View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17981_low_11 (Length: 364)

Name: NF17981_low_11
Description: NF17981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17981_low_11
NF17981_low_11
[»] chr7 (25 HSPs)
chr7 (13-327)||(11665234-11665542)
chr7 (174-256)||(24339666-24339748)
chr7 (174-256)||(26033414-26033496)
chr7 (174-256)||(2334274-2334355)
chr7 (140-256)||(5409763-5409871)
chr7 (174-256)||(21560527-21560609)
chr7 (149-256)||(32093955-32094055)
chr7 (174-256)||(9778524-9778600)
chr7 (174-256)||(9408287-9408369)
chr7 (206-252)||(11272571-11272617)
chr7 (174-254)||(13770717-13770791)
chr7 (149-221)||(15680857-15680927)
chr7 (149-213)||(17852056-17852118)
chr7 (174-254)||(4794915-4794995)
chr7 (174-254)||(6028651-6028731)
chr7 (212-256)||(18039023-18039067)
chr7 (190-250)||(25822685-25822745)
chr7 (149-256)||(32308144-32308249)
chr7 (174-256)||(6630865-6630947)
chr7 (174-216)||(8234199-8234241)
chr7 (149-221)||(598256-598326)
chr7 (149-221)||(32287404-32287474)
chr7 (206-254)||(1885599-1885647)
chr7 (220-256)||(3991348-3991384)
chr7 (218-254)||(27945067-27945103)
[»] chr3 (16 HSPs)
chr3 (174-252)||(15796247-15796325)
chr3 (174-256)||(4987244-4987326)
chr3 (149-256)||(34185053-34185158)
chr3 (149-256)||(41961580-41961685)
chr3 (190-256)||(14209137-14209203)
chr3 (174-256)||(14832123-14832205)
chr3 (174-252)||(8039788-8039866)
chr3 (149-221)||(55401123-55401193)
chr3 (200-256)||(34910341-34910397)
chr3 (174-256)||(28812539-28812621)
chr3 (174-256)||(55212987-55213068)
chr3 (193-256)||(750590-750653)
chr3 (174-221)||(7171549-7171596)
chr3 (189-252)||(16789040-16789103)
chr3 (219-256)||(28918025-28918062)
chr3 (149-256)||(49651717-49651821)
[»] chr5 (12 HSPs)
chr5 (174-254)||(21522776-21522856)
chr5 (174-254)||(21533342-21533422)
chr5 (178-254)||(21542056-21542132)
chr5 (149-256)||(39698565-39698670)
chr5 (174-256)||(7677729-7677811)
chr5 (174-256)||(30183573-30183655)
chr5 (174-252)||(15382507-15382580)
chr5 (174-256)||(19579725-19579807)
chr5 (206-256)||(21351890-21351940)
chr5 (189-231)||(36642730-36642772)
chr5 (206-256)||(37328829-37328879)
chr5 (195-256)||(21814285-21814346)
[»] chr6 (19 HSPs)
chr6 (174-256)||(16766721-16766803)
chr6 (174-256)||(9522915-9522997)
chr6 (174-256)||(8365472-8365554)
chr6 (174-256)||(31384944-31385025)
chr6 (190-256)||(5970077-5970143)
chr6 (190-256)||(8714004-8714070)
chr6 (174-256)||(9107323-9107405)
chr6 (179-254)||(25038029-25038104)
chr6 (149-221)||(28152146-28152216)
chr6 (174-221)||(33001253-33001300)
chr6 (218-256)||(9911525-9911563)
chr6 (218-256)||(10770671-10770709)
chr6 (149-221)||(6898222-6898292)
chr6 (149-221)||(7977771-7977841)
chr6 (195-256)||(16488564-16488625)
chr6 (149-221)||(28715343-28715413)
chr6 (194-254)||(9195727-9195787)
chr6 (149-216)||(17841530-17841595)
chr6 (206-254)||(21395293-21395341)
[»] chr2 (19 HSPs)
chr2 (149-252)||(35056896-35056997)
chr2 (149-254)||(11223794-11223896)
chr2 (176-256)||(15657888-15657968)
chr2 (149-256)||(37419767-37419872)
chr2 (174-254)||(36756297-36756377)
chr2 (189-256)||(30717498-30717565)
chr2 (174-256)||(28524450-28524532)
chr2 (180-233)||(4207903-4207956)
chr2 (149-241)||(26769550-26769640)
chr2 (149-253)||(44860347-44860449)
chr2 (189-256)||(32749793-32749860)
chr2 (189-256)||(36096343-36096410)
chr2 (174-216)||(27084322-27084364)
chr2 (192-241)||(34337152-34337201)
chr2 (268-321)||(37558941-37558993)
chr2 (149-221)||(37559025-37559095)
chr2 (150-221)||(2438661-2438730)
chr2 (212-256)||(23058433-23058477)
chr2 (149-256)||(34784912-34785017)
[»] scaffold0136 (1 HSPs)
scaffold0136 (174-256)||(3802-3884)
[»] scaffold0044 (1 HSPs)
scaffold0044 (187-256)||(53204-53273)
[»] scaffold0003 (1 HSPs)
scaffold0003 (149-256)||(241618-241723)
[»] chr8 (19 HSPs)
chr8 (149-256)||(22652000-22652105)
chr8 (144-256)||(29510229-29510339)
chr8 (149-256)||(15816059-15816164)
chr8 (187-256)||(2572022-2572091)
chr8 (174-256)||(22197695-22197777)
chr8 (174-256)||(8343340-8343422)
chr8 (186-256)||(28745522-28745592)
chr8 (174-256)||(29447063-29447145)
chr8 (211-256)||(25566865-25566910)
chr8 (268-321)||(36450797-36450849)
chr8 (149-256)||(11944689-11944794)
chr8 (174-221)||(5813640-5813687)
chr8 (174-256)||(11927039-11927121)
chr8 (149-241)||(21465451-21465541)
chr8 (195-256)||(26902149-26902210)
chr8 (187-256)||(29447468-29447537)
chr8 (174-250)||(4673378-4673454)
chr8 (185-256)||(24362165-24362237)
chr8 (151-254)||(24727684-24727785)
[»] chr1 (25 HSPs)
chr1 (149-256)||(31694640-31694745)
chr1 (149-256)||(47989521-47989626)
chr1 (174-256)||(6427488-6427570)
chr1 (149-256)||(5944307-5944412)
chr1 (174-254)||(6612124-6612204)
chr1 (174-250)||(40917779-40917855)
chr1 (174-241)||(21032245-21032312)
chr1 (149-256)||(9828068-9828173)
chr1 (174-256)||(1486668-1486744)
chr1 (194-256)||(34371737-34371799)
chr1 (187-252)||(9629866-9629931)
chr1 (181-256)||(25361910-25361983)
chr1 (200-256)||(44482254-44482310)
chr1 (177-221)||(46348350-46348394)
chr1 (191-254)||(30173732-30173795)
chr1 (174-221)||(51410073-51410120)
chr1 (210-256)||(6332694-6332740)
chr1 (218-256)||(24577183-24577221)
chr1 (174-256)||(32461417-32461498)
chr1 (174-215)||(15323222-15323263)
chr1 (149-221)||(22515828-22515898)
chr1 (268-321)||(46348426-46348478)
chr1 (206-254)||(5376485-5376533)
chr1 (187-255)||(27471532-27471600)
chr1 (149-200)||(46940749-46940798)
[»] chr4 (16 HSPs)
chr4 (174-256)||(30982831-30982913)
chr4 (149-256)||(19482692-19482797)
chr4 (174-256)||(19312359-19312441)
chr4 (149-221)||(34306745-34306815)
chr4 (174-230)||(15724507-15724563)
chr4 (188-256)||(22234857-22234925)
chr4 (174-221)||(21945551-21945598)
chr4 (149-221)||(23292927-23292997)
chr4 (175-252)||(30838238-30838315)
chr4 (174-254)||(847977-848057)
chr4 (188-256)||(24613668-24613736)
chr4 (176-256)||(38148680-38148760)
chr4 (174-256)||(27706130-27706212)
chr4 (211-256)||(4383391-4383436)
chr4 (268-321)||(24543944-24543997)
chr4 (181-241)||(53490724-53490784)
[»] scaffold0450 (1 HSPs)
scaffold0450 (149-256)||(8565-8670)
[»] scaffold0086 (1 HSPs)
scaffold0086 (174-256)||(2952-3034)
[»] scaffold0019 (1 HSPs)
scaffold0019 (174-256)||(71749-71831)
[»] scaffold0008 (1 HSPs)
scaffold0008 (174-255)||(263325-263406)
[»] scaffold0053 (1 HSPs)
scaffold0053 (174-221)||(8846-8893)
[»] scaffold0361 (1 HSPs)
scaffold0361 (174-216)||(14580-14622)
[»] scaffold0123 (1 HSPs)
scaffold0123 (189-256)||(44493-44560)
[»] scaffold0025 (1 HSPs)
scaffold0025 (218-256)||(23794-23832)
[»] scaffold0171 (1 HSPs)
scaffold0171 (192-256)||(23535-23599)


Alignment Details
Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 13 - 327
Target Start/End: Original strand, 11665234 - 11665542
Alignment:
Q  13 aatattaactttacgcctctctattataatatcattgataatagatgagagtcttattctagcctaaaacaagccaaaaatagaaaagtctcatgttaga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11665234 aatattaactttacgcctctctattataatatcattgataatagatgagagtcttattctagcctaaaacaagccaaaaatagaaaagtctcatgttaga 11665333  T
Q  113 atcaagacaannnnnnnnggaactttgttagtaacatatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccga 212  Q
    |||||| |||        | ||||||||||||||| ||||||||||| ||| | ||||  ||||||  |||||||||||||||||||||||| ||| |||    
T  11665334 atcaagtcaattttttttgcaactttgttagtaacgtatgaagcacggacattcctcg--tattagatgtgtttcggtgtcggacacgtgtcgtgttcga 11665431  T
