start/End: Original strand, 21465440 - 21465544
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttca 397  Q
    |||||||  ||||||||||||||| | |||||||||  ||||||||||||||| ||||| |||| |||| |||||||||   |||||||||| |||||||    
T  21465440 ataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttca 21465539  T
Q  398 tagct 402  Q
    |||||    
T  21465540 tagct 21465544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 2572091 - 2572016
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacac 369  Q
    |||||||||| ||||||||||||||||||| |||||||||  ||||||||||||||| ||||||| || |||||||    
T  2572091 tcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgtccgataccgggacac 2572016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 231 - 402
Target Start/End: Complemental strand, 36450851 - 36450692
Alignment:
Q  231 ctatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgt 330  Q
    ||||||||||||||||| ||||  ||||||||||  ||||||||||||||||||||       ||||| |||||||||||||||||||||| | |||||     
T  36450851 ctatgaagcacggatacggacacggacactgacacgccgacacaactaataatttgaaaaaa-tcacagaattcagtgtaattacaagtgtaggtgtcg- 36450754  T
Q  331 gtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
              |||||||| | ||||||||||  ||||||||||||||| |||||||||  ||||||||||||    
T  36450753 ----------gacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatagct 36450692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 8343340 - 8343446
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||| ||||||||||||||||||  ||||||     |||| |||||||||| |||||||||| |||||||||||||||| | |||||||  |||    
T  8343340 tcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgc 8343439  T
Q  394 ttcatag 400  Q
    |||||||    
T  8343440 ttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 26902210 - 26902104
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||| | |||||| |||||| |   ||||||||||||||| |||| | ||| ||||||||||| |||  |||||||||| |||    
T  26902210 tcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgtccgtgc 26902111  T
Q  394 ttcatag 400  Q
    |||||||    
T  26902110 ttcatag 26902104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 31557051 - 31557115
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||| |||||||||| ||||||    
T  31557051 tgtcagacacgacacatgtccgacaccaggacacgcctaatccaaggtgtgtccatgcctcatag 31557115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 18407767 - 18407838
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| || |||||||||||||||||||||||| |||||||||||||   |||||||||| ||||||||||    
T  18407767 gtgtcgctgccggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcatag 18407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 22197777 - 22197671
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtc-gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatg 392  Q
    |||||||||| ||||||||||||||||||  |||| ||||||| |||||||| ||||| |||||||||| ||  |||||||||||  |||||||||| ||    
T  22197777 tcacataatttagtgtaattacaagtgtcagtgtcagtgtcgt-gtcggacatgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtg 22197679  T
Q  393 cttcatag 400  Q
    ||| ||||    
T  22197678 ctttatag 22197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 329 - 403
Target Start/End: Complemental strand, 3951547 - 3951473
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagctt 403  Q
    |||||| |||| |||||||||| |||| ||||| || |||||||||||||||||||| ||| |||||||||||||    
T  3951547 gtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatagctt 3951473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 329 - 401
Target Start/End: Complemental strand, 33405395 - 33405323
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    |||||| |||||||||||||||||||| |||||  ||||||| ||||||||| |||||||| |||| ||||||    
T  33405395 gtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgctccatagc 33405323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 5813640 - 5813707
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttc 396  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||   |||||||||| ||||||    
T  5813640 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 3025606 - 3025668
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    ||||||||||||||| |||| ||||||| |||||| ||||||| |||||||||| ||||||||    
T  3025606 tgtcggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 11927121 - 11927015
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||| | |||||| |||||||| | ||||  ||||||||  | ||| |||  | |||||||||||||| | |||||||| |||    
T  11927121 tcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgacatgtatccaacatcgagacacgcctaatccgatgagtgtccgtgc 11927022  T
Q  394 ttcatag 400  Q
    |||||||    
T  11927021 ttcatag 11927015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 11944689 - 11944795
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||| |||||||||||| | |||||| |||||||| | ||||  ||||||||  | |||||||| | |||||||||||||| | |||||| | |||    
T  11944689 tcacataactcagtgtaattatatgtgtcggtgtcgtgttgatgtcatacacgacatgtatccgacaccgagacacgcctaatccgatgagtgttcgtgc 11944788  T
Q  394 ttcatag 400  Q
    |||||||    
T  11944789 ttcatag 11944795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 329 - 399
Target Start/End: Complemental strand, 43737822 - 43737752
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||| ||||||||||||||  |||| ||||| |||| |||||| ||||||||||||||| |||||||||    
T  43737822 gtgtcggtgtcggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 22943349 - 22943301
Alignment:
Q  340 ggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtc 388  Q
    ||||||||||| |||||||||| |||||||||||||||| |||||||||    
T  22943349 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 24362237 - 24362173
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgt-cggacacgacacatgtccg 357  Q
    ||||||||||||||||||||| | ||||| ||||||||||| ||| |||||||||||| ||||||    
T  24362237 tcacataattcagtgtaattatatgtgtcaatgtcgtgtcggtgtccggacacgacacgtgtccg 24362173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 377
Target Start/End: Complemental strand, 12570542 - 12570461
Alignment:
Q  295 cacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatc 377  Q
    ||||||||| |||||||||| | |||||||||| || ||| |||| ||||| |||| ||||||||||  ||||||||||||||    
T  12570542 cacataattaagtgtaattatatgtgtcgatgt-gtatcggtgtcagacactacacgtgtccgacaccaggacacgcctaatc 12570461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 400
Target Start/End: Original strand, 13397620 - 13397670
Alignment:
Q  350 catgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||| | |||||||||||| |||||||||||| ||||||||||    
T  13397620 catgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcatag 13397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 385
Target Start/End: Complemental strand, 14639787 - 14639745
Alignment:
