View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17985_high_5 (Length: 327)

Name: NF17985_high_5
Description: NF17985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17985_high_5
NF17985_high_5
[»] chr7 (25 HSPs)
chr7 (47-327)||(18873140-18873420)
chr7 (52-327)||(15167955-15168230)
chr7 (56-327)||(10895795-10896066)
chr7 (48-327)||(14422765-14423043)
chr7 (41-325)||(12709833-12710117)
chr7 (41-325)||(13122904-13123188)
chr7 (52-327)||(16009358-16009631)
chr7 (41-325)||(13743492-13743774)
chr7 (41-260)||(12590633-12590850)
chr7 (41-260)||(13007281-13007497)
chr7 (54-248)||(16677152-16677348)
chr7 (54-248)||(17651388-17651584)
chr7 (15-107)||(21230923-21231015)
chr7 (28-107)||(20311026-20311107)
chr7 (52-107)||(11382871-11382926)
chr7 (52-107)||(11389348-11389403)
chr7 (15-107)||(148619-148711)
chr7 (52-171)||(13679428-13679548)
chr7 (51-106)||(2971254-2971309)
chr7 (51-106)||(20906461-20906516)
chr7 (52-106)||(11311059-11311113)
chr7 (46-87)||(831628-831669)
chr7 (46-87)||(1196808-1196849)
chr7 (46-87)||(34958578-34958619)
chr7 (52-108)||(46625961-46626017)
[»] chr5 (15 HSPs)
chr5 (47-327)||(22750921-22751201)
chr5 (15-327)||(38144500-38144810)
chr5 (52-327)||(28370055-28370328)
chr5 (52-327)||(19512167-19512441)
chr5 (47-260)||(23528479-23528690)
chr5 (28-107)||(22438723-22438803)
chr5 (15-107)||(42961566-42961658)
chr5 (52-116)||(18407944-18408008)
chr5 (52-116)||(23111200-23111264)
chr5 (15-67)||(1856445-1856497)
chr5 (15-67)||(21674415-21674467)
chr5 (51-106)||(19236900-19236955)
chr5 (40-166)||(34830024-34830150)
chr5 (51-104)||(22461158-22461211)
chr5 (51-104)||(22467782-22467835)
[»] chr3 (24 HSPs)
chr3 (52-327)||(14762758-14763033)
chr3 (54-327)||(38310802-38311075)
chr3 (54-327)||(20247791-20248056)
chr3 (54-327)||(24192735-24193009)
chr3 (52-327)||(9534109-9534382)
chr3 (51-327)||(23370505-23370780)
chr3 (54-327)||(55499104-55499376)
chr3 (51-325)||(24933828-24934100)
chr3 (28-220)||(16801444-16801635)
chr3 (41-260)||(41455087-41455304)
chr3 (52-113)||(18929239-18929300)
chr3 (52-116)||(17240513-17240577)
chr3 (15-67)||(24122221-24122273)
chr3 (15-67)||(13967762-13967814)
chr3 (15-67)||(13973237-13973289)
chr3 (51-311)||(10389443-10389702)
chr3 (51-106)||(13302240-13302295)
chr3 (51-106)||(13323787-13323842)
chr3 (51-165)||(10414532-10414646)
chr3 (51-165)||(10421202-10421316)
chr3 (51-106)||(12033444-12033499)
chr3 (51-106)||(13312896-13312951)
chr3 (51-106)||(17131732-17131787)
chr3 (51-106)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (35-327)||(11834-12126)
scaffold0026 (51-327)||(111467-111741)
[»] scaffold1773 (1 HSPs)
scaffold1773 (44-327)||(959-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (44-327)||(49960-50241)
[»] chr4 (13 HSPs)
chr4 (41-325)||(8045822-8046105)
chr4 (41-327)||(11847887-11848179)
chr4 (51-240)||(53483573-53483760)
chr4 (15-107)||(15408139-15408231)
chr4 (51-241)||(27906130-27906321)
chr4 (52-108)||(8834895-8834951)
chr4 (52-108)||(13888641-13888697)
chr4 (54-135)||(14486632-14486713)
chr4 (52-108)||(15245215-15245271)
chr4 (57-108)||(22724691-22724742)
chr4 (15-66)||(43284008-43284059)
chr4 (46-87)||(15747551-15747592)
chr4 (52-108)||(15308120-15308176)
[»] chr6 (24 HSPs)
chr6 (52-285)||(23057760-23057993)
chr6 (41-327)||(29614136-29614422)
chr6 (52-326)||(23838980-23839253)
chr6 (15-312)||(18800233-18800529)
chr6 (41-327)||(10986170-10986455)
chr6 (52-327)||(4477638-4477912)
chr6 (54-327)||(21565214-21565485)
chr6 (41-186)||(930085-930229)
chr6 (41-260)||(12168212-12168428)
chr6 (41-260)||(19287121-19287337)
chr6 (41-260)||(19785859-19786075)
chr6 (41-260)||(19878305-19878521)
chr6 (41-260)||(19884081-19884297)
chr6 (51-240)||(34639986-34640173)
chr6 (51-240)||(34646660-34646847)
chr6 (15-107)||(24512807-24512899)
chr6 (51-165)||(25469704-25469816)
chr6 (52-248)||(9187352-9187550)
chr6 (52-108)||(25397172-25397228)
chr6 (52-108)||(19471335-19471391)
chr6 (52-108)||(25348486-25348542)
chr6 (51-135)||(31252394-31252478)
chr6 (54-108)||(25598643-25598697)
chr6 (15-66)||(933615-933666)
[»] chr8 (17 HSPs)
chr8 (54-327)||(8727735-8728008)
chr8 (51-327)||(44477404-44477678)
chr8 (51-327)||(44492562-44492836)
chr8 (41-325)||(23866396-23866680)
chr8 (15-326)||(27940815-27941127)
chr8 (41-260)||(17054440-17054656)
chr8 (52-161)||(18614217-18614327)
chr8 (15-107)||(14056527-14056619)
chr8 (52-116)||(23482053-23482117)
chr8 (19-107)||(25111976-25112064)
chr8 (15-67)||(30765873-30765925)
chr8 (52-108)||(39364919-39364975)
chr8 (52-106)||(29643386-29643440)
chr8 (51-106)||(24320670-24320725)
chr8 (16-76)||(21325730-21325791)
chr8 (16-75)||(21321132-21321192)
chr8 (52-108)||(21931696-21931752)
[»] scaffold0924 (1 HSPs)
scaffold0924 (41-327)||(740-1026)
[»] chr2 (19 HSPs)
chr2 (52-327)||(19661454-19661727)
chr2 (52-327)||(6483499-6483772)
chr2 (52-327)||(6486966-6487239)
chr2 (41-327)||(26583609-26583892)
chr2 (54-327)||(23089057-23089328)
chr2 (54-327)||(23878790-23879060)
chr2 (52-312)||(23101463-23101722)
chr2 (51-165)||(5706023-5706137)
chr2 (15-66)||(6260135-6260186)
chr2 (52-116)||(23265133-23265197)
chr2 (52-116)||(23280201-23280265)
chr2 (52-113)||(21908353-21908414)
chr2 (15-59)||(19665037-19665081)
chr2 (52-108)||(24661576-24661632)
chr2 (51-106)||(10577-10632)
chr2 (41-232)||(23168288-23168483)
chr2 (41-232)||(23579545-23579740)
chr2 (51-106)||(25180929-25180984)
chr2 (42-123)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (54-327)||(14398-14671)
[»] scaffold0029 (2 HSPs)
scaffold0029 (41-260)||(111728-111948)
scaffold0029 (281-327)||(111681-111727)
[»] chr1 (12 HSPs)
chr1 (52-327)||(20437024-20437298)
chr1 (41-260)||(41111884-41112100)
chr1 (52-116)||(32651563-32651627)
chr1 (52-107)||(19663517-19663572)
chr1 (52-116)||(18712790-18712854)
chr1 (52-108)||(20805320-20805376)
chr1 (52-107)||(11158093-11158148)
chr1 (54-108)||(10811785-10811839)
chr1 (51-106)||(20851132-20851187)
chr1 (51-106)||(20857759-20857814)
chr1 (51-106)||(21706276-21706331)
chr1 (51-106)||(21710818-21710873)
[»] scaffold0247 (1 HSPs)
scaffold0247 (15-327)||(11123-11433)
[»] scaffold0553 (1 HSPs)
scaffold0553 (51-327)||(10195-10470)
[»] scaffold0544 (1 HSPs)
scaffold0544 (51-327)||(1525-1800)
[»] scaffold0090 (1 HSPs)
scaffold0090 (15-327)||(17949-18261)
[»] scaffold0117 (2 HSPs)
scaffold0117 (41-327)||(1887-2172)
scaffold0117 (41-327)||(8564-8849)
[»] scaffold0058 (1 HSPs)
scaffold0058 (41-325)||(75-356)
[»] scaffold0154 (1 HSPs)
scaffold0154 (15-248)||(30715-30949)
[»] scaffold0476 (1 HSPs)
scaffold0476 (54-327)||(3295-3567)
[»] scaffold0077 (1 HSPs)
scaffold0077 (54-312)||(3624-3881)
[»] scaffold0634 (1 HSPs)
scaffold0634 (211-327)||(3442-3558)
[»] scaffold0796 (2 HSPs)
scaffold0796 (46-242)||(1727-1920)
scaffold0796 (46-242)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (47-134)||(904-991)
scaffold0456 (47-134)||(8049-8136)
scaffold0456 (195-291)||(806-901)
scaffold0456 (195-291)||(7951-8046)
[»] scaffold0107 (1 HSPs)
scaffold0107 (15-107)||(40495-40587)
[»] scaffold0129 (1 HSPs)
scaffold0129 (45-163)||(45268-45386)
[»] scaffold0019 (1 HSPs)
scaffold0019 (18-107)||(135473-135562)
[»] scaffold0235 (1 HSPs)
scaffold0235 (15-105)||(22556-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (28-107)||(17643-17723)
[»] scaffold0222 (1 HSPs)
scaffold0222 (52-116)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (52-116)||(116887-116951)
[»] scaffold0124 (1 HSPs)
scaffold0124 (52-107)||(34276-34331)
[»] scaffold0461 (1 HSPs)
scaffold0461 (52-116)||(8-72)
[»] scaffold0249 (1 HSPs)
scaffold0249 (15-59)||(2212-2256)
[»] scaffold0146 (1 HSPs)
scaffold0146 (52-116)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (52-116)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (41-103)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (41-241)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (41-140)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (51-135)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (52-171)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (52-108)||(12296-12352)
[»] scaffold0139 (1 HSPs)
scaffold0139 (52-107)||(14997-15052)
[»] scaffold0790 (1 HSPs)
scaffold0790 (40-73)||(5487-5520)
[»] scaffold0001 (1 HSPs)
scaffold0001 (42-123)||(493019-493099)
[»] scaffold0348 (2 HSPs)
scaffold0348 (18-66)||(14620-14668)
scaffold0348 (51-106)||(9336-9391)
[»] scaffold0096 (1 HSPs)
scaffold0096 (48-108)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (54-241)||(73149-73337)
[»] scaffold0127 (1 HSPs)
scaffold0127 (51-106)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (51-106)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (52-106)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (51-135)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (52-108)||(2628-2684)


Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 47 - 327
Target Start/End: Complemental strand, 18873420 - 18873140
Alignment:
Q  47 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 146  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 18873321  T
Q  147 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 246  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  18873320 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 18873221  T
Q  247 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18873220 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgtt 18873140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 52 - 327
Target Start/End: Complemental strand, 15168230 - 15167955
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 251  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  15168130 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 15168031  T
Q  252 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15168030 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgtt 15167955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 56 - 327
Target Start/End: Original strand, 10895795 - 10896066
Alignment:
Q  56 gtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttgat 154  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  155 gatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaatt 254  Q
    ||||||||||| ||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10895895 gatgattctgaggggaa-tgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 10895993  T
Q  255 gattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10895994 gattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgtt 10896066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 48 - 327
Target Start/End: Complemental strand, 14423043 - 14422765
Alignment:
Q  48 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttag 146  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  147 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 246  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  14422943 ggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  247 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| ||||||||    
T  14422844 cataaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgtt 14422765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 41 - 325
Target Start/End: Original strand, 12709833 - 12710117
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  12709833 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 12709931  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 239  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  12709932 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 12710030  T
Q  240 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 325  Q
    |||||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  12710031 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtgattgttg 12710117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 41 - 325
Target Start/End: Original strand, 13122904 - 13123188
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13122904 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13123002  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 239  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  13123003 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 13123101  T
Q  240 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 325  Q
    |||||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  13123102 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtgattgttg 13123188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 52 - 327
Target Start/End: Complemental strand, 16009631 - 16009358
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 151  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 251  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  16009531 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 16009433  T
Q  252 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    | ||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||    
T  16009432 actgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgtt 16009358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 41 - 325
Target Start/End: Complemental strand, 13743774 - 13743492
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13743774 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13743676  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| ||||    
T  13743675 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgc 13743576  T
Q  241 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 325  Q
    ||||||||||||||| |||| |||||||   | |||||| |||||||||||   ||||| |||||||| |||  ||| |||||||    
T  13743575 tgtgatcataaattggttga-aattatgcttggttggataaattgatgaataattgtataatggtggagtgatatgtgattgttg 13743492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 12590633 - 12590850
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12590633 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaa 12590731  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| ||||||||| ||||||| ||||||||||    
T  12590732 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgc 12590829  T
Q  241 tgtgat-cataaattgattga 260  Q
    ||| || ||| ||||||||||    
T  12590830 tgtaatccattaattgattga 12590850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 41 - 260
Target Start/End: Complemental strand, 13007497 - 13007281
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  13007497 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 13007399  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  13007398 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 13007302  T
Q  241 tgtgat-cataaattgattga 260  Q
    ||| || ||| ||||||||||    
T  13007301 tgtaatccatgaattgattga 13007281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 54 - 248
Target Start/End: Complemental strand, 16677348 - 16677152
Alignment:
Q  54 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 151  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 248  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 16677152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 54 - 248
Target Start/End: Complemental strand, 17651584 - 17651388
Alignment:
Q  54 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 151  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 248  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 17651388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 21230923 - 21231015
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    |||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  21230923 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 20311026 - 20311107
Alignment:
Q  28 tgctgtgtaatcattctgcaaaa--ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  20311026 tgctgtgcaatctttctgcaaaaatctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 148711 - 148619
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| |||  |||||||||||||    
T  148711 taggaactgattgtgttgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattg 148619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 171
Target Start/End: Complemental strand, 13679548 - 13679428
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 150  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 13679449  T
Q  151 tgatgatgattctgaagggaa 171  Q
    ||||| ||||| |||| ||||    
T  13679448 tgatgctgattttgaaaggaa 13679428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 2971309 - 2971254
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  2971309 ctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 20906461 - 20906516
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20906461 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  46 caaaactaaggtaagggtgagactatctctcgataatcataa 87  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  46 caaaactaaggtaagggtgagactatctctcgataatcataa 87  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  46 caaaactaaggtaagggtgagactatctctcgataatcataa 87  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    |||| |||||||||||||| ||||| || || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 249; Significance: 1e-138; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 47 - 327
Target Start/End: Complemental strand, 22751201 - 22750921
Alignment:
Q  47 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 146  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 22751102  T
Q  147 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 246  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  22751101 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 22751002  T
Q  247 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22751001 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgtt 22750921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 15 - 327
Target Start/End: Original strand, 38144500 - 38144810
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38144500 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 38144599  T
Q  115 tgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcag 214  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||| ||||||| ||||||| ||    
T  38144600 tgcataattttggaaaataaattgagggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttag 38144698  T
Q  215 aatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagc 314  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||  |||||||||||||||||||  | |||||||||||||| ||| |    
T  38144699 aatgaaaacttaatctatactgttgttgtgatcataaattgattga-aattacgattgattggatgaattgatgaagatttgtatgatggtggagtgatc 38144797  T
Q  315 tgtaattgttgtt 327  Q
    |||| ||||||||    
T  38144798 tgtatttgttgtt 38144810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 52 - 327
Target Start/End: Original strand, 28370055 - 28370328
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 151  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 251  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  28370155 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 28370253  T
Q  252 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||||||||||| ||||| ||||||||    
T  28370254 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgtt 28370328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 52 - 327
Target Start/End: Complemental strand, 19512441 - 19512167
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 150  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  151 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 250  Q
    ||||||||||| || |||| |||||||| | |||||||||||||| ||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  19512341 tgatgatgattttg-aggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 19512243  T
Q  251 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||    
T  19512242 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgtt 19512167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 47 - 260
Target Start/End: Complemental strand, 23528690 - 23528479
Alignment:
Q  47 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 146  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||  |||||    
T  23528690 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 23528592  T
Q  147 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 246  Q
