View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17983_low_12 (Length: 245)
Name: NF17983_low_12
Description: NF17983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17983_low_12 |
 | |
|
| [»] chr2 (5 HSPs) |
| |
|
| [»] scaffold0016 (2 HSPs) |
| |
|
| [»] chr6 (2 HSPs) |
| |
|
| [»] scaffold0130 (1 HSPs) |
| |
|
| [»] chr7 (3 HSPs) |
| |
|
| [»] chr4 (3 HSPs) |
| |
|
| [»] scaffold0319 (1 HSPs) |
| |
|
| [»] scaffold0022 (1 HSPs) |
| |
|
| [»] scaffold0040 (1 HSPs) |
| |
|
| [»] chr8 (4 HSPs) |
| |
|
| [»] scaffold0064 (1 HSPs) |
| |
|
| [»] scaffold0282 (1 HSPs) |
| |
|
| [»] scaffold0108 (1 HSPs) |
| |
|
| [»] scaffold0005 (1 HSPs) |
| |
|
| [»] scaffold0026 (1 HSPs) |
| | |
|
| [»] scaffold0241 (1 HSPs) |
| |
|
| [»] chr5 (1 HSPs) |
| |
|
| [»] scaffold0001 (1 HSPs) |
| |
|
| [»] scaffold0656 (1 HSPs) |
| |
|
| [»] scaffold0362 (1 HSPs) |
| | |
|
| [»] scaffold0046 (1 HSPs) |
| |
|
| [»] scaffold0051 (1 HSPs) |
| |
|
| [»] scaffold0107 (2 HSPs) |
| | |
|
| [»] scaffold0019 (2 HSPs) |
| | |
|
| [»] scaffold0053 (1 HSPs) |
| | |
|
| [»] scaffold0013 (4 HSPs) |
| | |
|
| [»] scaffold0029 (1 HSPs) |
| | |
|
| [»] scaffold0023 (2 HSPs) |
| | |
|
| [»] scaffold0008 (1 HSPs) |
| | |
|
| [»] scaffold0407 (2 HSPs) |
| | |
|
| [»] scaffold0183 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 22638397 - 22638641
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22638397 |
tcaattttgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
22638496 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22638497 |
tcctaccggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaagccactatgctattatgtcat |
22638596 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22638597 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
22638641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 23200744 - 23200500
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
23200744 |
tcaattttgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcacgggatctgaccctagtctcgatatagtgtgcaatgtggtttcta |
23200645 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23200644 |
tcctaccggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
23200545 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23200544 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
23200500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 23626373 - 23626131
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23626373 |
tcaatattgaaaaaagatcatcccaaggaggatgtagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
23626274 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
23626273 |
tcctaccggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaagccgctatgctattatgtcat |
23626174 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaa |
243 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23626173 |
gaataacggttgtgtagaagagcaacatgcagtctttgaaaaa |
23626131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 24911976 - 24912220
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||| || ||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| || | |
|
|
| T |
24911976 |
tcaatcttaaagaaggaccatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtctcgacatagtatgcaatgtggtatcaa |
24912075 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
| || | ||||||||||||| |||||||||| |||| |||||||||||||| ||||| || |||||||| || ||||| |||||||| ||||||||||| |
|
|
| T |
24912076 |
ttctatctgtggaatacgacgttcagtcagaagttaatgaagttgaaagtgacttcgttgacgaaatggcgacgcacaagccactatgttattatgtcat |
24912175 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
24912176 |
gaataatggttgtgtagaagaacaacatgctgtctttgaaaaacc |
24912220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 23813977 - 23813889
Alignment:
| Q |
139 |
gaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcatgaataatggttgtgtagaagagcaaca |
227 |
Q |
| |
|
||||| |||||||| ||| |||||||||||| | | | || ||| ||||||| ||||| ||||| ||||||||||| ||||| ||||| |
|
|
| T |
23813977 |
gaagtggaaagtgaattcaccgatgaaatggctatttagaagccattatgctactatgttatgaacaatggttgtgtcgaagatcaaca |
23813889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 217; Significance: 1e-119; HSPs: 2)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 126674 - 126430
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
126674 |
tcaattttgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgatatagtgtgcaatgtggtttcta |
126575 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
126574 |
tcctaccggtggaatacgacgtttagtcagaaattaacgaagttgaaagtgatttcgtcgattaaatggcaactcacaatccactatgctattatgtcat |
126475 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
126474 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
126430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 179405 - 179176
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||||||||||||||| ||||| || ||||||||||||||||| ||||||||| | |||||||| || |||| ||||||||||||||||| || |
|
|
| T |
179405 |
tcaattttgaagaaagaccatcctaaagaggatgaagaaatgacgtcgaatttctccaagtctgacccaagcttcgatatagtgtgcaatgtggtctcag |