Q  213 cacctacacgacaccgacaattgtaattagactgaattatgtgannnnnnnnnnnaaattattagttgtgtcggcgtatcaatgttcgatgtccgtatcc 312  Q
    |||| ||| |||| ||||| || |||||||||||||||||||||           ||||||||||||||||| |||| ||||| | |  |||||||||||    
T  11665432 caccgacatgacatcgacacttataattagactgaattatgtga----ttttttcaaattattagttgtgtcagcgtgtcaatatccagtgtccgtatcc 11665527  T
Q  313 gtgcttcatcaacta 327  Q
    || ||||||||||||    
T  11665528 gttcttcatcaacta 11665542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 24339748 - 24339666
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  |||||||||| ||||||| ||||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  24339748 attaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtga 24339666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 26033414 - 26033496
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||| ||||  |||| |||||||||||||||||| |||||| |||||| ||||||| ||||||||| ||||||||||||||    
T  26033414 attaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtga 26033496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 2334355 - 2334274
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||| |||||||| |||||||||| ||||| ||||||||||  |||||||||||||| ||||||||| ||| ||||||||||    
T  2334355 attagacgtgtttcagtgtcggacatgtgtcgtgtccgacacg-acacgacaccgacacttgtaattacactaaattatgtga 2334274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 5409763 - 5409871
Alignment:
Q  140 ttagtaacatatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaat 239  Q
    |||| ||| ||||||||||| ||||| |||| ||  |||||||||  |||||||||||||||||| ||||||      |||||||||||||| |||||||    
T  5409763 ttaggaacctatgaagcacggacactcctcggat--taggcgtgtcccggtgtcggacacgtgtcgtgtccg------acacgacaccgacacttgtaat 5409854  T
Q  240 tagactgaattatgtga 256  Q
    |  ||||||||||||||    
T  5409855 tgcactgaattatgtga 5409871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 21560609 - 21560527
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||||||||||  |||| || || |||  |||||| | |||||||||||| ||||||||| ||||||||||||||    
T  21560609 attaggcgtgtttcggtgttagacatgtatcgtgtttgacaccgatacgacaccgacacttgtaattacactgaattatgtga 21560527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 32093955 - 32094055
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttc-ggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactga 247  Q
    ||||||||||||||||| |||| ||  |||||||||  | ||||||||||||||||| ||||||||||      |||||||||| ||||||||| |||||    
T  32093955 tatgaagcacgaacactcctcggat--taggcgtgtccccggtgtcggacacgtgtcgtgtccgacac------gacaccgacatttgtaattacactga 32094046  T
Q  248 attatgtga 256  Q
    |||||||||    
T  32094047 attatgtga 32094055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 9778600 - 9778524
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  |||||||||||||||||  ||||||||||      |||||||||| ||||||||| ||||||||||||||    
T  9778600 attaggcgtgtcccggtgtcggacacgtgttgtgtccgacac------gacaccgacacttgtaattatactgaattatgtga 9778524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 9408287 - 9408369
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||||||||| ||||||||| |  | || |||| |||||| | |||||||||||| ||||||||| ||| ||||||||||    
T  9408287 attaggcgtgttttggtgtcggatatatatcgtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtga 9408369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 11272571 - 11272617
Alignment:
Q  206 tgtccgacacctacacgacaccgacaattgtaattagactgaattat 252  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  11272571 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat 11272617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 13770791 - 13770717
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    |||||||||||| |||||||||||||||||  ||||||      |||||||| ||||| ||||||||| ||||||||||||    
T  13770791 attaggcgtgttccggtgtcggacacgtgttgtgtccg------acacgacaacgacacttgtaattacactgaattatgt 13770717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 15680927 - 15680857
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||||| ||||| |||| ||  ||| ||||| ||||||||||||||||||| ||||||||||| ||||    
T  15680927 tatgaagcacggacactcctcgaat--tagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 15680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 17852118 - 17852056
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgac 213  Q
    ||||||||||| ||||| |||| ||  |||| |||| ||||||||||||||||||||||||||||    
T  17852118 tatgaagcacggacactcctcgaat--taggtgtgtctcggtgtcggacacgtgtcatgtccgac 17852056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 4794995 - 4794915
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    ||||| ||||||| |||||| || ||||||| ||||||||||| | |||  ||||||| || |||||| ||||||||||||    
T  4794995 attagacgtgtttaggtgtcagatacgtgtcgtgtccgacaccgatacggtaccgacacttataattacactgaattatgt 4794915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 6028731 - 6028651
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    ||||||||||| || |||||| || |||||| ||| ||||||  |||||||||||||| ||||||||| | | ||||||||    
T  6028731 attaggcgtgtctcagtgtcgaactcgtgtcgtgttcgacactgacacgacaccgacatttgtaattacattaaattatgt 6028651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 18039067 - 18039023
Alignment:
Q  212 acacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||    
T  18039067 acaccgacacgacaccgacacttgtaattacactgaattatgtga 18039023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 25822745 - 25822685
Alignment:
Q  190 tgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaatt 250  Q
    |||| |||||||||| ||||||| ||| | |||||||||||| ||||||||| ||||||||    
T  25822745 tgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaatt 25822685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 32308249 - 32308144
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||| ||||||| |||| ||  |||  |||| ||||||||||||| ||||| ||||| ||||| ||||||||| ||||  |  ||||| ||||||    
T  32308249 tatgaagcatgaacactcctcggat--tagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaa 32308152  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  32308151 ttatgtga 32308144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 6630865 - 6630947
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||| |||| | |||||||| |||||||  ||||||||||| |||||||| |||||  | |||||| ||||||||| ||||    
T  6630865 attaggtgtgtcttggtgtcgggcacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtga 6630947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 8234241 - 8234199
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacc 216  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||    
T  8234241 attaggcgtgtctcggtgtcggacatgtgtcgtgtccgacacc 8234199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 598326 - 598256
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||||| ||||| |||| ||  |||||||||  |||||||||||||||||| |||| |||||| ||||    
T  598326 tatgaagcacggacacttctcggat--taggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 598256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 32287404 - 32287474
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||||| ||||| |||| ||  |||| ||||  ||||||||||||| |||||||||||||||| ||||    
T  32287404 tatgaagcacggacactcctcggat--taggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacac 32287474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 1885647 - 1885599
Alignment:
Q  206 tgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    ||||||||||| |||||||||||||| |||| |||| | ||||||||||    
T  1885647 tgtccgacaccaacacgacaccgacacttgtgattacattgaattatgt 1885599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 3991384 - 3991348
Alignment:
Q  220 acgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtga 3991348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 27945103 - 27945067
Alignment:
Q  218 acacgacaccgacaattgtaattagactgaattatgt 254  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  27945103 acacgacaccgacacttgtaattacactgaattatgt 27945067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 15796247 - 15796325
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattat 252  Q
    |||||||||||| |||||| ||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||    
T  15796247 attaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattat 15796325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 4987244 - 4987326
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  |||||||||||||||||| ||||| ||||| ||||| |||| ||| ||||||||| ||||||||||||||    
T  4987244 attaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtga 4987326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 34185053 - 34185158
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||| ||  |||||||||  ||||||||||||| |||| |||||||||   |||||||||||||| ||||||||| ||||||    
T  34185053 tatgaagcacggacactcctcggat--taggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaa 34185150  T
Q  249 ttatgtga 256  Q
    || |||||    
T  34185151 ttgtgtga 34185158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 41961580 - 41961685
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||| ||  |||||||||  | |||||||||||||||| ||||||| ||| |||||||||||||| ||||||||| || |||    
T  41961580 tatgaagcacggacacttctcggat--taggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaa 41961677  T
Q  249 ttatgtga 256  Q
    | ||||||    
T  41961678 taatgtga 41961685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 14209203 - 14209137
Alignment:
Q  190 tgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||| ||||||||| ||||||||||| ||||||||| |||| ||||||||| ||||||||||||||    
T  14209203 tgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtga 14209137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 14832205 - 14832123
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  |||||||||||||||||| ||||||| ||| ||||||||| |||| ||||||||| | ||| ||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtga 14832123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 8039788 - 8039866
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattat 252  Q
    |||| ||||||  |||||||||||| || |||||||||||||| ||||||||||||||  | |||||| ||||||||||    
T  8039788 attaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattat 8039866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 55401193 - 55401123
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||||| ||||| |||| ||  ||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  55401193 tatgaagcacggacactcctcggat--taggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 55401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 34910397 - 34910341
Alignment:
Q  200 gtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||||||||||||| | |||||||||||  ||||||||| ||||||||||||||    
T  34910397 gtgtcatgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtga 34910341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 28812621 - 28812539
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||   | ||||||||| || || |||| |||||| |||||||||||||| |||||| || ||||||||||||||    
T  28812621 attaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtga 28812539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 55213068 - 55212987
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||| |||||| ||||||||||||||||||  || |||||||| |||| ||||||||| ||||||||  ||| ||||||||||    
T  55213068 attatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaattatgtga 55212987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 750590 - 750653
Alignment:
Q  193 cggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||| ||||||| ||| |||||||||||||| ||||||||  |  |||||||||||    
T  750590 cggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtga 750653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 7171596 - 7171549
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    |||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  7171596 attaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacac 7171549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 16789103 - 16789040
Alignment:
Q  189 gtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattat 252  Q
    |||| ||||| ||||||||||||||||  |||||||||| ||| || |||||| ||||||||||    
T  16789103 gtgttggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaattat 16789040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 28918062 - 28918025
Alignment:
Q  219 cacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  28918062 cacgacaccgacacttgtaattacactgaattatgtga 28918025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 49651717 - 49651821
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||| ||  |||| ||||  |||||||||| | ||||| ||||||   || |||||||||||||| ||||||||| | ||||    
T  49651717 tatgaagcacggacacttctcggat--taggtgtgtcccggtgtcggatatgtgtcgtgtccggt-ccgacacgacaccgacacttgtaattacagtgaa 49651813  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  49651814 ttatgtga 49651821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 21522856 - 21522776
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    |||||||||||  ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  21522856 attaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgt 21522776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 21533422 - 21533342
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    |||||||||||  ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  21533422 attaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgt 21533342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 21542132 - 21542056
Alignment:
Q  178 ggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    |||||||  |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  21542132 ggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgt 21542056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 39698670 - 39698565
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||| ||  ||||||||| ||||||||||| || |||| ||||||||||| ||||||||| |||| ||||||||| ||||||    
T  39698670 tatgaagcacggacactcctcggat--taggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaa 39698573  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  39698572 ttatgtga 39698565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 7677811 - 7677729
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  |||||||||||| ||| | |||| |||||| |||||||||||||| || |||||  ||||||||||||||    
T  7677811 attaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtga 7677729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 30183655 - 30183573
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  | |||||||||||||||| |||| || ||| |||||||||||||| ||||||||| || |||| ||||||    
T  30183655 attaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatgtga 30183573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 252