    ||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||||| ||    
T  23528591 ggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaat 23528494  T
Q  247 -cataaattgattga 260  Q
     ||| ||||||||||    
T  23528493 ccatgaattgattga 23528479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 22438723 - 22438803
Alignment:
Q  28 tgctgtgtaatcattctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    ||||||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22438723 tgctgtgcaatctttctgcaaaatctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 42961658 - 42961566
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  42961658 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 116  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 23111200 - 23111264
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 116  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 1856445 - 1856497
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 67  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  1856445 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 1856497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 21674415 - 21674467
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 67  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  21674415 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 21674467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 19236955 - 19236900
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  19236955 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 34830150 - 34830024
Alignment:
Q  40 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattg 138  Q
    |||||||||  |||||||||||||| || ||||| || |||||  |||| ||||||||||||||||  | ||||| | |||||| | |||||| ||||||    
T  34830150 attctgcaattctaaggtaagggtgggattatctttcaataatt-taatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaattg 34830052  T
Q  139 agggttagggtttgatgatgattctgaa 166  Q
    ||  ||||||| ||||| ||||| ||||    
T  34830051 agaattagggtatgatgctgattttgaa 34830024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 22461211 - 22461158
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 104  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22461211 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 22467835 - 22467782
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 104  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22467835 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 244; Significance: 1e-135; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 52 - 327
Target Start/End: Original strand, 14762758 - 14763033
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 251  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14762858 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 14762957  T
Q  252 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  14762958 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggagtgatctgtaattgttgtt 14763033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 54 - 327
Target Start/End: Original strand, 38310802 - 38311075
Alignment:
Q  54 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  154 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 253  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 38311001  T
Q  254 tgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  38311002 tgattgaaaattatgagtgattggatgaatggatgaatttgtgtatgaaggtggaatgatctgtaattgttgtt 38311075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 54 - 327
Target Start/End: Original strand, 20247791 - 20248056
Alignment:
Q  54 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 153  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  154 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 253  Q
    ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 20247990  T
Q  254 tgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||| ||||||||| |||||        |||||||||||||||||||||||||||| ||||||||||||||    
T  20247991 tgattgaaaattatgagtgattg--------gatgaatttgtgtatgatggtggaatgatctgtaattgttgtt 20248056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 54 - 327
Target Start/End: Complemental strand, 24193009 - 24192735
Alignment:
Q  54 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 152  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  153 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtg-atcataa 251  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaatcataa 24192810  T
Q  252 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    | ||||||| || |||||  |||||||| ||||||||||| |  ||||||||||||||||| ||||| || |||||    
T  24192809 actgattga-aaatatgattgattggataaattgatgaatattggtatgatggtggaatgatctgtatttcttgtt 24192735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 52 - 327
Target Start/End: Complemental strand, 9534382 - 9534109
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 151  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 251  Q
    ||||||||||||| || | |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  |||||  ||||||||||    
T  9534282 gatgatgattctg-agtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtgatcataa 9534184  T
Q  252 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||    
T  9534183 attgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgtt 9534109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 51 - 327
Target Start/End: Original strand, 23370505 - 23370780
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 149  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 23370604  T
Q  150 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 249  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  23370605 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 23370703  T
Q  250 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| ||||||||    
T  23370704 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgtt 23370780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 54 - 327
Target Start/End: Original strand, 55499104 - 55499376
Alignment:
Q  54 aggtaagggtgagactatctctcgataatc-ataatctataatttctg-aaaattgacctaattgcatagttttggaagataaa-ttgagggttagggtt 150  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| | ||||||||||||| ||| ||   ||| | |||||| |||||||||||||||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttg-aggataaaattgagggttagggtt 55499202  T
Q  151 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 250  Q
    ||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||   |||||||||||||||    
T  55499203 tgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatacagttgctgtgatcata 55499301  T
Q  251 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||| || ||| |  |||||||||||||||| || || |||||||||||||||||| |||| |||||||||    
T  55499302 aattgattga-aaatataattgattggatgaattgatcaagttttgtatgatggtggaatgatctgt-attgttgtt 55499376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 51 - 325
Target Start/End: Original strand, 24933828 - 24934100
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 150  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||   ||||||||    
T  24933828 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 24933926  T
Q  151 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat-cat 249  Q
    ||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||||||||||||  || |||    
T  24933927 tgatgatgattctgatgg--aatgagtaaagatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgttgttgctgcaatccat 24934024  T
Q  250 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttg 325  Q
     |||||||||| | || |||   |||| |||||||||||||| | ||||||||||| ||||||  ||||||||||||    
T  24934025 taattgattga-atttttgatgtattgtatgaattgatgaatatttgtatgatggtagaatgattctgtaattgttg 24934100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 28 - 220
Target Start/End: Original strand, 16801444 - 16801635
Alignment:
Q  28 tgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 127  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| ||||| ||| ||| |    
T  16801444 tgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttg 16801542  T
Q  128 aagat-aaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaa 220  Q
    ||||| ||||||| |||||||| |||||||||||| ||| | |||  | ||||| |||||||||| | || |||||| | ||||| ||||||||    
T  16801543 aagataaaattgaaggttaggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaa 16801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 41455087 - 41455304
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||   |||     
T  41455087 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataggatgaa 41455185  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
      |||||| |||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||  ||||||||| ||||||| || | |||||    
T  41455186 aattagggattgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttgaaatttaatgtcaagaatgaaatcttaatccatatggttgc 41455283  T
Q  241 tgtgat-cataaattgattga 260  Q
    ||| || ||| ||||||||||    
T  41455284 tgtaatccatgaattgattga 41455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 113  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 116  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 24122221 - 24122273
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 67  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  24122221 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 24122273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 13967762 - 13967814
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 67  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  13967762 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 13967814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 13973237 - 13973289
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 67  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  13973237 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 13973289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 311
Target Start/End: Original strand, 10389443 - 10389702
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 150  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10389443 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10389542  T
Q  151 tgatgatgattctgaagggaaatgggtaataatcatgtta-attctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat-ca 248  Q
    ||||||||||||||| ||  |||||||||  || ||||||  || | | | ||| ||| ||| ||||||||| ||||| | ||||||||||||  || ||    
T  10389543 tgatgatgattctgatgg--aatgggtaaagatgatgttagtttttctcggaatttaacgttaagaatgaaagcttaacccatgttgttgctgcaatcca 10389640  T
Q  249 taaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatg 311  Q
    | |||||||||| | || |||   |||| |||||||||||||| | |||||| |||| |||||    
T  10389641 ttaattgattga-atttttgatgaattgtatgaattgatgaatatttgtatgttggtagaatg 10389702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 13302240 - 13302295
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13302240 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 13323787 - 13323842
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13323787 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 10414532 - 10414646
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 150  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10414532 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10414631  T
Q  151 tgatgatgattctga 165  Q