Q  343 cacgacacatgtccgacactgggacacgcctaatccaaggagt 385  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  14639787 cacgacacatgtccgacaccgggacatgcctaatccaaggagt 14639745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 25566865 - 25566903
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgt 332  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  25566865 tcacataattcagtgtaattacaagtgtcggtgtcgtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 400
Target Start/End: Complemental strand, 27067322 - 27067231
Alignment:
Q  307 tgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||||  |||||||||| ||||||||||||||  ||||  |||| ||   ||| ||||||| |||||||||| ||||||||||    
T  27067322 tgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtgtcgaacaccgg--aacgtctaatccgaggagtgtccgtgcttcatag 27067231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 398
Target Start/End: Complemental strand, 15023268 - 15023199
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||| ||||||| ||||||| |||||||  |||| ||||| ||||||| ||||||||||||| |||||    
T  15023268 gtgtcgatgtcggatacgacacgtgtccgatgctggaacacgtctaatccgaggagtgtccatgattcat 15023199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 398
Target Start/End: Complemental strand, 20679406 - 20679337
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||| |||| ||| | |||| |||||||||| ||||||||||| | || |||||||||||||||||||    
T  20679406 gtgtcggtgtcagacgcaacacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgcttcat 20679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 8798841 - 8798793
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| || |||||||||||||||||||||||||  ||||||||    
T  8798841 tgtccgacaccggaacacgcctaatccaaggagtgtccagacttcatag 8798793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 400
Target Start/End: Complemental strand, 13436954 - 13436910
Alignment:
Q  356 cgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||    
T  13436954 cgacaccgggacacgcctaatccaaggagtgtctgtgcttcatag 13436910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 17751703 - 17751775
Alignment:
Q  329 gtgtcgttgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| |||||||||| ||| |||  ||||||| |||||||||||||||| ||||||||||  |||||||||    
T  17751703 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 17760690 - 17760762
Alignment:
Q  329 gtgtcgttgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| |||||||||| ||| |||  ||||||| |||||||||||||||| ||||||||||  |||||||||    
T  17760690 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17760762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 22204714 - 22204762
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||| |||||| |||||||||||||||| ||||||| ||||    
T  22204714 tgtccgacactgagacacgtctaatccaaggagtgttcatgctttatag 22204762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 24858036 - 24858136
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||| ||||||||||| |||||      ||||||||||||||  ||||| || | |||||||||||||||  ||||||||   |||    
T  24858036 tcacataattcagtgtaa-tacaagtgtcgttgtcg------tgtcggacacgacatgtgtcccacgccgggacacgcctaatcagaggagtgtttgtgc 24858128  T
Q  394 ttcatagc 401  Q
    ||||||||    
T  24858129 ttcatagc 24858136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 30068016 - 30067968
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  30068016 tgtccgacactgggacacacctaatccgatgagtgtccgtgcttcatag 30067968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 34127208 - 34127168
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcatagcttg 404  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  34127208 ggacacacctaatccaaggagtgtccgtgcttcatagcttg 34127168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 40332239 - 40332299
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtcc 389  Q
    |||||| ||| ||||||||||| ||||| |||| ||||| |||||||||| ||||||||||    
T  40332239 gtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtcc 40332299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 41831975 - 41831874
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||| |||||||||||      ||| | |||||||||||| || | |||||||   ||||||| ||||| | |||||||||||| |    
T  41831975 tcacataattcagtgtaactacaagtgtcg------tgttggtgtcggacacgatacgtatccgacaacaggacacgtctaattcgaggagtgtccattc 41831882  T
Q  394 ttcatagc 401  Q
    ||||||||    
T  41831881 ttcatagc 41831874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 398
Target Start/End: Original strand, 44067542 - 44067644
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcg-tgtcgttgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||| ||||||||||| |||||||| ||||| |||||| ||||||||| ||  | ||||||||||  ||||||||||||| | |||||||||| |||    
T  44067542 acataatacagtgtaattataagtgtcg-tgtcggtgtcgt-gtcggacactgatgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgc 44067639  T
Q  394 ttcat 398  Q
    |||||    
T  44067640 ttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 329
Target Start/End: Original strand, 4948676 - 4948711
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcg 329  Q
    |||||||||||||||||||||||||||||| |||||    
T  4948676 tcacataattcagtgtaattacaagtgtcggtgtcg 4948711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 403
Target Start/End: Original strand, 9383049 - 9383088
Alignment:
Q  364 ggacacgcctaatccaaggagtgtccatgcttcatagctt 403  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  9383049 ggacacgcctaatccaagcagtgtccgtgcttcatagctt 9383088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 399
Target Start/End: Complemental strand, 13009469 - 13009423
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||||||| |||||||||||||||||||||| |||| |||||||||    
T  13009469 tgtccgacac-gggacacgcctaatccaaggagcgtccgtgcttcata 13009423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 14134760 - 14134827
Alignment:
Q  342 acacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagcttgtaggt 409  Q
    ||||||||| |||||| |||  ||||||||||||| | |||||||||| || |||||||||| |||||    
T  14134760 acacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcatagcttataggt 14134827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 298 - 329
Target Start/End: Complemental strand, 15023288 - 15023257
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcg 329  Q
    ||||||||||||||||||||||||||||||||    
T  15023288 ataattcagtgtaattacaagtgtcgatgtcg 15023257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 39820483 - 39820549
Alignment:
Q  336 tgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    |||||||||| ||| | |||||||||| |||||||||||||||| || ||||||| ||||||||||||    
T  39820483 tgtcggacaccgacgcgtgtccgacac-gggacacgcctaatccgagaagtgtccgtgcttcatagct 39820549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 384
Target Start/End: Complemental strand, 44462206 - 44462151
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggag 384  Q