Target Start/End: Complemental strand, 15382580 - 15382507
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattat 252  Q
    |||||||||||  |||||||||||| ||||| ||||| |||||     |||||||||| ||||||||| ||||||||||    
T  15382580 attaggcgtgtcccggtgtcggacatgtgtcgtgtccaacacc-----gacaccgacacttgtaattatactgaattat 15382507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 19579807 - 19579725
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  ||||||  ||||  |||| ||||||||||  |||||||||||||| ||||||||  ||| ||||||||||    
T  19579807 attaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtga 19579725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 21351890 - 21351940
Alignment:
Q  206 tgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||| |||||| ||| |||||||||| ||||||||| ||||||||||||||    
T  21351890 tgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtga 21351940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 36642730 - 36642772
Alignment:
Q  189 gtgtcggacacgtgtcatgtccgacacctacacgacaccgaca 231  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||    
T  36642730 gtgtcggacacgtgtcgtgtccgacaccaacatgacaccgaca 36642772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 37328829 - 37328879
Alignment:
Q  206 tgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||| |||||    
T  37328829 tgtccgacaccgacacgacaccgacacatgtaattacactgaattttgtga 37328879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 21814346 - 21814285
Alignment:
Q  195 gacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||| ||||||||||| ||||||||||||||  | |||||| |||| ||| |||||    
T  21814346 gacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtga 21814285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 16766803 - 16766721
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  |||||||||||||||||  ||||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  16766803 attaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtga 16766721  T

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Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 9522997 - 9522915
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||||||| |||||||||||||||||||   ||||||||| |||| ||||||||| ||||||||| ||||||||||||||    
T  9522997 attaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtga 9522915  T

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Target: chr6; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 8365472 - 8365554
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  | |||||||||||||||| ||||||| ||| |||||||||||||| ||||||||| || |||||||||||    
T  8365472 attaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtga 8365554  T

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Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 31385025 - 31384944
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  |||||| ||||||||||| ||||| |||| |||||||||| |||| ||||||||| ||||||||||||||    
T  31385025 attaggcgtgtcccggtgtaggacacgtgtcgtgtccaacac-tacacgacactgacacttgtaattacactgaattatgtga 31384944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 5970077 - 5970143
Alignment:
Q  190 tgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||| | ||||| ||||||||||| |||||||||| ||| ||||||||| ||||||||||||||    
T  5970077 tgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtga 5970143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 8714070 - 8714004
Alignment:
Q  190 tgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||| | ||||| ||||||||||| |||||||||| ||| ||||||||| ||||||||||||||    
T  8714070 tgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtga 8714004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 9107323 - 9107405
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||| ||||  |||||||||||||  ||  ||||||||||| |||||||||||||| ||||||||| |||||||| |||||    
T  9107323 attaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtga 9107405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 25038029 - 25038104
Alignment:
Q  179 gcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    |||||||  ||||||||||||||||| |||| |||||| |||| | ||||||| ||||||||| ||| ||||||||    
T  25038029 gcgtgttctggtgtcggacacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgt 25038104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 28152216 - 28152146
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||||||||||| |||| ||  ||||| |||  |||||||||||||||||| ||||||||||| ||||    
T  28152216 tatgaagcacgaacactcctcggat--taggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 28152146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 33001253 - 33001300
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||| |||||||||| |||||||||| ||||||||||| ||||    
T  33001253 attaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacac 33001300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 9911525 - 9911563
Alignment:
Q  218 acacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  9911525 acacgacaccgacacttgtaattacactgaattatgtga 9911563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 10770671 - 10770709
Alignment:
Q  218 acacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  10770671 acacgacaccgacacttgtaattacactgaattatgtga 10770709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 6898222 - 6898292
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    |||||||||||||||||  ||| ||  ||||||||||||||||| |||||||  || ||||||||||| ||||    
T  6898222 tatgaagcacgaacactcatcggat--taggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacac 6898292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 7977771 - 7977841
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||||||||||| ||  || ||||||||||||||| |||||||||  |||  ||||||||||| ||||    
T  7977771 tatgaagcacgaacactcct--tagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacac 7977841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 16488564 - 16488625
Alignment:
Q  195 gacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||| ||||||||||| ||||||||||||||  | |||||| |||| ||| |||||    
T  16488564 gacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtga 16488625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 28715413 - 28715343
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||||| ||||| |||| ||  |||||||||  |||||||| ||||||||| ||||||||||| ||||    
T  28715413 tatgaagcacgtacacttctcgaat--taggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacac 28715343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 9195727 - 9195787
Alignment:
Q  194 ggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    |||||| |||| |||| |||||||||||||||||||||  | |||||| ||| ||||||||    
T  9195727 ggacacatgtcgtgtcagacacctacacgacaccgacacatataattacactaaattatgt 9195787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 17841530 - 17841595
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacc 216  Q
    ||||||||||| ||||| |||| ||  ||||||||| || ||||||||||| |||| |||||||||||    
T  17841530 tatgaagcacggacactcctcggat--taggcgtgtctcagtgtcggacacatgtcgtgtccgacacc 17841595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 21395293 - 21395341
Alignment:
Q  206 tgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    ||||||||||  |||||||||||||| ||||||||| ||| ||||||||    
