View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17981_low_14 (Length: 347)

Name: NF17981_low_14
Description: NF17981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17981_low_14
NF17981_low_14
[»] chr4 (39 HSPs)
chr4 (13-332)||(41036906-41037225)
chr4 (129-212)||(6218441-6218524)
chr4 (129-215)||(22231072-22231158)
chr4 (129-243)||(22863445-22863559)
chr4 (129-215)||(35788658-35788744)
chr4 (131-215)||(28245527-28245611)
chr4 (129-215)||(12869028-12869114)
chr4 (129-214)||(35796741-35796826)
chr4 (131-243)||(400566-400678)
chr4 (131-215)||(21498353-21498437)
chr4 (131-215)||(53814675-53814759)
chr4 (131-217)||(9685629-9685715)
chr4 (129-215)||(17111767-17111853)
chr4 (129-215)||(22845446-22845532)
chr4 (129-215)||(34358029-34358115)
chr4 (129-215)||(35788893-35788979)
chr4 (129-215)||(52559566-52559652)
chr4 (126-215)||(21498794-21498883)
chr4 (192-249)||(44249078-44249135)
chr4 (167-215)||(11036783-11036831)
chr4 (131-215)||(20821972-20822056)
chr4 (129-217)||(50543329-50543417)
chr4 (129-212)||(5398475-5398557)
chr4 (129-240)||(18528456-18528567)
chr4 (131-217)||(5846143-5846229)
chr4 (174-248)||(11056376-11056450)
chr4 (129-215)||(22827537-22827623)
chr4 (165-215)||(27634116-27634166)
chr4 (171-217)||(35645806-35645852)
chr4 (129-215)||(39902562-39902648)
chr4 (129-215)||(50543566-50543652)
chr4 (129-215)||(53828522-53828608)
chr4 (131-212)||(9685400-9685481)
chr4 (131-216)||(14783188-14783273)
chr4 (165-214)||(28246120-28246169)
chr4 (143-184)||(30529939-30529980)
chr4 (172-249)||(33107835-33107912)
chr4 (171-248)||(44118900-44118977)
chr4 (198-246)||(8362602-8362650)
[»] scaffold0766 (1 HSPs)
scaffold0766 (133-243)||(6245-6355)
[»] chr7 (37 HSPs)
chr7 (135-217)||(2401357-2401439)
chr7 (129-220)||(36276990-36277081)
chr7 (127-217)||(33996076-33996166)
chr7 (131-215)||(26562074-26562158)
chr7 (127-214)||(31892387-31892474)
chr7 (134-217)||(32278889-32278972)
chr7 (129-215)||(25620135-25620221)
chr7 (129-243)||(36277225-36277339)
chr7 (133-217)||(3520042-3520127)
chr7 (129-234)||(23796022-23796126)
chr7 (128-217)||(48243059-48243148)
chr7 (129-213)||(40746032-40746116)
chr7 (129-215)||(21821805-21821891)
chr7 (129-215)||(21861528-21861614)
chr7 (163-249)||(24612762-24612848)
chr7 (131-212)||(36206064-36206145)
chr7 (131-215)||(29469604-29469688)
chr7 (131-215)||(34027392-34027476)
chr7 (129-209)||(40898921-40899001)
chr7 (131-215)||(48661556-48661640)
chr7 (132-215)||(3392981-3393064)
chr7 (149-248)||(23839096-23839195)
chr7 (129-215)||(4886328-4886414)
chr7 (129-215)||(14540740-14540826)
chr7 (129-215)||(21054952-21055038)
chr7 (129-215)||(21861293-21861379)
chr7 (128-206)||(23794354-23794432)
chr7 (131-217)||(31257032-31257118)
chr7 (129-222)||(3038083-3038176)
chr7 (165-222)||(4454768-4454825)
chr7 (129-234)||(23796183-23796288)
chr7 (165-214)||(31892151-31892200)
chr7 (129-214)||(42985122-42985207)
chr7 (162-210)||(8075863-8075911)
chr7 (173-217)||(26239959-26240003)
chr7 (131-215)||(29469839-29469923)
chr7 (129-217)||(37923248-37923336)
[»] chr1 (31 HSPs)
chr1 (129-214)||(4112539-4112624)
chr1 (129-215)||(855980-856066)
chr1 (129-211)||(27413350-27413432)
chr1 (129-211)||(41035826-41035908)
chr1 (131-248)||(40316051-40316168)
chr1 (129-217)||(38733149-38733236)
chr1 (131-217)||(3169763-3169849)
chr1 (129-215)||(4113005-4113091)
chr1 (129-215)||(40079151-40079237)
chr1 (127-243)||(42586436-42586551)
chr1 (172-243)||(7652289-7652359)
chr1 (170-225)||(7826071-7826126)
chr1 (129-243)||(15986332-15986446)
chr1 (129-215)||(17452827-17452913)
chr1 (129-243)||(32783280-32783393)
chr1 (131-217)||(51589803-51589889)
chr1 (132-222)||(52961574-52961664)
chr1 (131-215)||(17452680-17452764)
chr1 (129-217)||(25145484-25145572)
chr1 (165-216)||(26173259-26173310)
chr1 (129-215)||(2859391-2859477)
chr1 (171-217)||(25713390-25713436)
chr1 (129-215)||(27413581-27413667)
chr1 (129-215)||(35772263-35772349)
chr1 (129-206)||(8749946-8750023)
chr1 (177-222)||(13382454-13382499)
chr1 (165-214)||(16163167-16163216)
chr1 (128-217)||(38733379-38733468)
chr1 (174-222)||(9499238-9499286)
chr1 (165-217)||(28408077-28408129)
chr1 (129-249)||(49142473-49142593)
[»] chr5 (35 HSPs)
chr5 (131-215)||(20225040-20225124)
chr5 (129-215)||(24346500-24346586)
chr5 (129-215)||(24531598-24531684)
chr5 (129-215)||(41666756-41666842)
chr5 (129-215)||(41666992-41667078)
chr5 (165-249)||(15438842-15438926)
chr5 (129-217)||(15480319-15480407)
chr5 (129-217)||(24528537-24528625)
chr5 (149-248)||(170570-170669)
chr5 (129-248)||(1564566-1564685)
chr5 (129-212)||(17352667-17352750)
chr5 (129-216)||(38731837-38731924)
chr5 (129-215)||(17352434-17352520)
chr5 (129-215)||(24269870-24269955)
chr5 (170-215)||(2061978-2062023)
chr5 (129-214)||(6919428-6919512)
chr5 (127-222)||(18333462-18333557)
chr5 (165-215)||(95301-95351)
chr5 (129-215)||(3859307-3859393)
chr5 (165-215)||(6413461-6413511)
chr5 (129-183)||(38731602-38731656)
chr5 (129-215)||(43117881-43117967)
chr5 (132-213)||(24647697-24647778)
chr5 (172-217)||(37782092-37782137)
chr5 (129-217)||(2063733-2063820)
chr5 (171-215)||(4481604-4481648)
chr5 (165-213)||(7607595-7607643)
chr5 (127-207)||(12034697-12034777)
chr5 (129-217)||(13296889-13296977)
chr5 (160-248)||(17899490-17899578)
chr5 (131-215)||(21209922-21210006)
chr5 (129-217)||(21306884-21306972)
chr5 (129-217)||(21314722-21314810)
chr5 (131-215)||(27132994-27133078)
chr5 (165-217)||(38976930-38976982)
[»] chr2 (34 HSPs)
chr2 (131-247)||(10522986-10523102)
chr2 (128-249)||(13764314-13764435)
chr2 (129-217)||(16419499-16419587)
chr2 (129-243)||(25082536-25082650)
chr2 (131-208)||(40149004-40149081)
chr2 (172-217)||(42639656-42639701)
chr2 (127-215)||(5711436-5711524)
chr2 (129-223)||(9927902-9927996)
chr2 (126-215)||(36351921-36352011)
chr2 (165-215)||(37812303-37812353)
chr2 (129-215)||(40379208-40379294)
chr2 (129-215)||(40379443-40379529)
chr2 (134-215)||(2324473-2324554)
chr2 (129-222)||(36352158-36352251)
chr2 (129-217)||(11020555-11020643)
chr2 (165-217)||(17525373-17525425)
chr2 (131-215)||(19191611-19191695)
chr2 (129-249)||(19570973-19571093)
chr2 (129-215)||(5851680-5851767)
chr2 (129-215)||(2029768-2029854)
chr2 (129-215)||(2030003-2030089)
chr2 (135-217)||(2324237-2324319)
chr2 (165-215)||(17719399-17719449)
chr2 (129-215)||(19544370-19544455)
chr2 (137-215)||(32884106-32884184)
chr2 (165-215)||(37812533-37812583)
chr2 (129-190)||(10570994-10571055)
chr2 (150-215)||(16533546-16533611)
chr2 (131-184)||(27897504-27897557)
chr2 (131-215)||(17854693-17854777)
chr2 (128-192)||(19544134-19544198)
chr2 (130-217)||(21591778-21591866)
chr2 (127-215)||(24666230-24666317)
chr2 (131-215)||(36316052-36316136)
[»] chr6 (36 HSPs)
chr6 (128-223)||(7638846-7638941)
chr6 (131-215)||(21690721-21690805)
chr6 (128-215)||(4868575-4868662)
chr6 (131-217)||(12330180-12330266)
chr6 (129-215)||(17147659-17147745)
chr6 (127-217)||(25065091-25065181)
chr6 (173-248)||(32993474-32993549)
chr6 (129-211)||(4868812-4868894)
chr6 (131-217)||(12330292-12330377)
chr6 (131-217)||(13740678-13740764)
chr6 (131-217)||(13746178-13746264)
chr6 (129-215)||(19639112-19639198)
chr6 (135-212)||(12329949-12330026)
chr6 (130-243)||(30256549-30256662)
chr6 (127-215)||(2736164-2736252)
chr6 (129-221)||(3680005-3680097)
chr6 (131-215)||(8026388-8026472)
chr6 (131-215)||(27772713-27772797)
chr6 (129-220)||(9705014-9705105)
chr6 (129-212)||(9705256-9705339)
chr6 (128-215)||(19712951-19713038)
chr6 (150-248)||(20830715-20830814)
chr6 (165-223)||(30505728-30505787)
chr6 (129-211)||(5648671-5648753)
chr6 (129-243)||(6542708-6542821)
chr6 (131-217)||(8566960-8567045)
chr6 (129-215)||(13353200-13353286)
chr6 (129-215)||(33796325-33796411)
chr6 (148-209)||(501791-501851)
chr6 (165-222)||(6542978-6543035)
chr6 (165-222)||(24554109-24554166)
chr6 (173-217)||(3680243-3680287)
chr6 (148-248)||(3823270-3823370)
chr6 (129-217)||(11721902-11721990)
chr6 (131-215)||(27653216-27653300)
chr6 (131-215)||(30256812-30256895)
[»] scaffold0129 (1 HSPs)
scaffold0129 (129-217)||(14300-14388)
[»] chr8 (38 HSPs)
chr8 (129-217)||(12317043-12317131)
chr8 (173-249)||(29907769-29907845)
chr8 (128-215)||(15042668-15042755)
chr8 (173-248)||(28213364-28213439)
chr8 (129-215)||(39052928-39053014)
chr8 (129-246)||(37001432-37001549)
chr8 (127-215)||(5931946-5932034)
chr8 (172-248)||(5940024-5940100)
chr8 (129-217)||(12547096-12547183)
chr8 (131-215)||(17469817-17469901)
chr8 (131-215)||(17477064-17477148)
chr8 (128-215)||(35682779-35682866)
chr8 (129-215)||(24532420-24532506)
chr8 (129-215)||(41790658-41790743)
chr8 (129-214)||(20301261-20301346)
chr8 (129-214)||(21087893-21087978)
chr8 (129-245)||(5675733-5675849)
chr8 (129-209)||(10614938-10615018)
chr8 (129-217)||(11232428-11232516)
chr8 (131-215)||(19256587-19256671)
chr8 (131-215)||(39743528-39743612)
chr8 (131-214)||(4828068-4828151)
chr8 (131-222)||(5590369-5590460)
chr8 (129-215)||(10449999-10450085)
chr8 (129-215)||(11232193-11232279)
chr8 (129-215)||(29005863-29005949)
chr8 (165-223)||(29099775-29099833)
chr8 (165-215)||(38447462-38447512)
chr8 (130-215)||(8929016-8929101)
chr8 (129-206)||(18939296-18939373)
chr8 (173-217)||(7669638-7669682)
chr8 (165-249)||(7729906-7729990)
chr8 (172-220)||(8084121-8084169)
chr8 (129-209)||(8849429-8849508)
chr8 (129-225)||(12688061-12688157)
chr8 (131-215)||(19256821-19256905)
chr8 (131-215)||(24075307-24075391)
chr8 (172-248)||(37868625-37868701)
[»] scaffold0092 (1 HSPs)
scaffold0092 (127-214)||(5890-5977)
[»] chr3 (28 HSPs)
chr3 (148-219)||(23708242-23708313)
chr3 (148-219)||(23726698-23726769)
chr3 (148-219)||(23745154-23745225)
chr3 (148-219)||(24063679-24063750)
chr3 (129-215)||(16239590-16239676)
chr3 (129-211)||(31317232-31317313)
chr3 (128-214)||(31317466-31317552)
chr3 (127-215)||(35038191-35038279)
chr3 (129-217)||(39269328-39269416)
chr3 (128-215)||(4155558-4155645)
chr3 (148-219)||(23691442-23691513)
chr3 (174-217)||(33640278-33640321)
chr3 (130-249)||(45828211-45828330)
chr3 (129-215)||(1723075-1723161)
chr3 (129-215)||(20303063-20303149)
chr3 (129-215)||(54368515-54368601)
chr3 (129-215)||(54567891-54567977)
chr3 (129-222)||(22729092-22729185)
chr3 (131-215)||(11589784-11589868)
chr3 (129-184)||(15019515-15019570)
chr3 (129-184)||(37246666-37246721)
chr3 (165-215)||(3975393-3975443)
chr3 (129-215)||(16926948-16927034)
chr3 (131-217)||(17001422-17001508)
chr3 (131-215)||(39683268-39683353)
chr3 (165-222)||(45138837-45138894)
chr3 (135-215)||(20327619-20327699)
chr3 (131-215)||(20327850-20327934)
[»] scaffold0692 (1 HSPs)
scaffold0692 (129-220)||(5753-5844)
[»] scaffold0481 (1 HSPs)
scaffold0481 (165-214)||(3506-3555)
[»] scaffold0519 (2 HSPs)
scaffold0519 (129-217)||(1913-2001)
scaffold0519 (128-215)||(2150-2237)
[»] scaffold0041 (1 HSPs)
scaffold0041 (129-209)||(67283-67363)
[»] scaffold0334 (1 HSPs)
scaffold0334 (132-215)||(4431-4514)
[»] scaffold0048 (1 HSPs)
scaffold0048 (129-215)||(81841-81927)
[»] scaffold0005 (1 HSPs)
scaffold0005 (131-216)||(56457-56542)


