View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17984_low_13 (Length: 290)
Name: NF17984_low_13
Description: NF17984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17984_low_13 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0477 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 4506 - 4236
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4506 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
4407 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4406 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaacccaagcaaactctaacagtt |
4307 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4306 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
4236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 3539 - 3275
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| || |
|
|
| T |
3539 |
atgagtcaagaatccaccaattgaagggtggatcagtacttgctcttgtggacaccagcttgtgattaggcctctatctgaaatttcattctcaaattct |
3440 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||| | || || ||||||||||||||| |||||||||| |
|
|
| T |
3439 |
gatgacaaaataaacgagccgccaatgacaagatcaggcctaatgatccacaaaaacggtttcttgctatcggccaaaccccaagcaaattctaacagtt |
3340 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggat |
265 |
Q |
| |
|
||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3339 |
gatttggagtcataactgtaatgctgccgaaattcacataaacaacagactcaggttccttggat |
3275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 2 - 271
Target Start/End: Complemental strand, 4299640 - 4299371
Alignment:
| Q |
2 |
tgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcag |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| || |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4299640 |
tgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacactagcttgcggttaggcctctatttgaaatttcattctcaaactcag |
4299541 |
T |
|
| Q |
102 |
atgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagttg |
201 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||| | ||||||| |||||||||||||| |||||||||||| |
|
|
| T |
4299540 |
atgacaaaataaacaagccgccaatgacaaggtctggcctaatgatccacaaaaatggtttcctgcaattggccaaaccccaagcaatctctaacagttg |
4299441 |
T |
|
| Q |
202 |
atctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||||||||| | || ||||||||| ||||| |
|
|
| T |
4299440 |
ctctggagtcataactgtaacgctgccaaaattcacataaacaaccgatcccggctccttggattcaagc |
4299371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4461435 - 4461680
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4461435 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagcttgctattaggcctctatctgaaatttcattcacaaactca |
4461534 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| | || | |||||||||||||||||||||||||| |
|
|
| T |
4461535 |
gatgacaaaataaacgagccgccaatgacaagatcaggcctaatgatccataaaaagggtttcttgctatcagccaaaccccaagcaaactctaacagtt |
4461634 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaac |
246 |
Q |
| |
|
|||| |||||||||||||| ||||| |||||||| ||||| ||||| |
|
|
| T |
4461635 |
gatcaggagtcataactgtgatgctgccaaaatttacatagacaac |
4461680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 4259974 - 4259714
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
4259974 |
atgagttaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccagctcgcgattaggcctctatccgaaatttcactctcaaactca |
4259875 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||||||| ||||| ||||| | |||||||||||||||||||||||||||| |||||| | ||||| ||| ||||||||||||||||| | || |
|
|
| T |
4259874 |
gatgacaaaataaaggagccaccaataatgaggtcaggcctaatgatccacaaaaagggtttcttgctattggccaatccccaagcaaactctaaaaatt |
4259775 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttcctt |
261 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |
|
|
| T |
4259774 |
gatctggagtcataactgtaatgctgccaaaattcacgtaaacaacagactcaggttcctt |
4259714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 4622454 - 4622722
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| | || |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4622454 |
atgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactca |
4622553 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| | || | ||||||||||||||||||||| |||| |