    |||||||||||||||    
T  10414632 tgatgatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 10421202 - 10421316
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 150  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10421202 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10421301  T
Q  151 tgatgatgattctga 165  Q
    |||||||||||||||    
T  10421302 tgatgatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 12033444 - 12033499
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  12033444 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 13312896 - 13312951
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||| ||||||||    
T  13312896 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 17131787 - 17131732
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  17131787 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 51301644 - 51301589
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  51301644 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 241; Significance: 1e-133; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 35 - 327
Target Start/End: Original strand, 11834 - 12126
Alignment:
Q  35 taatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 134  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11834 taatctttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 11933  T
Q  135 attgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgt 234  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||| |||    
T  11934 attgagagttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgt 12033  T
Q  235 tgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12034 tgttgctgtgatcataagttgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgtt 12126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 51 - 327
Target Start/End: Complemental strand, 111741 - 111467
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 150  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 111642  T
Q  151 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 250  Q
    |||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  111641 tgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 111543  T
Q  251 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||    
T  111542 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgtt 111467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 44 - 327
Target Start/End: Complemental strand, 1240 - 959
Alignment:
Q  44 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 143  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  1240 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 1142  T
Q  144 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 243  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  1141 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 1043  T
Q  244 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1042 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgtt 959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 44 - 327
Target Start/End: Complemental strand, 50241 - 49960
Alignment:
Q  44 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 143  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  50241 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 50143  T
Q  144 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 243  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  50142 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 50044  T
Q  244 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  50043 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgtt 49960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 41 - 325
Target Start/End: Original strand, 8045822 - 8046105
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  8045822 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 8045920  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
    ||||||||||||| ||  |||||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  8045921 ggttagggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgc 8046020  T
Q  241 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 325  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8046021 tgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttg 8046105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 41 - 327
Target Start/End: Complemental strand, 11848179 - 11847887
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa----- 135  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || || ||         
T  11848179 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatca 11848080  T
Q  136 -ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgt 234  Q
     ||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||| |||    
T  11848079 attgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgt 11847980  T
Q  235 tgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  11847979 tgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatgatggaatgatctgtaattgttgtt 11847887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 51 - 240
Target Start/End: Complemental strand, 53483760 - 53483573
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 149  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 53483662  T
Q  150 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
    |||||||||||||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  53483661 ttgatgatgattctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 53483573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 15408231 - 15408139
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    |||||||||||| | ||||| |||| ||||||| | |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15408231 taggaaccgatttttctgtgcaatctttctgcagatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 27906321 - 27906130
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggt 149  Q
    ||||| |||||||| || ||||| || || |||||||| ||||||||||||||||| |  |||| | |||||| | |||||| ||||||||  |||||||    
T  27906321 ctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaattgagaattagggt 27906222  T
Q  150 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 241  Q
     ||||| ||||| |||| | ||| | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  27906221 gtgatgttgattttgaaagaaaaggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 27906130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 14486713 - 14486632
Alignment:
Q  54 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 135  Q
    |||||||||||||||||||  || || |||||||| ||||||||||||||||| | | ||||| || ||| | |||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaa 14486632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  57 taagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    |||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 43284008 - 43284059
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 66  Q
    ||||||||||||  |||||| |||| ||||||||| ||||||||||||||||    
T  43284008 taggaaccgatttcgctgtgcaatctttctgcaaatctaaggtaagggtgag 43284059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  46 caaaactaaggtaagggtgagactatctctcgataatcataa 87  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    |||| |||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 52 - 285
Target Start/End: Complemental strand, 23057993 - 23057760
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 251  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  23057893 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 23057794  T
Q  252 attgattgagaattatgagcgattggatgaattg 285  Q
    ||||||||| ||||||||| ||||||||||||||    
T  23057793 attgattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 41 - 327
Target Start/End: Original strand, 29614136 - 29614422
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaaga-taaattga 139  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||    
T  29614136 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattga 29614235  T
Q  140 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 239  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||| |  |||||| |||||||||||||||||| ||||||||    
T  29614236 gggttagggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgtattg-aatgtttagaatgaaaacttaatctttgttgttg 29614334  T
Q  240 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||||| |||||||| | ||||||  ||||||||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  29614335 ctgtgatcataacttgattgaaatttatgaatgattggatgaattgatgaatttgtgtatgatggtggaataatctgtaagtgttgtt 29614422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 52 - 326
Target Start/End: Complemental strand, 23839253 - 23838980
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagt-tttggaagataaattgagggttagggtt 150  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  151 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 250  Q
    ||||||||||||| ||||| |||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  23839153 tgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 23839055  T
Q  251 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 326  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  23839054 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgt 23838980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 18800529 - 18800233
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 114  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18800529 taggaaccgattttgctgtgtaatccttctgcaaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 18800430  T
Q  115 tgcatagttttggaagata-aattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttca 213  Q
    ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | |||||||    
T  18800429 tgcttagttttggaaaatagaattgagggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttca 18800331  T
Q  214 gaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga 312  Q
     ||||||| |||||||||| |||||| |||||||| ||||||||||| || ||| |  ||||||||||||||||||| ||  |||||||||||||||||    
T  18800330 aaatgaaatcttaatctatattgttgttgtgatcacaaattgattga-aaatataattgattggatgaattgatgaagtttggtatgatggtggaatga 18800233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 41 - 327
Target Start/End: Original strand, 10986170 - 10986455
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattga 139  Q
    ||||||||  ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  10986170 ttctgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattga 10986269  T
Q  140 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 239  Q
    |||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||    
T  10986270 gggttagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttg 10986368  T
Q  240 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
     |||||||||||||||||||| ||||| ||  |||||||||||||||||||  | |||||||||||||| ||| ||||| ||||||||    
T  10986369 ttgtgatcataaattgattga-aattacgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgtt 10986455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 52 - 327
Target Start/End: Complemental strand, 4477912 - 4477638
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 150  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  151 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 250  Q
    |||||||||||||| |||| |||||||| | |||||| ||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||    