    |||||| |||| ||||||| ||||||||||||| |||||||| ||||||| |||||    
T  44462206 gtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44462151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 384
Target Start/End: Complemental strand, 44469739 - 44469684
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggag 384  Q
    |||||| |||| ||||||| ||||||||||||| |||||||| ||||||| |||||    
T  44469739 gtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44469684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 400
Target Start/End: Original strand, 13403175 - 13403225
Alignment:
Q  350 catgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||| | ||||||| |||| |||||||||||| ||||||||||    
T  13403175 catgtccgacaccgagacacgcttaattcaaggagtgtccgtgcttcatag 13403225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 18964201 - 18964310
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgt--cgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccat 391  Q
    |||||||||||| |||||||| | |||||| |||  |||||||  || | ||||||||| ||||  |||| | ||||||||| |||| |||||||||  |    
T  18964201 tcacataattcaatgtaattatatgtgtcggtgtgtcgtgtcggcgttgaacacgacacctgtctaacacggagacacgccttatccgaggagtgtctgt 18964300  T
Q  392 gcttcatagc 401  Q
    ||||||||||    
T  18964301 gcttcatagc 18964310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 329 - 399
Target Start/End: Complemental strand, 24205819 - 24205749
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||| ||||| |||| || |||||| ||||| || ||||||||||||| |||||||||| || ||||||    
T  24205819 gtgtcggtgtcgaacacaacgcatgtctgacaccggaacacgcctaatccgaggagtgtccgtgtttcata 24205749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 395
Target Start/End: Complemental strand, 31109501 - 31109463
Alignment:
Q  357 gacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  31109501 gacactgggacacgcctaatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 126351 - 126298
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtcc 389  Q
    ||||||||||||||| ||||| | || |||||||| ||||||| ||||||||||    
T  126351 tgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagtgtcc 126298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 329
Target Start/End: Original strand, 24669459 - 24669492
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcg 329  Q
    |||||||||||||||||||||||||||| |||||    
T  24669459 acataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 28385026 - 28384937
Alignment:
Q  297 cataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacg-acacatgtccgacactgggacacgcctaatccaaggagt 385  Q
    |||||||||||||||||| | |||||| |||| ||||  |||| |||||| ||||||||| ||  |  ||| ||||||||||||||||||    
T  28385026 cataattcagtgtaattatatgtgtcggtgtcatgtcagtgtcagacacgtacacatgtctgatgccaggatacgcctaatccaaggagt 28384937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 323
Target Start/End: Original strand, 40332215 - 40332244
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcg 323  Q
    ||||||||||||||||||||||||||||||    
T  40332215 tcacataattcagtgtaattacaagtgtcg 40332244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 7253627 - 7253691
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||| |||| ||||| |||||| || |||||||| || |||||||||||  ||||||||||    
T  7253627 tgtcggacgcgactcatgttcgacaccggaacacgccttattcaaggagtgtctttgcttcatag 7253691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 8342996 - 8343032
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgt 330  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  8342996 tcacataatttagtgtaattacaagtgtcggtgtcgt 8343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 8343038 - 8343086
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| |||||||||||||||| | |||||||  ||||||||||    
T  8343038 tgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 16641973 - 16641909
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||  ||||  |||| ||||||| |||||||| |||||||||  ||||||||||    
T  16641973 tgtcggacacgacatgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttcatag 16641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 373
Target Start/End: Complemental strand, 26915250 - 26915202
Alignment:
Q  325 tgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcct 373  Q
    |||||||||| |||||||||||| || |||| |||| ||||||||||||    
T  26915250 tgtcgtgtcggtgtcggacacgatacgtgtcagacattgggacacgcct 26915202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 322
Target Start/End: Complemental strand, 30077422 - 30077394
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtc 322  Q
    |||||||||||||||||||||||||||||    
T  30077422 tcacataattcagtgtaattacaagtgtc 30077394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 401
Target Start/End: Original strand, 31514938 - 31514974
Alignment:
Q  365 gacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    |||||||||||||| |||||||||| |||||||||||    
T  31514938 gacacgcctaatccgaggagtgtccgtgcttcatagc 31514974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 33389343 - 33389295
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||| || ||||||||||| ||||||  ||||||||||    
T  33389343 tgtccgacactgggatacacctaatccaagaagtgtcggtgcttcatag 33389295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 3e-31; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 249 - 400
Target Start/End: Original strand, 19482648 - 19482798
Alignment:
Q  249 gacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgac 348  Q
    |||| |||||||||||  ||||||||||||||||||||       ||||||||||| |||||||||||||||| | |||||||||| | | |||||||||    
T  19482648 gacacagacactgacacgccgacacaactaataatttgaaaata-tcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacgac 19482746  T
Q  349 acatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    || |||||||||||||||||| |||||||| |||||||| | ||||||||||    
T  19482747 acgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 19482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 294 - 399
Target Start/End: Complemental strand, 30982913 - 30982808
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||| ||||||||||||| |||||||| |||||||||| |||| |||||||||| |||||||||| |||||||||||||||||| |||||||| |||    
T  30982913 tcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgc 30982814  T
Q  394 ttcata 399  Q
    ||||||    
T  30982813 ttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 28964252 - 28964188
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  28964252 tgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 24613736 - 24613630
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||| ||||| ||||||||||| |||| ||||| |||| |||||||||| |||| |||||  ||||||| ||||||| |||||||||| |||    
T  24613736 tcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgc 24613637  T
Q  394 ttcatag 400  Q
    |||||||    