|
|
| T |
4622554 |
gatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatccacaaaaagggtttcttgctatcagccaaaccccaagcaaactctaatagtt |
4622653 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
||||| ||||||| ||||||||||| ||||||||||| ||||||| || ||||||||||||||| ||||| |
|
|
| T |
4622654 |
gatctcgagtcatcactgtaatgctgccaaaattcacgtaaacaa--gagtcaggttccttggattcaagc |
4622722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 4613538 - 4613268
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4613538 |
atgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattaggcctctatctgaaatttcattcacaaactct |
4613439 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||| || ||||||||||||||||| ||||||||||||||||||||||||| || ||| | ||| | ||||||||||||||||||||| |||| |
|
|
| T |
4613438 |
gatgacaaaacaactgagccgccaatgacaagatcaggcctaatgatccacaaaaagggttgcttgctattcgccaaaccccaagcaaactctaatagtt |
4613339 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
|||| ||||||||| || ||||| |||||||||||||||||||| |||| |||||||||||| ||||| |
|
|
| T |
4613338 |
tttctgcagtcataacggtcatgctcccaaaattcacataaacaacggacttcggttccttggattcaagc |
4613268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 4564023 - 4564293
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||| || ||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
4564023 |
atgagtcaagaatccgccaattgaagggtggttcaatactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactca |
4564122 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||| ||||||||||| || ||||||| |
|
|
| T |
4564123 |
gatgacaaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaagggtttattgcaattggccaacccccaagcaaattccaacagtt |
4564222 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
| | ||| |||||||||||||||||||||||||||||||||||||| || | || ||||||||| ||||| |
|
|
| T |
4564223 |
gttttggtgtcataactgtaatgcttccaaaattcacataaacaacggatcccggctccttggattcaagc |
4564293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 4579744 - 4580014
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4579744 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagctcgttattaggcctctatctgaaatttcattcacaaactcc |
4579843 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||| | |||||||| |||||||| || |||||||||||||||||||||| || ||| | ||| | |||||||| |||||||||||||||| |
|
|
| T |
4579844 |
gatgacaaaacagctgagccgccgatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgctaaaccccatgcaaactctaacagtt |
4579943 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
|||| |||||||||||| | ||| |||||||||||||||||||| ||| ||||||||||||| ||||| |
|
|
| T |
4579944 |
tttctgcagtcataactgtcaagctcccaaaattcacataaacaacagacctaggttccttggattcaagc |
4580014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 4626263 - 4626533
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4626263 |
atgagttaagaatccaccaattgaaggatggttcagtactttctcttgcggacaccagcttgcgattaggcctctatctgaaatttcattctcaaactcg |
4626362 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||| ||||||| ||||| ||||| ||||| ||||||||||||||||||||||||| |||||| | || | |||||||||||||||||||||||||| |
|
|
| T |
4626363 |
gatgacgaaataaatgagccaccaatcacaagatcaggcctaatgatccacaaaaagggtttcttgctatcagccaaaccccaagcaaactctaacagtt |
4626462 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
| ||||||||||||| ||| ||| ||||| |||||||||||||| |||| ||||||||| || ||||| |
|
|
| T |
4626463 |
tctgtggagtcataactataacgctgccaaagttcacataaacaacagactttggttccttgaattcaagc |
4626533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 4256431 - 4256174
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| ||| | ||||| |||||||| |||| |||| |
|
|
| T |
4256431 |
atgagtcaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccaactctcgattagtcctctatccgaaa-------------ctca |
4256345 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||| | |||||| | ||||| ||| |||||||||||||||||||||| |
|
|
| T |
4256344 |
gatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatacacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagtt |
4256245 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||| |
|
|
| T |
4256244 |
