View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17985_high_4 (Length: 339)

Name: NF17985_high_4
Description: NF17985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17985_high_4
NF17985_high_4
[»] chr5 (20 HSPs)
chr5 (30-339)||(38816630-38816932)
chr5 (165-240)||(19820428-19820503)
chr5 (191-320)||(22423764-22423895)
chr5 (165-232)||(22013364-22013431)
chr5 (165-239)||(42469171-42469245)
chr5 (273-322)||(8420075-8420124)
chr5 (190-239)||(15410483-15410532)
chr5 (187-239)||(6326332-6326384)
chr5 (268-320)||(9929668-9929720)
chr5 (212-288)||(3966500-3966577)
chr5 (180-238)||(15382442-15382500)
chr5 (292-322)||(24906250-24906280)
chr5 (204-237)||(6035472-6035505)
chr5 (187-240)||(21191090-21191143)
chr5 (213-242)||(32766975-32767004)
chr5 (204-240)||(17123037-17123073)
chr5 (187-231)||(21522722-21522766)
chr5 (187-231)||(21533288-21533332)
chr5 (204-240)||(27144452-27144488)
chr5 (211-239)||(27932231-27932259)
[»] chr7 (26 HSPs)
chr7 (165-239)||(27944991-27945065)
chr7 (211-290)||(29787354-29787432)
chr7 (165-239)||(24105629-24105702)
chr7 (187-240)||(11722132-11722185)
chr7 (178-288)||(24339605-24339716)
chr7 (215-320)||(11700803-11700909)
chr7 (190-271)||(19206025-19206107)
chr7 (204-288)||(32308109-32308194)
chr7 (180-240)||(1433419-1433479)
chr7 (160-320)||(7328639-7328805)
chr7 (211-283)||(30731033-30731104)
chr7 (165-236)||(2034392-2034462)
chr7 (189-240)||(2425767-2425818)
chr7 (165-240)||(43027503-43027578)
chr7 (180-239)||(43249958-43250017)
chr7 (198-240)||(8046061-8046103)
chr7 (222-288)||(9933282-9933347)
chr7 (204-271)||(22484014-22484082)
chr7 (198-240)||(23191879-23191921)
chr7 (190-240)||(26733279-26733329)
chr7 (211-280)||(11072294-11072362)
chr7 (292-321)||(17852091-17852120)
chr7 (189-238)||(49107795-49107844)
chr7 (292-320)||(15680900-15680928)
chr7 (204-240)||(20549780-20549816)
chr7 (211-239)||(28155566-28155594)
[»] chr6 (28 HSPs)
chr6 (187-288)||(10294079-10294181)
chr6 (180-240)||(9027143-9027203)
chr6 (165-240)||(853893-853968)
chr6 (180-288)||(16766662-16766771)
chr6 (180-240)||(5000660-5000720)
chr6 (180-320)||(5732474-5732604)
chr6 (165-233)||(8365560-8365628)
chr6 (221-320)||(8805524-8805625)
chr6 (167-239)||(12696277-12696348)
chr6 (180-288)||(9107355-9107464)
chr6 (189-240)||(9629357-9629408)
chr6 (165-240)||(30866178-30866253)
chr6 (165-239)||(6389693-6389767)
chr6 (190-240)||(9658854-9658904)
chr6 (202-240)||(19040339-19040377)
chr6 (165-233)||(3398569-3398637)
chr6 (180-240)||(7938081-7938141)
chr6 (191-239)||(13851712-13851760)
chr6 (273-320)||(426478-426525)
chr6 (180-239)||(7977865-7977924)
chr6 (197-240)||(20371144-20371187)
chr6 (292-322)||(34073276-34073306)
chr6 (180-283)||(34073337-34073441)
chr6 (187-240)||(426548-426601)
chr6 (279-320)||(2117134-2117175)
chr6 (199-240)||(7265627-7265668)
chr6 (188-240)||(8777007-8777059)
chr6 (180-240)||(34595099-34595159)
[»] chr8 (12 HSPs)
chr8 (187-288)||(22651948-22652050)
chr8 (182-288)||(29510289-29510396)
chr8 (165-233)||(25192388-25192456)
chr8 (174-240)||(926822-926888)
chr8 (187-240)||(27213519-27213572)
chr8 (165-233)||(126390-126457)
chr8 (165-240)||(13436998-13437073)
chr8 (197-240)||(31109552-31109595)
chr8 (178-240)||(24362236-24362298)
chr8 (211-240)||(39954313-39954342)
chr8 (200-240)||(31236611-31236651)
chr8 (217-273)||(37283812-37283867)
[»] chr2 (20 HSPs)
chr2 (165-276)||(21782817-21782927)
chr2 (165-229)||(33519736-33519800)
chr2 (165-240)||(20539708-20539783)
chr2 (180-271)||(4332891-4332981)
chr2 (213-271)||(1327976-1328033)
chr2 (190-240)||(21616737-21616787)
chr2 (165-238)||(19536434-19536507)
chr2 (164-237)||(23717976-23718048)
chr2 (164-237)||(24105648-24105720)
chr2 (215-288)||(44860320-44860394)
chr2 (273-320)||(19536361-19536408)
chr2 (273-320)||(19574031-19574078)
chr2 (273-319)||(18255945-18255991)
chr2 (273-319)||(34691770-34691816)
chr2 (273-319)||(34714182-34714228)
chr2 (190-288)||(36409614-36409711)
chr2 (212-265)||(18276518-18276570)
chr2 (166-231)||(21624217-21624282)
chr2 (212-240)||(37411278-37411306)
chr2 (284-320)||(42511322-42511358)
[»] scaffold0306 (1 HSPs)
scaffold0306 (164-240)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (165-320)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (164-240)||(21902-21978)
[»] chr1 (23 HSPs)
chr1 (188-240)||(6427323-6427375)
chr1 (180-240)||(40917716-40917776)
chr1 (181-240)||(398799-398858)
chr1 (267-320)||(48547938-48547991)
chr1 (188-240)||(2896155-2896207)
chr1 (173-319)||(10572535-10572690)
chr1 (164-239)||(5376535-5376609)
chr1 (165-240)||(5927374-5927449)
chr1 (165-240)||(31014993-31015068)
chr1 (219-322)||(44482234-44482343)
chr1 (196-240)||(12443494-12443538)
chr1 (204-240)||(17831565-17831601)
chr1 (204-240)||(36878450-36878486)
chr1 (187-279)||(1486703-1486796)
chr1 (180-280)||(38503285-38503386)
chr1 (178-233)||(48040503-48040558)
chr1 (187-265)||(1262856-1262933)
chr1 (190-240)||(9709795-9709845)
chr1 (190-240)||(34298411-34298461)
chr1 (165-239)||(39130802-39130876)
chr1 (204-240)||(19562655-19562691)
chr1 (211-288)||(25361882-25361960)
chr1 (211-239)||(41877505-41877533)
[»] chr3 (20 HSPs)
chr3 (165-240)||(8383207-8383282)
chr3 (178-277)||(5441029-5441128)
chr3 (201-290)||(8039818-8039908)
chr3 (180-239)||(24205076-24205135)
chr3 (165-231)||(8842280-8842346)
chr3 (196-261)||(5407261-5407325)
chr3 (180-240)||(28917966-28918026)
chr3 (180-239)||(4991002-4991061)
chr3 (174-233)||(10335327-10335386)
chr3 (165-288)||(25064859-25064981)
chr3 (165-240)||(55401025-55401100)
chr3 (284-322)||(4466538-4466576)
chr3 (292-322)||(5440965-5440995)
chr3 (189-239)||(9800014-9800064)
chr3 (284-322)||(13807237-13807275)
chr3 (166-240)||(32429414-32429488)
chr3 (188-240)||(2620087-2620139)
chr3 (180-240)||(15796328-15796388)
chr3 (188-240)||(26492239-26492291)
chr3 (284-320)||(27505334-27505370)
[»] scaffold0168 (3 HSPs)
scaffold0168 (174-320)||(21002-21149)
scaffold0168 (259-320)||(21217-21278)
scaffold0168 (259-320)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (180-240)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (180-239)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (180-288)||(241559-241668)
[»] scaffold0004 (1 HSPs)
scaffold0004 (198-239)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (205-290)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (168-240)||(178853-178925)
scaffold0018 (198-239)||(192284-192325)
[»] chr4 (8 HSPs)
chr4 (180-240)||(23293020-23293080)
chr4 (204-239)||(35723420-35723455)
chr4 (204-238)||(17345451-17345485)
chr4 (217-288)||(30982863-30982935)
chr4 (182-239)||(847918-847975)
chr4 (187-240)||(36635296-36635349)
chr4 (276-320)||(18844423-18844467)
chr4 (284-320)||(28470448-28470484)
[»] scaffold0652 (1 HSPs)
scaffold0652 (180-240)||(496-556)
[»] scaffold0450 (1 HSPs)
scaffold0450 (292-320)||(8564-8592)
[»] scaffold0027 (1 HSPs)
scaffold0027 (274-322)||(46731-46778)


Alignment Details
Target: chr5 (Bit Score: 264; Significance: 1e-147; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 30 - 339
Target Start/End: Complemental strand, 38816932 - 38816630
Alignment:
Q  30 caacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgcttgaattgaagcaataat 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38816932 caacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgtttgaattgaagcaataat 38816833  T
Q  130 ttgagaaaatagaataattgaacggtaaccatatactatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataat 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||||||||||    
T  38816832 ttgagaaaatagaataattgaacggtaaccatatactatgaagcactaatacggactcc-------gcacggatactgacacgccgacaccgctaataat 38816740  T