T  24613636 ttcatag 24613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 16073442 - 16073513
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| |||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||||||||||    
T  16073442 gtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcatag 16073513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 23292997 - 23292926
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||| |||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  23292997 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 715642 - 715545
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||||||| | |||| |||         |||||||||||||||||||| |||||||||||||||| |||||||||| |||    
T  715642 tcacataattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgc 715552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 752968 - 752871
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||||||| | |||| |||         |||||||||||||||||||| |||||||||||||||| |||||||||| |||    
T  752968 tcacataattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgc 752878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 5414207 - 5414101
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| ||| ||||||||||| | || ||| |||||||||  ||||||||||||||| |||| ||||| ||||||| ||| ||||||||||||||| |||    
T  5414207 tcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgc 5414108  T
Q  394 ttcatag 400  Q
    |||||||    
T  5414107 ttcatag 5414101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 296 - 373
Target Start/End: Original strand, 37496730 - 37496807
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcct 373  Q
    |||||||||| |||||| |||||||||| ||| ||||||||| ||||||||||||||||| ||||| |||||||||||    
T  37496730 acataattcaatgtaatcacaagtgtcggtgttgtgtcgttgccggacacgacacatgtcggacaccgggacacgcct 37496807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 294 - 398
Target Start/End: Original strand, 19312359 - 19312463
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||| |||||||||||||| |||| ||| |||||||||||||||||| ||||||| |||||||||| | |||||| ||||||  || ||||||| ||     
T  19312359 tcacatgattcagtgtaattataagtatcggtgtcgtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatctgagaagtgtccgtgt 19312458  T
Q  394 ttcat 398  Q
    |||||    
T  19312459 ttcat 19312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 340 - 400
Target Start/End: Original strand, 29205527 - 29205587
Alignment:
Q  340 ggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  29205527 ggacacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 296 - 399
Target Start/End: Original strand, 847977 - 848080
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||||||||| | ||||||||||||||| |||| ||| | |||||||||||| || ||||  |||| ||||||| ||||||||||||||||||| || ||    
T  847977 acataattcactataattacaagtgtcggtgtcttgttggtgtcggacacgaaacgtgtcgaacaccgggacacacctaatccaaggagtgtccgtgttt 848076  T
Q  396 cata 399  Q
    ||||    
T  848077 cata 848080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 3947798 - 3947702
Alignment:
Q  297 cataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttc 396  Q
    ||||||||||||||||||||||||||  ||||||||||      |||||||||| ||||||||||  |||||| |||||||| |||||||||| ||||||    
T  3947798 cataattcagtgtaattacaagtgtcagtgtcgtgtcg------gacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttc 3947705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 22234925 - 22234819
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||  | |||||| |||||||||| |||| |||||||||| ||||||||||  ||||||  ||||||| || ||||| | |||    
T  22234925 tcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgc 22234826  T
Q  394 ttcatag 400  Q
    |||||||    
T  22234825 ttcatag 22234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 47264010 - 47264116
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||| |||||||||||| |||||||||| ||| | |||| || |||||||||||| |||||  ||||||||||||||| | ||| |||  |||    
T  47264010 tcacataattctgtgtaattacaaatgtcgatgtcatgttggtgtcagatacgacacatgtctgacaccaggacacgcctaatccgaagagcgtctgtgc 47264109  T
Q  394 ttcatag 400  Q
    |||||||    
T  47264110 ttcatag 47264116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 294 - 397
Target Start/End: Original strand, 28084546 - 28084640
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||| ||||||||||||||||  |||||||||| ||         |||| ||||||||||||||||||||||||||| |||||||||| |||    
T  28084546 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcggtg---------acacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgc 28084636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 49431074 - 49431145
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||| ||||| |||| ||||||||||| |||| |||||||||||||||| ||||    
T  49431074 gtgtcggtgtcggacacgacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctttatag 49431145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 903946 - 904052
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||| | || ||  | |||| ||| ||| ||||||||||  ||||||||||||||||||  |||||||||| | ||||| |||    
T  903946 tcacataattcagtgtaattatatgtatcagtatcgtatcggtgttggacacgacatgtgtccgacactgggacacatctaatccaagaaatgtccttgc 904045  T
Q  394 ttcatag 400  Q
    |||||||    
T  904046 ttcatag 904052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 3064926 - 3064868
Alignment:
Q  342 acacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||| ||||||||||    
T  3064926 acacgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcatag 3064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 46084026 - 46083920
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||  |||||||||| | |||||| |||||||||  | ||||||||||||| |||| ||| | ||||||||||| ||   ||||||||||||||    
T  46084026 tcacataatctagtgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtgtctgacgcggggacacgccttataagaggagtgtccatgc 46083927  T
Q  394 ttcatag 400  Q
    |||||||    
T  46083926 ttcatag 46083920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 329 - 398
Target Start/End: Original strand, 4157484 - 4157553
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||| |||||||||||||||||||||||||| | || ||||||||| | ||||||||| |||||||||    
T  4157484 gtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcat 4157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 331
Target Start/End: Original strand, 30298910 - 30299008
Alignment:
Q  233 atgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtg 331  Q
    ||||||||| ||||| ||||  ||||||||||  |||||||| |||||||||||       | |||||||||||||||||||||||||||| |||||||    
T  30298910 atgaagcacagatacggacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30299008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 331
Target Start/End: Original strand, 30327778 - 30327876
Alignment:
Q  233 atgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtg 331  Q