Alignment Details
Target: chr4 (Bit Score: 276; Significance: 1e-154; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 13 - 332
Target Start/End: Original strand, 41036906 - 41037225
Alignment:
Q  13 aatattaactttgcatactccaaaatgattacatgtttagattggcggtgtgattgtgaaaatcaaattaaatttacaaaaactatattatgaagtttta 112  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41036906 aatattaactttgcataccccagaatgattacatgtttagattggcggtgtgattgtgaaaatcaaatgaaatttacaaaaactatattatgaagtttta 41037005  T
Q  113 tcaagatcactcggattcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgt 212  Q
     |||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  41037006 acaagatcactcggatttttagaaatcgtagttgagcttaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacactgt 41037105  T
Q  213 cagactatcttttgtcagatgtaagactctttaacacgaacaccggttatctaaagatggattattcatcccgaacatattcaccatcaataacaacgtg 312  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41037106 cagactatcttttatccgatgtaagactctttaacacgaacaccggttatctaaagatgcattattcatcccgaacatattcaccatcaataacaacgtg 41037205  T
Q  313 aataatcagttcacccaact 332  Q
    ||||||||||||||||||||    
T  41037206 aataatcagttcacccaact 41037225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 6218524 - 6218441
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgt 212  Q
    ||||||||||||| ||||| ||||||| |||  ||||||| ||||||||||||||| ||||| ||||  |||||||||||||||    
T  6218524 tcttagaaatcgtggttgagcctaacacaattccataaaaccggcttgtgaggtgatgattgcccccacttataaacacattgt 6218441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 22231072 - 22231158
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| |||| |||||| | || | || |||| ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  22231072 tcttagaaatcgtggttggacctaatacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataaacacattgtcag 22231158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 243
Target Start/End: Complemental strand, 22863559 - 22863445
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||| ||||| ||||| ||||  |||||||||||||||||| | ||||| ||||    
T  22863559 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttataaacacattgtcaggccatcttctgtc 22863460  T
Q  229 agatgtaagactctt 243  Q
     ||||| ||||||||    
T  22863459 cgatgtgagactctt 22863445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 35788744 - 35788658
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | ||||||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  35788744 tcttagaaatcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 35788658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 28245527 - 28245611
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  28245527 ttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 28245611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 12869028 - 12869114
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||||||| | ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  12869028 tcttagaaatcgtagtttagcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacaaattgtcag 12869114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 35796741 - 35796826
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    |||||||||| || |||| || ||||| || |||| |||| ||||||||||||||| ||||| ||||  |||||||||||||||||    
T  35796741 tcttagaaatggtggttggacttaacacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtca 35796826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 400566 - 400678
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcag 230  Q
    |||||||| || ||||| | ||||| || |||| |||| ||||||||||||||| ||||  ||||  |||||||||||||||||||| ||||  | || |    
T  400566 ttagaaattgtggttgagcttaacacaacctcacaaaaccggcttgtgaggtgaggatttcccccacttataaacacattgtcagaccatctcatatctg 400665  T
Q  231 atgtaagactctt 243  Q
    |||| ||||||||    
T  400666 atgtgagactctt 400678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 21498437 - 21498353
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  |||||||||| | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  21498437 ttagaaatcgtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 21498353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 53814675 - 53814759
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| |||| || |||| ||||||||||||||| |||| |||||  ||||||||| ||||||||    
T  53814675 ttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggattatccccacttataaacaaattgtcag 53814759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 9685715 - 9685629
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||| ||||  ||||||| || | ||||||| ||||||||||||||| ||||| ||||  ||||||||| ||||| ||||    
T  9685715 ttagaaatcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgttagac 9685629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 17111853 - 17111767
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||| || |||| |||||||| || |||||||||||||||| ||| |||| || |  ||||  ||||||||||||||||||    
T  17111853 tcttagaaattgtggttggacctaacacaacctcataaaatcggcttttgaagtgatgaataaccccacttataaacacattgtcag 17111767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 22845446 - 22845532
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||  ||||  ||||||||||||||||||    
T  22845446 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacattgtcag 22845532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 34358029 - 34358115
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||||||  |||| ||||||| || | || |||| |||||| ||| |||| ||||| |||| |||||||||||||||||||    
T  34358029 tcttagaaatcgtgtttgagcctaacacaaccccacaaaaccggcttctgatgtgaggattgcccccatttataaacacattgtcag 34358115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 35788979 - 35788893
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||| ||| ||||| ||||  ||||||||||||||||||    
T  35788979 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgcccccacttataaacacattgtcag 35788893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 52559652 - 52559566
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| | ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  52559652 tcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacacattgtcag 52559566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 21498883 - 21498794
Alignment:
Q  126 gattcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||| ||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  21498883 gattattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 21498794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 44249135 - 44249078
Alignment:
Q  192 ccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaacac 249  Q
    ||||| |||||||||||||||||||| ||||||| || |||||| |||| ||||||||    
T  44249135 ccccgcttataaacacattgtcagaccatcttttatccgatgtaggactatttaacac 44249078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 11036783 - 11036831
Alignment:
Q  167 aatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  11036783 aatcggcttgtgaggtgaggattgcccccacttataaacacattgtcag 11036831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 20822056 - 20821972
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| |||| || |||| |||||||||||||||  |||| ||||  ||||||||| ||||||||    
T  20822056 ttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgagaattgcccccacttataaacaaattgtcag 20821972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 50543329 - 50543417
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||| ||||| ||||| ||||  ||||| ||||||||||||||    
T  50543329 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttatacacacattgtcagac 50543417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 5398475 - 5398557
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgt 212  Q
    ||||||||||| | |||| |||||||| || | || |||| ||||||||||||||| ||||| ||||  |||||||||||||||    
T  5398475 tcttagaaatcatggttggacctaacacaaccccacaaaaccggcttgtgaggtgaggattg-ccccagttataaacacattgt 5398557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 18528456 - 18528567
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    ||||||||||||| ||||   |||||| ||||||| |||| ||  ||||||||||| ||||| ||||  || | |||||||||||| |||||||  ||||    
T  18528456 tcttagaaatcgtggttgggtctaacaaaatctcacaaaaccgatttgtgaggtgaggattgcccccaattgttaacacattgtcacactatctcctgtc 18528555  T
Q  229 agatgtaagact 240  Q
     ||||| |||||    
T  18528556 cgatgtgagact 18528567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 5846229 - 5846143
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||| ||||| ||||||  || | || |||| |||||| |||||||| ||||| ||||  ||||||||| ||||||||||    
T  5846229 ttagaaatcgtggttgagcctaacgcaaccccacaaaaccggcttatgaggtgaggattgcccccacttataaacaaattgtcagac 5846143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 11056376 - 11056450
Alignment:
Q  174 ttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaaca 248  Q
    |||||||| ||||||||  |||  ||||||||||||  |||||| ||||||| ||| |||| |||||||||||||    
T  11056376 ttgtgaggcgaagattgctcccacttataaacacatgttcagacaatcttttatcaaatgtgagactctttaaca 11056450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 22827623 - 22827537
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || |  | |||| ||||||||||||||| ||||| ||||  |||||||||| |||||||    
T  22827623 tcttagaaatcgtggttgggcctaacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaacacgttgtcag 22827537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 27634116 - 27634166
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||| ||||||||||| ||||| ||||  ||||||||||||||||||    
T  27634116 aaaatcggtttgtgaggtgaggattgcccccacttataaacacattgtcag 27634166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 35645806 - 35645852
Alignment:
Q  171 ggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    |||||||||||||| ||||| ||||  ||||||||||||||||||||    
T  35645806 ggcttgtgaggtgaggattgcccccacttataaacacattgtcagac 35645852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 39902562 - 39902648
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||| || ||||  ||||||| || | || |||| | ||||||||||||| ||||| ||||  ||||||||||||||||||    
T  39902562 tcttagaaatggtggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacacattgtcag 39902648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 50543566 - 50543652
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| ||   || |||| ||||||||||||||| ||||| ||||  ||||| ||||||||||||    
T  50543566 tcttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttatacacacattgtcag 50543652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 53828522 - 53828608
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||| || ||||  ||||||| || | || ||||||||||| |||||||| ||||| ||||  ||||||||| ||||||||    
T  53828522 tcttagaaattgtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgcccccacttataaacaaattgtcag 53828608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 9685481 - 9685400
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgt 212  Q
    ||||||||||| ||||  ||||||| || |||| |||| || |||||||||||| ||||| ||||  ||||||||| |||||    
T  9685481 ttagaaatcgtggttgggcctaacacaacctcacaaaaccgacttgtgaggtgaggattggccccacttataaacaaattgt 9685400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 14783188 - 14783273
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcaga 216  Q
    ||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| || |  ||||||||| |||||||||    
T  14783188 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccacagttataaacaaattgtcaga 14783273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 28246120 - 28246169
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    |||| ||||||||||||||| ||||| ||||  |||||||||||||||||    
T  28246120 aaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtca 28246169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 30529939 - 30529980
Alignment:
Q  143 gttgaacctaacataatctcataaaatcggcttgtgaggtga 184  Q
    ||||| ||||||| |||||||||||| |||||||||||||||    
T  30529939 gttgagcctaacacaatctcataaaaccggcttgtgaggtga 30529980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 33107912 - 33107835
Alignment:
Q  172 gcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaacac 249  Q
    ||||||||||||||||||||| ||  ||||||||||||  | |||| ||| |||||| |||| |  ||||||||||||    
T  33107912 gcttgtgaggtgaagattgtctccacttataaacacatgttaagaccatcatttgtccgatgcagaactctttaacac 33107835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 44118900 - 44118977
Alignment:
Q  171 ggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaaca 248  Q
    |||||||||||||| ||||  ||||  |||||||||||||||||| | |||| || || |||||  ||||||||||||    
T  44118900 ggcttgtgaggtgaggattacccccacttataaacacattgtcaggccatctcttatccgatgtgggactctttaaca 44118977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 8362602 - 8362650
Alignment:
Q  198 ttataaacacattgtcagactatcttttgtcagatgtaagactctttaa 246  Q
    ||||||||||||  ||||||||||||||||| ||||| ||||| |||||    
T  8362602 ttataaacacatgttcagactatcttttgtccgatgtgagactatttaa 8362650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 6355 - 6245
Alignment:
Q  133 agaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagat 232  Q
    ||||||||| ||||  ||||||| || | || |||||||||||||||||||| ||||| ||||  ||||||||||||||||||||||||| || || |||    
T  6355 agaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacacattgtcagactatctcttatctgat 6256  T
Q  233 gtaagactctt 243  Q
    ||  |||||||    
T  6255 gtgggactctt 6245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 2401439 - 2401357
Alignment:
Q  135 aaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||| ||||| ||||||| ||||||| ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||    
T  2401439 aaatcgtggttgagcctaacacaatctcacaaaatcgacttgtgaagtgaagattgtccacacttataaacacattgtcagac 2401357  T