Q  230 ttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagttatattcg 329  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38816739 ttgagaaaatcgctatatttcagtataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgattcatagttatattcg 38816640  T
Q  330 tgaatcgtga 339  Q
    ||||||||||    
T  38816639 tgaatcgtga 38816630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 19820503 - 19820428
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||||||| |||||||| ||||||||| |||||| |||||| | ||||||||||||||||||||||||||||    
T  19820503 ctatgaagcacggatacggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaatc 19820428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 320
Target Start/End: Complemental strand, 22423895 - 22423764
Alignment:
Q  191 acacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtc-ggac 287  Q
    ||||| ||||||||||||| | | |||||  ||||||||||||||||||| | ||| |||| ||||||  ||| ||||||||| ||||||||||| ||||    
T  22423895 acacgacacggatactgacaccctgacactactaataatttgagaaaatcac-ataattcaatataattatatatgtcggtgtcgtgtcggtgtctggac 22423797  T
Q  288 atggctaattcgaggagtgtccgtgcttcatag 320  Q
    | | ||||| |||||||||||||||||||||||    
T  22423796 acgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 22013364 - 22013431
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttg 232  Q
    |||||||||||| |||||||| ||||||||| |||||| |||||| ||||||||| ||||||||||||    
T  22013364 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttg 22013431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 42469171 - 42469245
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||||||||||| | |||||| ||| ||||| |||||||| |||| ||||||||| | |||||||||||||||||    
T  42469171 ctatgaagcacggacacggacaccgaacacgacacggataatgacacgccgacacggataataatttgagaaaat 42469245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 8420075 - 8420124
Alignment:
Q  273 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 322  Q
    |||||||||||||||  | |||||||||||||| ||||||||||||||||    
T  8420075 gtgtcggtgtcggacgcgcctaattcgaggagtatccgtgcttcatagtt 8420124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 15410532 - 15410483
Alignment:
Q  190 gacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||||| |||||| |||||| ||||||||||||||||||||| |||||||    
T  15410532 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaat 15410483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 6326384 - 6326332
Alignment:
Q  187 ccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    ||||||||| |||||| |||||| |||||||| ||||| ||||||||||||||    
T  6326384 ccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaat 6326332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 9929668 - 9929720
Alignment:
Q  268 gtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
    |||| |||||||| ||||||| | ||||||||||||||||| |||||||||||    
T  9929668 gtgtcgtgtcggtatcggacacgactaattcgaggagtgtctgtgcttcatag 9929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 3966500 - 3966577
Alignment:
Q  212 gccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 288  Q
    ||||||||||||||||||||||||||||| | | | |||| | ||||  ||||||||||||| ||||| ||||||||||    
T  3966500 gccgacaccgctaataatttgagaaaatcac-acaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggaca 3966577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 15382442 - 15382500
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaa 238  Q
    |||||| ||||||||| |||||| | |||| ||||||||| ||||||||||||| ||||    
T  15382442 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 322
Target Start/End: Complemental strand, 24906280 - 24906250
Alignment:
Q  292 ctaattcgaggagtgtccgtgcttcatagtt 322  Q
    |||||||||||||||||||||||||||||||    
T  24906280 ctaattcgaggagtgtccgtgcttcatagtt 24906250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 6035472 - 6035505
Alignment:
Q  204 actgacgcgccgacaccgctaataatttgagaaa 237  Q
    |||||| |||||||||||||||||||||||||||    
T  6035472 actgacacgccgacaccgctaataatttgagaaa 6035505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 21191143 - 21191090
Alignment:
Q  187 ccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||||| |||||| ||||||  |||||||| ||||||||||||| ||||||    
T  21191143 ccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatc 21191090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 32767004 - 32766975
Alignment:
Q  213 ccgacaccgctaataatttgagaaaatcgc 242  Q
    ||||||||||||||||||||||||||||||    
T  32767004 ccgacaccgctaataatttgagaaaatcgc 32766975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 17123037 - 17123073
Alignment:
Q  204 actgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| |||| |||||||||||||||||||||||||    
T  17123037 actgacacgccaacaccgctaataatttgagaaaatc 17123073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 21522722 - 21522766
Alignment:
Q  187 ccggacacggcacggatactgacgcgccgacaccgctaataattt 231  Q
    ||||||||| |||||| |||||| ||||||||| |||||||||||    
T  21522722 ccggacacgacacggacactgacacgccgacacagctaataattt 21522766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 21533288 - 21533332
Alignment:
Q  187 ccggacacggcacggatactgacgcgccgacaccgctaataattt 231  Q
    ||||||||| |||||| |||||| ||||||||| |||||||||||    
T  21533288 ccggacacgacacggacactgacacgccgacacagctaataattt 21533332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 27144452 - 27144488
Alignment:
Q  204 actgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| |||||||||||||||||||||||| |||||    
T  27144452 actgacacgccgacaccgctaataatttgaggaaatc 27144488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 239
Target Start/End: Original strand, 27932231 - 27932259
Alignment:
Q  211 cgccgacaccgctaataatttgagaaaat 239  Q
    |||||||||||||||||||||||||||||    
T  27932231 cgccgacaccgctaataatttgagaaaat 27932259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 27944991 - 27945065
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||||||||||| |||||||| ||||||||| |||||| |||||| |||||||||| ||||||||||||||||||    
T  27944991 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaat 27945065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 290
Target Start/End: Complemental strand, 29787432 - 29787354
Alignment:
Q  211 cgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatg 290  Q
    |||||||||||||||||||||||||||||| | ||| |||| | ||||||||||| |||||  ||||||||| |||||||    
T  29787432 cgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattatgtgttggtgtaatgtcggtgttggacatg 29787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 24105629 - 24105702
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||||||||||| ||||||| | |||||||| |||||| |||||| ||||||||| ||||||||||||| |||||    
T  24105629 ctatgaagcacggatacgga-tacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 24105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 11722185 - 11722132
Alignment:
Q  187 ccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||||| |||||| |||||| ||||||||||||||| ||||||||||||||    
T  11722185 ccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatc 11722132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 288
Target Start/End: Original strand, 24339605 - 24339716
Alignment:
Q  178 atacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtg 275  Q
    |||||||| ||||||||| || ||| | |||| ||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| |||    
T  24339605 atacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtg 24339703  T
Q  276 tcggtgtcggaca 288  Q
    |||||||||||||    
T  24339704 tcggtgtcggaca 24339716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 320
Target Start/End: Original strand, 11700803 - 11700909
Alignment:
Q  215 gacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcgg--acatggctaattcgaggagtgtccgtg 312  Q