179306 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
| || || || || || |||| || |||||| |||||||||| |||||||| || ||| |||||| | ||||| ||||||||||||||||| || |
|
|
| T |
179305 |
tgttgcctgttgagtatgacgttccttcagaagttaacgaagtagaaagtgactttaccgacgaaatgattatccacaagccactatgctattatgttat |
179206 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgc |
230 |
Q |
| |
|
|| ||||||||||| ||||| |||||||| |
|
|
| T |
179205 |
aaacaatggttgtgtcgaagatcaacatgc |
179176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 23435184 - 23435428
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23435184 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
23435283 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| |
|
|
| T |
23435284 |
tcttactggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggtaactcacaattctctatgctattatgtcat |
23435383 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23435384 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
23435428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 19035293 - 19035049
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| || || | ||||||||||| || | |
|
|
| T |
19035293 |
tcaattttgaagaaaaataatcccaaaaaggatgaagaaatgacttcgaatttcactggatctgaccccagtcttgatattatatgcaatgtggtctcga |
19035194 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||| |
|
|
| T |
19035193 |
tcctacctgtggaatacgacgtgcagtcagaaattaatgaagttgaaagtgacttcgtcgatgaaatggcaattcacaagccattatgctattatgtcat |
19035094 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19035093 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
19035049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 43224 - 43468
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43224 |
tcaattttgaagaaagatcatcccaaggaggatgaagaactgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
43323 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| |
|
|
| T |
43324 |
tcctactggtggaatacgacgttcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggaaactcacaaggcgctatgctattatgtcat |
43423 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43424 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
43468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 18171749 - 18171505
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
18171749 |
tcaatcttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtacaatgtggtttcta |
18171650 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| ||| |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
18171649 |
tcctactggtggaatacaacgttcagtcagaaattaacgaagtgcaaagtgatttcgtcgatgaaatggcaactcacaagccactatgctattatgtcat |
18171550 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18171549 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
18171505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 14342771 - 14342542
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||||||||||||| | |||| |||||||| || |||||||| |||||||| | ||||||||| || ||||||||||| |||||||||||||| | |
|
|
| T |
14342771 |
tcaattttgaagaaagattgttccaaagaggatgaggagatgacttcaaatttcacggaatctgacccgagcctcgacatagtttgcaatgtggtttcaa |
14342672 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| | || ||||||||||| | |||||||| ||||| ||||| |||| ||| || ||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
14342671 |
tcctgcctgtggaatacgatgtccagtcagagattaatgaagtggaaaatgactttgtcgatgaaatggcaactcacaagccactatgctattatgtcat |
14342572 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgc |
230 |
Q |
| |
|
||||||||| ||||| ||||| |||||||| |
|
|
| T |
14342571 |
gaataatggctgtgtggaagaacaacatgc |
14342542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18133650 - 18133578
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtc |
73 |
Q |
| |
|
|||||| |||||||||||| | |||| || ||||| || |||||||| |||||||| | ||||||||| |||| |
|
|
| T |
18133650 |
tcaattctgaagaaagatcgttccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtc |
18133578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 13289482 - 13289238
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
13289482 |
tcaattttaaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttcta |
13289383 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| |
|
|
| T |
13289382 |
tcctacctttggaatatgacgttcattcagaaattaacgaagttgaaagtgatttcgtcgatgaaatgtcaattcacaagccactatgctattatgtcat |
13289283 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13289282 |
gaataacggttgtgtagaagagcaacatgcagtctttgaaaaacc |
13289238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 14772682 - 14772438
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||| | ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||| || | |
|
|
| T |
14772682 |
tcaattctaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcga |
14772583 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| ||||||||||||| |||||||||| |||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
14772582 |
tcctacctgtggaatacgacgttcagtcagaagttaatgaagttgaaagtgacttcgtcgacgaaatggcaacacacaagccactatgttattatgtcat |