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Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 36276990 - 36277081
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactat 220  Q
    ||||||||||||| |||   ||||||| |||| ||||||| | |||||||||||||  |||||||||  |||||||||||||||||||||||    
T  36276990 tcttagaaatcgtggttaggcctaacacaatcccataaaacctgcttgtgaggtgagaattgtccccacttataaacacattgtcagactat 36277081  T

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Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 33996076 - 33996166
Alignment:
Q  127 attcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||| ||||||| ||||||||||| | ||   |||||||| |||||||||||||| ||||||||||   |||||||||||||||||||    
T  33996076 attcttaaaaatcgtggttgaacctaatacaactccataaaatgggcttgtgaggtgaggattgtccccacgtataaacacattgtcagac 33996166  T

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Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 26562074 - 26562158
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||| || ||||| |||||||||| | || |||| ||||||||||||||||||||| ||||  ||||||||| ||||||||    
T  26562074 ttagaaatggtggttgagcctaacataaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaacaaattgtcag 26562158  T

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Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 214
Target Start/End: Complemental strand, 31892474 - 31892387
Alignment:
Q  127 attcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    ||||||||||||||| ||||  ||||||| |  | || |||| ||||||||||||||||||||||||||  ||||||| |||||||||    
T  31892474 attcttagaaatcgtggttgggcctaacacatccccacaaaaccggcttgtgaggtgaagattgtccccacttataaatacattgtca 31892387  T

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Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 32278889 - 32278972
Alignment:
Q  134 gaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||| || ||||| ||||||| || |||| |||| |||||| |||||||| ||||||||||  ||||||||||||||||||||    
T  32278889 gaaatggtggttgagcctaacacaacctcacaaaaccggcttatgaggtgacgattgtccccacttataaacacattgtcagac 32278972  T

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Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 25620221 - 25620135
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  25620221 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 25620135  T

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Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 36277225 - 36277339
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    ||||||||||||| ||||   |||||| || | || ||||||| |||||||||||| ||||| ||||  |||||||||||||||||| | || | |||||    
T  36277225 tcttagaaatcgtggttgggactaacacaaccccacaaaatcgacttgtgaggtgaggattgcccccacttataaacacattgtcaggccatgtcttgtc 36277324  T
Q  229 agatgtaagactctt 243  Q
     ||||| ||||||||    
T  36277325 cgatgtgagactctt 36277339  T

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Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 3520042 - 3520127
Alignment:
Q  133 agaaatcgtagttgaacctaacataatc-tcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||| ||||||||||||| || | | |||||| ||||||| ||||||| ||||| ||||  ||||||||||||||||||||    
T  3520042 agaaatcgtggttgaacctaacacaacccttataaaaccggcttgcgaggtgaggattgcccccacttataaacacattgtcagac 3520127  T

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Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 23796022 - 23796126
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    ||||| ||||| | ||||| ||||||| |  | ||||||||||||||||||||||| ||||| ||||  |||||||| | ||||||||| ||||||||||    
T  23796022 tcttaaaaatcatggttgagcctaacacatccccataaaatcggcttgtgaggtgaggattg-ccccacttataaacccgttgtcagaccatcttttgtc 23796120  T
Q  229 agatgt 234  Q
     |||||    
T  23796121 cgatgt 23796126  T

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Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 48243059 - 48243148
Alignment:
Q  128 ttcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    |||||| ||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||||    
T  48243059 ttcttacaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagac 48243148  T

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Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 40746032 - 40746116
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtc 213  Q
    |||||||||| || ||||   |||||| |||| || |||||||| |||||||||||||||||||||   ||||||||||||||||    
T  40746032 tcttagaaattgtggttgggtctaacacaatcccacaaaatcggtttgtgaggtgaagattgtcccttcttataaacacattgtc 40746116  T

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Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 21821891 - 21821805
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| |||| || |||||||| ||||||| ||||||||| ||||  |||| |||| ||||||||    
T  21821891 tcttagaaatcgtggttgggcctaacacaatcccacaaaatcggtttgtgagatgaagattgcccccacttattaacatattgtcag 21821805  T

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Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 21861614 - 21861528
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||| || ||||  ||||||| || | || ||||||||||||| |||||| ||||| ||||  ||||||||||||||||||    
T  21861614 tcttagaaatggtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgcccccacttataaacacattgtcag 21861528  T

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Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 24612848 - 24612762
Alignment:
Q  163 ataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaacac 249  Q
    |||||| || |||||||||||||||| |||| |  ||||||||||||  ||| || ||||||| || ||||| ||||||||||||||    
T  24612848 ataaaaccgtcttgtgaggtgaagatagtcctcacttataaacacatattcatacaatcttttatccgatgtgagactctttaacac 24612762  T

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Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 36206064 - 36206145
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgt 212  Q
    ||||||||||| ||||| ||||| | || | ||||||| ||||||||||||||||||||| | ||  ||||||||| |||||    
T  36206064 ttagaaatcgtggttgagcctaatacaaccccataaaaccggcttgtgaggtgaagattgcctccacttataaacaaattgt 36206145  T

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Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 29469688 - 29469604
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| || | || |||| |||||||| |||||| ||||| ||||  ||||||||||||||||||    
T  29469688 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 29469604  T