gatctggagtcataactgtaatgctgccaaaattcacgtaaacaacagactcaggttccttggattcaagc |
4256174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4592543 - 4592788
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||| |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
4592543 |
atgagtcaagaatccaccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattacgcctctatctgaaatttcattcacaaactcc |
4592642 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||| || | ||| ||||||||||| ||||||||||||||||||||||| | ||| || ||||||| ||||||||||||||||||||||| || |
|
|
| T |
4592643 |
gatgacaaaacaattgtgccaccaatgacaagatcaggcctaatgatccacaaaaaaggtttattgcaattggccaaaccccaagcaaactctaacattt |
4592742 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaac |
246 |
Q |
| |
|
||| | |||||||||||| ||| || ||||||||||||||||| |
|
|
| T |
4592743 |
tctcttcattcataactgtaaggctgccgaaattcacataaacaac |
4592788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 4516633 - 4516875
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||| |||| |||||| ||||||| |||| |||||| ||||||||||| || |||| ||||||||| ||| |||||||| |||| || |
|
|
| T |
4516633 |
atgagtcaagaatcctccaactgaaggatggttcaacactttctcttgcggacaccagcttgctattacgcctctatccgaagtttcattcacaaaatcg |
4516732 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| | |||||| | |||| |||||||||||| ||||||||||||| |
|
|
| T |
4516733 |
gatgacaaaataaccgagccaccaatgacaaggtcaggcctaataatccacaaaaaaggtttcttgctgttggccaaaccccaagcgaactctaacagtt |
4516832 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaac |
243 |
Q |
| |
|
||||||||||||| || || ||||||||||||||||||||||| |
|
|
| T |
4516833 |
gatctggagtcatgaccgtgatgcttccaaaattcacataaac |
4516875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 4598483 - 4598753
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| | |||||||||||| |||||||||| |||| || |||||||||||||||||||||| ||||||| |
|
|
| T |
4598483 |
atgagttaagaatccaccaattgaaggatggtttaatacttgctcttgcagacaccagcttgcaactaagcctctatctgaaatttcattcacaaactcc |
4598582 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||| |||||| | ||||| ||||||||||||||| ||||||| | |
|
|
| T |
4598583 |
gatgacaaaacaaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggtttcttgctattggccaaaccccaagcaaagtctaacaact |
4598682 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
|||| |||||| || || ||||| |||||||||||||||||||| ||| ||||| |||||| ||||| |
|
|
| T |
4598683 |
tttctgcagtcatcaccgttatgctcccaaaattcacataaacaacagaccttggttcattggattcaagc |
4598753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 271
Target Start/End: Original strand, 4585949 - 4586218
Alignment:
| Q |
2 |
tgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcag |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||| || ||||| | ||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4585949 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcgattaggcctctatctgaaatttcattcttaaactcag |
4586048 |
T |
|
| Q |
102 |
atgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagttg |
201 |
Q |
| |
|
||||||||| || || || ||||||||||| ||||| ||||||||||| ||||| || ||| | ||||| ||||||||||||||||||||| |||| |
|
|
| T |
4586049 |
atgacaaaaccaaggaaccaccaatgacaagatcaggtctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
4586148 |
T |
|
| Q |
202 |
atctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
|||| |||||||||||| |||| |||||||||||||||||||| ||| |||||||| ||| ||||| |
|
|
| T |
4586149 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctttgattcaagc |
4586218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 4557437 - 4557707
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| | |||||||||||| || ||||||| ||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
4557437 |
atgagtcaagaatccaccaattgaaggatggtttaatacttgctcttgcgggcaccagcccgcgattaggcctctatctgaaatttcattgacaaactcc |
4557536 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||| || ||||| || |||||||| || |||||||||||||||||||||| || ||| | ||| | |||||||| |||||||||||||||| |
|
|
| T |
4557537 |
gatgacaaaacaactgagccaccgatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgctaaaccccatgcaaactctaacagtt |
4557636 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