T  4477812 tgatgatgattctg-aggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T
Q  251 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||| ||||||||  |||||||||| ||||| ||  | |||||||||||||| ||| ||||| ||||||||    
T  4477713 aattgattga-aattatgattgattggatgatttgataaagatttgtatgatggtggagtgatctgtatttgttgtt 4477638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 54 - 327
Target Start/End: Original strand, 21565214 - 21565485
Alignment:
Q  54 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 151  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 21565312  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 251  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  21565313 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 21565411  T
Q  252 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||||||||||| |||| |||||||||    
T  21565412 attgattga-aaatataattgattggatgaattgatgaagttctgtatgatggtggaatgatctgt-attgttgtt 21565485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 41 - 186
Target Start/End: Original strand, 930085 - 930229
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||    
T  930085 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgag 930184  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcat 186  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||    
T  930185 ggttagggtttgatgatgtttctgaaggg-aatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 41 - 260
Target Start/End: Complemental strand, 12168428 - 12168212
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12168428 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 12168330  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  12168329 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 12168233  T
Q  241 tgtgat-cataaattgattga 260  Q
    ||| || ||| ||||||||||    
T  12168232 tgtaatccatgaattgattga 12168212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 41 - 260
Target Start/End: Complemental strand, 19287337 - 19287121
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19287337 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19287239  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19287238 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19287142  T
Q  241 tgtgat-cataaattgattga 260  Q
    ||| || ||| ||||||||||    
T  19287141 tgtaatccatgaattgattga 19287121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 19785859 - 19786075
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| |||     
T  19785859 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaa 19785957  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19785958 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19786054  T
Q  241 tgtgat-cataaattgattga 260  Q
    ||| || ||| ||||||||||    
T  19786055 tgtaatccatgaattgattga 19786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 41 - 260
Target Start/End: Complemental strand, 19878521 - 19878305
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19878521 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19878423  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19878422 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19878326  T
Q  241 tgtgat-cataaattgattga 260  Q
    ||| || ||| ||||||||||    
T  19878325 tgtaatccatgaattgattga 19878305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 41 - 260
Target Start/End: Complemental strand, 19884297 - 19884081
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19884297 ttctgcaaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19884199  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19884198 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19884102  T
Q  241 tgtgat-cataaattgattga 260  Q
    ||| || ||| ||||||||||    
T  19884101 tgtaatccatgaattgattga 19884081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 51 - 240
Target Start/End: Original strand, 34639986 - 34640173
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 150  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||   ||   ||||||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataataagaaaattagggtt 34640085  T
Q  151 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34640086 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34640173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 51 - 240
Target Start/End: Original strand, 34646660 - 34646847
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 150  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||   ||   ||||||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataataagaaaattagggtt 34646759  T
Q  151 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34646760 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34646847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 24512807 - 24512899
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    |||||||||||| ||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  24512807 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 25469704 - 25469816
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 150  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  25469704 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtt 25469801  T
Q  151 tgatgatgattctga 165  Q
    ||||||| |||||||    
T  25469802 tgatgataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 248
Target Start/End: Complemental strand, 9187550 - 9187352
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat--aaattgagggttaggg 148  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||| ||||| || ||||||| || ||| | ||| ||  |||||| |  ||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaaatagatctaattgaattgttcttgaatataaaaattgggaattaggg 9187451  T
Q  149 tttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 248  Q
     |||||| ||||| |||| ||||    |||| ||||||||| | | ||||||||| || ||||||||||||   ||||||||||  ||||| ||||||||    
T  9187450 -ttgatgctgattttgaaaggaatgatgtaagaatcatgtttaatgtgttgtaatttagtgttcagaatgatttcttaatctataatgttgttgtgatca 9187352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 31252478 - 31252394
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 135  Q
    ||||||||||||||||| ||||| |  || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  31252478 ctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 31252394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  54 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||||| ||||| || |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 933615 - 933666
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 66  Q
    |||||||||||| |||| || |||| ||||||||| ||||||||||||||||    
T  933615 taggaaccgattttgctatgcaatctttctgcaaatctaaggtaagggtgag 933666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 54 - 327
Target Start/End: Original strand, 8727735 - 8728008
Alignment:
Q  54 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 152  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  153 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 252  Q
    | ||||||||||| ||| | |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  8727835 acgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaa 8727933  T
Q  253 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8727934 ttgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgtt 8728008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 51 - 327
Target Start/End: Complemental strand, 44477678 - 44477404
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 150  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44477579  T
Q  151 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 250  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44477578 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44477480  T
Q  251 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||    
T  44477479 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgtt 44477404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 51 - 327
Target Start/End: Complemental strand, 44492836 - 44492562
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 150  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44492737  T
Q  151 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 250  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44492736 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44492638  T
Q  251 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||    
T  44492637 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgtt 44492562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 41 - 325
Target Start/End: Complemental strand, 23866680 - 23866396
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  23866680 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 23866582  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 239  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  23866581 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 23866483  T
Q  240 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 325  Q
    || ||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||    
T  23866482 ctctgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaataatctgtgattgttg 23866396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 15 - 326
Target Start/End: Original strand, 27940815 - 27941127
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    | |    
T  27940815 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattgtttgatt 27940914  T
Q  115 tgcatagtt-ttggaagataa--attgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgtt 211  Q
     | || ||| ||| || ||||  |||| |  ||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| |||||||    
T  27940915 agaattgttcttgaaaaataagaattgggaattagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtt 27941013  T
Q  212 cagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatg 311  Q
    ||||||||||| |||||||||  ||||| | |||||||||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||    
T  27941014 cagaatgaaaatttaatctatactgttgttatgatcataaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtg 27941112  T
Q  312 agctgtaattgttgt 326  Q
    | || || |||||||    
T  27941113 atctatatttgttgt 27941127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 260
Target Start/End: Complemental strand, 17054656 - 17054440
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||     
T  17054656 ttctgcaaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaa 17054558  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  17054557 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 17054461  T
Q  241 tgtgat-cataaattgattga 260  Q
    ||| || ||| ||||||||||    
T  17054460 tgtaatccatgaattgattga 17054440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 161
Target Start/End: Complemental strand, 18614327 - 18614217
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 150  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| | ||||| || ||| | |||||| ||||||||  ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattgagaattagggtt 18614228  T
Q  151 tgatgatgatt 161  Q
    | ||| |||||    
T  18614227 ttatgctgatt 18614217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 14056527 - 14056619
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    |||||||||||| || |||| |||| ||||||||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  14056527 taggaaccgattttgttgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 23482053 - 23482117