    ||||||||| ||||| ||||  ||||||||||  |||||||| |||||||||||       | |||||||||||||||||||||||||||| |||||||    
T  30327778 atgaagcacagatacggacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30327876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 298 - 395
Target Start/End: Original strand, 30838238 - 30838335
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||||| |||||||||| |||| ||| |||||||||  |||||||| |||||| ||||||||||   ||||||||||| || |||||||||| |||||    
T  30838238 ataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 294 - 387
Target Start/End: Complemental strand, 38148760 - 38148667
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgt 387  Q
    ||||||||||||||||||||  || |||||||||||||| | ||| ||||||||||| | || |||||||| ||||||||| || ||| |||||    
T  38148760 tcacataattcagtgtaattttaaatgtcgatgtcgtgttggtgttggacacgacacgtatctgacactggaacacgcctattcgaagaagtgt 38148667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 11931304 - 11931410
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtccatg 392  Q
    |||||||||| ||||||| || | ||||||||||| ||||| | ||| |||| ||| ||||||||||||  |||||| ||||||||| ||||||||| ||    
T  11931304 tcacataatttagtgtaaatatatgtgtcgatgtcatgtcggtatcg-acaccgacgcatgtccgacaccaggacacacctaatccatggagtgtccgtg 11931402  T
Q  393 cttcatag 400  Q
    ||||||||    
T  11931403 cttcatag 11931410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 410
Target Start/End: Complemental strand, 19500892 - 19500777
Alignment:
Q  295 cacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgct 394  Q
    |||||| || |||||||||| | |||  | |||||||||| |||||||||||||||   || || || | | ||||||||||||||||||| ||| ||||    
T  19500892 cacatattttagtgtaattatatgtgatggtgtcgtgtcggtgtcggacacgacacgcctctgataccgaggcacgcctaatccaaggagtatccgtgct 19500793  T
Q  395 tcatagcttgtaggta 410  Q
    |||||| |||||||||    
T  19500792 tcataggttgtaggta 19500777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 21945551 - 21945618
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttc 396  Q
    |||||| ||||||||| |||||||||||||||| |  ||||||||||||| ||||||||| |||||||    
T  21945551 gtgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccgaggagtgtctatgcttc 21945618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 27706212 - 27706129
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatc 377  Q
    |||||||||| |||||||||||||||||   ||||||||   ||||||||||||||| | ||||| || |||||||||||||||    
T  27706212 tcacataatttagtgtaattacaagtgtgagtgtcgtgttaatgtcggacacgacacgtatccgataccgggacacgcctaatc 27706129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 12708175 - 12708221
Alignment:
Q  298 ataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggaca 344  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||    
T  12708175 ataattcagtgtaattacaagtgtcgatgtcgtgtctatgtcggaca 12708221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 401
Target Start/End: Complemental strand, 12895285 - 12895213
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    |||||| ||||||||||||||  | |||||||  |||||||||||||||| |||||||| | |||||||||||    
T  12895285 gtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatagc 12895213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 14465069 - 14465006
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||| |||||||||| ||| ||||||||||||||| ||||||  |||||||||| |||||||||    
T  14465069 tgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 325 - 400
Target Start/End: Original strand, 16184875 - 16184950
Alignment:
Q  325 tgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| ||||| | ||||  | ||||||||||||||||||||||||||| ||||||||   ||||||||||    
T  16184875 tgtcgtgtcggtgtcgcatacgatgcctgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcatag 16184950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 34306815 - 34306744
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||| |||||||||| | |||||||||||||  |||| ||| | ||||||||||    
T  34306815 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 35157996 - 35157925
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| |||| |||||||||||||||| |||| || |||||| |||||| || ||||||| ||||||||||    
T  35157996 gtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 400
Target Start/End: Complemental strand, 8423728 - 8423658
Alignment:
Q  330 tgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||| ||||||||||||||  |||||||||| |||||||||||||||  || ||||||| ||| ||||||    
T  8423728 tgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcatag 8423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 11596387 - 11596337
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggaca 344  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||| ||||    
T  11596387 tcacataattcagtgtaattacaagtgtaggtgtcgtgtcattgtccgaca 11596337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 398
Target Start/End: Complemental strand, 22440605 - 22440559
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  22440605 tgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 36635348 - 36635449
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||| | ||||     ||||||   |||| ||||||||||  ||| ||||| |||||||||||||||| | |||||||| |||    
T  36635348 tcacataattcagtgtaattatatgtgt-----tcgtgtgagtgtcagacacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgc 36635442  T
Q  394 ttcatag 400  Q
    |||||||    
T  36635443 ttcatag 36635449  T

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Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 398
Target Start/End: Original strand, 4157197 - 4157266
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||| |||||||||||||||||||||||||| | || || |||||| | |||||||||  ||||||||    
T  4157197 gtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 599 - 648
Target Start/End: Complemental strand, 13548262 - 13548213
Alignment:
Q  599 catcctttcaagcactataccattttccattaaatatttagctaagaaaa 648  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||| ||||    
T  13548262 catcctttcaagcattattccattttccatgaaatatttagctaaaaaaa 13548213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 400
Target Start/End: Original strand, 18966567 - 18966628
Alignment:
Q  339 cggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||| |||| |||||||||  |||| |||||||||| ||||||||||| ||||||||||    
T  18966567 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcatag 18966628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 4383391 - 4383447
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacac 350  Q
    |||||||||||||||||||||||| ||||  |||||||||| ||||  |||||||||    
T  4383391 tcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtcaaacacgacac 4383447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 400
Target Start/End: Complemental strand, 5225646 - 5225542
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgctt 395  Q