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Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 34027476 - 34027392
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  34027476 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 34027392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 40898921 - 40899001
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacat 209  Q
    |||||||| ||||  |||| ||||||| |||| ||||||| | ||||||||||||| ||||| ||||  ||||||||||||    
T  40898921 tcttagaattcgtgattgagcctaacacaatcccataaaaccagcttgtgaggtgatgattgcccccacttataaacacat 40899001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 48661556 - 48661640
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||   |||||| ||||||| |||| ||||||||||||||| ||||| ||||   |||||| ||||||||||    
T  48661556 ttagaaatcgtggttgggtctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacctataaatacattgtcag 48661640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 215
Target Start/End: Complemental strand, 3393064 - 3392981
Alignment:
Q  132 tagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||| || ||||  ||||||| || | || ||||||||||||||||||||  ||| |||||  ||||||||||||||||||    
T  3393064 tagaaatggtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgagaattttccccacttataaacacattgtcag 3392981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 23839096 - 23839195
Alignment:
Q  149 cctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaaca 248  Q
    ||||||| || |||| |||| ||||||||||||||| ||||  ||||  ||||||||| ||||| |||| |||| || || | ||| |||||||||||||    
T  23839096 cctaacacaacctcacaaaaccggcttgtgaggtgaggatttcccccacttataaacagattgttagaccatctcttatccgttgtgagactctttaaca 23839195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 4886414 - 4886328
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || |||   ||| ||||||||||||||| ||||| |||| || ||||||| ||||||||    
T  4886414 tcttagaaatcgtggttgggcctaacacaacctcgccaaaccggcttgtgaggtgaggattgcccccattaataaacatattgtcag 4886328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 14540740 - 14540826
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||| ||||||||| |||  || ||||| ||||||||| | || ||||||||    ||||||||||||||||||    
T  14540740 tcttagaaatcgtggttaaacctaacacaattccaaaaaattggcttgtgatgagaggattgtccttacttataaacacattgtcag 14540826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 21054952 - 21055038
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||| || ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  21054952 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacatattgtcag 21055038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 21861379 - 21861293
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||| || ||||  ||||||| |||| || |||| |||||||| |||||| ||||| || |  ||||||||||||||||||    
T  21861379 tcttagaaatggtggttgggcctaacacaatcccacaaaaccggcttgtaaggtgaggattgccctcacttataaacacattgtcag 21861293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 23794354 - 23794432
Alignment:
Q  128 ttcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaaca 206  Q
    |||||| ||||||| ||||| ||||||  |||| || ||||| |||||||||||||| ||||| | || ||||||||||    
T  23794354 ttcttaaaaatcgtggttgagcctaactcaatcccacaaaattggcttgtgaggtgaggattgccaccatttataaaca 23794432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 31257032 - 31257118
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||| |||||  |||||| || | || ||||  || ||||||||||||||||| ||||  ||||||||| ||||||||||    
T  31257032 ttagaaatcgtggttgagtctaacacaaccccacaaaactggtttgtgaggtgaagattgcccccacttataaacaaattgtcagac 31257118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 3038083 - 3038176
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatct 222  Q
    ||||||||||| | ||||  ||||||| || | || |||| |||||||||| |||| ||||| ||||  ||||||||||||||| |||| ||||    
T  3038083 tcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgacgtgaggattgcccccacttataaacacattgttagacaatct 3038176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 4454825 - 4454768
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatct 222  Q
    |||| ||| ||||||||||| ||||| ||||  |||||||||||||||||||| ||||    
T  4454825 aaaaccggtttgtgaggtgaggattgcccccacttataaacacattgtcagaccatct 4454768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 23796183 - 23796288
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    ||||| ||||| | ||||| ||||||| || | || ||||||   ||||||||||| ||||| ||||  ||||||||||||||| |||| ||||||| ||    
T  23796183 tcttaaaaatcatggttgagcctaacacaaccccacaaaatcaatttgtgaggtgatgattgcccccacttataaacacattgttagaccatcttttatc 23796282  T
Q  229 agatgt 234  Q
     |||||    
T  23796283 cgatgt 23796288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 31892200 - 31892151
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    |||| ||||||||||||||| ||||||||||  ||||||| |||||||||    
T  31892200 aaaaccggcttgtgaggtgaggattgtccccacttataaatacattgtca 31892151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 42985122 - 42985207
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    ||||||||||  | |||||  |||||| || |||| ||||||| |||||||||||| ||||| | ||  |||||||||||||||||    
T  42985122 tcttagaaattatggttgagtctaacacaacctcacaaaatcgacttgtgaggtgaggattgcctccacttataaacacattgtca 42985207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 8075911 - 8075863
Alignment:
Q  162 cataaaatcggcttgtgaggtgaagattgtccccgtttataaacacatt 210  Q
    ||||||| || ||||||||||||||||| |||||  |||||||||||||    
T  8075911 cataaaaccgacttgtgaggtgaagattatccccacttataaacacatt 8075863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 26239959 - 26240003
Alignment:
Q  173 cttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    |||||||||||| ||||| ||||  ||||||||||||||||||||    
T  26239959 cttgtgaggtgaggattgcccccacttataaacacattgtcagac 26240003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 29469923 - 29469839
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| ||   || |||| |||||||| |||||| ||||| ||||  ||||||||||||||||||    
T  29469923 ttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 29469839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 37923248 - 37923336
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| |||  | |||||| | | ||| |||| | | ||||||| ||| |||||||||  |||||||||||||||||||||    
T  37923248 tcttagaaatcgtggttagatctaacacagtttcacaaaaccagtttgtgagatgatgattgtccctatttataaacacattgtcagac 37923336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 4112539 - 4112624
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    ||||||||||||| ||||  ||||||| |||| ||||||||||||||||||||||| ||||| |||   |||||||||||||||||    
T  4112539 tcttagaaatcgtggttgtgcctaacacaatcccataaaatcggcttgtgaggtgatgattgcccctacttataaacacattgtca 4112624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 856066 - 855980
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||| ||||||||  ||||||| ||||||| |||| | ||||||||||||| ||||||||||   |||||||||||||||||    
T  856066 tcttagaaaacgtagttgggcctaacacaatctcacaaaaccagcttgtgaggtgaggattgtccccacgtataaacacattgtcag 855980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 27413432 - 27413350
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattg 211  Q
    ||||||||||||| |||| |||||||| || |||| |||||||||||||||||||| ||||||| ||  ||||| ||||||||    
T  27413432 tcttagaaatcgtggttggacctaacacaacctcacaaaatcggcttgtgaggtgaggattgtctccagttatacacacattg 27413350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 41035826 - 41035908
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattg 211  Q
    |||||||||||||||||| |||||||| |||| || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||    
T  41035826 tcttagaaatcgtagttggacctaacacaatcccacaaaaccggcttgtgaggtgaggattgcccccacttataaacatattg 41035908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 131 - 248
Target Start/End: Original strand, 40316051 - 40316168
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcag 230  Q
    ||||||||||| |||| | |||||| || |||| |||| |||||| |||||||| ||||| ||||  ||||||||||||  | |||  |||||||||| |    
T  40316051 ttagaaatcgtggttggatctaacacaacctcacaaaaccggcttatgaggtgaggattgaccccacttataaacacatgtttagaacatcttttgtccg 40316150  T
Q  231 atgtaagactctttaaca 248  Q
    ||||| ||||||||||||    
T  40316151 atgtatgactctttaaca 40316168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 38733236 - 38733149
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| ||||||||||||| ||||||| |||| || |||||||| |||  ||||| |||  ||||||||||||||||||||    
T  38733236 tcttagaaatcgtggttgaacctaacacaatctcacaaaaccgacttgtgagatgagaattgt-cccacttataaacacattgtcagac 38733149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 3169849 - 3169763
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||| ||||  ||||||| || | || |||| ||||||||||||||||||||| ||||  ||||||||| ||||||||||    
T  3169849 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaacaaattgtcagac 3169763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 4113005 - 4113091
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  4113005 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 4113091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 40079237 - 40079151
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  40079237 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 40079151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 42586436 - 42586551
Alignment:
Q  127 attcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttg 226  Q
    ||||||||||||||| ||||  ||||||| || | || ||||| |||||||||||||| ||||| ||||  ||||| |||||||||||| | |||| ||     
T  42586436 attcttagaaatcgtggttgggcctaacacaaccccacaaaattggcttgtgaggtgaggattg-ccccacttatatacacattgtcaggccatctctta 42586534  T
Q  227 tcagatgtaagactctt 243  Q
    || ||||| ||||||||    
T  42586535 tccgatgtgagactctt 42586551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 7652359 - 7652289
Alignment:
Q  172 gcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctt 243  Q
    |||| |||||||||||||| |||   |||||||||||||||||||| ||||||| || ||||||||||||||    
T  7652359 gcttatgaggtgaagattg-ccctacttataaacacattgtcagaccatcttttatccgatgtaagactctt 7652289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 7826071 - 7826126
Alignment:
Q  170 cggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatctttt 225  Q
    ||||||||||||| | ||||||||||  |||||||||||||||||||| |||||||    
T  7826071 cggcttgtgaggtaaggattgtccccacttataaacacattgtcagaccatctttt 7826126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 15986332 - 15986446
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    |||||||||| || |||| |||||||| || | || || | | ||||||||||||| ||||| ||||  |||||||||||||||||| ||||||  | ||    
T  15986332 tcttagaaatggtggttggacctaacacaaccccacaataccagcttgtgaggtgaggattgcccccacttataaacacattgtcaggctatctcctatc 15986431  T
Q  229 agatgtaagactctt 243  Q
     |||||| |||||||    
T  15986432 cgatgtaggactctt 15986446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 17452827 - 17452913
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| |||   ||||||| || | || |||| ||||||||||||||||||||| ||||  ||||||| ||||||||||    
T  17452827 tcttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaatacattgtcag 17452913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 32783280 - 32783393
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    ||||||||||||| |||| | |||||| |||  |||||||   ||||||||| ||||||||| ||||| ||||||||||| ||||| || |||| || ||    
T  32783280 tcttagaaatcgtggttggatctaacaaaattccataaaactagcttgtgagatgaagattgcccccgcttataaacaca-tgtcaaaccatctattatc 32783378  T
Q  229 agatgtaagactctt 243  Q
     ||||| ||||||||    
T  32783379 cgatgtgagactctt 32783393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 51589889 - 51589803
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||| ||||  ||||||| || | || |||||||||||||||||||| ||||| || |  ||||||||| ||||||||||    
T  51589889 ttagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccctcacttataaacaaattgtcagac 51589803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 52961664 - 52961574
Alignment:
Q  132 tagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatct 222  Q
    |||||||| | |||| |||||||| || | ||||||| |||||| |||||||| ||||| || |  |||||||||||||||||||| ||||    
T  52961664 tagaaatcatggttggacctaacacaaccccataaaaccggcttttgaggtgaggattgccctcacttataaacacattgtcagaccatct 52961574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 17452680 - 17452764
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||| ||||||||||    
T  17452680 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacattgtcag 17452764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 25145484 - 25145572
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| ||||   |||||| || |||| |||| || |||||||||||| ||||| ||||  | ||||||||||||||||||    
T  25145484 tcttagaaatcgtggttgggtctaacacaacctcacaaaaccgacttgtgaggtgaggattgcccccactaataaacacattgtcagac 25145572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 26173259 - 26173310
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcaga 216  Q
    |||| ||||||||||||||| ||||| ||||  |||||||||||||||||||    
T  26173259 aaaaccggcttgtgaggtgatgattgcccccacttataaacacattgtcaga 26173310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 2859391 - 2859477
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||| || ||||  ||||||| || |||| | || ||||||||||||| | ||||| ||||  ||||||||||||||||||    
T  2859391 tcttagaaatggtggttgggcctaacacaacctcacagaaccggcttgtgaggtaaggattgcccccacttataaacacattgtcag 2859477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 25713436 - 25713390
Alignment:
Q  171 ggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    |||||||||||||| ||||| ||||  ||||||||||||||||||||    
T  25713436 ggcttgtgaggtgacgattgcccccacttataaacacattgtcagac 25713390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 27413667 - 27413581
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| | ||||| ||||||| || ||||||||| ||  ||||||||||| ||||| | ||  ||||||||| ||||||||    
T  27413667 tcttagaaatcatggttgagcctaacacaacctcataaaaccgatttgtgaggtgaggattgcctccacttataaacatattgtcag 27413581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 35772349 - 35772263
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| |||||| |||||| | ||||| ||||  ||||||||||||||||||    
T  35772349 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttctgaggtaaggattgcccccacttataaacacattgtcag 35772263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 8750023 - 8749946
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaaca 206  Q
    ||||||||||  | ||||||| ||||| ||||||| ||||||||||||| |||||| || | ||||| |||| |||||    
T  8750023 tcttagaaatgatggttgaacataacacaatctcacaaaatcggcttgtaaggtgaggactatccccatttacaaaca 8749946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 13382454 - 13382499
Alignment:
Q  177 tgaggtgaagattgtccccgtttataaacacattgtcagactatct 222  Q
    |||| ||| |||||||| |||||||||||| |||||||||||||||    
T  13382454 tgagatgaggattgtcctcgtttataaacatattgtcagactatct 13382499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 16163216 - 16163167
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    |||| ||| ||||||||||||||||| ||||  |||||||||||||||||    
T  16163216 aaaaccggattgtgaggtgaagattgcccccacttataaacacattgtca 16163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 38733468 - 38733379
Alignment:
Q  128 ttcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    |||||||||||||| ||||  ||||||| || |||| |||| |||| | |||||||| ||||| || |  ||||||||| ||||||||||    
T  38733468 ttcttagaaatcgttgttgggcctaacacaacctcacaaaaccggcctatgaggtgaggattgccctcacttataaacatattgtcagac 38733379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 9499286 - 9499238
Alignment:
Q  174 ttgtgaggtgaagattgtccccgtttataaacacattgtcagactatct 222  Q
    ||||||||||||||||| |||   ||||||||| |||||||||||||||    
T  9499286 ttgtgaggtgaagattgcccctacttataaacatattgtcagactatct 9499238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 28408077 - 28408129
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    |||| ||||||||||||| | ||||||||||  ||||||||| ||||||||||    
T  28408077 aaaaccggcttgtgaggtaaggattgtccccacttataaacaaattgtcagac 28408129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 249
Target Start/End: Complemental strand, 49142593 - 49142473
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    |||||||||| || ||||| ||||||| |||| || | | ||| |||||||||||  ||||| || |  || ||||||||||||||||  || |||||||    
T  49142593 tcttagaaatggtggttgagcctaacacaatcccacatattcgacttgtgaggtggggattgccctcacttctaaacacattgtcagatcatattttgtc 49142494  T
Q  229 agatgtaagactctttaacac 249  Q
      ||||  |||||||||||||    
T  49142493 taatgtgtgactctttaacac 49142473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 20225124 - 20225040
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||||||||||| || | || ||||||| |||||||||||| |||||||| | |||||||||||| ||||||    
T  20225124 ttagaaatcgtggttgaacctaacacaaccccacaaaatcgacttgtgaggtgaggattgtcctcatttataaacacactgtcag 20225040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 24346500 - 24346586
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||| || ||||| ||||||| || | ||||||| ||||||||||||||| ||||  ||||  ||||||||||||||||||    
T  24346500 tcttagaaattgtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattacccccacttataaacacattgtcag 24346586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 24531684 - 24531598