    ||||||| ||||||||||| |||||| | ||| |||| | |||||||||||| |||| || ||||||||||  ||| ||||||| |||||||||||| ||    
T  11700803 gacaccgttaataatttgacaaaatcac-ataattcaatgtaattatgtgtctgtgttgtctcggtgtcggacacacggctaatccgaggagtgtccctg 11700901  T
Q  313 cttcatag 320  Q
     |||||||    
T  11700902 attcatag 11700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 19206025 - 19206107
Alignment:
Q  190 gacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 271  Q
    |||||| |||||| ||  || |||||||||||||||||||||||||||||| | ||| |||||||||||  |||||||||||||    
T  19206025 gacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcac-ataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 32308109 - 32308194
Alignment:
Q  204 actgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 288  Q
    |||||| |||||||||||||||||||||||||||||| | ||| |||| | ||||  |||||||| |||| |||||||||| |||||    
T  32308109 actgacacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggaca 32308194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 1433419 - 1433479
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||| ||||| |||||| | |||| ||||||||||| ||||||||||||||||||    
T  1433419 acggacaccgaacacgacacggacattgacacgccgacaccgttaataatttgagaaaatc 1433479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 320
Target Start/End: Complemental strand, 7328805 - 7328639
Alignment:
Q  160 atatactatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataat- 258  Q
    ||||||||||||||||| |||||||| ||| ||||| ||| || | | || || ||| || |||||||||||||||||||  | ||| || | | ||||     
T  7328805 atatactatgaagcacggatacggacaccgaacacgacacagacattaacacgtcgatactgctaataatttgagaaaataac-ataatttagtgtaatt 7328707  T
Q  259 -tatgtgtcggtgtggtgtc-----ggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
     ||||||||||||| |||||     ||||||||||| | ||||| ||| |||||| ||||||||||||    
T  7328706 atatgtgtcggtgtcgtgtcgtgttggtgtcggacacgcctaatccgatgagtgttcgtgcttcatag 7328639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 30731033 - 30731104
Alignment:
Q  211 cgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtc 283  Q
    |||||||||||| ||||||||||||||||| | ||| |||| | ||||| ||||||||||| |||| ||||||    
T  30731033 cgccgacaccgcgaataatttgagaaaatcac-ataattcagtgtaattgtgtgtcggtgtcgtgttggtgtc 30731104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 2034392 - 2034462
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaa 236  Q
    |||||||||||| ||||||| | | |||||| |||||||||| || || ||||||| |||||||||||||||    
T  2034392 ctatgaagcacggatacgga-tactgacacgacacggatacttacacgtcgacaccactaataatttgagaa 2034462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 2425818 - 2425767
Alignment:
Q  189 ggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||| ||| ||||||||| ||||| ||||| ||||||||||||||||||    
T  2425818 ggacacgacacagatactgacacgccggcaccgttaataatttgagaaaatc 2425767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 43027578 - 43027503
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||||||| || ||||| | ||||||| |||||| |||||| || |||| | ||||||||||||| ||||||    
T  43027578 ctatgaagcacggatgcggacactggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatc 43027503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 43249958 - 43250017
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||||| ||||||| | |||||| |||||| ||||||||| | |||||||||||||||||    
T  43249958 acggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaat 43250017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 8046103 - 8046061
Alignment:
Q  198 acggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||||||| |||| ||||| |||||||||||||||||||    
T  8046103 acggatactgacacgccaacaccactaataatttgagaaaatc 8046061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 288
Target Start/End: Original strand, 9933282 - 9933347
Alignment:
Q  222 ctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 288  Q
    |||||||||||| |||||| | |||||||| || | ||||||||| |||| ||||||||||||||||    
T  9933282 ctaataatttgaaaaaatcac-atatttcagtaaacttatgtgtcagtgtcgtgtcggtgtcggaca 9933347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 22484014 - 22484082
Alignment:
Q  204 actgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 271  Q
    |||||| ||||||||||||||||||||| ||||||| || ||| |||| ||||||  |||||||||||||    
T  22484014 actgacacgccgacaccgctaataattttagaaaattgc-ataattcagtataattatatgtgtcggtgt 22484082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 240
Target Start/End: Original strand, 23191879 - 23191921
Alignment:
Q  198 acggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||| |||||  ||||||||||||||||||||||||||||||    
T  23191879 acggacactgatacgccgacaccgctaataatttgagaaaatc 23191921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 26733279 - 26733329
Alignment:
Q  190 gacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| |||||| |||||| || |||||||||||||||||||| ||||||    
T  26733279 gacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatc 26733329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 11072294 - 11072362
Alignment:
Q  211 cgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggt 280  Q
    ||||||||||| ||||||||||| ||||    |||| |||| ||||||||||||||||||| ||||||||    
T  11072294 cgccgacaccgataataatttgaaaaaaata-tataattcaatataattatgtgtcggtgtcgtgtcggt 11072362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 321
Target Start/End: Original strand, 17852091 - 17852120
Alignment:
Q  292 ctaattcgaggagtgtccgtgcttcatagt 321  Q
    ||||||||||||||||||||||||||||||    
T  17852091 ctaattcgaggagtgtccgtgcttcatagt 17852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 49107795 - 49107844
Alignment:
Q  189 ggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaa 238  Q
    ||||||| ||||||  ||||| | ||||||||||||||||||||||||||    
T  49107795 ggacacgacacggactctgacacaccgacaccgctaataatttgagaaaa 49107844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 15680900 - 15680928
Alignment:
Q  292 ctaattcgaggagtgtccgtgcttcatag 320  Q
    |||||||||||||||||||||||||||||    
T  15680900 ctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 20549780 - 20549816
Alignment:
Q  204 actgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| | ||||||||||||||||||||||||||||    
T  20549780 actgacacaccgacaccgctaataatttgagaaaatc 20549816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 239
Target Start/End: Original strand, 28155566 - 28155594
Alignment:
Q  211 cgccgacaccgctaataatttgagaaaat 239  Q
    |||||||||||||||||||||||||||||    
T  28155566 cgccgacaccgctaataatttgagaaaat 28155594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 187 - 288
Target Start/End: Original strand, 10294079 - 10294181
Alignment:
Q  187 ccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 284  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||||||| |||||| |||||||| | ||||  ||||||||||||| |||| |||||||    
T  10294079 ccggacacgacacggatactgacatgccgataccgctaataatttgagataatcgc-atatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcg 10294177  T
Q  285 gaca 288  Q
    ||||    
T  10294178 gaca 10294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 9027143 - 9027203
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| ||||    
T  9027143 acggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatc 9027203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 853968 - 853893
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||| |||| |||||||| ||||||||| ||||||| ||||| |||||||||  |||||||||||| ||||||    
T  853968 ctatgaatcacggatacggacaccggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatc 853893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 288
Target Start/End: Original strand, 16766662 - 16766771
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 277  Q