    |||||||||| || ||| | | |||||| |||||||| | |||||||||||| |||| || ||| | ||||||||||||||| | ||||| ||  |||||    
T  5225646 acataattcaatgcaataatatgtgtcggtgtcgtgttggtgtcggacacgatacatatcggaccccgggacacgcctaatctatggagtatctgtgctt 5225547  T
Q  396 catag 400  Q
    |||||    
T  5225546 catag 5225542  T

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Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 398
Target Start/End: Original strand, 7424742 - 7424774
Alignment:
Q  366 acacgcctaatccaaggagtgtccatgcttcat 398  Q
    |||||||||||||||||||||||||||||||||    
T  7424742 acacgcctaatccaaggagtgtccatgcttcat 7424774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 491 - 559
Target Start/End: Original strand, 11358116 - 11358184
Alignment:
Q  491 aaattcaagtatggcaaaagagactcctttcttaaatgagtacaacttctccttgaattcttcaatgac 559  Q
    ||||||||||||| || |||||||| |||||||| |  |||||| ||||||||| |||||||| |||||    
T  11358116 aaattcaagtatgacagaagagacttctttcttagacaagtacagcttctccttaaattcttcgatgac 11358184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 325 - 404
Target Start/End: Complemental strand, 20521861 - 20521781
Alignment:
Q  325 tgtcgtgtcgttgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagcttg 404  Q
    |||||||||| |||||||||| ||| ||||||||| ||   ||||||||||||||||||||  |||  |||||||||||||    
T  20521861 tgtcgtgtcggtgtcggacaccgacgcatgtccgaaaccatgacacgcctaatccaaggagaatccgagcttcatagcttg 20521781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 325 - 400
Target Start/End: Original strand, 24343556 - 24343632
Alignment:
Q  325 tgtcgtgtcgttgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||| |||| ||||| ||| | |||||||||| |||||||||||| ||  |||||||||| ||||||||||    
T  24343556 tgtcgtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 399
Target Start/End: Complemental strand, 5922579 - 5922532
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    ||||||||||||||||||||||||||  |||||||||  |||||||||    
T  5922579 tgtccgacactgggacacgcctaatctgaggagtgtctctgcttcata 5922532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 329
Target Start/End: Complemental strand, 12797373 - 12797338
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcg 329  Q
    |||||||||||||||||||||||||||||| |||||    
T  12797373 tcacataattcagtgtaattacaagtgtcggtgtcg 12797338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 12895151 - 12895054
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||  |||||||||||||||| |||||      |||||||||||||||    ||||||| |||| ||||||||| | | |||||||| |||    
T  12895151 tcacataattcaaagtaattacaagtgtcggtgtcg------tgtcggacacgacac----ccgacaccgggatacgcctaattcgaagagtgtccgtgc 12895062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 29205408 - 29205497
Alignment:
Q  231 ctatgaagcacggatacagacatagacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcg 323  Q
    ||||||||||||||||| ||||| ||||| ||||  || ||||  |||||||||||       ||||||||||||||||||||||||||||||    
T  29205408 ctatgaagcacggatacggacatggacacggaca--ccaacacggctaataatttgaaaaaa-tcacataattcagtgtaattacaagtgtcg 29205497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 400
Target Start/End: Complemental strand, 32273524 - 32273461
Alignment:
Q  337 gtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||| | ||||| || |||||||| | |||||||||||||||  ||||||||||    
T  32273524 gtcggacacgacacgtatccgatacggggacacgacaaatccaaggagtgtcggtgcttcatag 32273461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 400
Target Start/End: Original strand, 35161092 - 35161155
Alignment:
Q  337 gtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||| |||||||||| || |||| |||||||| |  ||||||| ||||||||||    
T  35161092 gtcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcatag 35161155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 329
Target Start/End: Original strand, 42640553 - 42640588
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcg 329  Q
    |||||||||||||||||||||||||||||| |||||    
T  42640553 tcacataattcagtgtaattacaagtgtcggtgtcg 42640588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 387
Target Start/End: Complemental strand, 21873406 - 21873315
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgt 387  Q
    ||||||||||||||| |||||   ||| || | |||||| | | ||||||  ||||| |||||||||| |||||||| ||||||||||||||||    
T  21873406 tcacataattcagtgaaattat--gtgccggtatcgtgttggtctcggacgtgacacgtgtccgacaccgggacacgtctaatccaaggagtgt 21873315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 387
Target Start/End: Complemental strand, 21929267 - 21929176
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgt 387  Q
    ||||||||||||||| |||||   ||| || | |||||| | | ||||||  ||||| |||||||||| |||||||| ||||||||||||||||    
T  21929267 tcacataattcagtgaaattat--gtgccggtatcgtgttggtctcggacgtgacacgtgtccgacaccgggacacgtctaatccaaggagtgt 21929176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 51701284 - 51701338
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacac 350  Q
    |||||||| |||||||||||||||||   |||||||||| ||||| |||||||||    
T  51701284 acataattgagtgtaattacaagtgttagtgtcgtgtcggtgtcgaacacgacac 51701338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 400
Target Start/End: Complemental strand, 5775341 - 5775304
Alignment:
Q  363 gggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  5775341 gggacacgcctaatccgaggagtgtccgtgcttcatag 5775304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 402
Target Start/End: Original strand, 7970584 - 7970621
Alignment:
Q  365 gacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  7970584 gacacgcctaatccaagaagtgtccttgcttcatagct 7970621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 29205492 - 29205533
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacg 370  Q
    |||||| ||| |||||||||||||||||||||| ||||||||    
T  29205492 gtgtcggtgttggacacgacacatgtccgacaccgggacacg 29205533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 11596345 - 11596297
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||  |||||||||||||||  |||||||||| ||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 13134474 - 13134514
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcg 334  Q
    |||||||||| |||||||||| | |||||||||||||||||    
T  13134474 tcacataatttagtgtaattatatgtgtcgatgtcgtgtcg 13134514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 17876237 - 17876285
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||  |||||| ||||||||||||||||||  ||||||||||    
T  17876237 tgtccgacaccaggacacacctaatccaaggagtgtctgtgcttcatag 17876285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 18513223 - 18513175
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||  ||||||||||||||  |||||||||| ||||||||||    
T  18513223 tgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 322
Target Start/End: Complemental strand, 28964283 - 28964255
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtc 322  Q