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  | ||||| || | || |||||||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  24531684 tcttagaaatcgtggttgggcataacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacacattgtcag 24531598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 41666756 - 41666842
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  41666756 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 41666842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 41666992 - 41667078
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  41666992 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 41667078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 15438926 - 15438842
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaacac 249  Q
    |||||||||||||||||||| ||||| ||||  ||||||||||||| |||||| ||||  | || ||||| | ||||||||||||    
T  15438926 aaaatcggcttgtgaggtgaggattgcccccacttataaacacattatcagaccatctcatatccgatgtgaaactctttaacac 15438842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 15480407 - 15480319
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| ||||  ||||||| || | || |||| | ||||||||||||| ||||| ||||  ||||||||||||||||||||    
T  15480407 tcttagaaatcgtggttgggcctaacagaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacacattgtcagac 15480319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 24528625 - 24528537
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||| | ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||||    
T  24528625 tcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagac 24528537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 170570 - 170669
Alignment:
Q  149 cctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaaca 248  Q
    ||||||| || |||| |||| ||||||||||||||| || || ||||  ||||||||||||  | |||| |||||||||| |||||  ||||||||||||    
T  170570 cctaacacaacctcacaaaaccggcttgtgaggtgaggactgcccccacttataaacacatgcttagaccatcttttgtccgatgtgtgactctttaaca 170669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 1564566 - 1564685
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    ||||||||||||| ||||| ||||||| || | || ||||  | ||||||| |||| ||||| ||||  |||||| ||||||||||||| |||| || ||    
T  1564566 tcttagaaatcgtggttgagcctaacacaaccccacaaaactgtcttgtgatgtgaggattgcccccacttataatcacattgtcagaccatctcttatc 1564665  T
Q  229 agatgtaagactctttaaca 248  Q
     |||||  ||||||||||||    
T  1564666 cgatgtgggactctttaaca 1564685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 17352667 - 17352750
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgt 212  Q
    |||||||||| || |||| ||||||||||| | |  ||||| |||||||||||||||||||  ||||  |||||||||||||||    
T  17352667 tcttagaaatggtggttggacctaacataaccccgcaaaattggcttgtgaggtgaagattacccccacttataaacacattgt 17352750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 38731837 - 38731924
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcaga 216  Q
    |||||||||| || ||||  ||||||| || |||| ||||||| |||||||||||| |||||| | |  |||||||||||||||||||    
T  38731837 tcttagaaatggtggttgtgcctaacacaacctcacaaaatcgacttgtgaggtgaggattgttctcacttataaacacattgtcaga 38731924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 17352434 - 17352520
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||| | || ||||| ||||||  || |||| |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  17352434 tcttagaagtggtggttgagcctaacgcaacctcacaaaaccggcttgtgaggtgatgattgcccccacttataaacacattgtcag 17352520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 24269870 - 24269955
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||| || ||||| ||||||| || | ||||||| ||||||||||||||| ||||  ||||  ||||||||||||||||||    
T  24269870 tcttagaaattgtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggatt-accccacttataaacacattgtcag 24269955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 2061978 - 2062023
Alignment:
Q  170 cggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||    
T  2061978 cggcttgtgaggtgaagattgcccccacttataaacacattgtcag 2062023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 6919428 - 6919512
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    ||||| ||||||| ||||| ||||||| || |||| |||| | |||||||||||||  |||||||||  |||||||||||||||||    
T  6919428 tcttaaaaatcgtggttgagcctaacacaacctcacaaaa-ctgcttgtgaggtgagaattgtccccacttataaacacattgtca 6919512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 18333462 - 18333557
Alignment:
Q  127 attcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatct 222  Q
    |||||||||| | || ||||  ||||||| || | || |||| ||||||||||||||| ||||  ||||  |||||||||||||||||||| ||||    
T  18333462 attcttagaatttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacattgtcagaccatct 18333557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 95301 - 95351
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||| ||||||||||| ||| ||||||||||  ||||||||||||||||||    
T  95301 aaaaccggcttgtgagatgaggattgtccccacttataaacacattgtcag 95351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 3859307 - 3859393
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| || |||| |||||||||| | || |||||   |||||||||||| |||||||| |  ||||||||||||| ||||    
T  3859307 tcttagaaatcttaattgagcctaacataaccccacaaaattaacttgtgaggtgaggattgtcctcacttataaacacattatcag 3859393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 6413461 - 6413511
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| |||||||| ||||| ||||  ||||||||||||||||||    
T  6413461 aaaatcggcttatgaggtgaggattgcccccacttataaacacattgtcag 6413511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 38731602 - 38731656
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtg 183  Q
    ||||||||||  | |||| |||||||| || ||||||||||||||||||||||||    
T  38731602 tcttagaaatgatggttggacctaacacaacctcataaaatcggcttgtgaggtg 38731656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 43117967 - 43117881
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||| ||||||| ||||  ||||||| || |  |||||| ||||||||||| ||| ||||| || | |||||||||||||||||||    
T  43117967 tcttaaaaatcgttgttgggcctaacacaaccctataaaaccggcttgtgagatgaggattgccctcatttataaacacattgtcag 43117881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 24647778 - 24647697
Alignment:
Q  132 tagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtc 213  Q
    |||||||||| |||| |||||||| ||   || |||| ||||||||||||||| ||||| | ||  ||||||||||||||||    
T  24647778 tagaaatcgtggttggacctaacacaactccacaaaaccggcttgtgaggtgaggattgccaccagttataaacacattgtc 24647697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 37782092 - 37782137
Alignment:
Q  172 gcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| ||||| ||||  ||||||||||||||||||||    
T  37782092 gcttgtgaggtgatgattgcccccacttataaacacattgtcagac 37782137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 2063733 - 2063820
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| ||||  ||||||| || | || |||| || |||||||| ||| ||||| ||||  ||||||||||||||||||||    
T  2063733 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtgag-tgaggattgcccccacttataaacacattgtcagac 2063820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 4481604 - 4481648
Alignment:
Q  171 ggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||| |||| ||||| |||| |||||||||||||||||||    
T  4481604 ggcttgtgacgtgaggattgcccccatttataaacacattgtcag 4481648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 7607643 - 7607595
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtc 213  Q
    |||| ||||||||||||||||||||||| ||  ||||||||| ||||||    
T  7607643 aaaaccggcttgtgaggtgaagattgtctccacttataaacagattgtc 7607595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 12034777 - 12034697
Alignment:
Q  127 attcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacac 207  Q
    ||||||||||||||| ||||  ||||||| ||||  | ||||  |||||||||||||| ||||  |||| |||||||||||    
T  12034777 attcttagaaatcgtggttgggcctaacacaatcctacaaaactggcttgtgaggtgaggatttcccccatttataaacac 12034697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 13296977 - 13296889
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| ||||   |||||| |||| || |||| ||| ||||||||||| | ||| ||||  ||||||||| ||||||||||    
T  13296977 tcttagaaatcgtggttgggtctaacacaatcccacaaaaccggtttgtgaggtgagggttgcccccacttataaacaaattgtcagac 13296889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 17899490 - 17899578
Alignment:
Q  160 ctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaaca 248  Q
    |||| ||||||||||  |||||||| ||||| ||||  ||||||||||||  |||| | || ||||||| |||||| ||||||| ||||    
T  17899490 ctcacaaaatcggctcatgaggtgaggattgcccccacttataaacacatgttcaggccatattttgtcggatgtatgactcttcaaca 17899578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 21209922 - 21210006
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  | ||||| || | || |||| |||||||||||||||  |||||||||  ||||||||| ||||||||    
T  21209922 ttagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgagaattgtccccacttataaacaaattgtcag 21210006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 21306972 - 21306884
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| ||||   |||||| |||| || || | ||||||||||||||| ||||| ||||  ||||||| |||||| |||||    
T  21306972 tcttagaaatcgtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaatacattggcagac 21306884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 21314810 - 21314722
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| ||||   |||||| |||| || || | ||||||||||||||| ||||| ||||  ||||||| |||||| |||||    
T  21314810 tcttagaaatcgtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaatacattggcagac 21314722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 27132994 - 27133078
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| || |  ||||||||| ||||||||    
T  27132994 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaacaaattgtcag 27133078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 38976982 - 38976930
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    |||| ||| ||||||||||| |||||||||   ||||||||||||||||||||    
T  38976982 aaaaccggtttgtgaggtgaggattgtcccaacttataaacacattgtcagac 38976930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 10523102 - 10522986
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcag 230  Q
    ||||||||||| ||||  ||||||| |||| || ||||  |||||| ||||||||||||||| || ||||||||||||||||||||  ||||||| |  |    
T  10523102 ttagaaatcgtggttgggcctaacacaatcccacaaaaatggcttgcgaggtgaagattgtcaccatttataaacacattgtcagatcatcttttattcg 10523003  T
Q  231 atgtaagactctttaac 247  Q
    |||  ||||||||||||    
T  10523002 atgcgagactctttaac 10522986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 128 - 249
Target Start/End: Original strand, 13764314 - 13764435
Alignment:
Q  128 ttcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgt 227  Q
    |||||||||||||| |||||  |||||| |||||||||||| ||| |||| ||||||||||||  | | || |||||||| ||||||||  |||| || |    
T  13764314 ttcttagaaatcgtggttgagtctaacagaatctcataaaaccggtttgtaaggtgaagattgctctcattaataaacactttgtcagatcatctcttat 13764413  T
Q  228 cagatgtaagactctttaacac 249  Q
    || |||| | ||||||||||||    
T  13764414 caaatgtgatactctttaacac 13764435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 16419587 - 16419499
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||||    
T  16419587 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagac 16419499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 25082536 - 25082650
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    ||||||||||||| |||| |||||||| || | || ||||  |||||||||||||| ||||| |||   |||||||||||||||||||| |||| || ||    
T  25082536 tcttagaaatcgtggttggacctaacacaaccccacaaaactggcttgtgaggtgatgattgcccctacttataaacacattgtcagaccatctcttatc 25082635  T
Q  229 agatgtaagactctt 243  Q
     ||| | ||||||||    
T  25082636 tgatatgagactctt 25082650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 40149004 - 40149081
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacaca 208  Q
    ||||||||| | |||| |||||||| || | || |||||||||||||||||||| ||||||||||  |||||||||||    
T  40149004 ttagaaatcatggttggacctaacacaaccccacaaaatcggcttgtgaggtgaggattgtccccacttataaacaca 40149081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 42639656 - 42639701
Alignment:
Q  172 gcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||    
T  42639656 gcttgtgaggtgacgattgtccccatttataaacacattgtcagac 42639701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 5711436 - 5711524
Alignment:
Q  127 attcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||||| ||||  ||||||| || | || |||| |||||||| |||||| ||||| ||||  ||||||||||||||||||    
T  5711436 attcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgttaggtgaggattgcccccacttataaacacattgtcag 5711524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 9927996 - 9927902
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatctt 223  Q
    |||||||| |||| |||| || ||||| || | || |||||| ||||||||||||| ||||  ||||  |||||||||||||||||||| |||||    
T  9927996 tcttagaattcgtggttggacgtaacacaaccccaaaaaatcagcttgtgaggtgaggattacccccacttataaacacattgtcagaccatctt 9927902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 36351921 - 36352011
Alignment:
Q  126 gattcttagaaatcgtagttgaacctaacataatctcataaaa-tcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||||||||| ||||  |||||||||| | || |||| |  |||||||||||||  |||||||||  ||||||||||||||||||    
T  36351921 gattcttagaaatcgtggttgggcctaacataaccccacaaaaatttgcttgtgaggtgagaattgtccccacttataaacacattgtcag 36352011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 37812303 - 37812353
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||| |||||||||||| ||||||||||  ||||||||||||||||||    
T  37812303 aaaatcgacttgtgaggtgaggattgtccccacttataaacacattgtcag 37812353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 40379208 - 40379294
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||| ||||||    
T  40379208 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacactgtcag 40379294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 40379443 - 40379529
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||| ||||||    
T  40379443 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacactgtcag 40379529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 2324554 - 2324473
Alignment:
Q  134 gaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||| ||||| ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  2324554 gaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 2324473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 36352158 - 36352251
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatct 222  Q
    ||||| |||| || ||||||||||||| || | || |||| |||||| |||||||| ||||| ||||  ||||||||||||||| ||| |||||    
T  36352158 tcttaaaaattgtggttgaacctaacacaaccccacaaaaccggcttttgaggtgatgattgcccccacttataaacacattgttagattatct 36352251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 11020643 - 11020555
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||   ||| |||||||| |||| ||  ||||||||||||||||||| ||||| | ||  ||||||||||||| ||||||    
T  11020643 tcttagaaatcgcgattggacctaacacaatcccactaaatcggcttgtgaggtgaggattgcctccacttataaacacattttcagac 11020555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 17525373 - 17525425
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||||    
T  17525373 aaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagac 17525425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 19191611 - 19191695
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||||||||  ||||||||| | ||||||    
T  19191611 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataaacaaactgtcag 19191695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 249
Target Start/End: Original strand, 19570973 - 19571093
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    ||||||||||||| ||||  ||||||| |||  || ||||||| ||| |||||||| ||||| ||||  ||||||||||||  ||||   ||  ||||||    
T  19570973 tcttagaaatcgtggttgggcctaacacaattccacaaaatcgacttatgaggtgaggattgcccccacttataaacacatgttcagttcattatttgtc 19571072  T
Q  229 agatgtaagactctttaacac 249  Q
     ||||| ||||||||||||||    
T  19571073 cgatgtgagactctttaacac 19571093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 5851680 - 5851767
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctc-ataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||  | |||| |||||||| || ||| | |||| ||||||||||||||| ||||||||||  ||||||| ||||||||||    
T  5851680 tcttagaaatgatggttggacctaacacaacctccacaaaaccggcttgtgaggtgaggattgtccccacttataaatacattgtcag 5851767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 2029854 - 2029768
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||| | || | || |||| ||||||||||||||| ||||| | ||  ||||||||||||||||||    
T  2029854 tcttagaaatcgtggttgggcctaaaacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaacacattgtcag 2029768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 2030089 - 2030003
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||| | || | || |||| ||||||||||||||| ||||| | ||  ||||||||||||||||||    
T  2030089 tcttagaaatcgtggttgggcctaaaacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaacacattgtcag 2030003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 2324319 - 2324237
Alignment:
Q  135 aaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||||    
T  2324319 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcagac 2324237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 17719449 - 17719399