    |||||| ||||||||| || ||| |||||| ||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| |||||    
T  16766662 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtgtc 16766760  T
Q  278 ggtgtcggaca 288  Q
    |||||||||||    
T  16766761 ggtgtcggaca 16766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 5000720 - 5000660
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||||||| | ||||||||||||| || ||||||||||||||||| |||||||||    
T  5000720 acggacaccggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatc 5000660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 320
Target Start/End: Complemental strand, 5732604 - 5732474
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcgg 279  Q
    |||||| | ||||||| || ||| |||||| ||||||||||| |||||||||||||||||| | |||||| | | ||||||| |         |||||||    
T  5732604 acggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcac-atattttagtgtaattatat---------gtgtcgg 5732515  T
Q  280 tgtcggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
    ||||||||| | ||||| |||||||||||| ||||||||||    
T  5732514 tgtcggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 8365628 - 8365560
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttga 233  Q
    |||||||||||| |||||||| || |||||| |||||| |||||| |||||||||  ||||||||||||    
T  8365628 ctatgaagcacggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttga 8365560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 320
Target Start/End: Complemental strand, 8805625 - 8805524
Alignment:
Q  221 gctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggt---gtcggacatggctaattcgaggagtgtccgtgcttca 317  Q
    |||||||||||||||||||| | ||| || | | ||||||||||||||||| ||||| |    || ||||||| ||||| ||||||||||||||||||||    
T  8805625 gctaataatttgagaaaatcac-ataatttagtgtaattatgtgtcggtgtagtgtcagacacgtgggacatgcctaatccgaggagtgtccgtgcttca 8805527  T
Q  318 tag 320  Q
    |||    
T  8805526 tag 8805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 12696277 - 12696348
Alignment:
Q  167 atgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||||||||| |||||||| | ||||||| |||||| |||||| ||||||||| ||||||||||||| |||||    
T  12696277 atgaagcacggatacggacac-ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 12696348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 288
Target Start/End: Complemental strand, 9107464 - 9107355
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 277  Q
    |||||| ||||||||| |||||| ||| || ||||||||| ||||||||||||| |||||| | | | |||| | |||||  | |||||||||| |||||    
T  9107464 acggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtgtaattacaagtgtcggtgtcgtgtc 9107366  T
Q  278 ggtgtcggaca 288  Q
    |||||||||||    
T  9107365 ggtgtcggaca 9107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 9629357 - 9629408
Alignment:
Q  189 ggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||| |||||||| |||| |||||||||||| |||||||||||||||||    
T  9629357 ggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatc 9629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 30866253 - 30866178
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||| |||||||||||| ||||||| | ||| || || ||| | || |||||||||||||||||||||||||    
T  30866253 ctatgaagtacgaatacggacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatc 30866178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 6389693 - 6389767
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||||||||||| | || ||| ||||||||| |||||| ||| || ||||||||| | |||||||||||||||||    
T  6389693 ctatgaagcacggacacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaat 6389767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 9658854 - 9658904
Alignment:
Q  190 gacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| |||||| |||||| ||||||||||||||||||||| ||||||||    
T  9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatc 9658904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 19040339 - 19040377
Alignment:
Q  202 atactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  19040339 atactgacacgccgacaccgctaataatttgagaaaatc 19040377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 3398569 - 3398637
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttga 233  Q
    |||||||||| | ||||||||  || ||||| |||||| |||||| ||||||||| |||||||||||||    
T  3398569 ctatgaagcatggatacggacatcgaacacgacacggacactgacacgccgacacagctaataatttga 3398637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 7938081 - 7938141
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||||||||| || ||| |||||| ||||||||| ||||||||||||| ||||||    
T  7938081 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatc 7938141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 13851712 - 13851760
Alignment:
Q  191 acacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    ||||| |||||| |||||| || ||||||||||||||||||||||||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaat 13851760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 426525 - 426478
Alignment:
Q  273 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||||    
T  426525 gtgtcggtgtcggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 7977924 - 7977865
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||||| | ||||||| || |||||||||| ||||||||| ||||||||||||| |||||    
T  7977924 acggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaat 7977865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 20371187 - 20371144
Alignment:
Q  197 cacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| | |||| ||||||||||||||||||||||||||||||    
T  20371187 cacggacattgacacgccgacaccgctaataatttgagaaaatc 20371144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 322
Target Start/End: Complemental strand, 34073306 - 34073276
Alignment:
Q  292 ctaattcgaggagtgtccgtgcttcatagtt 322  Q
    |||||||||||||||||||||||||||||||    
T  34073306 ctaattcgaggagtgtccgtgcttcatagtt 34073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 34073441 - 34073337
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 277  Q
    |||||| | ||||||| |||||| ||||||  ||| ||| ||||||||||||||||||||| | ||| |||| | ||||  |||| |||||||| |||||    
T  34073441 acggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctc-ataattcagtgtaattatatgggtcggtgtcgtgtc 34073343  T
Q  278 ggtgtc 283  Q
    ||||||    
T  34073342 ggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 426601 - 426548
Alignment:
Q  187 ccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||||| |||||| |||||| ||||||||| | ||||||||||| ||||||    
T  426601 ccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatc 426548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 2117134 - 2117175
Alignment:
Q  279 gtgtcggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
    |||||||||||| |||||  ||||||||||||||||||||||    
T  2117134 gtgtcggacatgcctaatcggaggagtgtccgtgcttcatag 2117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 7265668 - 7265627
Alignment:
Q  199 cggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||| |||||| |||| |||||||||||||||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatc 7265627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 8777059 - 8777007
Alignment:
Q  188 cggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||| |||||| |||||| |||||||||  |||||||||||| ||||||    
T  8777059 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 8777007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 34595099 - 34595159
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||||||||| |||||| | |||| |||||||||  |||||||||||| ||||||    
T  34595099 acggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatc 34595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 288