14772483 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
14772482 |
gaataatggttgtgtagaagaacaacatgttgtctttgaaaaacc |
14772438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 18562671 - 18562450
Alignment:
| Q |
6 |
tttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttctatctta |
105 |
Q |
| |
|
|||||||||||||| ||| ||||| |||||||||||||| || || || ||| ||||||||| |||||||||||| | |||||||| || || | || |
|
|
| T |
18562671 |
tttgaagaaagatcctccaaaggaagatgaagaaatgacgtcaaacttttctgaatctgacccgagtctcgacataatatgcaatgtcgtgtcagtgcta |
18562572 |
T |
|
| Q |
106 |
ccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcatgaata |
205 |
Q |
| |
|
| || |||||||| | || || || | || ||||| |||||||| ||| | ||||||||||| | ||| || ||| ||||||| ||||| ||||||| |
|
|
| T |
18562571 |
ctagtcgaatacgatgttccttcggaggtcaatgaagtggaaagtgacttcattgatgaaatggctattcataagccattatgctactatgttatgaata |
18562472 |
T |
|
| Q |
206 |
atggttgtgtagaagagcaaca |
227 |
Q |
| |
|
|||||||||| ||||| ||||| |
|
|
| T |
18562471 |
atggttgtgtcgaagatcaaca |
18562450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 9719 - 9963
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9719 |
tcaattttaaagaaagaacatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttcta |
9818 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||| ||||||||||| |
|
|
| T |
9819 |
tcctacctgtggaatacgacgttcaatcagaaattaacgaagttgaaagtgatttcgtcgacgaaatggcaattcacaagccactatgttattatgtcat |
9918 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9919 |
gaataacggttgcgtagaagagcaacatgcagtctttgaaaaacc |
9963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 11440 - 11684
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
11440 |
tcaattttaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactgaatctgaccctagtctcaacatagtatgcaatgtggtttcta |
11539 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||| |
|
|
| T |
11540 |
tcctacctatggaatatgacgttcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaattaacaagccactatgctattatgtcat |
11639 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11640 |
gaataatagttgtgtagaagagcaacatgcagtctttgaaaaacc |
11684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 10150867 - 10151109
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||| |
|
|
| T |
10150867 |
tcaattttgaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtcttgacatagtatgcaatgtggtttcta |
10150966 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
| |||| |||||||| |||| || |||||||||||| |||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
10150967 |
tactacctgtggaatatgacgttccgtcagaaattaatgaagttgaaagtgatttcatcgatgaaatggcaattcacaagccactatgctattatgtcat |
10151066 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaa |
243 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10151067 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaa |
10151109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 13306991 - 13306797
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
13306991 |
tcaattttgaagaaagatcatcccaaagaggatgaagatatgacttcgaatttcacgggatctgaccctagtctcgatatagtttgcaatgtggtttcta |
13306892 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattat |
195 |
Q |
| |
|
|| |||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
13306891 |
tcctaccggtggaatacgatgttcagttagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaagccactgtgctattat |
13306797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 14693341 - 14693112
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||| ||||||||||| ||| |||| |||||| | || |||||||| |||||||| | ||||||||| | ||||||||||| |||||||||||||||| |
|
|
| T |
14693341 |
tcaatcttgaagaaagaccattccaaagaggataaggagatgacttcaaatttcacggaatctgacccaaacctcgacatagtttgcaatgtggtttcta |
14693242 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|||| || ||||||||||| | |||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
14693241 |
tcttgcctgtggaatacgatgtccagtcagaaattaatgaagttgaaattgacttcgtcgatgaaatggaaactcacaagccactatgctattatgtcat |
14693142 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgc |
230 |
Q |
| |
|
||||||||| ||||| ||||| |||||||| |
|
|
| T |
14693141 |
gaataatggctgtgtggaagaacaacatgc |
14693112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 12 - 230
Target Start/End: Original strand, 10782247 - 10782465
Alignment:
| Q |
12 |
gaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcttaccggtg |
111 |
Q |
| |
|
|||||||||||| || || ||||| |||||||||||||||||||| | ||||||||| ||||| |||||||| || ||||||||||| || || || ||| |
|
|
| T |
10782247 |
gaaagatcatccaaaagaagatgaggaaatgacttcgaatttcacagaatctgacccaagtcttgacatagtttgtaatgtggtttccattttgcctgtg |
10782346 |
T |
|
| Q |
112 |
gaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcatgaataatggtt |
211 |
Q |
| |
|
||||| || | |||||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
10782347 |
gaatatgatgtccagtcagaaattaatgaagccgaaagtgattttgtcgatgagatggcaactcacaaaccactgtgctattatgtcatgaataatgact |
10782446 |
T |
|
| Q |
212 |
gtgtagaagagcaacatgc |
230 |
Q |
| |
|
|||| ||||| |||||||| |