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  17719449 aaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 17719399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 19544370 - 19544455
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| |||| ||||||||||    || |||| |||||||||||||| |||||| ||||  ||||||||||||| ||||    
T  19544370 tcttagaaatcgtggttggacctaacatagctccacaaaaccggcttgtgaggtg-agattgcccccacttataaacacattatcag 19544455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 32884184 - 32884106
Alignment:
Q  137 atcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  32884184 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 32884106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 37812533 - 37812583
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||| |||||||||||| ||||| ||||  ||||||||||||||||||    
T  37812533 aaaatcgacttgtgaggtgaggattgcccccacttataaacacattgtcag 37812583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 10571055 - 10570994
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattg 190  Q
    ||||||||||||| ||||| ||||||| || | || |||| |||||||| ||||||||||||    
T  10571055 tcttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtaaggtgaagattg 10570994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 16533611 - 16533546
Alignment:
Q  150 ctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||| || |||| |||| |||||||||| |||| ||||| ||||  ||||||||||||||||||    
T  16533611 ctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttataaacacattgtcag 16533546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 27897504 - 27897557
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtga 184  Q
    |||||||| || ||||| ||||||| || ||||||||| |||||||||||||||    
T  27897504 ttagaaatggtggttgagcctaacacaacctcataaaaccggcttgtgaggtga 27897557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 17854693 - 17854777
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| |||| || |||| || |||||||| ||| ||||| ||||  ||||||||| ||||||||    
T  17854693 ttagaaatcgtggttgggcctaacacaatcccacaaaaccgacttgtgagatgatgattgcccccacttataaacagattgtcag 17854777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 19544134 - 19544198
Alignment:
Q  128 ttcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtc 192  Q
    ||||||||||||||  |||||||||||  ||||  ||||||||||||| |||||| | |||||||    
T  19544134 ttcttagaaatcgtgattgaacctaactaaatcctataaaatcggcttatgaggtcaggattgtc 19544198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 21591866 - 21591778
Alignment:
Q  130 cttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattg-tccccgtttataaacacattgtcagac 217  Q
    |||||||||||| ||||  ||||||| || | ||||||| || ||| ||||||||||||||  ||||  ||||||||| ||||||||||    
T  21591866 cttagaaatcgtggttgggcctaacacaaccccataaaaccgacttatgaggtgaagattgccccccacttataaacaaattgtcagac 21591778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 24666230 - 24666317
Alignment:
Q  127 attcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||||| ||||| || || | ||||||| |||||||| ||||||||||| ||||| |||   | ||||||||||| ||||    
T  24666230 attcttagaaatcgttgttgagcccaa-acaatctcacaaaatcggtttgtgaggtgaggattgccccaactaataaacacattttcag 24666317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 36316052 - 36316136
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| |||| ||||||||||| | || ||||  ||||||| | |||| ||||| ||||  ||||||||| ||||||||    
T  36316052 ttagaaatcgtggttggacctaacataaccccacaaaactggcttgtaatgtgaggattgcccccacttataaacaaattgtcag 36316136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 7638846 - 7638941
Alignment:
Q  128 ttcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatctt 223  Q
    |||||||||||| |||||| |||||||| || | || |||| | |||||||||||||||||||||| | |||||||||| ||||| |||| |||||    
T  7638846 ttcttagaaatcatagttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattgtcctcatttataaacatattgttagacgatctt 7638941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 21690805 - 21690721
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||| ||||||| || | || |||||||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  21690805 ttagaaatcgtggttgagcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 21690721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 4868575 - 4868662
Alignment:
Q  128 ttcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  4868575 ttcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 4868662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 12330180 - 12330266
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||| ||||  ||||||| || |||| |||| ||||||||||||||| | ||| ||||  ||||||||||||||||||||    
T  12330180 ttagaaatcgtggttgggcctaacacaacctcacaaaaccggcttgtgaggtgagggttgcccccacttataaacacattgtcagac 12330266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 17147659 - 17147745
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||| || |||| ||||||||||| | || |||| ||||||||||||||| ||||| ||||  ||||||| ||||||||||    
T  17147659 tcttagaaatggtggttggacctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacattgtcag 17147745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 25065091 - 25065181
Alignment:
Q  127 attcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||||||||||  ||||||| || | || |||| ||||||||||||||| ||||| |||   ||||||||| ||||||||||    
T  25065091 attcttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccctacttataaacatattgtcagac 25065181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 32993549 - 32993474
Alignment:
Q  173 cttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaaca 248  Q
    ||||| |||||||||||||||||  ||||||||||||  | |||||||||||| |  ||||| |||||||||||||    
T  32993549 cttgtaaggtgaagattgtccccacttataaacacatatttagactatcttttatttgatgtgagactctttaaca 32993474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 4868812 - 4868894
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattg 211  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||    
T  4868812 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattg 4868894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 12330292 - 12330377
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||| ||||  ||||||| || |||| |||| ||||||||||| ||| ||||| ||||  ||||||||||||||||||||    
T  12330292 ttagaaatcgtggttgggcctaacacaacctcacaaaaccggcttgtgagatgaggattg-ccccacttataaacacattgtcagac 12330377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 13740764 - 13740678
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||| ||||| ||||||| || |||| |||| || ||| ||||| || ||||||| ||  ||||||||||||||||||||    
T  13740764 ttagaaatcgtggttgagcctaacacaacctcacaaaaccgacttatgaggcgaggattgtctccacttataaacacattgtcagac 13740678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 13746264 - 13746178
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||| ||||| ||||||| || |||| |||| || ||| ||||| || ||||||| ||  ||||||||||||||||||||    
T  13746264 ttagaaatcgtggttgagcctaacacaacctcacaaaaccgacttatgaggcgaggattgtctccacttataaacacattgtcagac 13746178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 19639112 - 19639198
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| |||| |||||||| |  | ||  ||| ||| ||||||||||| ||||||||||  ||||||||||||||||||    
T  19639112 tcttagaaatcgtggttggacctaacacagccccactaaaccggtttgtgaggtgaggattgtccccacttataaacacattgtcag 19639198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 12329949 - 12330026
Alignment:
Q  135 aaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgt 212  Q
    ||||||| ||||  ||||||| || |||| |||||| ||||||||||||| ||||| ||||  |||||||||||||||    
T  12329949 aaatcgtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaacacattgt 12330026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 30256662 - 30256549
Alignment:
Q  130 cttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtca 229  Q
    |||||||||||| ||||  ||||||| || | || |||| ||| ||||||| ||| ||||| ||||  ||||||||||||||||| || || | |||||     
T  30256662 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgagttgaggattgcccccagttataaacacattgtcaaaccatgtattgtcc 30256563  T
Q  230 gatgtaagactctt 243  Q
    ||||| ||||||||    
T  30256562 gatgtgagactctt 30256549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 2736164 - 2736252
Alignment:
Q  127 attcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||||| ||||   |||||| ||||  | |||||| | || |||||||| ||||||||||  ||||||||||||||||||    
T  2736164 attcttagaaatcgtggttgggtctaacacaatcctacaaaatctgtttatgaggtgaggattgtccccacttataaacacattgtcag 2736252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 3680097 - 3680005
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatc 221  Q
    |||||||||| || ||||  ||||||| || | || ||||||| ||||||||  || ||||| ||||  ||||||||||||||||||||||||    
T  3680097 tcttagaaattgtggttgggcctaacacaaccccacaaaatcgacttgtgagaggaggattgcccccagttataaacacattgtcagactatc 3680005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 8026472 - 8026388
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  8026472 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 8026388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 27772797 - 27772713
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| |||| |||||||| ||   || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  27772797 ttagaaatcgtggttggacctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 27772713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 9705105 - 9705014
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactat 220  Q
    |||||||||| || ||||  ||||||| || | || |||| || |||||||||||| ||||| ||||  |||||||||||||||||| ||||    
T  9705105 tcttagaaatggtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgatgattgcccccacttataaacacattgtcaggctat 9705014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 9705339 - 9705256
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgt 212  Q
    ||||||||||||| ||||   |||||| || | || |||| ||||||||||||||| ||||| ||||  |||||||||||||||    
T  9705339 tcttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgt 9705256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 19713038 - 19712951
Alignment:
Q  128 ttcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| || ||||  ||||||| |||| || |||| |||||||||||||||  |||| ||||  ||||||||| ||||||||    
T  19713038 ttcttagaaatggtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgagaattgcccccacttataaacaaattgtcag 19712951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 20830814 - 20830715
Alignment:
Q  150 ctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaa-cacattgtcagactatcttttgtcagatgtaagactctttaaca 248  Q
    |||||| || |||| |||||| | ||||||||||| ||||| ||||  ||||||| |||||  | |||  |||||||||| |||||||||||||||||||    
T  20830814 ctaacacaacctcacaaaatcagtttgtgaggtgatgattgcccccacttataaaacacatgtttagatcatcttttgtccgatgtaagactctttaaca 20830715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 30505787 - 30505728
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtcccc-gtttataaacacattgtcagactatctt 223  Q
    ||||||||||| |||||||| ||||||||||  |||| |||||||||||||||| |||||    
T  30505787 aaaatcggcttatgaggtgaggattgtccccactttacaaacacattgtcagaccatctt 30505728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 5648671 - 5648753
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattg 211  Q
    ||||||||||  | |||| |||||||| || |||| |||| ||||||||||||||| ||||||||    ||||||||||||||    
T  5648671 tcttagaaattatggttggacctaacacaacctcacaaaaccggcttgtgaggtgatgattgtccttaattataaacacattg 5648753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 6542708 - 6542821
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    ||||||||||||| |||| || ||||| || |  | |||| ||| ||||||||||| ||||| |||| |||||||||| |||||||||| ||||  | ||    
T  6542708 tcttagaaatcgtggttggacttaacacaaccctacaaaaccggtttgtgaggtgatgattg-ccccatttataaacagattgtcagaccatctcctatc 6542806  T
Q  229 agatgtaagactctt 243  Q
     ||||| ||||||||    
T  6542807 cgatgtgagactctt 6542821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 8566960 - 8567045
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||| ||||  ||||||| || | || |||| ||| ||||||||||| |||||| |||  ||||||||||||||||||||    
T  8566960 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgaggtgaggattgt-cccacttataaacacattgtcagac 8567045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 13353286 - 13353200
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||| || ||||  ||||||| || | || |||| |||||||| |||||| ||||| ||||  ||||||||||||||||||    
T  13353286 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 13353200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 33796411 - 33796325
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||| || ||||  ||||||| || | || |||| |||||||| |||||| ||||| ||||  ||||||||||||||||||    
T  33796411 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 33796325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 501851 - 501791
Alignment:
Q  148 acctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacat 209  Q
    ||||||||||||||||||||| | | |||||| || | ||||||| ||||||||||||||||    
T  501851 acctaacataatctcataaaaccagtttgtga-gtcatgattgtctccgtttataaacacat 501791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 6542978 - 6543035
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatct 222  Q
    |||| |||||| |||||||| ||||| ||||  |||||||||||||||||||| ||||    
T  6542978 aaaaccggcttctgaggtgatgattgcccccacttataaacacattgtcagaccatct 6543035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 24554166 - 24554109
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatct 222  Q
    |||| ||||||||||||||||||||| ||||  ||||||| | |||||||||| ||||    
T  24554166 aaaaccggcttgtgaggtgaagattgcccccacttataaatatattgtcagaccatct 24554109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 3680287 - 3680243
Alignment:
Q  173 cttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    |||||||||||| ||||| ||||  ||||||||||||||||||||    
T  3680287 cttgtgaggtgatgattgcccccacttataaacacattgtcagac 3680243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 248
Target Start/End: Complemental strand, 3823370 - 3823270
Alignment:
Q  148 acctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaac 247  Q
    |||||||| || | ||||||||| | |||||| |||| ||||||||||  ||||||||| ||| ||||   |||| || || ||||| ||||||||||||    
T  3823370 acctaacacaaccccataaaatcagtttgtgatgtgatgattgtccccacttataaacaaattatcaggtcatctcttatccgatgtgagactctttaac 3823271  T
Q  248 a 248  Q
    |    
T  3823270 a 3823270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 11721990 - 11721902
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| ||||  ||||||| || | || |||| |||||| |||||||| ||||| ||||  ||||||||| ||||| ||||    
T  11721990 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccccacttataaacaaattgttagac 11721902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 27653300 - 27653216
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| |||| || |||| || |||||||||||| ||||  ||||  ||||||||| ||||||||    
T  27653300 ttagaaatcgtggttgggcctaacacaatcccacaaaaccgacttgtgaggtgaggatttcccccacttataaacaaattgtcag 27653216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 30256895 - 30256812
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  30256895 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg-ccccacttataaacatattgtcag 30256812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 14388 - 14300
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||| ||| ||||  ||||||| || | || |||| ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  14388 tcttagaaaacgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgtccccacttataaacacattgtcagac 14300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 12317131 - 12317043
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||| ||||  ||||||| |||| || |||||| |||| |||||||| ||||| ||||  ||||||||||||||||||||    
T  12317131 tcttagaaatcgtggttgggcctaacacaatcccacaaaatcagcttatgaggtgaggattgcccccacttataaacacattgtcagac 12317043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 29907769 - 29907845
Alignment:
Q  173 cttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaacac 249  Q
    |||||||||||| ||||| ||||  ||||||||||||||||||||||||| || || |||||  |||||||||||||    
T  29907769 cttgtgaggtgaggattgaccccacttataaacacattgtcagactatctcttatccgatgtgggactctttaacac 29907845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 15042668 - 15042755
Alignment:
Q  128 ttcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||||||| ||||| ||||||| || | || |||||||| ||| ||||||| ||||| ||||  ||||||||||||||||||    
T  15042668 ttcttagaaatcgtggttgagcctaacacaaccccacaaaatcggtttgcgaggtgatgattgcccccacttataaacacattgtcag 15042755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 28213364 - 28213439
Alignment:
Q  173 cttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaaca 248  Q
    ||||||||||||  | |||||||  ||||||| ||||||||||||||||| || || |||||||||||||||||||    
T  28213364 cttgtgaggtgagaaatgtccccacttataaatacattgtcagactatctcttatccgatgtaagactctttaaca 28213439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 39052928 - 39053014
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  39052928 tcttagaaatcgttgttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 39053014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 37001549 - 37001432