|||| ||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||| ||||| |
|
|
| T |
4557637 |
tttctgccgtcataactgtcatgctcccaaaattcacataaacaacggacctcggttccttggattcaagc |
4557707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 4602101 - 4602371
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||| || || ||||||||||||| |||| ||||||||||||||| || || |||||||||||||||||||||||||| ||||||| |
|
|
| T |
4602101 |
atgagtcaagaatccgccgatcgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcatttgtaaactca |
4602200 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||| | ||| | ||||||| |||||||||||| || ||||| | || |
|
|
| T |
4602201 |
gatgacaaaatcactgagccaccaatgacaagatcaggcctaatgatccacaaaaatggtttatggcaattggccaaaccccaagcgaattctaataatt |
4602300 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
||| || ||||||||||||||||| |||||||||||||||||||| || | || ||||||||| ||||| |
|
|
| T |
4602301 |
gatggggtgtcataactgtaatgctgccaaaattcacataaacaacggatcccggctccttggattcaagc |
4602371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4470115 - 4470360
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| || | ||||||||||||||||||||| |||| ||| ||| |
|
|
| T |
4470115 |
atgagtcaagaatccaccgattgaagggtggttcagtacttgctcttgaggacaccagttcacgattaggcctctatctgaaattccatttacaatctct |
4470214 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
||||| |||| | |||||||||||||||||| || |||||||||||||||||||||| || ||| | ||| | |||||||||||||||||||||||||| |
|
|
| T |
4470215 |
gatgagaaaactaccgagccgccaatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgccaaaccccaagcaaactctaacagtt |
4470314 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaac |
246 |
Q |
| |
|
||||||| ||||||||| | ||| || ||||| ||||| ||||| |
|
|
| T |
4470315 |
tctctggagacataactgtgacgctgccgaaatttacatagacaac |
4470360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 4514941 - 4514696
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||| || || |||||||||||||||| |||||||||| |||||||| |
|
|
| T |
4514941 |
atgagtcaagaatccgccaattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatctgcaatttcattcacaaactca |
4514842 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|| ||||||| | ||||| ||||||||||| ||||||||||||||||| ||||||| |||||| | ||||| ||||||||||||||||||||||| || |
|
|
| T |
4514841 |
gacgacaaaaccactgagccaccaatgacaagatcaggcctaatgatccataaaaaggttttcttgctattggccaaaccccaagcaaactctaacaatt |
4514742 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaac |
246 |
Q |
| |
|
|| |||| ||||| || ||||| |||||||| ||||||||||| |
|
|
| T |
4514741 |
tctccggagacataatcgtgatgctaccaaaattaacataaacaac |
4514696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 3172054 - 3172298
Alignment:
| Q |
2 |
tgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcag |
101 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||| |||| |||||| |||||||| || || ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
3172054 |
tgagtcaagaatccgccaattgaaggatggttcaacactttctcttgcggacaccaacttgctattaggcctctatctgaaatttcattcacaaactccg |
3172153 |
T |
|
| Q |
102 |
atgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagttg |
201 |
Q |
| |
|
||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| |||||| | |||| |||||||||||||||||||| | || |
|
|
| T |
3172154 |
atgacaaaacaaccgagccaccaatgacaagatcaggcctaataatccacaaaaagggtttcttgctgttggctaaaccccaagcaaactctaataattt |
3172253 |
T |
|
| Q |
202 |
atctggagtcataactgtaatgcttccaaaattcacataaacaac |
246 |
Q |
| |
|
||| ||| ||||||| | ||||| |||||||| ||||||||||| |
|
|
| T |
3172254 |
ctcttgagacataactatgatgctgccaaaatttacataaacaac |
3172298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 4617334 - 4617604
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||| || |||||||||||||||| |||| |||||||||||||| || || |||||||||||||||| ||||||||| ||||||| |
|
|
| T |
4617334 |
atgagtcaagaatcctccgattgaagggtggttcaacactttgtcttgtggacaccaacttgctattaggcctctatctgcaatttcatttgtaaactca |
4617433 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
||||| ||||| | ||||| ||||||||||| |||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||| || | | || |
|
|
| T |
4617434 |
gatgagaaaatcactgagccaccaatgacaagatcaggccttatgatccacaaaaatgatttcttgcaattggccaaaccccaagcaaattccagtaatt |
