View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17979_low_1 (Length: 665)
Name: NF17979_low_1
Description: NF17979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17979_low_1 |
 | |
|
| [»] scaffold1453 (2 HSPs) |
| | |
|
| [»] chr6 (2 HSPs) |
| |
|
Alignment Details
Target: chr8 (Bit Score: 461; Significance: 0; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 461; E-Value: 0
Query Start/End: Original strand, 1 - 525
Target Start/End: Original strand, 30049259 - 30049806
Alignment:
| Q |
1 |
tgtacaagaggaatcaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatatcaatgtc |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30049259 |
tgtacaagaggaaccaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatatcaatgtc |
30049358 |
T |
|
| Q |
101 |
aaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaagcacttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30049359 |
aaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaagcacttc |
30049458 |
T |
|
| Q |
201 |
ctagtgccaagttcatggagctaagaagcaagctgggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaacttttctgaata |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30049459 |
ctagtgccaagttcatggagctaagaagcaagctaggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaacttttctgaata |
30049558 |
T |
|
| Q |
301 |
ctttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgtt-------------------agtaagattatctgcacaagtta |
381 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30049559 |
ctttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaaactatgctgcacaagtaagattatctgcacaagtta |
30049658 |
T |
|
| Q |
382 |
agtaggtttatgtc----atatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatggtatgt |
477 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30049659 |
agtaggtttatgtcatatatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatggtatgt |
30049758 |
T |
|
| Q |
478 |
atcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
525 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30049759 |
atcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
30049806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 3 - 525
Target Start/End: Original strand, 7162214 - 7162758
Alignment:
| Q |
3 |
tacaagaggaatcaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatatcaatgtcaa |
102 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
7162214 |
tacaagaggaaccaattgtgctatggtgtgacaacaaatcagctatagcaactgccaaaaatccaattcaacatggaagagcaaagcatatcaatgtcaa |
7162313 |
T |
|
| Q |
103 |
atttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaagcacttcct |
202 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||| || |
|
|
| T |
7162314 |
atttcatgctataagagaagctgaacagaatggagatgtaaaattgcagcactgcagttctgaagaacaattggcagacattttaaaaaaggcacttgct |
7162413 |
T |
|
| Q |
203 |
agtgccaagttcatggagctaagaagcaagctgggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaacttttctgaatact |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7162414 |
agtgccaagttcatggagctaagaagcaagctgggagtattccagaaaagttttaaggaggagtgttgactaattgacctataaaacttttctgaatact |
7162513 |
T |
|
| Q |
303 |
ttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaagattat-ctgcac---------------------aagtt |
380 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| | ||| |||||| ||||| |
|
|
| T |
7162514 |
ttattgtttatgttactttattgcttatgtgtgtaatcattttaacttattttgttagtaaaactatgctgcacaagtaataaggttatctgcacaagtt |
7162613 |
T |
|
| Q |
381 |
aagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatggtatgtatc |
480 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
7162614 |
aagcaggtttatgtcatatgacatcagctaagcataggctgagtcattactaagtatttggctataagtatgtaagaaggatgtatggatggtttgtatt |
7162713 |
T |
|
| Q |
481 |
aaatttgcagcatagtaaacattgttattgtccctttctcttcca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7162714 |
aaatttgcagcatagtaaacattgttattgtccctttctcttcca |
7162758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 266 - 525
Target Start/End: Original strand, 30045121 - 30045403
Alignment:
| Q |
266 |
tgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaa-- |
363 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30045121 |
tgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaaa |
30045220 |
T |
|
| Q |
364 |
-----------------gattatctgcacaagttaagtaggtttatgtcatat----gacatcagctaagcataggctgagtcattacttagtatttggc |
442 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30045221 |
ctatgctgcacaagtaagattatctgcacaagttaagtaggtttatgtcatatatatgacatcagctaagcataggctgagtcattacttagtatttggc |
30045320 |
T |
|
| Q |
443 |
tataagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30045321 |
tataagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
30045403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 597
Target Start/End: Original strand, 30045440 - 30045476
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaaca |
597 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30045440 |
gagcttattgcttctgctgccattacaaaagctaaca |
30045476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 597
Target Start/End: Original strand, 30049843 - 30049879
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaaca |
597 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30049843 |
gagcttattgcttctgctgccattacaaaagctaaca |