Target Start/End: Original strand, 22651948 - 22652050
Alignment:
Q  187 ccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcg 284  Q
    ||||||||| |||||| |||||| ||||||||| ||||||||||||| |||||| | ||| |||| |||||||  | |||||||||| ||||||||||||    
T  22651948 ccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcaatataattacaagtgtcggtgtcgtgtcggtgtcg 22652046  T
Q  285 gaca 288  Q
    ||||    
T  22652047 gaca 22652050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 29510396 - 29510289
Alignment:
Q  182 ggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcgg 279  Q
    |||| ||||||||| |||||| |||||| ||||||||| ||||||||||||| |||||| | | | |||| |||||||  | |||||||||| |||||||    
T  29510396 ggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtataattacaagtgtcggtgtagtgtcgg 29510298  T
Q  280 tgtcggaca 288  Q
    |||||||||    
T  29510297 tgtcggaca 29510289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 25192456 - 25192388
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttga 233  Q
    |||||||||||||||||||||  ||||||||  ||||| |||||| ||||||||| |||||||||||||    
T  25192456 ctatgaagcacgaatacggacatcggacacgatacggacactgacacgccgacacagctaataatttga 25192388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 926888 - 926822
Alignment:
Q  174 acgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||| |||||| ||||||||| |||||| |||||| |||| ||||  |||||||||||||||||||    
T  926888 acgaacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatc 926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 27213519 - 27213572
Alignment:
Q  187 ccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||||| ||||||||| ||| ||||||||| ||||||||||| ||||||||    
T  27213519 ccggacacgacacggatacagacacgccgacactgctaataatttcagaaaatc 27213572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 126457 - 126390
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttga 233  Q
    |||||||||||| ||||| || | |||||||  |||||||||||| |||| ||||||||||||||||||    
T  126457 ctatgaagcacggatacgcacac-ggacacgatacggatactgacacgccaacaccgctaataatttga 126390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 13437073 - 13436998
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||||||| | | |||| ||||||| | || ||| |||||| ||||||||| ||||||||||||| ||||||    
T  13437073 ctatgaagcacggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatc 13436998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 31109595 - 31109552
Alignment:
Q  197 cacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||    
T  31109595 cacggacactgacacgccgacaccgttaataatttgagaaaatc 31109552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 24362298 - 24362236
Alignment:
Q  178 atacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||| ||||| ||| ||| || || ||| ||||||||||||||||||||||||| ||||    
T  24362298 atacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatc 24362236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 240
Target Start/End: Complemental strand, 39954342 - 39954313
Alignment:
Q  211 cgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||||||||||||||||||||||||||    
T  39954342 cgccgacaccgctaataatttgagaaaatc 39954313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 31236651 - 31236611
Alignment:
Q  200 ggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||| ||||||||| ||||||||||||||||||||    
T  31236651 ggatacggacacgccgacactgctaataatttgagaaaatc 31236611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 37283867 - 37283812
Alignment:
Q  217 caccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtgg 273  Q
    ||||||||||||| |||||||||| | ||| |||| | |||||||||||||||||||    
T  37283867 caccgctaataatctgagaaaatcac-ataattcagtgtaattatgtgtcggtgtgg 37283812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 21782927 - 21782817
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtg 264  Q
    ||||||||||||||||| ||| | ||||||| |||  | |||||| ||||||||| |||||||||||||||||||| | ||| |||| | ||||||||||    
T  21782927 ctatgaagcacgaatacagacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcac-ataattcagtgtaattatgtg 21782829  T
Q  265 tcggtgtggtgt 276  Q
     |||||| ||||    
T  21782828 ccggtgtcgtgt 21782817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 33519736 - 33519800
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataat 229  Q
    |||||||||||| |||||||| ||||||||| | ||||||||||| | |||||||||||||||||    
T  33519736 ctatgaagcacggatacggacaccggacacgacgcggatactgacacaccgacaccgctaataat 33519800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 20539783 - 20539708
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||||||| |||||||| | ||||||| |||||| |||||| || |||||| ||||||||||||| ||||||    
T  20539783 ctatgaagcacggatacggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatc 20539708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 271
Target Start/End: Original strand, 4332891 - 4332981
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 271  Q
    |||||| ||||||||||||| |||||| ||  |||||||| | |||||||||| ||||||| | ||| |||| | |||||||||||||||||    
T  4332891 acggacaccggacacggcacagatacttacatgccgacactgataataatttgggaaaatcac-ataattcaatgtaattatgtgtcggtgt 4332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 1327976 - 1328033
Alignment:
Q  213 ccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 271  Q
    ||||||||||||||||||||||||||||  || | |||| |||||||||||||||||||    
T  1327976 ccgacaccgctaataatttgagaaaatc-ataaaattcagtataattatgtgtcggtgt 1328033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 21616737 - 21616787
Alignment:
Q  190 gacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| |||||| || ||| ||||||||||||||||||||||||||||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatc 21616787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 19536507 - 19536434
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaa 238  Q
    |||||||||||  |||||||| ||||||||| |||||| | |||| |||||||||  |||||||||||| ||||    
T  19536507 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaa 19536434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 23717976 - 23718048
Alignment:
Q  164 actatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaa 237  Q
    ||||||||||||| |||| ||| | ||||| | |||||| |||||| | |||||||||||||||||||||||||    
T  23717976 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 23718048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 24105648 - 24105720
Alignment:
Q  164 actatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaa 237  Q
    ||||||||||||| |||| ||| | ||||| | |||||| |||||| | |||||||||||||||||||||||||    
T  24105648 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 24105720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 44860320 - 44860394
Alignment:
Q  215 gacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 288  Q
    |||||||||||||||||||||||||||| ||| |||| | ||||  ||||||||||||| |||| ||||| |||||    
T  44860320 gacaccgctaataatttgagaaaatcgc-ataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggaca 44860394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 19536408 - 19536361
Alignment:
Q  273 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||||||    
T  19536408 gtgtcggtgtcggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 19574031 - 19574078
Alignment:
Q  273 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
    ||||||||||||||||   |||||||||||||||||| ||||||||||    
T  19574031 gtgtcggtgtcggacacacctaattcgaggagtgtccatgcttcatag 19574078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 18255991 - 18255945
Alignment:
Q  273 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 319  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||    