4617533 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
| || || ||||||||||||||||| || ||||||||||||||||| || | || ||||||||| ||||| |
|
|
| T |
4617534 |
gctcgggtgtcataactgtaatgctgccgaaattcacataaacaactgatcccggctccttggattcaagc |
4617604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4506169 - 4506414
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| || | |||| |||||||| ||||||||| || || |||| |||||||||||||||||| ||||||| |
|
|
| T |
4506169 |
atgagtcaagaatccaccaattgaagggtgatttaacactttctcttgtgaacaccagcttgctataaggcttctatctgaaatttcatttgcaaactct |
4506268 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|| ||||||| | ||||| ||||| ||||| ||||||||||||||||||||||||| |||||| | ||||| ||||||||||||||||||||| | || |
|
|
| T |
4506269 |
gaagacaaaaccactgagccaccaattacaagatcaggcctaatgatccacaaaaagggtttcttgctattggccaaaccccaagcaaactctaaaaatt |
4506368 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaac |
246 |
Q |
| |
|
|| |||| ||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
4506369 |
tctccggagacataattgtgatgcttccaaaattcacataaacaac |
4506414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 2 - 271
Target Start/End: Original strand, 4571285 - 4571554
Alignment:
| Q |
2 |
tgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcag |
101 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||| ||||| |||||| | ||||| | |||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
4571285 |
tgagtcaagaaaccaccaattgaaggatggttcaatactttctcttgcgagcaccaaccagcaattaggcctctatctgaaatttcattcacaaactccg |
4571384 |
T |
|
| Q |
102 |
atgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagttg |
201 |
Q |
| |
|
||||||||| || ||||| ||||||||||| || ||||||||||||||||||||| || ||| | ||| | |||||||| |||||||||||||||| |
|
|
| T |
4571385 |
atgacaaaacaactgagccaccaatgacaagatcgggcctaatgatccacaaaaagagttgcttgctatttgctaaaccccatgcaaactctaacagttt |
4571484 |
T |
|
| Q |
202 |
atctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
|||| |||||||||||| |||| |||||||||||||||||||| ||| |||||||| ||| ||||| |
|
|
| T |
4571485 |
ttctgaagtcataactgtcctgctcccaaaattcacataaacaacggacctcggttcctttgattcaagc |
4571554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4574620 - 4574865
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||||||||||||||| | |||| ||||||||| ||||| ||||||||||||||| || || ||||| ||||||||||||||||| ||| ||| ||| |
|
|
| T |
4574620 |
atgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatca |
4574719 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
||||| |||| | |||||| ||||||||||| ||||||||||||||||||||||||| ||| || | |||| |||||||||||||||||||| || | |
|
|
| T |
4574720 |
gatgagaaaaccaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggttttttgctgttggccaaaccccaagcaaactctacgagct |
4574819 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaac |
246 |
Q |
| |
|
||| ||| |||||| || ||||| |||||||| ||||||||||| |
|
|
| T |
4574820 |
tctctcgagacataacagtgatgctgccaaaatttacataaacaac |
4574865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 4266986 - 4266741
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| || || ||||| ||||||||||||||||| || ||| ||| |
|
|
| T |
4266986 |
atgagtcaagaatccaccaatcgaagggtggttcaacactttatcttgtggacaccaacttgctattagtcctctatctgaaatttctttaaaaaaatca |
4266887 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||| || ||||| ||||||||||| ||||||||||| ||||||||||| | ||||| | |||| ||||||||||||||||||||| || | |
|
|
| T |
4266886 |
gatgacaaaacaactgagcccccaatgacaagatcaggcctaattatccacaaaaaagggttcttgctgttggccaaaccccaagcaaactctaagagct |
4266787 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaac |
246 |
Q |
| |
|
||| | | ||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
4266786 |
tctctcgtgacataactgtgatgctaccaaaatttacataaacaac |
4266741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 4490175 - 4489930
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| ||| | ||||||||||||||| || || ||||| ||||||||||||||||| ||| ||| ||| |
|
|
| T |
4490175 |
atgagtcaagaatccaccaattgaagggtgattcaataccttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatca |
4490076 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||| | ||||| ||||| ||||| ||||||||||||||||||||||||| |||||| | |||| ||||||||| ||||||||||| || | |
|
|
| T |
4490075 |
gatgacaacacctgtgagccaccaataacaagatcaggcctaatgatccacaaaaagggtttcttgctgttggccaaaccccatgcaaactctaatagct |
4489976 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaac |
246 |
Q |
| |
|
||| ||| |||||| || ||||| |||||||| ||||||||||| |
|
|
| T |
4489975 |
tctctcgagacataacagtgatgctgccaaaatttacataaacaac |
4489930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 4568368 - 4568607
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||| ||||||||||| ||||||||||| || ||| |||||||||| ||| || ||||| ||||||| |
|
|
| T |
4568368 |
atgagtcaagaatcgtccaactgaagggtggttcaacacttgctcttgcggacaccagcttgctatttggcctctatccgaagttccattcacaaactcg |
4568467 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||| | |||||| | |||| ||||| |||| ||||||||| | |
|
|
| T |
4568468 |
gatgacaaaataactgagccaccaatgacaagctaaggcctaatgatccacaaaaaaggtttcttgctgttggcaaaacctcaagagaactctaac---t |
4568564 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaac |
243 |
Q |
| |
|
| |||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
4568565 |
gctctggagtcataaccatagtgcttccaaaattcacataaac |
4568607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 4457906 - 4458157
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||| || |||||||||||||||| |||| |||||||||||||| || || |||| ||||||||| ||| |||||||| |||| || |
|
|
| T |
4457906 |
atgagtcaagaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgctattaagcctctatcagaagtttcattcacaaaatcc |
4458005 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccac-aaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagt |
199 |
Q |
| |
|
|||||||||| || |||||| ||||||||||| ||||||||| | |||||| ||||||| |||||| | |||| |||| |||||||||| ||||| || |
|
|
| T |
4458006 |
gatgacaaaacaaccgagccaccaatgacaagatcaggcctagttatccacaaaaaaggttttcttgctgttggccaaaacccaagcaaattctaagagc |
4458105 |
T |
|
| Q |
200 |
tgatctggagtcataactgtaatgcttccaaaattcacataaacaaccgact |
251 |
Q |
| |
|
| ||| ||| ||||||||| |||||||||||||| ||||||| ||| |||| |
|
|
| T |
4458106 |
ttctcttgagacataactgtgatgcttccaaaatttacataaataacagact |
4458157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4481005 - 4481250
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||| || |||||||||||||||| |||| ||||||||||||||| || || ||||||||||||| ||||||||| ||| | ||||| |
|
|
| T |
4481005 |
atgagtcaagaatccgccgattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatttgaaatttctttcaaatactca |
4481104 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||| | | ||||| ||||||||||| | || |||||| |||||||||||| ||| || | ||||| |||||||||||||||||||| |||| |
|
|
| T |
4481105 |
gatgacaacaccactgagccaccaatgacaagattagacctaataatccacaaaaagttttttttgctattggcaaaaccccaagcaaactctaagagtt |
4481204 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaac |
246 |
Q |
| |
|
||| ||| ||||| ||| ||||| |||||||| ||||||||||| |
|
|
| T |
4481205 |
tctcttgagacataattgtgatgctgccaaaatttacataaacaac |
4481250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 4504217 - 4503972
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||| || |||||||||||||||| |||| |||||||||||||| || || | || ||||||| ||| |||||||| |||| ||| |
|
|
| T |
4504217 |
atgagtcaagaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgctacaagtcctctattagaagtttcattcacaaaatca |
4504118 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||| | ||||| ||||| ||||| ||||||||||| ||||||||||| | |||||| | ||||| ||||||||||||||||||||||| || |
|
|
| T |
4504117 |
gatgacaacacctctgagccaccaataacaagatcaggcctaataatccacaaaaaaggtttcttgctattggccaaaccccaagcaaactctaacaatt |
4504018 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaac |
246 |
Q |
| |
|
|||| || ||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
4504017 |
tatcttaagacataactgtaatgctgccaaaatttacataaacaac |
4503972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 4560818 - 4561011
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||||||||||||||| | ||| |||||||||| ||||| ||||||||||||||| || || ||||| ||||||||||||||||| ||| ||| ||| |
|
|
| T |
4560818 |
atgagtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttc-aaaaatca |
4560916 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaa |
195 |
Q |
| |
|
||||| |||| | |||||| ||||||||||| ||||||||||||||||| ||||| | |||||| | |||| ||||||||||||||||||||| |
|
|
| T |
4560917 |
gatgagaaaaccaccgagccaccaatgacaagatcaggcctaatgatccataaaaatggtttcttgctgttggccaaaccccaagcaaactctaa |
4561011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 4391940 - 4391794
Alignment:
| Q |
8 |
aagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattagg----cctctatctgaaatttcattctcaaactcagat |
103 |
Q |
| |
|
|||||||||| |||| |||||||||||| ||||||||||| |||||||| || || | ||| |||||||||||||||||||||||| ||||| || |
|
|
| T |
4391940 |
aagaatccacaaattcaagggtggttcaatacttgctctttcggacaccatcttgcgactagatagacctctatctgaaatttcattctcatactcatat |
4391841 |
T |
|
| Q |
104 |
gacaaaataaacgagccgccaatgacaaggtcaggcctaatgatcca |
150 |
Q |
| |
|
|||||| | | || | |||||||||||||||| ||||||||||||| |
|
|
| T |
4391840 |
aacaaaacacatgacctgccaatgacaaggtcaagcctaatgatcca |
4391794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4493267 - 4493346
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctg |
80 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||| | || ||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
4493267 |
atgagtcaagaatccaccaatcgaatggtggttcagcagtttctcttgtggacaccaactagcaattaggcctctatctg |
4493346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 3086732 - 3087002
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| || ||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
3086732 |
atgagtcaagaatccaccaattgaagggtgattcaatacttgctcttgcggacaccagcttgcgattagacctctatctgaaatttctttctcaaactca |
3086831 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||||| | ||||| ||||||||||||||||||||| |||| |
|
|
| T |
3086832 |
gatgacataataaaggagccgccaatgacaagatcaggcctaatgatccacaaaaatggtttcttgctattggccaaaccccaagcaaactctaatagtt |
3086931 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
| ||| ||||||||||||||||||| |||||| ||||||||||||| |||||| || |||| ||| ||||| |
|
|
| T |
3086932 |
gctcttgagtcataactgtaatgctgccaaaactcacataaacaacagactcaagtccctttgattcaagc |
3087002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 134; Significance: 9e-70; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 1281426 - 1281671
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||| ||||||||||||||| || || ||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
1281426 |
atgagtcaagaatccaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcgcaaagtca |
1281525 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||| | |||||| | ||| | || |||||||||||| || |||| |
|
|
| T |
1281526 |
gatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattcctgaagtt |
1281625 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaac |
246 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1281626 |
gctctggagtcataactgtaatgcttccgaaattcacataaacaac |
1281671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 271
Target Start/End: Original strand, 1674542 - 1674808
Alignment:
| Q |
5 |
gtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcagatg |
104 |
Q |
| |
|
||||||||||| || |||||||||||||||| |||| ||||||||||||||| | | ||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
1674542 |
gtcaagaatccgccgattgaagggtggttcaacactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttcataaactcagatg |
1674641 |
T |
|
| Q |
105 |
acaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagttgatc |
204 |
Q |
| |
|
|||||| | ||||| ||||||||||| ||||||||| ||||||||||||| | |||||| |||| || |||||||||||||||||| || |||||||| |
|
|
| T |
1674642 |
acaaaaccactgagccaccaatgacaagatcaggcctagtgatccacaaaaaaggtttcttgcaatcggccaaaccccaagcaaactccaatagttgatc |
1674741 |
T |
|
| Q |
205 |
tggagtcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagc |
271 |
Q |
| |
|
|||||||||||| ||||||| || |||||||||||||||||||| | ||||| |||||| ||||| |
|
|
| T |
1674742 |
tggagtcataacaataatgctaccgaaattcacataaacaaccgatcccggttcgttggattcaagc |
1674808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 16686087 - 16685817
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