30049879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 594
Target Start/End: Original strand, 7162795 - 7162828
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagcta |
594 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
7162795 |
gagcttattgcttctgctgccattacaaaagcta |
7162828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 598
Target Start/End: Original strand, 44732164 - 44732201
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaacag |
598 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
44732164 |
gagcttattgcttctgctgcctttgcaaaagctaacag |
44732201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 597
Target Start/End: Original strand, 44734477 - 44734513
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaaca |
597 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
44734477 |
gagcttattgcttctgctgcctttgcaaaagctaaca |
44734513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 461; Significance: 0; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 461; E-Value: 0
Query Start/End: Original strand, 1 - 525
Target Start/End: Original strand, 3945513 - 3946060
Alignment:
| Q |
1 |
tgtacaagaggaatcaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatatcaatgtc |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3945513 |
tgtacaagaggaaccaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatatcaatgtc |
3945612 |
T |
|
| Q |
101 |
aaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaagcacttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3945613 |
aaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaagcacttc |
3945712 |
T |
|
| Q |
201 |
ctagtgccaagttcatggagctaagaagcaagctgggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaacttttctgaata |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3945713 |
ctagtgccaagttcatggagctaagaagcaagctaggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaacttttctgaata |
3945812 |
T |
|
| Q |
301 |
ctttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgtt-------------------agtaagattatctgcacaagtta |
381 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
3945813 |
ctttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaaactatgctgcacaagtaagattatctgcacaagtta |
3945912 |
T |
|
| Q |
382 |
agtaggtttatgtc----atatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatggtatgt |
477 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3945913 |
agtaggtttatgtcatatatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatggtatgt |
3946012 |
T |
|
| Q |
478 |
atcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
525 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3946013 |
atcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
3946060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 264 - 525
Target Start/End: Original strand, 3941377 - 3941661
Alignment:
| Q |
264 |
agtgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaa |
363 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3941377 |
agtgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaa |
3941476 |
T |
|
| Q |
364 |
-------------------gattatctgcacaagttaagtaggtttatgtcatat----gacatcagctaagcataggctgagtcattacttagtatttg |
440 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3941477 |
aactatgctgcacaagtaagattatctgcacaagttaagtaggtttatgtcatatatatgacatcagctaagcataggctgagtcattacttagtatttg |
3941576 |
T |
|
| Q |
441 |
gctataagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3941577 |
gctataagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
3941661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 561 - 598
Target Start/End: Original strand, 3941693 - 3941730
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaacag |
598 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3941693 |
gagcttattgcttctgctgccattacaaaagctaacag |
3941730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 597
Target Start/End: Original strand, 3946092 - 3946128
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaaca |
597 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3946092 |
gagcttattgcttctgctgccattacaaaagctaaca |
3946128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 597
Target Start/End: Original strand, 22804932 - 22804968
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaaca |
597 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
22804932 |
gagcttattgcttctgctgcctttgcaaaagctaaca |
22804968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 438; Significance: 0; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 1 - 525
Target Start/End: Original strand, 22365141 - 22365684
Alignment:
| Q |
1 |
tgtacaagaggaatcaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatatcaatgtc |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22365141 |
tgtacaagaggaaccaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatatcaatgtc |
22365240 |
T |
|
| Q |
101 |
aaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaagcacttc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22365241 |
aaatttcatgctataagagaagctgaacagaatggagatgtaaaattgcagcactgcagttctgaagaacaattggcagacattttaacaaaagcacttc |
22365340 |
T |
|
| Q |
201 |
ctagtgccaagttcatggagctaagaagcaagctgggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaacttttctgaata |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22365341 |