|
|
| T |
10782447 |
gtgtggaagaacaacatgc |
10782465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 7402101 - 7401863
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||||||||| || | |||| |||||||| || |||||||| |||||||| | || |||||| |||||||||||||| |||||||||||||| | |
|
|
| T |
7402101 |
tcaattttgaagaagtattgttccaaagaggatgaggagatgacttcaaatttcacggaatgtgacccgagtctcgacatagtttgcaatgtggtttcaa |
7402002 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| | || | ||||||||| | |||||||| ||||| ||||| |||||||| || |||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
7402001 |
tcctgcctgaggaatacgatgtccagtcagagattaatgaagtggaaagtgactttgtcgatgaaatggcaattcacaagccactatgctattatgtcat |
7401902 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttga |
239 |
Q |
| |
|
||||||||| || || ||||| |||||||| || ||||| |
|
|
| T |
7401901 |
gaataatggctgcgtggaagaacaacatgcggtttttga |
7401863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 126 - 239
Target Start/End: Complemental strand, 7365433 - 7365320
Alignment:
| Q |
126 |
gtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcatgaataatggttgtgtagaagagcaa |
225 |
Q |
| |
|
|||||| ||||| ||||| |||||||| || |||||||||||||||| |||||| ||||||||||||||||||||||||||||| || || ||||| ||| |
|
|
| T |
7365433 |
gtcagagattaatgaagtggaaagtgactttgtcgatgaaatggcaattcacaagccactatgctattatgtcatgaataatggctgcgtggaagaacaa |
7365334 |
T |
|
| Q |
226 |
catgcagtctttga |
239 |
Q |
| |
|
||||| || ||||| |
|
|
| T |
7365333 |
catgcggtttttga |
7365320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 20169289 - 20169237
Alignment:
| Q |
178 |
aaaccactatgctattatgtcatgaataatggttgtgtagaagagcaacatgc |
230 |
Q |
| |
|
|||||| |||| |||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
20169289 |
aaaccaatatgttattatgttatgaataatggttgtgtagagtagcaacatgc |
20169237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 29701 - 29945
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| || ||||||| ||||||||||| || || |||||||| |||||||||||||||| |
|
|
| T |
29701 |
tcaattttgaagaaagatcatcccaaagaggatgaagaaatgacctcagatttcaccggatctgaccccagcctagacatagtatgcaatgtggtttcta |
29800 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||| |
|
|
| T |
29801 |
tcctaccagtggaatacgacgttcagtcagaaattaatgaagttgaaagtgatttcgtcgatgaaatggaaattcacaagccactatgctattatgtcat |
29900 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||| |||||||| |
|
|
| T |
29901 |
gaataatggttatgtagaagagcatcatgcagtcttagaaaaacc |
29945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 169; Significance: 9e-91; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 17422969 - 17422725
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||| |
|
|
| T |
17422969 |
tcaatcttgaagaaagatcatcccaaagaggatgaggagatgacttcgaatttcacgggatctgacccgagcctcgacatagtttgcaatgtggtttcta |
17422870 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| ||||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||| |
|
|
| T |
17422869 |
tcctacctgtggaatacgatgtccagtcagaaattaacaaagtggaaagtgatttcgtcgatgaaatggcaacccacaagccactatgctcttatgtcat |
17422770 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
17422769 |
gaataatggttgtgtagaagagcaacatgcagtcttcgaaaaacc |
17422725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 22348879 - 22348635
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||| ||||| || || || |||||||||||||| | |
|
|
| T |
22348879 |
tcaattttaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcattggatctgaccccagtcttgatatcgtatgcaatgtggtttcga |
22348780 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| ||| ||||||||| |||||||||| |||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
22348779 |
tcctacctgtgaaatacgacgttcagtcagaagttaatgaagttgaaagtgacttcgtcgacgaaatggcaactcacaagccactatgctattatgttat |
22348680 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
|||||||||||||||||| || |||||||| |||||||||||||| |
|
|
| T |
22348679 |
gaataatggttgtgtagaggaacaacatgctgtctttgaaaaacc |
22348635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 1735377 - 1735606
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||| |||||||||||||| | || || || || || |||||||| |||||||| | ||||||||| ||||| |||||||| || ||||||||||| | |
|
|
| T |
1735377 |
tcaattctgaagaaagatcattcaaaagaagacgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtctgtaatgtggtttcca |
1735476 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|||| || ||||||||||| | |||||||| ||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1735477 |
tcttgcctgtggaatacgatgtccagtcagatattaatgaagtcgaaagtgacttcgtcgatgagatggcaactcacaaaccactatgctattatgtcat |
1735576 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgc |
230 |
Q |
| |
|
||||||||| ||||| ||||| |||||||| |
|
|
| T |
1735577 |
gaataatggctgtgtggaagaacaacatgc |
1735606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 22067842 - 22068081
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || |
|
|
| T |
22067842 |
tcaattttgaagagaggtcatcctaaggaggatgaagaaatgacttcgaatttcactggatctgaccc-agtctcgatatagtgtgcaatgtggtgtcag |