T  18255991 gtgtcggtgtcggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 34691816 - 34691770
Alignment:
Q  273 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 319  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34691816 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34691770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 34714228 - 34714182
Alignment:
Q  273 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 319  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34714228 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34714182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 36409711 - 36409614
Alignment:
Q  190 gacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 288  Q
    |||||| |||||||||| ||  |||||||||||| ||||||||| |||||| | ||| || | | |||||||||||||||||  ||| |||||| ||||    
T  36409711 gacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcac-ataatttagtgtaattatgtgtcggtgtcatgttggtgtctgaca 36409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 18276518 - 18276570
Alignment:
Q  212 gccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 265  Q
    ||||||||||||||||||||||||||||| || || |||| | |||||||||||    
T  18276518 gccgacaccgctaataatttgagaaaatcact-taattcagtgtaattatgtgt 18276570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 21624217 - 21624282
Alignment:
Q  166 tatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataattt 231  Q
    |||||||| || |||||||| ||| ||||| ||| || |||||| ||||||||| |||||||||||    
T  21624217 tatgaagcccggatacggacaccgaacacgacacagacactgacacgccgacacagctaataattt 21624282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 240
Target Start/End: Complemental strand, 37411306 - 37411278
Alignment:
Q  212 gccgacaccgctaataatttgagaaaatc 240  Q
    |||||||||||||||||||||||||||||    
T  37411306 gccgacaccgctaataatttgagaaaatc 37411278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 42511358 - 42511322
Alignment:
Q  284 ggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  42511358 ggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 13349 - 13425
Alignment:
Q  164 actatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||||||||| |||||||| ||||| | | |||||| |||||| |||||||||  |||||||||||||||||||    
T  13349 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 13425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 320
Target Start/End: Original strand, 20122 - 20279
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atg 262  Q
    |||||||||||  |||||||| ||||||||| |||||| | |||| ||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |    
T  20122 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaag 20220  T
Q  263 tgtcggtgtggtgtcggtgtcggacatggctaattcgaggagt---gtccgtgcttcatag 320  Q
    |||| |||| |||||||||  ||||| | ||||| ||||||||   |||||||||||||||    
T  20221 tgtcagtgtcgtgtcggtg--ggacacgcctaatccgaggagtacagtccgtgcttcatag 20279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 21978 - 21902
Alignment:
Q  164 actatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||||||||| |||||||| ||||| | | |||||| |||||| |||||||||  |||||||||||||||||||    
T  21978 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 21902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 6427323 - 6427375
Alignment:
Q  188 cggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||||||||    
T  6427323 cggacacggcacggacactgacacgccaacaccgctaataatttgagaaaatc 6427375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 40917716 - 40917776
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||    
T  40917716 acggacaccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaatc 40917776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 398858 - 398799
Alignment:
Q  181 cggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||| ||||||||| |||||| |||||| ||||||||||||||||||||||| ||||||    
T  398858 cggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatc 398799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 48547991 - 48547938
Alignment:
Q  267 ggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
    ||||| |||||||||||||| | | |||||||||||||||||||||||||||||    
T  48547991 ggtgtcgtgtcggtgtcggatacgcctaattcgaggagtgtccgtgcttcatag 48547938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 2896207 - 2896155
Alignment:
Q  188 cggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||  |||||| |||||| ||||||||||||||||||||||||||||||    
T  2896207 cggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatc 2896155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 319
Target Start/End: Complemental strand, 10572690 - 10572535
Alignment:
Q  173 cacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtg 270  Q
    |||| |||||||| ||||||||| || | | |||||| |||||||||| ||||||||||||||||||| | ||| |||  | |||||  |||||||||||    
T  10572690 cacggatacggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcac-ataattcggtgtaattaaatgtgtcggtg 10572592  T
Q  271 tggtgtcggtgtc--------ggacatggctaattcgaggagtgtccgtgcttcata 319  Q
    | |||| ||||||        ||||| | ||||||| ||||||||||||||||||||    
T  10572591 ttgtgttggtgtcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 5376609 - 5376535
Alignment:
Q  164 actatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    ||||||| ||||| |||| || |||||||||| |||||| ||| || ||||||||||||||||||||| |||||||    
T  5376609 actatgaggcacgtatacaga-tccggacacgacacggacactaacacgccgacaccgctaataatttaagaaaat 5376535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 5927449 - 5927374
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||| ||||||| |||||||| ||||||||| |||||| |||||| |||  |||| ||||||||||||| ||||||    
T  5927449 ctattaagcacggatacggacaccggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatc 5927374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 31014993 - 31015068
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||||||| | || ||| |||| |||| |||||  ||||||||||| |||| ||||||||||||||||||||    
T  31014993 ctatgaagcacggacacagacaccgggcacgacacgggcactgacgcgcctacacagctaataatttgagaaaatc 31015068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 44482234 - 44482343
Alignment:
Q  219 ccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg-----gctaattcgaggagtgtccgt 311  Q
    ||||| |||||||||||||||| | ||| |||| | |||||||  |||||||||| |||||||||||||||| |     |||||| ||||||||||||||    
T  44482234 ccgcttataatttgagaaaatcac-ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacagctaatccgaggagtgtccgt 44482332  T
Q  312 gcttcatagtt 322  Q
    ||| |||||||    
T  44482333 gctccatagtt 44482343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 12443538 - 12443494
Alignment:
Q  196 gcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||||    
T  12443538 gcacggatacggacacgccgacacagctaataatttgagaaaatc 12443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 17831601 - 17831565
Alignment:
Q  204 actgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||||||||||||||||||||||||||||||    
T  17831601 actgacacgccgacaccgctaataatttgagaaaatc 17831565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 36878450 - 36878486
Alignment:
Q  204 actgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||||||||||||||||||||||||||||||    
T  36878450 actgacacgccgacaccgctaataatttgagaaaatc 36878486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 279
Target Start/End: Complemental strand, 1486796 - 1486703
Alignment:
Q  187 ccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcgg 279  Q
    ||||| ||| ||||||||||||| ||| ||||| ||||||||||||| |||||| | ||| |||| | |||||||  |||||||||| |||||||    
T  1486796 ccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcac-ataattcagtgtaattataagtgtcggtgtcgtgtcgg 1486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 38503285 - 38503386