ctagtgccaagttcatggagctaagaagcaagctgggagtattccagataagttttaaggaggagtgttgactaattgacctataaaacttttctgaata |
22365440 |
T |
|
| Q |
301 |
ctttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgtt-------------------agtaagattatctgcacaagtta |
381 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
22365441 |
ctttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaaactatgctgcataagtaaggttatctgcacaagtta |
22365540 |
T |
|
| Q |
382 |
agtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatggtatgtatca |
481 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22365541 |
agtaggtttatgtcatatgacatcaactaagcataggctgagtcattactaagtatttggctataagtatgtaagaaggatgtatggatgatatgtatca |
22365640 |
T |
|
| Q |
482 |
aatttgcagcatagtaaacattgttattgtccctttctcttcca |
525 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22365641 |
aatttgcagtatagtaaacattgttattgtccctttctcttcca |
22365684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 266 - 525
Target Start/End: Original strand, 22361019 - 22361297
Alignment:
| Q |
266 |
tgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaa-- |
363 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22361019 |
tgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaag |
22361118 |
T |
|
| Q |
364 |
-----------------gattatctgcacaagttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctata |
446 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22361119 |
ctatgctgcacaagtaaggttatctgcacaagttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattactaagtatttggctata |
22361218 |
T |
|
| Q |
447 |
agtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22361219 |
agtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
22361297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 369 - 475
Target Start/End: Complemental strand, 23397298 - 23397192
Alignment:
| Q |
369 |
tctgcacaagttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatgg |
468 |
Q |
| |
|
|||| ||||||||| |||||||||||| |||||||||| | ||| ||| | | ||||||||| |||||||| || ||| |||||||||| ||||||||| |
|
|
| T |
23397298 |
tctgtacaagttaaataggtttatgtcgtatgacatcaacaaagtataagttatgtcattactaagtatttgactctaaatatgtaagaaagatgtatgg |
23397199 |
T |
|
| Q |
469 |
atggtat |
475 |
Q |
| |
|
||||||| |
|
|
| T |
23397198 |
atggtat |
23397192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 561 - 598
Target Start/End: Original strand, 22361333 - 22361370
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaacag |
598 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22361333 |
gagcttattgcttctgctgccattacaaaagctaacag |
22361370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 597
Target Start/End: Complemental strand, 36028843 - 36028807
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaaca |
597 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36028843 |
gagcttattgcttctgctgccattacaaaagctaaca |
36028807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 561 - 595
Target Start/End: Original strand, 22365720 - 22365754
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaa |
595 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
22365720 |
gagcttattgcttctgctgccattacaaaagctaa |
22365754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 525
Target Start/End: Complemental strand, 36028912 - 36028879
Alignment:
| Q |
492 |
atagtaaacattgttattgtccctttctcttcca |
525 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
36028912 |
atagtaaacattgttattgtccctttctcttcca |
36028879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 22135200 - 22135264
Alignment:
| Q |
59 |
aaaaatccaattcaacatggaagaacaaagcatatcaatgtcaaatttcatgctataagagaagc |
123 |
Q |
| |
|
||||||||| |||| ||||| ||||| ||||| |||||||| ||||| ||||| ||||||||||| |
|
|
| T |
22135200 |
aaaaatccagttcagcatggtagaactaagcacatcaatgtaaaattccatgccataagagaagc |
22135264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 285 - 350
Target Start/End: Complemental strand, 23397404 - 23397337
Alignment:
| Q |
285 |
aaaacttttctgaatactttattgtttatgttactttattgctta--tgtgtgtaattattttaactt |
350 |
Q |
| |
|
|||||||||||||||| || ||||| ||||||||||||||| || |||||||||| |||||||||| |
|
|
| T |
23397404 |
aaaacttttctgaatatttcgttgttaatgttactttattgcctatgtgtgtgtaatgattttaactt |
23397337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 597
Target Start/End: Complemental strand, 5353380 - 5353344
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaaca |
597 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
5353380 |
gagcttattgcttctgctgcctttgcaaaagctaaca |
5353344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 597
Target Start/End: Original strand, 28784835 - 28784871
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaaca |
597 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
28784835 |
gagcttattgcttctgctgcctttgcaaaagctaaca |
28784871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 421; Significance: 0; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 1 - 525
Target Start/End: Complemental strand, 39949917 - 39949376
Alignment:
| Q |
1 |
tgtacaagaggaatcaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatatcaatgtc |
100 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39949917 |
tgtacaagaggaaccaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatatcaatgta |
39949818 |
T |
|
| Q |
101 |
aaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaagcacttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39949817 |
aaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaagcacttc |
39949718 |
T |
|
| Q |
201 |
ctagtgccaagttcatggagctaagaagcaagctgggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaacttttctgaata |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
39949717 |
ctagtgccaagttcatggagctaagaagcaagctgggagtattccagaaaagttttaaggaggagtgttgactaattgacctataaaacttttctttata |
39949618 |
T |
|
| Q |
301 |
ctttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaagattat-ctgca----------------caagttaag |
383 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||||| |
|
|
| T |
39949617 |
ctttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaaactatgctgcacaagtaaggttatctgcaagttaag |
39949518 |
T |
|
| Q |
384 |
taggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatggtatgtatcaaa |
483 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||| || ||| |
|
|
| T |
39949517 |
taggtttatgtcatatgacatcagctaaacataggctgagttattactaagtatttggctataagtatgtaagaaggatgtatggatgatatataaaaaa |
39949418 |
T |
|
| Q |
484 |
tttgcagcatagtaaacattgttattgtccctttctcttcca |
525 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39949417 |
tttgcagcatagtaaacattgttattgtccctttctcttcca |
39949376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 265 - 525
Target Start/End: Complemental strand, 39954045 - 39953768
Alignment:
| Q |
265 |
gtgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaag |
364 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39954045 |
gtgttgactaattgacctataaaacttttctttatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaa |
39953946 |
T |
|
| Q |
365 |
attat-ctgcacaagt----------------taagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctataa |
447 |
Q |
| |
|
| ||| |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||||||||||||| |
|
|
| T |
39953945 |
actatgctgcacaagtaaggttatctgcaagttaagtaggtttatgtcatatgacatcagctaaacatagactgagttattactaagtatttggctataa |
39953846 |
T |
|
| Q |
448 |
gtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
525 |
Q |
| |
|
|||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39953845 |
gtatgtaagaaggatgtatggatgatatataaaaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
39953768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 561 - 598
Target Start/End: Complemental strand, 39953732 - 39953695
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaacag |
598 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39953732 |
gagcttattgcttctgctgccattacaaaagctaacag |
39953695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 597
Target Start/End: Complemental strand, 39949340 - 39949304
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaaca |
597 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39949340 |
gagcttattgcttctgctgccattacaaaagctaaca |
39949304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 408; Significance: 0; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 1 - 525
Target Start/End: Complemental strand, 196756 - 196224
Alignment:
| Q |
1 |
tgtacaagaggaatcaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatatcaatgtc |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
196756 |
tgtacaagaggaaccaattgtgctatggtgtgacaacaaatcagctatagcaattgccaaaaatccaattcaacatggaagaacaaagcatatcaatgtc |
196657 |
T |
|
| Q |
101 |
aaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaagcacttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
196656 |
aaatttcatgctataagagaagctgaacaaaatggagatgtaaaactgcagcactgcagttctgaagaacaattggcagacattttaacaaaagcacttc |
196557 |
T |
|
| Q |
201 |
ctagtgccaagttcatggagctaagaagcaagctgggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaacttttctgaata |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
196556 |
ctagtgccaagttcatggagctaagaagcaagctaggagtatttcaaaaaagttttaaggaggagtgttgactaattgacctataaaacttttctgaa-- |
196459 |
T |
|
| Q |
301 |
ctttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgtt-------------------agtaagattatctgcacaagtta |
381 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| |||||||||| ||||| |
|
|
| T |
196458 |
---------ttatgttactttattgtttatgtgtgtaatcattttaacttgttttgttagtaaaactatgctgcacaagtaaggttatctgcacgagtta |
196368 |
T |
|
| Q |
382 |
agtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatggtatgtatca |
481 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
196367 |
agtaggtttacgtcatatgacatcagctaagcataggctgagtcattactaagtatttggctataagtatgtaagaaggatgtatggatggtatgtatca |
196268 |
T |
|
| Q |
482 |
aatttgcagcatagtaaacattgttattgtccctttctcttcca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
196267 |
aatttgcagcatagtaaacattgttattgtctctttctcttcca |
196224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 264 - 525
Target Start/End: Complemental strand, 200872 - 200603
Alignment:
| Q |
264 |
agtgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaa |
363 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
200872 |
agtgttgactaattgacctataaaacttttctgaat-----------tatgttactttattgtttatgtgtgtaatcattttaacttgttttgttagtaa |
200784 |
T |
|
| Q |
364 |
ga-------------------ttatctgcacaagttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggcta |
444 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
200783 |