    |||||||||||||||||||||||||||||    
T  28964283 tcacataattcagtgtaattacaagtgtc 28964255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 53490784 - 53490732
Alignment:
Q  309 taattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacac 361  Q
    ||||||||||||||  | |||||||| |||||||||||||| |||||| ||||    
T  53490784 taattacaagtgtcagtatcgtgtcggtgtcggacacgacaaatgtccaacac 53490732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 255 - 400
Target Start/End: Original strand, 241580 - 241724
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgt 354  Q
    ||||||||||  |||||||| |||||||||||       |||||||||| ||||||||||  ||||||| |||||||| | ||||||||||||||| |||    
T  241580 gacactgacacgccgacacagctaataatttggaaaaa-tcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgt 241678  T
Q  355 ccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||| |||||||||||||||| || ||||||| ||||||||||    
T  241679 ccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 256 - 400
Target Start/End: Complemental strand, 8707 - 8564
Alignment:
Q  256 acactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtc 355  Q
    |||||||||  ||||||||||||||||||||       ||||||||||| || ||||||||| ||||| |||||||||| | |||||||||| || ||||    
T  8707 acactgacatgccgacacaactaataatttgaaaata-tcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgtc 8609  T
Q  356 cgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||| ||||||||||| | |||||||||| ||||||||||    
T  8608 cgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 71749 - 71855
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| |||||||||||||||| ||||||  |||||||||| |||||||||| |||| |||||||||| |||||||| ||||||| |||||||||  |||    
T  71749 tcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgc 71848  T
Q  394 ttcatag 400  Q
    |||||||    
T  71849 ttcatag 71855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 53204 - 53299
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtcc 389  Q
    ||||||||||||||||||||| |||||||| || ||||||| ||||||||| ||||| |||||||||| ||||||||  ||||||||| |||||||    
T  53204 tcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtcc 53299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 255 - 398
Target Start/End: Original strand, 13386 - 13523
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgt 354  Q
    ||||||||||  ||||||||||||||||||||       ||||||||||||||| ||||||||| ||||     |||||| |||||||||||||||  ||    
T  13386 gacactgacacgccgacacaactaataatttgagaaaa-tcacataattcagtgcaattacaagggtcg-----gtgtcggtgtcggacacgacacgcgt 13479  T
Q  355 ccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    | |||||| |||||| ||||||||||||||||||| ||||||||    
T  13480 ctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

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Target: scaffold0152 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 255 - 398
Target Start/End: Complemental strand, 21941 - 21804
Alignment:
Q  255 gacactgacaaaccgacacaactaataatttgnnnnnnntcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgt 354  Q
    ||||||||||  ||||||||||||||||||||       ||||||||||||||| ||||||||| ||||     |||||| |||||||||||||||  ||    
T  21941 gacactgacacgccgacacaactaataatttgagaaaa-tcacataattcagtgcaattacaagggtcg-----gtgtcggtgtcggacacgacacgcgt 21848  T
Q  355 ccgacactgggacacgcctaatccaaggagtgtccatgcttcat 398  Q
    | |||||| |||||| ||||||||||||||||||| ||||||||    
T  21847 ctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 2952 - 3059
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||| ||||||||||||||| ||  |||||||||| | || |||||||||| ||| |||||| || ||||||||||||| |||||||||| |||    
T  2952 tcacataatttagtgtaattacaagtatcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgc 3051  T
Q  394 ttcatagc 401  Q
    | ||||||    
T  3052 tccatagc 3059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 4918 - 4821
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||||||||||||||||||||||||||| | |||| |||         |||||||||||||||||||| |||||||||||||||| |||||||||| |||    
T  4918 tcacataattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgc 4828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 398
Target Start/End: Complemental strand, 263406 - 263303
Alignment:
Q  295 cacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgct 394  Q
    |||||||||||||||||||| |||||||  |||||||||| |||| |||||||||| ||| ||| ||   |||||||||||||| |||||||||| || |    
T  263406 cacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggt 263307  T
Q  395 tcat 398  Q
    ||||    
T  263306 tcat 263303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 8662 - 8720
Alignment:
Q  342 acacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  8662 acacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 8720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 23535 - 23641
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||||||||||||||||| |||||||  |||||| ||| |||||||||||| |  ||||||| |||||||||||| |||||| || |||||   |||    
T  23535 tcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacgatatgtgtccgagactgggacacgcataatcccagaagtgtttgtgc 23634  T
Q  394 ttcatag 400  Q
    |||||||    
T  23635 ttcatag 23641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 23444 - 23484
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcg 334  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  23444 tcacataattcagtgtaattataagtgtcggtgtcgtgtcg 23484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 296 - 399
Target Start/End: Original strand, 92833 - 92940
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttg----tcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccat 391  Q
    |||||||||||||||||||||||||||  | | |||| | ||    |||||||||||||||||| |||||  ||||||||||||||| |||||||||| |    
T  92833 acataattcagtgtaattacaagtgtcagttttgtgttggtgggtgtcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgt 92932  T
Q  392 gcttcata 399  Q
    ||||||||    
T  92933 gcttcata 92940  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 328
Target Start/End: Original strand, 123652 - 123686
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtc 328  Q
    |||||||||||||||||||||||||||||| ||||    
T  123652 tcacataattcagtgtaattacaagtgtcggtgtc 123686  T

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Target: scaffold0623 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 294 - 399
Target Start/End: Complemental strand, 6031 - 5926
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||| ||| ||||||||||| | |||||| |||||| ||| ||||| ||||||||| |||| ||||| | ||||||||| ||||||||||||||| |||    
T  6031 tcacaaaatgcagtgtaattatatgtgtcggtgtcgtatcggtgtcgaacacgacacgtgtctgacacagagacacgccttatccaaggagtgtccgtgc 5932  T
Q  394 ttcata 399  Q
     |||||    
T  5931 ctcata 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 9782 - 9678