T  21395293 tgtccgacactgacacgacaccgacacttgtaattacactaaattatgt 21395341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 35056997 - 35056896
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||  | |||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||  | |||||| ||||||    
T  35056997 tatgaagcacggacactcctc--agattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaa 35056900  T
Q  249 ttat 252  Q
    ||||    
T  35056899 ttat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 11223794 - 11223896
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||  | |||||||||||  ||||||| |||| ||||| ||||||||||||||| |||||||||| ||||||||| ||||||    
T  11223794 tatgaagcacggacactcctc--agattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaa 11223890  T
Q  249 ttatgt 254  Q
    ||||||    
T  11223891 ttatgt 11223896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 15657968 - 15657888
Alignment:
Q  176 taggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||  ||| ||||||||||||||  |||||||| | |||||||||||||| ||||||||| ||||||||||||||    
T  15657968 taggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaattatgtga 15657888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 37419872 - 37419767
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||| ||  |||||||||  ||||||||||||||  || ||||||||||| ||||||||||| || ||||||||| ||||||    
T  37419872 tatgaagcacggacactcctcggat--taggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaa 37419775  T
Q  249 ttatgtga 256  Q
    || |||||    
T  37419774 ttttgtga 37419767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 36756297 - 36756377
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    |||||||||||| |||||||||||| ||||  ||| ||||||  |||||||||||||| || |||||| ||||||||||||    
T  36756297 attaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaattatgt 36756377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 30717498 - 30717565
Alignment:
Q  189 gtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||| ||||||||| ||||||||| | |||||||| ||||| ||||||||| ||||||||||||||    
T  30717498 gtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 30717565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 28524532 - 28524450
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||||| ||||| |||||||||  ||||||||||| |||| ||| |||||  | |||||| ||||||||||||||    
T  28524532 attaggcgtgtttctgtgtcagacacgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtga 28524450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 4207956 - 4207903
Alignment:
Q  180 cgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaat 233  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||| |||||||||    
T  4207956 cgtgtttcggtgtcgaacacgtgtcgtgtccgacaccgacacgataccgacaat 4207903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 26769640 - 26769550
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaatta 241  Q
    ||||||||||| ||||| |||| ||  |||||||||  | |||||||||||||||| ||||||| ||| ||| |||||||||| |||||||||    
T  26769640 tatgaagcacggacactcctcggat--taggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaatta 26769550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 44860449 - 44860347
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||| ||  |||| ||||  || |||||||||| |||| ||||| ||||| ||||||||||||||  | |||||| ||||||    
T  44860449 tatgaagcacggacactcctcgaat--taggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaa 44860352  T
Q  249 ttatg 253  Q
    |||||    
T  44860351 ttatg 44860347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 32749793 - 32749860
Alignment:
Q  189 gtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||||||| ||||| |||||||| | ||||||||| |||| || | |||| ||||||||||||||    
T  32749793 gtgtcggacacatgtcacgtccgacatcgacacgacactgacacttattattacactgaattatgtga 32749860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 36096343 - 36096410
Alignment:
Q  189 gtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||| |||||||||| ||||||||| | ||||||||||||||| | |||||| |||| ||| |||||    
T  36096343 gtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcattttgtga 36096410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 27084364 - 27084322
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacc 216  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||    
T  27084364 attaggcgtgtctcggtgttggacacgtgtcgtgtccgacacc 27084322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 34337152 - 34337201
Alignment:
Q  192 tcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaatta 241  Q
    ||||||||||||  ||||||||||| ||| |||||||||| |||||||||    
T  34337152 tcggacacgtgttgtgtccgacaccgacaggacaccgacacttgtaatta 34337201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 37558993 - 37558941
Alignment:
Q  268 aaattattagttgtgtcggcgtatcaatgttcgatgtccgtatccgtgcttcat 321  Q
    |||||||||| ||||||||||| ||| ||| || ||||||||||||||||||||    
T  37558993 aaattattagctgtgtcggcgtgtcagtgtccg-tgtccgtatccgtgcttcat 37558941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 37559095 - 37559025
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||||| ||||| |||| ||  || ||||||  ||||||||||||||||||| |||||||||| ||||    
T  37559095 tatgaagcacggacactcctcggat--taagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacac 37559025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 2438661 - 2438730
Alignment:
Q  150 atgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    |||||||||| ||||| |||| ||  |||||||||  |||||||||||| ||||| ||||||||||| ||||    
T  2438661 atgaagcacggacactcctcggat--taggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 2438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 23058433 - 23058477
Alignment:
Q  212 acacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||| |||||||||||||| ||||||||| |||| |||||||||    
T  23058433 acaccgacacgacaccgacacttgtaattacactggattatgtga 23058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 34784912 - 34785017
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||  ||||| |||| |||  ||||||||  | ||||| |||| ||||| ||||||| ||| ||||||||||||||  | |||||| ||| ||    
T  34784912 tatgaagcacagacactcctcgaata--aggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaa 34785009  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  34785010 ttatgtga 34785017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 3802 - 3884
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||||||| ||| ||||||||| ||||| ||||||||||| ||||||||| |||| ||||||||| ||||||||||||||    
T  3802 attaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtga 3884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 53273 - 53204
Alignment:
Q  187 cggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||||||||||||||||||||| ||||| |||||||| || |||||| ||||||||||||||    
T  53273 cggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtga 53204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 241723 - 241618
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||| ||  |||||||||  |||||||||||||||||| ||||||||||| |||||||||||||| |  |||||| ||| ||    
T  241723 tatgaagcacggacacttctcggat--taggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaa 241626  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  241625 ttatgtga 241618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 6e-19; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 22652105 - 22652000