22067940 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
| || || ||||||||||||| |||||| ||| |||| |||||||||||||| ||| |||| ||||||| | || || ||| |||||||||||||||| |
|
|
| T |
22067941 |
tttttcctgtggaatacgacgttcagtcggaagttaatgaagttgaaagtgacttcatcgacaaaatggccatccataagccattatgctattatgtcat |
22068040 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaa |
241 |
Q |
| |
|
||| ||||| ||||| |||||||| ||||| || ||||||| |
|
|
| T |
22068041 |
gaacaatggctgtgttgaagagcagcatgccgtttttgaaa |
22068081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 37708 - 37464
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || || ||||| |||| |
|
|
| T |
37708 |
tcaattttgaagaaagactttcccaaggaggatgaagatatgacttcgaatttcactggatctgaccctagtctcgacatagtatgtaacgtggtgtcta |
37609 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| |||||||| |||| ||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
37608 |
tcctacctgtggaatatgacgttcaatcagaaattaacgaagtcgaaagtgatttcgtcgacgaaatggctactcacaaaccactatgttattatgtcat |
37509 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
37508 |
gaataatggatgtgtggaagagcaacatgcagtatttgaaaaacc |
37464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 5653 - 5409
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||| | ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||| || | |
|
|
| T |
5653 |
tcaattctaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcaa |
5554 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
| |||| ||||||||||||| |||||||||| |||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
5553 |
ttctacctgtggaatacgacgttcagtcagaagttaatgaagttgaaagtgacttcgtcgacgaaatggcaacacacaagccactatgttattatgtcat |
5454 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
5453 |
gaataatggttgtgtagaagaacaacatgctgtctttgaaaaacc |
5409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 26287 - 26531
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || | |
|
|
| T |
26287 |
tcaattttgaagaaagactctctcaaggaggatgaagagatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaacgtggtgtcca |
26386 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| |||||||| |||| ||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
26387 |
tcctacctgtggaatatgacgttcaatcagaaattaacgaagtcgaaagtgatttcgtcgacgaaatggaaactcacaaaccactatgttattatgtcat |
26486 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
|||||| || ||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
26487 |
gaataacggatgtgtggaagagcaacatgcagtatttgaaaaacc |
26531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 67048 - 67292
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||| | ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||| || | |
|
|
| T |
67048 |
tcaattctaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcaa |
67147 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| ||||||||||||| |||||||||| |||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
67148 |
tcctacctgtggaatacgacgttcagtcagaagttaatgaagttgaaagtgacttcgtcgacgaaatggcaacacacaagccactatgttattatgtcat |
67247 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
67248 |
gaataatggttgtgtagaagaacaacatgttgtctttgaaaaacc |
67292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 139088 - 138847
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||| || |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
139088 |
tcaatcttaaagaaagaccatcccaaagaggatgaagaaatgacttcgaatttcactgggtctgaccctagtctcgacatagtatgcaatgtggtttcaa |
138989 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| || |||||||||| |||||||||| |||| |||||||||||||| |||||||| |||||||| || ||||| |||||||| ||||||||||| |
|
|
| T |
138988 |
tcctacctgtagaatacgacgttcagtcagaagttaatgaagttgaaagtgacttcgtcgacgaaatggcgacacacaagccactatgttattatgtcat |
138889 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaa |
242 |
Q |
| |
|
||||||| ||||||||||||| |||||||| ||||||||||| |
|
|
| T |
138888 |
gaataatagttgtgtagaagaacaacatgctgtctttgaaaa |
138847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 11553 - 11797
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||| | ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| || || || ||||||||||| || | |
|
|
| T |
11553 |
tcaattataaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtcttgatatcgtatgcaatgtggtctcaa |
11652 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| ||||||||||||| |||||| ||| |||| |||||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
11653 |
tcctacctgtggaatacgacgttcagtcggaagttaatgaagttgaaagtgacttcgttgacgaaatggcaactcacaagccactatgctattatgtcat |
11752 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||||| |||||||| || ||||||||||| |
|
|
| T |
11753 |
gaataatggttgtgtagaagaacaacatgctgtgtttgaaaaacc |
11797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 21511069 - 21511313
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || || | ||||||||||| || | |
|
|
| T |
21511069 |
tcaattttaaagaaagatcatcccaaggaggatgaagaaatgacttcaaatttcactggatctgaccccagtcttgatatcatatgcaatgtggtctcga |