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 277  Q
    |||||| | ||||| | |||||| ||| || | ||||||||||||||||||||||||||||  ||||||||| | ||||  |||||||||||||  ||||    
T  38503285 acggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatc-atatatttcagtgtaattatatgtgtcggtgtcctgtc 38503383  T
Q  278 ggt 280  Q
    |||    
T  38503384 ggt 38503386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 48040558 - 48040503
Alignment:
Q  178 atacggactccggacacggcacggatactgacgcgccgacaccgctaataatttga 233  Q
    |||||||| ||||||||| |||||| |||||| ||||||||| | |||||||||||    
T  48040558 atacggacaccggacacgacacggacactgacacgccgacacagataataatttga 48040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 1262856 - 1262933
Alignment:
Q  187 ccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 265  Q
    ||||||||| |||| | || ||| ||||||||| |||||||||||||||||||| | ||| |||| |||||||| ||||    
T  1262856 ccggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcac-ataattcaatataattaagtgt 1262933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 9709795 - 9709845
Alignment:
Q  190 gacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| |||||| ||||||  ||| |||||||||||||||||||||||||    
T  9709795 gacacgacacggacactgacatgcctacaccgctaataatttgagaaaatc 9709845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 34298411 - 34298461
Alignment:
Q  190 gacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| |||||| |||||| | |||||||| |||||||||||||||||||    
T  34298411 gacacgacacggaaactgacacaccgacaccactaataatttgagaaaatc 34298461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 39130876 - 39130802
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||||||||||| |||||||| ||||||||| || ||||| |||| ||| |||||   ||||||||| |||||||    
T  39130876 ctatgaagcacggatacggacaccggacacgacatggatattgacacgctgacactattaataattttagaaaat 39130802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 19562691 - 19562655
Alignment:
Q  204 actgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  19562691 actgacacgccgacactgctaataatttgagaaaatc 19562655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 288
Target Start/End: Original strand, 25361882 - 25361960
Alignment:
Q  211 cgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 288  Q
    |||||||||| || |||||||||||||||| | ||| |||| | ||||  |||||||| |||| ||||||||||||||||    
T  25361882 cgccgacaccactgataatttgagaaaatcac-ataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggaca 25361960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 239
Target Start/End: Complemental strand, 41877533 - 41877505
Alignment:
Q  211 cgccgacaccgctaataatttgagaaaat 239  Q
    |||||||||||||||||||||||||||||    
T  41877533 cgccgacaccgctaataatttgagaaaat 41877505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 8383207 - 8383282
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||| |||||| | |||||| | ||||||| |||||| | |||| ||||||||||||||||||||||||||||||    
T  8383207 ctatgtagcacggacacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatc 8383282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 5441128 - 5441029
Alignment:
Q  178 atacggac-tccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgt 276  Q
    |||||||| |||||||||| ||| || |||||| ||||| ||||||||| |||||||||||||| | ||| |||| |  |||||||||||||||| ||||    
T  5441128 atacggacatccggacacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcac-ataattcaatggaattatgtgtcggtgttgtgt 5441030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 290
Target Start/End: Complemental strand, 8039908 - 8039818
Alignment:
Q  201 gatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggacatg 290  Q
    |||| |||| |||| ||||||||||||||||||||||||   |||| |||| | ||||  ||||||||||||| ||||||||||||||||||    
T  8039908 gatattgacacgccaacaccgctaataatttgagaaaat-tatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatg 8039818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 24205135 - 24205076
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||||| ||||||||| |||||| |||||| ||||||||| | |||||||||||||||||    
T  24205135 acggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaat 24205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 8842280 - 8842346
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataattt 231  Q
    |||||||||||| |||||||| ||||| ||| |||||| | ||||  ||||||||||||||||||||    
T  8842280 ctatgaagcacggatacggacaccggatacgacacggaaattgacatgccgacaccgctaataattt 8842346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 5407325 - 5407261
Alignment:
Q  196 gcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataattat 261  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||| | ||| |||||| |||||||    
T  5407325 gcacggataccgacacgccgacaccgctaaaaatttgagaaaatcac-ataattcattgtaattat 5407261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 28917966 - 28918026
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||||||||| |||||| |||||| ||||||||  ||||||||||||| ||||||    
T  28917966 acggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatc 28918026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 4991061 - 4991002
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||||| ||| ||||| |||||| |||||| | ||||||||||||||| |||||||||||    
T  4991061 acggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaat 4991002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 10335386 - 10335327
Alignment:
Q  174 acgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttga 233  Q
    ||||| |||||| ||||||||| |||||| |||||| |||||||||  ||||||||||||    
T  10335386 acgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttga 10335327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 288
Target Start/End: Original strand, 25064859 - 25064981
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtg 264  Q
    ||||||| ||||  ||| ||| ||||||||| ||| || | |||| |||||||||||||||| |||||| |||||| | ||| || | | ||||||||||    
T  25064859 ctatgaaacacgggtacagacaccggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcac-ataatttagtgtaattatgtg 25064957  T
Q  265 tcggtgtggtgtcggtgtcggaca 288  Q
    | ||| | |||| |||||||||||    
T  25064958 ttggtatcgtgttggtgtcggaca 25064981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 55401025 - 55401100
Alignment:
Q  165 ctatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||||||  |||||||| ||||| ||| |||||| |||||  |||||||||  |||||||||||| ||||||    
T  55401025 ctatgaagcacagatacggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatc 55401100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 4466576 - 4466538
Alignment:
Q  284 ggacatggctaattcgaggagtgtccgtgcttcatagtt 322  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  4466576 ggacacggcttattcgaggagtgtccgtgcttcatagtt 4466538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 322
Target Start/End: Complemental strand, 5440995 - 5440965
Alignment:
Q  292 ctaattcgaggagtgtccgtgcttcatagtt 322  Q
    |||||||||||||||||||||||||||||||    
T  5440995 ctaattcgaggagtgtccgtgcttcatagtt 5440965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 9800014 - 9800064
Alignment:
Q  189 ggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    ||||||| |||| | |||||| |||||||||| ||||||||||||||||||    
T  9800014 ggacacgacacgtacactgacacgccgacacctctaataatttgagaaaat 9800064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 13807237 - 13807275
Alignment:
Q  284 ggacatggctaattcgaggagtgtccgtgcttcatagtt 322  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  13807237 ggacatgcctaattcgaggagtgtccgtgtttcatagtt 13807275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 32429488 - 32429414
Alignment:
Q  166 tatgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||||||| |||||||| ||||||||  |||| | | |||| | |||||| |||||||||||| ||||||||    