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    |||| |||||||||||||||| | |||||| |||||||| | |||| |||||||||| |||| ||||  ||||||||  |||||| |||||||||| |||    
T  9782 tcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgc 9683  T
Q  394 ttcat 398  Q
    |||||    
T  9682 ttcat 9678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 329 - 399
Target Start/End: Complemental strand, 473 - 403
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    |||||| ||||||||||||| | |||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  473 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 329 - 403
Target Start/End: Complemental strand, 5047 - 4973
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagctt 403  Q
    |||||| ||||||||||||||| ||||||||| || |||| ||||||||| |||||||||  |||||||||||||    
T  5047 gtgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatagctt 4973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 294 - 368
Target Start/End: Complemental strand, 44560 - 44486
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggaca 368  Q
    ||||||||||||||||||||| | |||||| | |||||||| ||| |||||| |||| |||||||||||||||||    
T  44560 tcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgtccgacactgggaca 44486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 14582 - 14646
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||||||||| |||||||||| | ||||||||||||| ||||||||| | ||||||||||    
T  14582 tgtcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcatag 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 8846 - 8917
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||| |||||||||| | |||||||||||||  |||||| ||| ||||||||||    
T  8846 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatag 8917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 297 - 400
Target Start/End: Original strand, 24052 - 24155
Alignment:
Q  297 cataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgt--ccgacactgggacacgcctaatccaaggagtgtccatgct 394  Q
    ||||||| |||||||||||| || ||  |||||||||| |||||||||| |||| |||  |||||||||| ||||||||||||| | |||||||| ||||    
T  24052 cataatttagtgtaattaca-gtttcagtgtcgtgtcggtgtcggacacaacacgtgtgtccgacactgg-acacgcctaatccgatgagtgtccgtgct 24149  T
Q  395 tcatag 400  Q
    ||||||    
T  24150 tcatag 24155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 399
Target Start/End: Original strand, 8690 - 8795
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgc 393  Q
    ||||||| |||||| |||||| |||||||| |||||||||  |||| |||  || || ||||||| |||  ||||||||| |||| || |||||||||||    
T  8690 tcacatagttcagtataattataagtgtcggtgtcgtgtctatgtcagacgtgatacgtgtccgatactaagacacgccttatccgagaagtgtccatgc 8789  T
Q  394 ttcata 399  Q
    ||||||    
T  8790 ttcata 8795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 3363 - 3427
Alignment:
Q  336 tgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    ||||||||| ||||| ||   |||||||||||||||||||||| |||||||||| ||||||||||    
T  3363 tgtcggacaagacacgtggtggacactgggacacgcctaatccgaggagtgtccgtgcttcatag 3427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 310 - 401
Target Start/End: Original strand, 13453 - 13544
Alignment:
Q  310 aattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagc 401  Q
    ||||||| ||||||  ||||||||| ||||||||||||||| | | |||||  |||| || |||||||| |||||||||| | |||||||||    
T  13453 aattacatgtgtcggggtcgtgtcggtgtcggacacgacacgtatacgacatcgggatacacctaatccgaggagtgtccgtacttcatagc 13544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 23794 - 23832
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgt 332  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  23794 tcacataattcagtgtaattacaagtgtcggtgtcgtgt 23832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 1692 - 1733
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacg 370  Q
    |||||| ||||||||||||||||||||||||||| |||||||    
T  1692 gtgtcggtgtcggacacgacacatgtccgacactaggacacg 1733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 70326 - 70399
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatagct 402  Q
    |||||| ||||||||||||||| ||||||||||  ||||| ||||||||| | |||||| | ||||||| ||||    
T  70326 gtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttcaaagct 70399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 20196 - 20236
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcg 334  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  20196 tcacataattcagtgtaattacaagtgtcagtgtcgtgtcg 20236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 17903 - 17840
Alignment:
Q  306 gtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacatgtccgacactgggacac 369  Q
    ||||||||| | ||| || |||||| ||| ||| ||||||||||| ||||||||||||||||||    
T  17903 gtgtaattatatgtgacggtgtcgtatcggtgttggacacgacacgtgtccgacactgggacac 17840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 51894 - 51941
Alignment:
Q  352 tgtccgacactgggacacgcctaatccaaggagtgtccatgcttcata 399  Q
    ||||| |||| |||||||||||||||| |||| |||||||||||||||    
T  51894 tgtccaacaccgggacacgcctaatccgaggaatgtccatgcttcata 51941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 45541 - 45470
Alignment:
Q  329 gtgtcgttgtcggacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||| ||||||||||||||| |||| ||||| | |||| ||||||||||| || ||| | ||||||||||    
T  45541 gtgtcggtgtcggacacgacacgtgtctgacaccgcgacatgcctaatccaaagattgtacgtgcttcatag 45470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 329
Target Start/End: Complemental strand, 45563 - 45530
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcg 329  Q
    |||||||||||||||||||||||||||| |||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcg 45530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 341 - 400
Target Start/End: Complemental strand, 3037 - 2978
Alignment:
Q  341 gacacgacacatgtccgacactgggacacgcctaatccaaggagtgtccatgcttcatag 400  Q
    |||||||||||||||||||||||  |||||||||||    ||||||||| ||||||||||    
T  3037 gacacgacacatgtccgacactgaaacacgcctaatatggggagtgtccgtgcttcatag 2978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 323
Target Start/End: Original strand, 130506 - 130535
Alignment:
Q  294 tcacataattcagtgtaattacaagtgtcg 323  Q
    ||||||||||||||||||||||||||||||    
T  130506 tcacataattcagtgtaattacaagtgtcg 130535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 296 - 403
Target Start/End: Complemental strand, 225301 - 225194
Alignment:
Q  296 acataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacac-gacacatgtccgacactgggacacgcctaatccaaggagtgtccatgct 394  Q
    ||||||| || |||||||| ||||||||   | ||||||| ||||||||| ||| | ||| ||||||  ||||||||||||| | |||||||||| ||||    
T  225301 acataatacaatgtaattataagtgtcgtgttggtgtcgt-gtcggacactgacgcgtgttcgacaccaggacacgcctaattcgaggagtgtccgtgct 225203  T
Q  395 tcatagctt 403  Q
    |||| ||||    
T  225202 tcattgctt 225194  T

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