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 116  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 25112064 - 25111976
Alignment:
Q  19 aaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    |||||||| || |||| |||| |||| |||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  25112064 aaccgattttgttgtgcaatctttctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 30765873 - 30765925
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 67  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  30765873 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 30765925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 24320670 - 24320725
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  24320670 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 21325730 - 21325791
Alignment:
Q  16 aggaaccgattgtgctgtgtaat-cattctgcaaaactaaggtaagggtgagactatctctc 76  Q
    ||||||||||| ||||||| ||| | ||||||||| |||||||||||||||| ||| |||||    
T  21325730 aggaaccgattttgctgtgcaattctttctgcaaatctaaggtaagggtgaggctaactctc 21325791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 21321132 - 21321192
Alignment:
Q  16 aggaaccgattgtgctgtgtaat-cattctgcaaaactaaggtaagggtgagactatctct 75  Q
    ||||||||||| ||||||| ||| | ||||||||| |||||||||||| ||||||| ||||    
T  21321132 aggaaccgattttgctgtgcaattctttctgcaaatctaaggtaagggcgagactaactct 21321192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 41 - 327
Target Start/End: Original strand, 740 - 1026
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattga 139  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  740 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattga 839  T
Q  140 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 239  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||| |||| || |||||||||||||||||| || |||||||||||| ||||||||    
T  840 gggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatct-tgttgttg 938  T
Q  240 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
     |||||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||||||||||||| ||  ||| |||||||||    
T  939 atgtgatcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaaagatttgtgattgttgtt 1026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 52 - 327
Target Start/End: Original strand, 19661454 - 19661727
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 151  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 251  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||||||    
T  19661554 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataa 19661652  T
Q  252 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| ||||||||    
T  19661653 attgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgtt 19661727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 52 - 327
Target Start/End: Complemental strand, 6483772 - 6483499
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 151  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 251  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6483672 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6483574  T
Q  252 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||||||||||| ||||| ||||||||    
T  6483573 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgtt 6483499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 52 - 327
Target Start/End: Complemental strand, 6487239 - 6486966
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 151  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 251  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6487139 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6487041  T
Q  252 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||||||||||| ||||| ||||||||    
T  6487040 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgtt 6486966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 41 - 327
Target Start/End: Complemental strand, 26583892 - 26583609
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  26583892 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 26583794  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
    |||||||| |||||||||||||||| |||||| ||||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||    
T  26583793 ggttagggcttgatgatgattctgaggggaaa-gggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgc 26583695  T
Q  241 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||| || |||| |   |||||  |  | |||||||||||| |||| || |||||||||||||||||| |||| |||||||||    
T  26583694 tgtgatcacaatttgaattgtaattagaattggttggatgaattggtgaaattttgtatgatggtggaatgatctgt-attgttgtt 26583609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 54 - 327
Target Start/End: Original strand, 23089057 - 23089328
Alignment:
Q  54 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 151  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 23089155  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 251  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  23089156 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 23089254  T
Q  252 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||||||||||| |||| |||||||||    
T  23089255 attgattga-aaatataattgattggatgaattgatgaagttctgtatgatggtggaatgatctgt-attgttgtt 23089328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 327
Target Start/End: Complemental strand, 23879060 - 23878790
Alignment:
Q  54 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 152  Q
    |||||||||||||||||||||||  |||| || || |||||||||  ||||||||||||||||| ||   ||| | ||| |||||||||||||||||| |    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttg-aggattaaattgagggttagggtt-g 23878963  T
Q  153 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 252  Q
     |||||||||||| |||||  ||||||| |||||||||||| ||||||||| | ||||||||||||||| ||||||||||  ||||| ||||||||||||    
T  23878962 ttgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgttgtgatcataaa 23878863  T
Q  253 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||| || ||  |  ||||||||||||||||||| || |||||||||||||||||| |||| |||||||||    
T  23878862 ttgattga-aaatagaattgattggatgaattgatgaagttttgtatgatggtggaatgatctgt-attgttgtt 23878790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 52 - 312
Target Start/End: Original strand, 23101463 - 23101722
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggt 149  Q
    |||||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||  ||   ||| | |||||| ||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttg-aggataaaattgagggttagggt 23101561  T
Q  150 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 249  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  ||||| |||||||||    
T  23101562 ttgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgttgtgatcat 23101660  T
Q  250 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga 312  Q
    ||||||||||| || ||| |  ||||||||||||| ||||| || ||||||||||||||||||    
T  23101661 aaattgattga-aaatataattgattggatgaattcatgaagttctgtatgatggtggaatga 23101722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 5706023 - 5706137
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 149  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 5706121  T
Q  150 ttgatgatgattctga 165  Q
    ||||||||||||||||    
T  5706122 ttgatgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 6260135 - 6260186
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6260135 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 6260186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 116  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 116  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 113  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 19665037 - 19665081
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19665037 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 19665081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 10632 - 10577
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  10632 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 232
Target Start/End: Original strand, 23168288 - 23168483
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 135  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23168288 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23168386  T
Q  136 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 232  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23168387 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 232
Target Start/End: Original strand, 23579545 - 23579740
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 135  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23579545 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23579643  T
Q  136 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 232  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23579644 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23579740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 25180929 - 25180984
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  25180929 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 26885246 - 26885166
Alignment:
Q  42 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 123  Q
    |||||||  |||||||||||||| || ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  26885246 tctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 26885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 54 - 327
Target Start/End: Original strand, 14398 - 14671
Alignment:
Q  54 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 152  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  153 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 252  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcataaa 14597  T
Q  253 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
     ||||||| || |||||  |||||||| ||||||||||| |  ||||||||||||||||| ||||| ||||||||    
T  14598 ctgattga-aaatatgattgattggataaattgatgaatattggtatgatggtggaatgatctgtatttgttgtt 14671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 41 - 260
Target Start/End: Complemental strand, 111948 - 111728
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 139  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  111948 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattga 111849  T
Q  140 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 239  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  111848 gggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctg 111749  T
Q  240 ctgtgatcataaattgattga 260  Q
    |||||||||||||||||||||    
T  111748 ctgtgatcataaattgattga 111728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 111727 - 111681
Alignment:
Q  281 aattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  111727 aattgatgaatttgtgtatgatggtggaatgatctgtaattgttgtt 111681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 52 - 327
Target Start/End: Original strand, 20437024 - 20437298
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 150  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  151 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 250  Q
    |||||||||||||| |||| |||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  20437124 tgatgatgattctg-aggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 20437222  T
Q  251 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||    