T  32429488 tatgaagcacgtatacggacaccggacacaacacgaacattgacactccgacaacgctaataatttaagaaaatc 32429414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 2620139 - 2620087
Alignment:
Q  188 cggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||| | |||| |||||| |||||||||| ||||| |||||||||||||    
T  2620139 cggacacgactcggacactgacacgccgacaccactaatcatttgagaaaatc 2620087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 15796388 - 15796328
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||||||||| |||||| | |||| ||||||||| | ||||||||||| ||||||    
T  15796388 acggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatc 15796328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 26492291 - 26492239
Alignment:
Q  188 cggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||||| |||||| |||||| ||||||||  ||||||||||||| ||||||    
T  26492291 cggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatc 26492239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 27505334 - 27505370
Alignment:
Q  284 ggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  27505334 ggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 320
Target Start/End: Original strand, 21002 - 21149
Alignment:
Q  174 acgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgt 271  Q
    ||||| |||||| || |||||| |||||| ||||||  || ||||| | |||||||||||||||||| | |||  ||  |||||||||  |||||||| |    
T  21002 acgaacacggacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcac-ataagtcggtataattatatgtgtcggtat 21100  T
Q  272 ggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
     ||||||||||| |||| | ||||| |||| ||| ||||||||||||||    
T  21101 cgtgtcggtgtcagacacgcctaatccgagaagtatccgtgcttcatag 21149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 21217 - 21278
Alignment:
Q  259 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||||||| ||||||||||||||    
T  21217 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgaggagtatccgtgcttcatag 21278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 21346 - 21407
Alignment:
Q  259 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||| |||||| |||||||||||    
T  21346 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgagaagtgtctgtgcttcatag 21407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 8763 - 8823
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||||||||| |||||| |||||| ||||||||| ||||||||||||| ||||||    
T  8763 acggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatc 8823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 225362 - 225303
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||||| ||||||||| |||||| |||||| ||||||||| | |||||||||||||||||    
T  225362 acggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaat 225303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 288
Target Start/End: Original strand, 241559 - 241668
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtc 277  Q
    |||||| ||||||||| |||||| |||||| ||||||||| ||||||||||||  |||||| | ||| || | | |||||||  |||||||||| ||||     
T  241559 acggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcac-ataatttagtgtaattatgagtgtcggtgtcgtgtt 241657  T
Q  278 ggtgtcggaca 288  Q
    |||||||||||    
T  241658 ggtgtcggaca 241668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 92790 - 92831
Alignment:
Q  198 acggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    ||||| |||||| |||||||||||||||||||||||||||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaat 92831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 290
Target Start/End: Original strand, 53170 - 53256
Alignment:
Q  205 ctgacgcgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg 290  Q
    ||||| |||||| ||||| ||||||||||||||||| | ||| |||| | |||||||  |||||||||  ||||||||||||||||||    
T  53170 ctgacacgccgataccgccaataatttgagaaaatcac-ataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatg 53256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 178925 - 178853
Alignment:
Q  168 tgaagcacgaatacggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||||| |||  ||| ||||||||| |||||| |||||| |||||||||  |||||||||||| ||||||    
T  178925 tgaagcacggatattgacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 178853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 192325 - 192284
Alignment:
Q  198 acggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    ||||| |||||| ||||||||||| |||||||||||||||||    
T  192325 acggacactgacacgccgacaccgttaataatttgagaaaat 192284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 23293080 - 23293020
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||||||||| |||||| | |||| ||||||||| ||||||||||||| ||||||    
T  23293080 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatc 23293020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 35723455 - 35723420
Alignment:
Q  204 actgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||||| |||||||||||||||||||||||||||||    
T  35723455 actgacacgccgacaccgctaataatttgagaaaat 35723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 238
Target Start/End: Complemental strand, 17345485 - 17345451
Alignment:
Q  204 actgacgcgccgacaccgctaataatttgagaaaa 238  Q
    |||||| ||||||||||||||||||||||||||||    
T  17345485 actgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 30982935 - 30982863
Alignment:
Q  217 caccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggaca 288  Q
    |||||||||| ||||||||||||| | |||||||| | |||||||  |||||||||| ||||||||||| ||||    
T  30982935 caccgctaatgatttgagaaaatcac-atatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagaca 30982863  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 847918 - 847975
Alignment:
Q  182 ggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaat 239  Q
    |||| ||||||||| ||| || |||||| ||||||  |||||||||||||||||||||    
T  847918 ggaccccggacacgacacagacactgacacgccgatgccgctaataatttgagaaaat 847975  T

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Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 36635296 - 36635349
Alignment:
Q  187 ccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    ||||||||| | |||| |||||| |||| ||||| |||||||||||||||||||    
T  36635296 ccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatc 36635349  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 18844467 - 18844423
Alignment:
Q  276 tcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
    ||||||||||||| | ||||| |||| ||||||||||||||||||    
T  18844467 tcggtgtcggacacgcctaatccgagaagtgtccgtgcttcatag 18844423  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 28470448 - 28470484
Alignment:
Q  284 ggacatggctaattcgaggagtgtccgtgcttcatag 320  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  28470448 ggacatgcctaatccgaggagtgtccgtgcttcatag 28470484  T

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Target: scaffold0652 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 556 - 496
Alignment:
Q  180 acggactccggacacggcacggatactgacgcgccgacaccgctaataatttgagaaaatc 240  Q
    |||||| ||| ||||| |||||| |||||  ||||||||| ||||||||||||| ||||||    
T  556 acggacaccgaacacgccacggacactgatacgccgacactgctaataatttgaaaaaatc 496  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 8592 - 8564
Alignment:
Q  292 ctaattcgaggagtgtccgtgcttcatag 320  Q
    |||||||||||||||||||||||||||||    
T  8592 ctaattcgaggagtgtccgtgcttcatag 8564  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 46731 - 46778
Alignment:
Q  274 tgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 322  Q
    ||||||||||| ||| | ||||| |||||||||||||||||||||||||    
T  46731 tgtcggtgtcg-acacgcctaatccgaggagtgtccgtgcttcatagtt 46778  T

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