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    ||||||||||||| ||||  ||||||| || | || |||| |||||||||| |||| ||||||||||  |||||||||| ||||||| | || |  ||||    
T  37001549 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgatgtgaggattgtccccacttataaacactttgtcaggccatttcctgtc 37001450  T
Q  229 agatgtaagactctttaa 246  Q
     ||||| |||||||||||    
T  37001449 cgatgtgagactctttaa 37001432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 5931946 - 5932034
Alignment:
Q  127 attcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||| |||| || ||||  |||||||||| | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  5931946 attcttaaaaatggtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 5932034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 5940100 - 5940024
Alignment:
Q  172 gcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaaca 248  Q
    ||||||||||||| |||||||||| |||||||||||||||||| || |||| |  || |||||  ||||||||||||    
T  5940100 gcttgtgaggtgaggattgtccccatttataaacacattgtcaaaccatctctcatccgatgtgggactctttaaca 5940024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 12547183 - 12547096
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||||||||  ||||||| || | || |||| ||||||||||||||||||||| ||||  ||||||| | ||||||||||    
T  12547183 tcttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattg-ccccacttataaataaattgtcagac 12547096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 17469901 - 17469817
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||| ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  17469901 ttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 17469817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 17477148 - 17477064
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||| ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  17477148 ttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 17477064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 35682779 - 35682866
Alignment:
Q  128 ttcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||||||| ||||  ||||||| || | || |||| ||||||| ||||||| ||||| ||||  ||||||||||||||||||    
T  35682779 ttcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgcccccacttataaacacattgtcag 35682866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 24532420 - 24532506
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| | ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  24532420 tcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacacattgtcag 24532506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 41790743 - 41790658
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| |||||| |||||||| ||||||||||  ||||||||||||||||||    
T  41790743 tcttagaaatcgtggttgggcctaacacaacc-cacaaaaccggcttatgaggtgaggattgtccccacttataaacacattgtcag 41790658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 20301346 - 20301261
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    ||||||||||||| ||||  ||||||| || |||| ||||  |||||||||||| | ||||| ||||  |||||||||||||||||    
T  20301346 tcttagaaatcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacacattgtca 20301261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 21087978 - 21087893
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    ||||||||||||| ||||  ||||||| || |||| ||||  |||||||||||| | ||||| ||||  |||||||||||||||||    
T  21087978 tcttagaaatcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacacattgtca 21087893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 5675733 - 5675849
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtc 228  Q
    |||||||||||||| ||  |||||||| ||   || |||||| |||||||||||||  |||||| |   |||||||||||||||||||| ||| | | ||    
T  5675733 tcttagaaatcgtaatttgacctaacacaactccacaaaatcagcttgtgaggtgagaattgtctctacttataaacacattgtcagaccatcatctatc 5675832  T
Q  229 agatgtaagactcttta 245  Q
     |||||| |||||||||    
T  5675833 cgatgtaggactcttta 5675849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 10614938 - 10615018
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacat 209  Q
    ||||| ||||||| ||||| ||||| | || | || |||||||||||||||||||||||||  |||| ||| |||||||||    
T  10614938 tcttataaatcgtggttgagcctaatacaaccccacaaaatcggcttgtgaggtgaagattacccccatttgtaaacacat 10615018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 11232428 - 11232516
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    |||||||||| || ||||  ||||||| || | || |||| |||||||| |||||| ||||| ||||  ||||||||||||||||||||    
T  11232428 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcagac 11232516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 19256587 - 19256671
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  19256587 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 19256671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 39743612 - 39743528
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| || | || |||||||||||||||||||| ||||| |||   ||||||||| ||||||||    
T  39743612 ttagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccccaacttataaacaaattgtcag 39743528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 214
Target Start/End: Complemental strand, 4828151 - 4828068
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    ||||| ||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||||||||  ||||||||| |||||||    
T  4828151 ttagagatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataaacaaattgtca 4828068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 5590369 - 5590460
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatct 222  Q
    |||||||| || ||||  ||||||| || |||| |||| |||||||||| |||| ||||| ||||  || ||||||||||||||||| ||||    
T  5590369 ttagaaattgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacattgtcagaccatct 5590460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 10450085 - 10449999
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||| ||||||| || |  | |||| |||||| |||||||| ||||| || |  ||||||||||||||||||    
T  10450085 tcttagaaatcgtggttgagcctaacacaaccctacaaaaccggcttctgaggtgaggattgcccacacttataaacacattgtcag 10449999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 11232193 - 11232279
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||| || ||||  ||||||| || | || |||| |||||||| |||||| ||||| ||||  ||||||||||||||||||    
T  11232193 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 11232279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 29005949 - 29005863
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||   |||||| || |||||||| ||||||| ||| |||| |||||| |||  ||||||||| ||||||||    
T  29005949 tcttagaaatcgtggttgggtctaacacaacctcataaattcggcttatgaagtgaggattgttcccacttataaacatattgtcag 29005863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 29099775 - 29099833
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatctt 223  Q
    |||||| | ||||||||||||||||| | ||  |||||||||||||||||||| |||||    
T  29099775 aaaatcagtttgtgaggtgaagattgcctccacttataaacacattgtcagaccatctt 29099833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 38447462 - 38447512
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  38447462 aaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcag 38447512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 8929101 - 8929016
Alignment:
Q  130 cttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||| |||| ||||  ||||||| || | || |||| ||||||||||||||  ||||| ||||  ||||||||||||||||||    
T  8929101 cttagaattcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgcggattgcccccagttataaacacattgtcag 8929016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 18939296 - 18939373
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaaca 206  Q
    |||||||||| || ||||  ||||||| || |||| |||||| ||||||||||||| ||||| ||||  |||||||||    
T  18939296 tcttagaaatggtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaaca 18939373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 7669682 - 7669638
Alignment:
Q  173 cttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    |||||||||||| ||||| ||||  ||||||||||||||||||||    
T  7669682 cttgtgaggtgaggattgcccccacttataaacacattgtcagac 7669638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 7729990 - 7729906
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaacac 249  Q
    |||| ||||||||||||||| ||||| ||||  |||||||||||| ||||| | ||||  | || |||||  |||||||||||||    
T  7729990 aaaaccggcttgtgaggtgaggattgcccccacttataaacacatggtcaggccatctcatatctgatgtgggactctttaacac 7729906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 8084169 - 8084121
Alignment:
Q  172 gcttgtgaggtgaagattgtccccgtttataaacacattgtcagactat 220  Q
    ||||||||||||| ||||| ||||  ||||||| |||||||||||||||    
T  8084169 gcttgtgaggtgaggattgcccccacttataaatacattgtcagactat 8084121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 8849508 - 8849429
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacat 209  Q
    ||||| ||||||| |||||| ||||||||||| || |||  ||| |||| ||||||||| |||||||  ||||||||||||    
T  8849508 tcttaaaaatcgtggttgaatctaacataatcccacaaatgcggtttgt-aggtgaagagtgtccccacttataaacacat 8849429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 12688157 - 12688061
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatctttt 225  Q
    |||||||||||||  ||||  |||||||||   || |||| ||||||||||||||  ||||| || |  ||||||||||||| ||||| ||||||||    
T  12688157 tcttagaaatcgtgtttgagtctaacataactccacaaaaccggcttgtgaggtggggattgccctcacttataaacacattatcagattatctttt 12688061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 19256821 - 19256905
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| || | || |||| | ||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  19256821 ttagaaatcgtggttgggcctaacacaaccccacaaaacctgcttgtgaggtgaggattgcccccacttataaacaaattgtcag 19256905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 24075307 - 24075391
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| | ||||||    
T  24075307 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaagtgtcag 24075391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 37868625 - 37868701
Alignment:
Q  172 gcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtcagatgtaagactctttaaca 248  Q
    ||||||||||||| ||||| |||| || ||||||||||  |||| | ||| |||||| |||||  ||||||||||||    
T  37868625 gcttgtgaggtgaggattgcccccattaataaacacatgttcaggccatcatttgtccgatgtgggactctttaaca 37868701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 214
Target Start/End: Complemental strand, 5977 - 5890
Alignment:
Q  127 attcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    |||||||||||||||||||| |||||||| || || | ||||||||||||  |||||| |||||||| |  ||||||||| |||||||    
T  5977 attcttagaaatcgtagttggacctaacacaacctaacaaaatcggcttgaaaggtgaggattgtcctcacttataaacatattgtca 5890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 23708242 - 23708313
Alignment:
Q  148 acctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagacta 219  Q
    |||||||| ||||||| |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||||||    
T  23708242 acctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcagacta 23708313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 23726698 - 23726769
Alignment:
Q  148 acctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagacta 219  Q
    |||||||| ||||||| |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||||||    
T  23726698 acctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcagacta 23726769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 23745154 - 23745225
Alignment:
Q  148 acctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagacta 219  Q
    |||||||| ||||||| |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||||||    
T  23745154 acctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcagacta 23745225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 24063679 - 24063750
Alignment:
Q  148 acctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagacta 219  Q
    |||||||| ||||||| |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||||||    
T  24063679 acctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcagacta 24063750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 16239676 - 16239590
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| |||| || |||| ||||||||||||||| | ||| ||||  ||||||||||||||||||    
T  16239676 tcttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggtttgcccccacttataaacacattgtcag 16239590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 31317313 - 31317232
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattg 211  Q
    ||||||||||||| ||||| ||||||| |||| || |||| ||||||||||||||| ||||| ||||  ||||||||||||||    
T  31317313 tcttagaaatcgtggttgagcctaacacaatcccacaaaaccggcttgtgaggtgaggattg-ccccacttataaacacattg 31317232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 214
Target Start/End: Complemental strand, 31317552 - 31317466
Alignment:
Q  128 ttcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    |||||||||||||| ||||  ||||||| || | |  |||||||||||||||||||| |||| |||||  |||||||||||||||||    
T  31317552 ttcttagaaatcgtggttgggcctaacacaaccccgcaaaatcggcttgtgaggtgatgattttccccacttataaacacattgtca 31317466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 35038191 - 35038279
Alignment:
Q  127 attcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||  ||||  ||||||||||||||||||    
T  35038191 attcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacattgtcag 35038279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 39269416 - 39269328
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||| |||||||||||   ||||||| |||| |  |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||||    
T  39269416 tcttaaaaatcgtagttaggcctaacacaatccctcaaaaccggcttgtgaggtgaggattgcccccacttataaacacattgtcagac 39269328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 4155645 - 4155558
Alignment:
Q  128 ttcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||||||| ||||  ||||||| || |  | |||| |||||| |||||||| ||||||||||  ||||||||||||||||||    
T  4155645 ttcttagaaatcgtggttgggcctaacacaaccctaaaaaaccggcttttgaggtgaggattgtccccacttataaacacattgtcag 4155558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 23691442 - 23691513
Alignment:
Q  148 acctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagacta 219  Q
    |||||||| ||||||| |||  ||||||||||||||| ||||| ||||  ||||||||| ||||||||||||    
T  23691442 acctaacacaatctcacaaatccggcttgtgaggtgaggattgcccccacttataaacaaattgtcagacta 23691513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 33640321 - 33640278
Alignment:
Q  174 ttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  33640321 ttgtgaggtgaagattgtccccacttataaacacattgtcagac 33640278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 249
Target Start/End: Complemental strand, 45828330 - 45828211
Alignment:
Q  130 cttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatcttttgtca 229  Q
    |||||||||| | ||||  ||||||| || | || |||| | |||||||||||| |||||| ||||  ||||||||||||  |||| | ||||||||||     
T  45828330 cttagaaatcatggttgggcctaacacaaccccacaaaacctgcttgtgaggtggagattgcccccacttataaacacatgttcaggccatcttttgtcc 45828231  T
Q  230 gatgtaagactctttaacac 249  Q
    |||||  |||||||||||||    
T  45828230 gatgtgggactctttaacac 45828211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 1723075 - 1723161
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  1723075 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 1723161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 20303063 - 20303149
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||| ||||||| ||||| ||||||| |||| || |||| ||| ||||||||||| ||||| ||||  ||||||| ||||||||||    
T  20303063 tcttaaaaatcgtggttgagcctaacacaatcccacaaaaccggtttgtgaggtgaggattgcccccacttataaatacattgtcag 20303149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 54368601 - 54368515
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||   |||||| || | ||||||| ||||||||||||||| ||||| ||||  ||||||||||||| ||||    
T  54368601 tcttagaaatcgtggttgggtctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacacattttcag 54368515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 54567977 - 54567891
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||  ||||  ||||||||||||||||||    
T  54567977 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacattgtcag 54567891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 22729185 - 22729092
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatct 222  Q
    |||||||||| || ||||  ||||||| || |||| |||| |||||||||| |||| ||||| ||||  || ||||||||||||||||| ||||    
T  22729185 tcttagaaattgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacattgtcagaccatct 22729092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 11589868 - 11589784
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  11589868 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 11589784  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 15019515 - 15019570
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtga 184  Q
    ||||||||||||| ||||||| ||||| || ||||||||||||  |||||||||||    
T  15019515 tcttagaaatcgtggttgaacataacacaacctcataaaatcgatttgtgaggtga 15019570  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 37246666 - 37246721
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtga 184  Q
    ||||||||||||| |||| |||||||| |||  ||||||||||| |||||||||||    
T  37246666 tcttagaaatcgtggttggacctaacacaattccataaaatcggtttgtgaggtga 37246721  T