T  20437223 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgtt 20437298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 41 - 260
Target Start/End: Complemental strand, 41112100 - 41111884
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||  |||     
T  41112100 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaa 41112002  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
     |||||||||||||||||||||||| ||  |||| ||||  |   ||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  41112001 agttagggtttgatgatgattctgatgg--aatgagtaaagacggtgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 41111905  T
Q  241 tgtgat-cataaattgattga 260  Q
    ||| || ||| ||||||||||    
T  41111904 tgtaatccatgaattgattga 41111884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 116  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 116  Q
    ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  54 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 20851132 - 20851187
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20851132 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 20857759 - 20857814
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20857759 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 21706331 - 21706276
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21706331 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 21710873 - 21710818
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21710873 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 327
Target Start/End: Complemental strand, 11433 - 11123
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 114  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11433 taggaaccgattttgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 11334  T
Q  115 tgcatagttttggaagata-aattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttca 213  Q
    ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | |||||||    
T  11333 tgcttagttttggaaaatagaattgagggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttca 11235  T
Q  214 gaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgag 313  Q
     ||||||| ||||||| ||  |||||||||||||| ||||||||||| || ||| |  ||||||||||||||||||| || |||||||||||||| |||     
T  11234 aaatgaaatcttaatccatactgttgctgtgatcacaaattgattga-aaatataattgattggatgaattgatgaagttttgtatgatggtggattgat 11136  T
Q  314 ctgtaattgttgtt 327  Q
    |||| |||||||||    
T  11135 ctgt-attgttgtt 11123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 51 - 327
Target Start/End: Original strand, 10195 - 10470
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 149  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 10294  T
Q  150 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 249  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  10295 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 10393  T
Q  250 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| ||||||||    
T  10394 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgtt 10470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 51 - 327
Target Start/End: Original strand, 1525 - 1800
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 149  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 1624  T
Q  150 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 249  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  1625 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 1723  T
Q  250 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| ||||||||    
T  1724 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgtt 1800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 15 - 327
Target Start/End: Complemental strand, 18261 - 17949
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 114  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  18261 taggaaccgattgtgttgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaat 18162  T
Q  115 tgcatag-ttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctg-ttgtaatataatgttc 212  Q
    ||| ||| ||| |||| ||||||||||||||| ||||| ||||||||||| | ||||||| ||||||  |||||||||||||| ||||||| | |||| |    
T  18161 tgcttagctttaggaaaataaattgagggttaaggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtcc 18063  T
Q  213 agaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga 312  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||  ||  |||||||| ||||||||||| | ||||||||||||  ||||    
T  18062 agaatgaaaacttaacctatgttgttgctgtgatcatgaattgattga-aatttggattgattggataaattgatgaatatttgtatgatggtgtgatga 17964  T
Q  313 gctgtaattgttgtt 327  Q
     ||||||||||||||    
T  17963 tctgtaattgttgtt 17949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 173; Significance: 5e-93; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 41 - 327
Target Start/End: Original strand, 1887 - 2172
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 139  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  1887 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 1986  T
Q  140 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 239  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  1987 gggttagggtttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttg 2084  T
Q  240 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||||| |||||||| | | ||||| ||||| ||||||||||||||||||||| ||||||||||| | |||||| |||||||    
T  2085 ctgtgatcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgtacgatggtggaataatctgtaaatgttgtt 2172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 41 - 327
Target Start/End: Original strand, 8564 - 8849
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 139  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  8564 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 8663  T
Q  140 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 239  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  8664 gggttagggtttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttg 8761  T
Q  240 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||||| |||||||| | | || || ||||| ||||||||||||||||||||| ||||||||||| | |||||| |||||||    
T  8762 ctgtgatcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgtacgatggtggaataatctgtaaatgttgtt 8849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 41 - 325
Target Start/End: Complemental strand, 356 - 75
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 140  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  356 ttctgcaaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 258  T
Q  141 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 240  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| |||     
T  257 ggttagggtttgatgatgattctg-aggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattga 159  T
Q  241 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 325  Q
    ||||||||||||||| |||| ||||||||  | |||||| |||||||||||   ||||| |||||||| ||| ||||| ||||||    
T  158 tgtgatcataaattggttga-aattatgattggttggataaattgatgaataattgtataatggtggagtgatctgtatttgttg 75  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 15 - 248
Target Start/End: Complemental strand, 30949 - 30715
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 114  Q
    |||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30949 taggaatcgattttgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 30850  T
Q  115 tgcatagttttggaagat-aaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttca 213  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||| ||| |||||  | ||||  |||||||||| | ||||||||  | |||| ||    
T  30849 tgcatagttttggaaggtaaaattgaggattagggtttgatgatgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgca 30750  T
Q  214 gaatgaaaacttaatctatgttgttgctgtgatca 248  Q
    |||||||  | ||||||||  ||||| ||||||||    
T  30749 gaatgaattcctaatctataatgttgatgtgatca 30715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 54 - 327
Target Start/End: Original strand, 3295 - 3567
Alignment:
Q  54 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 151  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||||  |||||| ||||||||||||||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggg-gataaaattgagggttagggttt 3393  T
Q  152 gatgatgattctgaagggaaatgggtaat-aatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 250  Q
    |||||||||||||| ||||| |||||||| ||||||||||||| ||||||||| | ||||||||||||||| ||||||||||  |||||||||||||| |    
T  3394 gatgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatcaca 3492  T
Q  251 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 327  Q
    |||||||||| || ||| |  ||||||||||||||||||| || |||||||||||||||||| |||| |||||||||    
T  3493 aattgattga-aaatataattgattggatgaattgatgaagttttgtatgatggtggaatgatctgt-attgttgtt 3567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 54 - 312
Target Start/End: Original strand, 3624 - 3881
Alignment:
Q  54 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 151  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 3722  T
Q  152 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 251  Q
    |||||||||||||| ||| | |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||  ||||| |||||||||||    
T  3723 gatgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactgttgttgtgatcataa 3821  T
Q  252 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga 312  Q
    ||||||||| || ||| |  ||||||||||||||||||| || ||||||||||||||||||    
T  3822 attgattga-aaatataattgattggatgaattgatgaagttttgtatgatggtggaatga 3881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 211 - 327
Target Start/End: Complemental strand, 3558 - 3442
Alignment:
Q  211 tcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaat 310  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| | |||||||||||||||||||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgtatgatggtggaat 3459  T
Q  311 gagctgtaattgttgtt 327  Q
    || ||||||||||||||    
T  3458 gatctgtaattgttgtt 3442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 46 - 242
Target Start/End: Original strand, 1727 - 1920
Alignment:
Q  46 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 145  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  1727 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 1825  T
Q  146 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 242  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  1826 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 1920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 46 - 242
Target Start/End: Original strand, 5750 - 5943
Alignment:
Q  46 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 145  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  5750 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 5848  T
Q  146 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 242  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  5849 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 991 - 904
Alignment:
Q  47 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 134  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 8136 - 8049
Alignment:
Q  47 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 134  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 901 - 806
Alignment:
Q  195 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 291  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  901 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 806  T