aactatgctgcacaagtaaggttatctgcacaagttaagtaggtttacctcatatgacatcagctaagcataggctgagtcattactaagtatttggcta |
200684 |
T |
|
| Q |
445 |
taagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
200683 |
taagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
200603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 561 - 599
Target Start/End: Complemental strand, 196188 - 196150
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaacaga |
599 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
196188 |
gagcttattgcttctgctgccattacaaaagctaacaga |
196150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 598
Target Start/End: Complemental strand, 200574 - 200537
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaacag |
598 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
200574 |
gagcttattgcttctgctaccattacaaaagctaacag |
200537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 597
Target Start/End: Original strand, 32800639 - 32800675
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaaca |
597 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
32800639 |
gagcttattgcttctgctgcctttgcaaaagctaaca |
32800675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 173; Significance: 1e-92; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 266 - 525
Target Start/End: Original strand, 1330569 - 1330847
Alignment:
| Q |
266 |
tgttgactaattgacctataaaacttttctgaatactttattgtttatgttactttattgcttatgtgtgtaattattttaacttgttttgttagtaaga |
365 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
1330569 |
tgttgactaattgacctataaaacttgtctgaatactttattgtttatgttactctattgcttatgtgtgtaatcattttaacttgttttgttagtaaaa |
1330668 |
T |
|
| Q |
366 |
-------------------ttatctgcacaagttaagtaggtttatgtcatatgacatcagctaagcataggctgagtcattacttagtatttggctata |
446 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||| | |||||||| ||||| |
|
|
| T |
1330669 |
ctatactgcacaagtaatgttatctgcacaagttaagtaggtttatgtcatatgacatcagcaaagtataggttgagtcattagtaagtatttgactata |
1330768 |
T |
|
| Q |
447 |
agtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
525 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1330769 |
agtatgtaagaaggatgtaaggatggtatgtatcaaatttgcagcatagtaaacattgttattgtccctttctcttcca |
1330847 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 561 - 597
Target Start/End: Original strand, 1330883 - 1330919
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaaca |
597 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1330883 |
gagcttattgtttctgctgccattacaaaagctaaca |
1330919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 598
Target Start/End: Original strand, 45336580 - 45336617
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaacag |
598 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
45336580 |
gagcttattgcttctgctgcctttgcaaaagctaacag |
45336617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 598
Target Start/End: Original strand, 45338892 - 45338929
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaacag |
598 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
45338892 |
gagcttattgcttctgctgcctttgcaaaagctaacag |
45338929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1453 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold1453
Description:
Target: scaffold1453; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 418 - 525
Target Start/End: Original strand, 1 - 108
Alignment:
| Q |
418 |
gctgagtcattacttagtatttggctataagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtcccttt |
517 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1 |
gctgagtcattactaagtatttggctataagtatgtaagaaggatgtatggatggtatgtatcaaatttgcagcatagtaaacattgttattgtcccttt |
100 |
T |
|
| Q |
518 |
ctcttcca |
525 |
Q |
| |
|
|||||||| |
|
|
| T |
101 |
ctcttcca |
108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1453; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 561 - 598
Target Start/End: Original strand, 144 - 181
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaacag |
598 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
144 |
gagcttattgcttctgctgccattacaaaagctaacag |
181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 68; Significance: 5e-30; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 598 - 665
Target Start/End: Original strand, 4517409 - 4517476
Alignment:
| Q |
598 |
gacacctttatcaatcaatgtacgaaagtgcaaagccgacagaagtgaacatgcactagctgaactaa |
665 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4517409 |
gacacctttatcaatcaatgtacgaaagtgcaaagccgacagaagtgaacatgcactagctgaactaa |
4517476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 657
Target Start/End: Original strand, 4569194 - 4569253
Alignment:
| Q |
598 |
gacacctttatcaatcaatgtacgaaagtgcaaagccgacagaagtgaacatgcactagc |
657 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||||| ||| |||||| |||||||||| |
|
|
| T |
4569194 |
gacacctttatcaataaatgtacgaaagagcaaagcacacaaaagtgaggatgcactagc |
4569253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 597
Target Start/End: Original strand, 1550478 - 1550514
Alignment:
| Q |
561 |
gagcttattgcttctgctgccattacaaaagctaaca |
597 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
1550478 |
gagcttattgcttctgctgcctttgcaaaagctaaca |
1550514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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