21511168 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|||||| ||||||||||||| ||||| ||| |||||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||||| ||| | |
|
|
| T |
21511169 |
tcttacttgtggaatacgacgttcagttggaagttaacgaagtggaaagtgattttgtcgacgaaatggcaactcacaagccactatgctattacgtcgt |
21511268 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
21511269 |
gaataatggttgtgtagaagaacaacatgccgtctttgaaaaacc |
21511313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 144; Significance: 8e-76; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 22805953 - 22805718
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
|||||| | ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| | |||||| ||||| ||||||||||| || | |
|
|
| T |
22805953 |
tcaattctaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccaatctcgatatagtatgcaatgtggtctcaa |
22805854 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
|| |||| ||||||||||||| |||||||||| |||| |||||||||||||| ||||||| ||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
22805853 |
tcctacctgtggaatacgacgttcagtcagaagttaatgaagttgaaagtgacatcgtcgacgaaatggcaacacacaagccactatgttattatgtcat |
22805754 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctt |
236 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
22805753 |
gaataatggttgtgtagaagaacaacatgctgtctt |
22805718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 100 - 230
Target Start/End: Complemental strand, 41380414 - 41380284
Alignment:
| Q |
100 |
atcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtca |
199 |
Q |
| |
|
||||| || ||||||||||| | |||||| ||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
41380414 |
atcttgcctgtggaatacgatgtccagtcaaaaattaatgaagtcgaaagtgacttcgtcgatgagatggcaactcacaaaccactgtgctattatgtca |
41380315 |
T |
|
| Q |
200 |
tgaataatggttgtgtagaagagcaacatgc |
230 |
Q |
| |
|
|||||||||| ||||| ||||| |||||||| |
|
|
| T |
41380314 |
tgaataatggctgtgtggaagaacaacatgc |
41380284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 3 - 245
Target Start/End: Complemental strand, 126873 - 126631
Alignment:
| Q |
3 |
aattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttctatc |
102 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||| || || || ||||||||||| || ||| |
|
|
| T |
126873 |
aattttaaagaaagatcatcccaatgaggatgaagaaatgacttcaaatttcacgggatctgaccccagtcttgatatcgtatgcaatgtggtctcgatc |
126774 |
T |
|
| Q |
103 |
ttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcatga |
202 |
Q |
| |
|
|||| ||||||||||||| | |||| ||| ||||||||||||||||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
126773 |
ctacctgtggaatacgacgtttagtcggaagttaacgaagttgaaagtgacttcatcgacgaaatggcaactcacaagccactatgctattatgtcatga |
126674 |
T |
|
| Q |
203 |
ataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||||||| ||||| || || ||||||||||| |
|
|
| T |
126673 |
ataatggttgtgtagaagaacaacacgccgtatttgaaaaacc |
126631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0656 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 5120 - 5364
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || | |
|
|
| T |
5120 |
tcaatcttaaagaaagaccatcccaaggaggatgaagaaatgacttcgaatttcactggatctgacctcagtctcgacatagtatgcaatgtggtatcaa |
5219 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
| |||| ||||||||||||| || ||||||| |||| |||||||||||||| ||||| || |||||||| || || || |||||||| ||||||||||| |
|
|
| T |
5220 |
ttctacctgtggaatacgacgttctgtcagaagttaatgaagttgaaagtgacttcgttgacgaaatggctacgcataagccactatgttattatgtcat |
5319 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||||||||||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
5320 |
gaataatggttgtgtggaagaacaacatgctgtctttgaaaaacc |
5364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0362 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 14519 - 14759
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||| | |||||||| || || |
|
|
| T |
14519 |
tcaattttgaagagagatcatcctaaggaggatgaagaaatgacttcgaatttcactggatctaaccccagtctcgatataatatgcaatgtcgtgtcag |
14618 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
| || || ||||||||||||| |||||||||| |||| |||||||||||||| ||| |||| |||||||| || || || ||| |||||||||||||||| |
|
|
| T |
14619 |
ttttgcctgtggaatacgacgttcagtcagaagttaatgaagttgaaagtgacttcatcgacgaaatggccacccataagccattatgctattatgtcat |
14718 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaa |
241 |
Q |
| |
|
||| ||||| ||||| || || |||||||| |||||||||| |
|
|
| T |
14719 |
gaacaatggctgtgttgaggaacaacatgctgtctttgaaa |
14759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 33627 - 33871
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| || |
|
|
| T |
33627 |
tcaatcttgaagaaagaccatcccaaagaggatgaagaaatgacttcgaatttcattggatctgaccccagtctcgacatagtgtgcaatgtggtgtcag |
33726 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
| || || ||||||||||| | |||||| || |||| |||||||||||||| ||| ||| |||||||| || || || ||| |||||||||||||||| |
|
|
| T |
33727 |
ttttgcctgtggaatacgatgttcagtcgaaagttaatgaagttgaaagtgacttcaccgacgaaatggcgacacataagccattatgctattatgtcat |
33826 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