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||| ||  ||| |||||  ||||||||||||| |||| ||||||||||| |||||||||||||| ||||||||| | ||||    
T  22652105 tatgaagcacggacactcctcggat--tagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaa 22652008  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  22652007 ttatgtga 22652000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 29510229 - 29510339
Alignment:
Q  144 taacatatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattaga 243  Q
    |||| ||||||||||| ||||| |||| ||  |||| ||||  |||||||||||||| ||| ||||||||||| |||| ||||||||| ||||||||| |    
T  29510229 taacctatgaagcacggacactcctcggat--taggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattata 29510326  T
Q  244 ctgaattatgtga 256  Q
    ||||||| |||||    
T  29510327 ctgaattttgtga 29510339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 15816059 - 15816164
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||| ||  |||||||||  ||||||||||  |||||| ||||||||||| |||||||||||||| || |||||| ||| ||    
T  15816059 tatgaagcacggacacttctcggat--taggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaa 15816156  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  15816157 ttatgtga 15816164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 2572022 - 2572091
Alignment:
Q  187 cggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||| ||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||| ||||||||||    
T  2572022 cggtatcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtga 2572091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 22197695 - 22197777
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac-gacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||| | |||||||||||||||||||||||||||| | |||| ||||| |||| ||||||||| ||| ||||||||||    
T  22197695 attaggcgtgatccggtgtcggacacgtgtcatgtccgaca-cgacactgacactgacacttgtaattacactaaattatgtga 22197777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 8343422 - 8343340
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  |||||||||||||||||| |||| ||||| |  ||||||| |||| ||||||||| ||| ||||||||||    
T  8343422 attaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaattatgtga 8343340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 256
Target Start/End: Complemental strand, 28745592 - 28745522
Alignment:
Q  186 tcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||| |||||| ||||| ||||||||||| |||||||| ||||| ||||| ||| | ||||||||||||    
T  28745592 tcggtgacggacaggtgtcgtgtccgacaccgacacgacatcgacatttgtagttacattgaattatgtga 28745522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 29447063 - 29447145
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||   |||||| ||||| |||| ||||||||||| ||| |||||||||| ||||| ||| | ||||||||||||    
T  29447063 attaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtga 29447145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 25566910 - 25566865
Alignment:
Q  211 gacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||    
T  25566910 gacaccaacacgacaccgacacttgtaattacactgaattatgtga 25566865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 36450797 - 36450849
Alignment:
Q  268 aaattattagttgtgtcggcgtatcaatgttcgatgtccgtatccgtgcttcat 321  Q
    |||||||||||||||||||||| ||| ||| || ||||||||||||||||||||    
T  36450797 aaattattagttgtgtcggcgtgtcagtgtccg-tgtccgtatccgtgcttcat 36450849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 11944794 - 11944689
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    |||||||||||||||||  ||| ||  ||||||||| ||||||||||| || |||| |||  |||| | ||||||||||||||  | |||||| |||||     
T  11944794 tatgaagcacgaacactcatcggat--taggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgag 11944697  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  11944696 ttatgtga 11944689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 5813687 - 5813640
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    |||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  5813687 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 5813640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 11927039 - 11927121
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||||||| ||| ||| ||| || |||| |||  |||||| ||||||||||||||  | |||||| ||||||||||||||    
T  11927039 attaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaattatgtga 11927121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 21465541 - 21465451
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaatta 241  Q
    ||||||||||| ||||| |||  | ||||||||| |  | |||| ||||||||||| ||||||||||  |||||||||| ||| |||||||||    
T  21465541 tatgaagcacggacactcctc--aaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaatta 21465451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 26902149 - 26902210
Alignment:
Q  195 gacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||| ||||||||||  | ||||||||||||  | |||||| ||||||||||||||    
T  26902149 gacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaattatgtga 26902210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 29447537 - 29447468
Alignment:
Q  187 cggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||||||||| |||| |||| |||||| |||||||||| |||  | |||||| ||| ||||||||||    
T  29447537 cggtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaattatgtga 29447468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 4673378 - 4673454
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaatt 250  Q
    |||||||||||| |||||||||| | | ||| ||||||||| | ||| ||||| || | ||||||||| ||||||||    
T  4673378 attaggcgtgttccggtgtcggatatgcgtcgtgtccgacatcaacaagacactgatacttgtaattacactgaatt 4673454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 24362165 - 24362237
Alignment:
Q  185 ttcggtgtcggacacgtgtcatgtcc-gacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||| |||||||||||| ||||| |||||| ||||||||  ||||  | |||||| ||||||||||||||    
T  24362165 ttcggtgccggacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaattatgtga 24362237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 254
Target Start/End: Original strand, 24727684 - 24727785
Alignment:
Q  151 tgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaatt 250  Q
    ||||||||||||||| |||| ||  ||||||||||  ||| | ||||||||||||||| ||| ||| ||| |||||  ||| ||| ||||| |||| |||    
T  24727684 tgaagcacgaacacttctcggat--taggcgtgttctggtattggacacgtgtcatgttcgataccgacatgacactaacacttgaaattacactgcatt 24727781  T
Q  251 atgt 254  Q
    ||||    
T  24727782 atgt 24727785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 31694640 - 31694745
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||  | |||||||||||| |||||||| | | ||||  ||||||||||| |||||||||||||| ||||||||| ||||||    
T  31694640 tatgaagcacggacactcctc--agattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 31694737  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  31694738 ttatgtga 31694745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 47989626 - 47989521
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||| ||  |||||||||  || |||| |||| ||||| ||||||||||| |||||||||||||| ||||||||| ||||||    
T  47989626 tatgaagcacggacactcctcggat--taggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaa 47989529  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  47989528 ttatgtga 47989521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 6427570 - 6427488