|||||| ||||||||||| |||||||| ||||| | |||||||||||| || ||||||||||| ||||||| ||||||||| |||||||||| ||||||| |
|
|
| T |
16686087 |
atgagttaagaatccaccgattgaaggatggtttaatacttgctcttgcgggcaccagctcgcgattaggcttctatctgagatttcattcttaaactca |
16685988 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||| | || |||| ||||||||| |||| |||||||||||| ||| || ||| | ||||||||||||||||||||||||||| |||| |
|
|
| T |
16685987 |
gatgacaaaaccacggaaccgcaaatgacaagatcagacctaatgatccattgaaaatgttgcttgctattggtcaaaccccaagcaaactctaatagtt |
16685888 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaaccg-actcaggttccttggatgcaagc |
271 |
Q |
| |
|
|||| |||||||||||| ||||| |||||||||||||||||||| | |||| |||||||||||| ||||| |
|
|
| T |
16685887 |
tttctgcagtcataactgtcatgctcccaaaattcacataaacaacggaactc-ggttccttggattcaagc |
16685817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 20863653 - 20863467
Alignment:
| Q |
11 |
aatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcagatgacaaaa |
110 |
Q |
| |
|
||||||||||||||||| ||||||| || | ||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||||||| |||| |
|
|
| T |
20863653 |
aatccaccaattgaaggatggttcaacaccttctcttgtggacaccaactcgcgattaggcctctatctgaaatttcattcacaaacgcagatgaaaaaa |
20863554 |
T |
|
| Q |
111 |
taaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaaca |
197 |
Q |
| |
|
| | |||||| ||||||||||| ||||||||||||||||||||||||| |||||| | |||| ||||||||| ||||||||||||| |
|
|
| T |
20863553 |
tcaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggtttcttgctgttggccaaaccccatgcaaactctaaca |
20863467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 94; Significance: 6e-46; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 24103311 - 24103556
Alignment:
| Q |
1 |
atgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactca |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| | |||| |||||||||||||| || || ||||| ||||||||||||| ||| || ||| ||| |
|
|
| T |
24103311 |
atgagtcaagaatccaccaatcgaagggtggtttaacactttatcttgtggacaccaacttgctattagtcctctatctgaaacttctttaaaaaaatca |
24103410 |
T |
|
| Q |
101 |
gatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaccccaagcaaactctaacagtt |
200 |
Q |
| |
|
|||||||||| || ||||| ||||||||||| ||||||||||| ||||||||||| | ||||| | ||||| ||||||||||||||||||||| || | |
|
|
| T |
24103411 |
gatgacaaaacaactgagcccccaatgacaagatcaggcctaattatccacaaaaaagggttcttgctattggccaaaccccaagcaaactctaagagct |
24103510 |
T |
|
| Q |
201 |
gatctggagtcataactgtaatgcttccaaaattcacataaacaac |
246 |
Q |
| |
|
||| | | ||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
24103511 |
tctctcgtgacataactgtgatgctaccaaaatttacataaacaac |
24103556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 27999918 - 27999747
Alignment:
| Q |
2 |
tgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcag |
101 |
Q |
| |
|
||||||||||| || | |||||||||||||||| |||| ||||||||||||||| | | ||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
27999918 |
tgagtcaagaacccgctgattgaagggtggttcaaaactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttcctaaactcag |
27999819 |
T |
|
| Q |
102 |
atgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattgg |
173 |
Q |
| |
|
||||||||| | ||||| ||||||||||| | ||||||| ||||||||||||| | |||||| ||||||| |
|
|
| T |
27999818 |
atgacaaaaccactgagccaccaatgacaagattaggcctagtgatccacaaaaaaggtttcttgcaattgg |
27999747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 24106965 - 24107011
Alignment:
| Q |
224 |
cttccaaaattcacataaacaaccgactcaggttccttggatgcaag |
270 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
24106965 |
cttccaaaattcacataaacaacaaactcaggttccttggattcaag |
24107011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 3261 - 3165
Alignment:
| Q |
69 |
ggcctctatctgaaatttcattctcaaactcagatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttctt |
165 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || ||||| | | || ||||||||||||||||||| |||||||||||||| ||||| |||||| |
|
|
| T |
3261 |
ggcctctatctgaagtttcattctcaaactcatataacaaagcacatgatccgccaatgacaaggtcagacctaatgatccacacaaagggtttctt |
3165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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