||| ||||| ||||| ||||| |||||||| || |||||| |||| |
|
|
| T |
33827 |
gaacaatggctgtgttgaagaacaacatgctgtttttgaataacc |
33871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 79 - 245
Target Start/End: Original strand, 69601 - 69767
Alignment:
| Q |
79 |
atagtgtgcaatgtggtttctatcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcaca |
178 |
Q |
| |
|
||||| ||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
69601 |
atagtttgcaatgtggtttctatactacctatggaatacgatgttcagtcagaaattaacgaagtggaaagtgatttcgtcgatgaaatggcaactcaca |
69700 |
T |
|
| Q |
179 |
aaccactatgctattatgtcatgaataatggttgtgtagaagagcaacatgcagtctttgaaaaacc |
245 |
Q |
| |
|
| ||| | | |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
69701 |
agccattgtactattatgtcatgaataatggttgtgtagaagagcaacatccagtcttcgaaaaacc |
69767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 4273 - 4455
Alignment:
| Q |
60 |
atctgaccctagtctcgacatagtgtgcaatgtggtttctatcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtc |
159 |
Q |
| |
|
||||||||| |||||||||||||| ||||||| ||| || ||| ||| ||||||||||| | ||| |||||| |||| |||||||||||||| ||||| |
|
|
| T |
4273 |
atctgaccccagtctcgacatagtatgcaatgcggtatcaatcctacatgtggaatacgaagttcaatcagaagttaatgaagttgaaagtgacttcgtt |
4372 |
T |
|
| Q |
160 |
gatgaaatggcaactcacaaaccactatgctattatgtcatgaataatggttgtgtagaagagcaacatgcagtctttgaaaa |
242 |
Q |
| |
|
|| ||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
4373 |
gacgaaatggcaacacacaagccactatgttattatgtcatgaataatggttgtgtagaagaacaacatgctgtctttgaaaa |
4455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1937 - 2001
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctga |
65 |
Q |
| |
|
||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
1937 |
tcaatcttaaagaaagaccatcccaagtaggatgaagaaatgacttcgaatttcactgggtctga |
2001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 159180 - 159086
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggt |
95 |
Q |
| |
|
||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
159180 |
tcaatcttgaagaaaaaccatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggt |
159086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 156560 - 156422
Alignment:
| Q |
104 |
taccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcatgaa |
203 |
Q |
| |
|
|||| ||||||||| ||| |||||||||| |||| |||||||||||||| ||||| |||||||||| || || || |||||||| |||||||| ||||| |
|
|
| T |
156560 |
tacctgtggaatacaacgttcagtcagaagttaatgaagttgaaagtgacttcgttgatgaaatggtgacgcataagccactatgttattatgttatgaa |
156461 |
T |
|
| Q |
204 |
taatggttgtgtagaagagcaacatgcagtctttgaaaa |
242 |
Q |
| |
|
||||||||||| ||||| ||||||| || |||||||| |
|
|
| T |
156460 |
caatggttgtgttgaagaacaacatgttgtttttgaaaa |
156422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 42379 - 42165
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||| || |||||||| ||||||||||||||||| | |
|
|
| T |
42379 |
tcaattttgaagaaaaatcatcctaaggaggatgaagaaatgacgtcgaatttcactgaatctgatccaagtctcgatatagtgtgcaatgtggtgttag |
42280 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
| || || || |||||||| | | ||| ||| |||||||| | |||| ||| ||| |||||||||||| || || || ||| ||||||| || ||||| |
|
|
| T |
42279 |
ttttgcctgttgaatacgatgtcccgtcggaagttaacgaaatagaaattgacttcaccgatgaaatggctacccataagccattatgctactacgtcat |
42180 |
T |
|
| Q |
201 |
gaataatggttgtgt |
215 |
Q |
| |
|
||| ||||| ||||| |
|
|
| T |
42179 |
gaacaatggctgtgt |
42165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 67; Significance: 7e-30; HSPs: 4)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 75447 - 75661
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||||||||||||||| ||||| || ||||||||||||||||| || |||||||| | ||||||| | |||||||| ||||| ||||||||||| || |
|
|
| T |
75447 |
tcaattttgaagaaagaccatcctaaagaggatgaagaaatgacgtcaaatttcacagaatctgactcaagtctcgatatagtatgcaatgtggtatcag |
75546 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
| || || | ||||| |||| || | ||| |||||||||| ||||||||||| |||||||||||| | || || ||||||||||||||||| || |
|
|
| T |
75547 |
tattgcctattgaatatgacgttccttaagaggttaacgaagtagaaagtgattttaccgatgaaatggctatccataagccactatgctattatgttat |
75646 |
T |
|
| Q |
201 |
gaataatggttgtgt |
215 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
75647 |
gaacaatggttgtgt |
75661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 83876 - 84105
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||||||||||||||| ||| | || ||||||||| ||||||| || |||||||| | ||||||||| |||||||| ||||| ||||||||||| || |
|
|
| T |
83876 |
tcaattttgaagaaagaccatactaaagaggatgaaaaaatgacgtcaaatttcacagaatctgacccaagtctcgatatagtatgcaatgtggtatcag |
83975 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
| || || | ||||| |||| || | ||| |||||||||| ||||||||||| |||||||||||| | || || ||||||||||||||||| || |
|
|
| T |
83976 |
tattgcctattgaatatgacgttccttaagaggttaacgaagtagaaagtgattttaccgatgaaatggctatccataagccactatgctattatgttat |
84075 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgc |
230 |
Q |
| |
|
||| ||||||||||| |||| |||||||| |
|
|
| T |
84076 |
gaacaatggttgtgtcaaagatcaacatgc |