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  |||||||||||||||||| |||||||| |||||||||||| |||| ||||| ||| | ||||||||||||    
T  6427570 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaattatgtga 6427488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 5944412 - 5944307
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||||||||| |||| ||  ||||||| |  |||||||||||| ||||  |||||| || | |||||||||||||| || |||||| ||||||    
T  5944412 tatgaagcacgaacactcctcggat--taggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaa 5944315  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  5944314 ttatgtga 5944307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 6612124 - 6612204
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    |||||||||||   |||||||||||| | || ||||||||| | |||||||||||||| ||||||||| ||||||||||||    
T  6612124 attaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgt 6612204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 40917855 - 40917779
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaatt 250  Q
    |||||||||||  |||||||||||||||||| ||||| ||||| |||||||||||| | ||||||||| ||| ||||    
T  40917855 attaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaatt 40917779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 21032312 - 21032245
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaatta 241  Q
    ||||||||| | ||| |||||||||| |||| ||||||||||| |||||||||||||| |||||||||    
T  21032312 attaggcgtctctcgatgtcggacacatgtcgtgtccgacacccacacgacaccgacatttgtaatta 21032245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 9828173 - 9828068
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||| ||  ||| |||||  |||||||||||||||||| |||| |||||  ||||||||||||||  |  ||||| ||||||    
T  9828173 tatgaagcacggacactcctcggat--tagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaa 9828076  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  9828075 ttatgtga 9828068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 1486668 - 1486744
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  |||||||||||||||||| ||||||      |||||||||||||| || |||||| ||||||||||||||    
T  1486668 attaggcgtgtcccggtgtcggacacgtgtcgtgtccg------acacgacaccgacacttataattacactgaattatgtga 1486744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 34371799 - 34371737
Alignment:
Q  194 ggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||||||| | ||||||||| ||||||||||||||  | |||||| ||||||||||||||    
T  34371799 ggacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtga 34371737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 9629866 - 9629931
Alignment:
Q  187 cggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattat 252  Q
    |||||||||||| ||||| ||||||||| | |||||||||||||| || |||| | ||||||||||    
T  9629866 cggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattat 9629931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 256
Target Start/End: Complemental strand, 25361983 - 25361910
Alignment:
Q  181 gtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||| ||||||||||||  |||| ||||||||||| ||||||||| ||||  | |||||| ||||||||||||||    
T  25361983 gtgttccggtgtcggaca--tgtcgtgtccgacaccgacacgacactgacacatataattacactgaattatgtga 25361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 44482310 - 44482254
Alignment:
Q  200 gtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||| ||||||||||| ||||||||||||||  | |||||| ||||||||||||||    
T  44482310 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtga 44482254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 46348350 - 46348394
Alignment:
Q  177 aggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||    
T  46348350 aggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 46348394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 30173732 - 30173795
Alignment:
Q  191 gtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    |||||||| ||||| ||||||| ||  |||||||||||||| ||||||||| ||||| ||||||    
T  30173732 gtcggacatgtgtcgtgtccgatacggacacgacaccgacacttgtaattacactgagttatgt 30173795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 51410120 - 51410073
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||| ||||    
T  51410120 attaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacac 51410073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 6332740 - 6332694
Alignment:
Q  210 cgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||| |||||||||||| | ||||||||| ||||||||||||||    
T  6332740 cgacaccaacacgacaccgatacttgtaattacactgaattatgtga 6332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 24577183 - 24577221
Alignment:
Q  218 acacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  24577183 acacgacaccgacacttgtaattacactgaattatgtga 24577221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 32461417 - 32461498
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  | ||||| |||||||||| ||||||||||| |||| ||||| ||| ||||||||| | | ||||||||||    
T  32461417 attaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaattatgtga 32461498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 15323263 - 15323222
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacac 215  Q
    |||||| |||||||||||||||||||||||||| ||| ||||    
T  15323263 attaggtgtgtttcggtgtcggacacgtgtcatatccaacac 15323222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 22515828 - 22515898
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||||| ||||| |||| ||  ||||||||| ||||||||||| | ||||| ||||||||||| ||||    
T  22515828 tatgaagcacggacactcctcggat--taggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacac 22515898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 46348426 - 46348478
Alignment:
Q  268 aaattattagttgtgtcggcgtatcaatgttcgatgtccgtatccgtgcttcat 321  Q
    |||||||||| ||||||||||| ||| ||| || ||||||||||||||||||||    
T  46348426 aaattattagctgtgtcggcgtgtcagtgtccg-tgtccgtatccgtgcttcat 46348478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 5376485 - 5376533
Alignment:
Q  206 tgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    ||||||||| | |||||||||||||| || |||||| ||||||||||||    
T  5376485 tgtccgacatcgacacgacaccgacacttttaattacactgaattatgt 5376533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 27471532 - 27471600
Alignment:
Q  187 cggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtg 255  Q
    |||||||||||||||||| | ||| ||||| | | |||||| |||  |||||||| |||||||||||||    
T  27471532 cggtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtg 27471600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 46940749 - 46940798
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacg 200  Q
    ||||||||||||||||| |||| ||  |||||||||| ||||||||||||||    
T  46940749 tatgaagcacgaacactcctcggat--taggcgtgttccggtgtcggacacg 46940798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 30982831 - 30982913
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  |||||||||||||||||| |||| |||||| |||||||||||||| || |||||| |||||| |||||||    
T  30982831 attaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtga 30982913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 19482797 - 19482692
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||||||||| |||| ||  |||| ||||  | |||||||||||||||| ||||| | ||| |||||||||| ||| ||||||||| || |||    