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Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 3975393 - 3975443
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||||||| ||||||| |||| |||||  ||||||||||||||||||    
T  3975393 aaaatcggcttgagaggtgatgattatccccacttataaacacattgtcag 3975443  T

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Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 16926948 - 16927034
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||| | ||||| || | || |||| ||||||||||| ||| ||||  ||||  ||||||||||||||||||    
T  16926948 tcttagaaatcgtggttgagcttaacacaaccccacaaaaccggcttgtgagatgaggattacccccacttataaacacattgtcag 16927034  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 17001422 - 17001508
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    ||||||||| | |||| ||||||||  | | || ||||||| ||| |||||||| ||||| ||||  ||||||||||||||||||||    
T  17001422 ttagaaatcatggttggacctaacactaccccacaaaatcgccttatgaggtgatgattgcccccacttataaacacattgtcagac 17001508  T

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Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 39683268 - 39683353
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtc-cccgtttataaacacattgtcag 215  Q
    ||||||||||| ||||| ||||| | |||| || |||| || |||||||||||| ||||| | ||  |||||||||||||||||||    
T  39683268 ttagaaatcgtggttgagcctaatacaatcccacaaaaccgtcttgtgaggtgaggattgcctccactttataaacacattgtcag 39683353  T

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Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 45138837 - 45138894
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactatct 222  Q
    |||| ||||||||||||||| ||||| ||||  |||||||||||||| ||||| ||||    
T  45138837 aaaaccggcttgtgaggtgaggattgcccccacttataaacacattgccagaccatct 45138894  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 20327619 - 20327699
Alignment:
Q  135 aaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||| ||||||||||    
T  20327619 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacattgtcag 20327699  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 20327850 - 20327934
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||| | ||||  ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  20327850 ttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 20327934  T

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Target: scaffold0692 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 5753 - 5844
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagactat 220  Q
    ||||||||||||| ||||  ||||||| || | |  |||| ||||||||||| ||| ||||| ||||  |||||||||||||||||||||||    
T  5753 tcttagaaatcgtggttgggcctaacacaaccccgcaaaaccggcttgtgagatgaggattgcccccacttataaacacattgtcagactat 5844  T

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Target: scaffold0481 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 3506 - 3555
Alignment:
Q  165 aaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtca 214  Q
    |||| ||||||||||||||||||||||||||  ||||||||| |||||||    
T  3506 aaaaccggcttgtgaggtgaagattgtccccacttataaacaaattgtca 3555  T

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Target: scaffold0519 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 2001 - 1913
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcagac 217  Q
    |||||||||| || ||||  ||||||| || | || |||| |||||||| |||||| ||||| ||||  ||||||||||||||||||||    
T  2001 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcagac 1913  T

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Target: scaffold0519; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 2237 - 2150
Alignment:
Q  128 ttcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||| || ||||  ||||||| || | || |||| |||||||| |||||| ||||| ||||  ||||||||||||||||||    
T  2237 ttcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacattgtcag 2150  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 67363 - 67283
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacat 209  Q
    |||||||| ||||  |||| ||||||| |||| ||||||| | ||||||||||||| ||||| ||||  ||||||||||||    
T  67363 tcttagaattcgtgattgagcctaacacaatcccataaaaccagcttgtgaggtgatgattgcccccacttataaacacat 67283  T

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Target: scaffold0334 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 215
Target Start/End: Original strand, 4431 - 4514
Alignment:
Q  132 tagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    |||||||| | ||||| ||||||| || | || |||| ||||||||||||||| ||||| ||||  ||||||||| ||||||||    
T  4431 tagaaatcatggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaattgtcag 4514  T

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Target: scaffold0048 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 81927 - 81841
Alignment:
Q  129 tcttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcag 215  Q
    ||||||||||||| ||||  ||||||| || | || |||| || ||||| ||||||| |||||||||  ||||||||| ||||||||    
T  81927 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtaaggtgaaaattgtccccacttataaacatattgtcag 81841  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 56542 - 56457
Alignment:
Q  131 ttagaaatcgtagttgaacctaacataatctcataaaatcggcttgtgaggtgaagattgtccccgtttataaacacattgtcaga 216  Q
    ||||||||||| ||||  ||||||| || | || |||| ||||||||||||||| ||||| || |  ||||||||| |||||||||    
T  56542 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccacagttataaacaaattgtcaga 56457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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