84105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 121548 - 121777
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttcta |
100 |
Q |
| |
|
||||||||||||||||| ||| | || ||||||||| ||||||| || |||||||| | ||||||||| |||||||| ||||| ||||||||||| || |
|
|
| T |
121548 |
tcaattttgaagaaagaccatactaaagaggatgaaaaaatgacgtcaaatttcacagaatctgacccaagtctcgatatagtatgcaatgtggtatcag |
121647 |
T |
|
| Q |
101 |
tcttaccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcat |
200 |
Q |
| |
|
| || || | ||||| |||| || | ||| |||||||||| ||||||||||| |||||||||||| | || || ||||||||||||||||| || |
|
|
| T |
121648 |
tattgcctattgaatatgacgttccttaagaggttaacgaagtagaaagtgattttaccgatgaaatggctatccataagccactatgctattatgttat |
121747 |
T |
|
| Q |
201 |
gaataatggttgtgtagaagagcaacatgc |
230 |
Q |
| |
|
||| ||||||||||| |||| |||||||| |
|
|
| T |
121748 |
gaacaatggttgtgtcaaagatcaacatgc |
121777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 229
Target Start/End: Original strand, 148841 - 149031
Alignment:
| Q |
39 |
aatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcttaccggtggaatacgacggtcagtcagaaattaac |
138 |
Q |
| |
|
|||||| || |||||||| ||||||||| |||||||| ||||| ||||||||||| || || || | || ||||| || | || ||||| ||||| |
|
|
| T |
148841 |
aatgacgtcaaatttcacaaaatctgacccaagtctcgatatagtatgcaatgtggtatcaatattgcatgttgaatatgatgttccttcagaggttaac |
148940 |
T |
|
| Q |
139 |
gaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcatgaataatggttgtgtagaagagcaacatg |
229 |
Q |
| |
|
||||| ||||||||||| |||||||||||| | || || ||| ||||||||||||| ||||| ||||||||||| |||| ||||||| |
|
|
| T |
148941 |
gaagtagaaagtgattttaccgatgaaatggctatccataagccattatgctattatgttatgaacaatggttgtgtcaaagatcaacatg |
149031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 228
Target Start/End: Complemental strand, 48988 - 48766
Alignment:
| Q |
6 |
tttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttctatctta |
105 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| ||||| ||| ||| ||||||||| |||||||||||| | || ||||| || || | || |
|
|
| T |
48988 |
tttgaagaaagatcatccaaaggaggatgaagaaatgacgtcgaacttctctgaatctgacccaagtctcgacatactatgtaatgtagtgtcagtgttg |
48889 |
T |
|
| Q |
106 |
ccggtggaatacgacggtcagtcagaaattaacgaagttgaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcatgaata |
205 |
Q |
| |
|
|| || ||||| |||| || ||||| ||||||||||| ||||||||||| || || || || | || ||||||||||| || ||||| ||||| | |
|
|
| T |
48888 |
cctgttgaatatgacgttccttcagacattaacgaagtggaaagtgattttaccgtcgagattgctatccataaaccactatgttactatgttatgaaca |
48789 |
T |
|
| Q |
206 |
atggttgtgtagaagagcaacat |
228 |
Q |
| |
|
|||||||||| ||| | |||||| |
|
|
| T |
48788 |
atggttgtgtcgaatatcaacat |
48766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 65331 - 65376
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgactt |
46 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
65331 |
tcaattttaaagaaagatcatcccaaagaggatgaagaaatgactt |
65376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 74509 - 74554
Alignment:
| Q |
1 |
tcaattttgaagaaagatcatcccaaggaggatgaagaaatgactt |
46 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
74509 |
tcaattttaaagaaagatcatcccaaagaggatgaagaaatgactt |
74554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 127104 - 127022
Alignment:
| Q |
145 |
gaaagtgatttcgtcgatgaaatggcaactcacaaaccactatgctattatgtcatgaataatggttgtgtagaagagcaaca |
227 |
Q |
| |
|
|||||||||||| ||||||||||| | ||| || ||| ||||||||||||| |||||||||||| |||| ||||| ||||| |
|
|
| T |
127104 |
gaaagtgatttcactgatgaaatggcgattcataagccattatgctattatgttatgaataatggtggtgttgaagatcaaca |
127022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0407 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0407
Description:
Target: scaffold0407; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 3120 - 3034
Alignment:
| Q |
6 |
tttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgt |
92 |
Q |
| |
|
|||||||||||| | || ||||| |||||||||||||| || || || ||| |||||||| |||||||||||||| |||||||| |
|
|
| T |
3120 |
tttgaagaaagacctcccaaaggatgatgaagaaatgacgtcaaacttttctgagtctgacccaagtctcgacatagtatgcaatgt |
3034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0407; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 9586 - 9500
Alignment:
| Q |
6 |
tttgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgt |
92 |
Q |
| |
|
|||||||||||| | || ||||| |||||||||||||| || || || ||| |||||||| |||||||||||||| |||||||| |
|
|
| T |
9586 |
tttgaagaaagacctcccaaaggatgatgaagaaatgacgtcaaacttttctgagtctgacccaagtctcgacatagtatgcaatgt |
9500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0183 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0183
Description:
Target: scaffold0183; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 12927 - 12886
Alignment:
| Q |
174 |
tcacaaaccactatgctattatgtcatgaataatggttgtgt |
215 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||| |||||||| |
|
|
| T |
12927 |
tcacaaaccactatgctattatgttatggataacggttgtgt |
12886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University