T  19482797 tatgaagcacgaacactcctcggat--taggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaa 19482700  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  19482699 ttatgtga 19482692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 19312441 - 19312359
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||| ||||| ||||||||||||||||||| | ||||||| | |||||||||||| | || |||||| ||||||| ||||||    
T  19312441 attagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatcatgtga 19312359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 34306745 - 34306815
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||||||||| | |||  | ||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  34306745 tatgaagcacgaacattcctc--agattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 34306815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 15724507 - 15724563
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgac 230  Q
    ||||||||||||| |||||| |||||||||  ||||||||||| |||||||||||||    
T  15724507 attaggcgtgttttggtgtctgacacgtgttgtgtccgacaccgacacgacaccgac 15724563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 22234857 - 22234925
Alignment:
Q  188 ggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||||||||||||||| |||| |||||| ||||||||||||||  |  ||||| ||||||||||||||    
T  22234857 ggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtga 22234925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 21945598 - 21945551
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    |||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  21945598 attaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacac 21945551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 23292927 - 23292997
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||||| ||||| |||| ||  |||||||||  |||||||||||||||||| ||||||||||| ||||    
T  23292927 tatgaagcacggacactcctcggat--taggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 23292997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 30838315 - 30838238
Alignment:
Q  175 ttaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattat 252  Q
    |||||||||| | |||||||||||||||||  |||||||||  |||||||||||| | || |||||| ||| ||||||    
T  30838315 ttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattat 30838238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 848057 - 847977
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgt 254  Q
    |||||| ||||  ||||||  ||||||| || ||||||||||| ||| |||||||||| ||||||||| | ||||||||||    
T  848057 attaggtgtgtcccggtgttcgacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaattatgt 847977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 24613668 - 24613736
Alignment:
Q  188 ggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||| |||||||||| |||| |||||| ||| |||||||||| ||||| ||| | ||||||||||||    
T  24613668 ggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtga 24613736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 38148680 - 38148760
Alignment:
Q  176 taggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||| | ||||| || ||||||| ||||| ||||| |||||||| ||||| ||  ||||| ||||||||||||||    
T  38148680 taggcgtgttccagtgtcagatacgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtga 38148760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 27706130 - 27706212
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||  |||| ||||| ||||||| |||||||||   |||||||||  ||| ||||||||| ||| ||||||||||    
T  27706130 attaggcgtgtcccggtatcggatacgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtga 27706212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 4383436 - 4383391
Alignment:
Q  211 gacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||| ||||||||| |||| ||||||||| ||||||||||||||    
T  4383436 gacaccgacacgacactgacatttgtaattacactgaattatgtga 4383391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 24543997 - 24543944
Alignment:
Q  268 aaattattagttgtgtcggcgtatcaatgttcgatgtccgtatccgtgcttcat 321  Q
    |||||||||||||||||||||| ||| |||  | ||||||||||| ||||||||    
T  24543997 aaattattagttgtgtcggcgtgtcagtgtctggtgtccgtatccatgcttcat 24543944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 53490724 - 53490784
Alignment:
Q  181 gtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaatta 241  Q
    |||||||||||| |||||  |||| ||||||||||| |||||| || |||| |||||||||    
T  53490724 gtgtttcggtgttggacatttgtcgtgtccgacaccgacacgatactgacacttgtaatta 53490784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 8565 - 8670
Alignment:
Q  149 tatgaagcacgaacactgctcgtatattaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaa 248  Q
    ||||||||||| ||||| |||| ||  |||||||||  | ||||||||||||| || ||||||| ||| |||||||||||||| ||||||||| || |||    
T  8565 tatgaagcacggacactcctcgaat--taggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccgaa 8662  T
Q  249 ttatgtga 256  Q
    ||||||||    
T  8663 ttatgtga 8670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 3034 - 2952
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||| |||||||| ||||||||| |||| || ||| ||||||||| || | ||||||||| ||| ||||||||||    
T  3034 attaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaattatgtga 2952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 71831 - 71749
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    ||||| |||||  |||||||||||||||||  ||||||||||| ||||||||| |||| | ||||||| |||||||| |||||    
T  71831 attagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaattgtgtga 71749  T

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Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 263325 - 263406
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtg 255  Q
    ||||||||||| | ||| ||| ||||||||| |||| |||||| ||||||||| |||| || |||||| |||||||||||||    
T  263325 attaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtg 263406  T

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Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 8893 - 8846
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacctacac 221  Q
    ||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  8893 attaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 8846  T

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Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 14622 - 14580
Alignment:
Q  174 attaggcgtgtttcggtgtcggacacgtgtcatgtccgacacc 216  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  14622 attaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc 14580  T

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Target: scaffold0123 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 44493 - 44560
Alignment:
Q  189 gtgtcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||||||  ||||| ||||| |||||| |||||||  | |||||| ||||||||||||||    
T  44493 gtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtga 44560  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 23832 - 23794
Alignment:
Q  218 acacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtga 23794  T

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Target: scaffold0171 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 23599 - 23535
Alignment:
Q  192 tcggacacgtgtcatgtccgacacctacacgacaccgacaattgtaattagactgaattatgtga 256  Q
    |||||||| | || ||||||||||| | ||||||| |||| || |||||| ||||||||||||||    
T  23599 tcggacacatatcgtgtccgacaccgaaacgacactgacacttataattacactgaattatgtga 23535  T

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