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Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 8046 - 7951
Alignment:
Q  195 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 291  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  8046 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 7951  T

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Target: scaffold0107 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 40495 - 40587
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    |||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  40495 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 163
Target Start/End: Original strand, 45268 - 45386
Alignment:
Q  45 gcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggt 143  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |    
T  45268 gcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaat 45366  T
Q  144 tagggtttgatgatgattct 163  Q
    ||||||||||||||||||||    
T  45367 tagggtttgatgatgattct 45386  T

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Target: scaffold0019 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 135562 - 135473
Alignment:
Q  18 gaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    ||||||||| ||||||| |||| ||||| ||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  135562 gaaccgattttgctgtgcaatctttctgaaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

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Target: scaffold0235 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 22556 - 22646
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaat 105  Q
    |||||||||||| ||||||| |||  ||||||||| | |||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  22556 taggaaccgattttgctgtgcaatatttctgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

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Target: scaffold0310 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 17723 - 17643
Alignment:
Q  28 tgctgtgtaatcattctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    ||||||| |||| |||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  17723 tgctgtgcaatctttctgcaaaatctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

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Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 116  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

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Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 116951 - 116887
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 116  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

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Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

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Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 8 - 72
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 116  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

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Target: scaffold0249 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 2212 - 2256
Alignment:
Q  15 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2212 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 2256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 116  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

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Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 116  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

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Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 1515 - 1453
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 103  Q
    |||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||    
T  1515 ttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 241
Target Start/End: Original strand, 23559 - 23760
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaaga-taaattga 139  Q
    ||||||||  |||||||||||||| || ||||| |  || |||||||| ||||||||||||||||| | ||||  | |||||| | |||||  |||||||    
T  23559 ttctgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaaaagaatagttcttgaagacaaaattga 23658  T
Q  140 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 239  Q
    |  ||||||| ||||| ||||| |||| | |||   |||| ||||||||| | | ||||||||| | |||||||| ||||   ||||||||||  |||||    
T  23659 gaattagggtgtgatgctgattttgaaagaaaagatgtaagaatcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctataatgttg 23758  T
Q  240 ct 241  Q
    ||    
T  23759 ct 23760  T

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Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 780 - 680
Alignment:
Q  41 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagataaattga 139  Q
    |||||||||||||||||||||||| || ||||| || || ||| |||| ||||||||||| |||||| ||||||  | |||||| | ||| |||||||||    
T  780 ttctgcaaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattga 681  T
Q  140 g 140  Q
    |    
T  680 g 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 5857 - 5941
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 135  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  5857 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 171
Target Start/End: Complemental strand, 1441 - 1321
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 150  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 1342  T
Q  151 tgatgatgattctgaagggaa 171  Q
    ||||| ||||| |||| ||||    
T  1341 tgatgctgattttgaaaggaa 1321  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 107  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 5520 - 5487
Alignment:
Q  40 attctgcaaaactaaggtaagggtgagactatct 73  Q
    ||||||||||||||||||||||||||||||||||    
T  5520 attctgcaaaactaaggtaagggtgagactatct 5487  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 493019 - 493099
Alignment:
Q  42 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 123  Q
    |||||||  ||||||||||||||||| ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  493019 tctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

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Target: scaffold0348 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 14620 - 14668
Alignment:
Q  18 gaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 66  Q
    ||||||||| ||||||| |||| ||||||||| ||||||||||||||||    
T  14620 gaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgag 14668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 9391 - 9336
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  9391 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 39503 - 39563
Alignment:
Q  48 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    |||| |||||||||||||| ||| ||||| || |||||||| ||||||||| |||||||||    
T  39503 aaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 73337 - 73149
Alignment:
Q  54 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 152  Q
    ||||||||||| || ||||| || || |||||||| |||||||| |||||||| | ||||| | |||| | | |||||| ||||||||  ||||||| ||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaattgagaattagggtgtg 73238  T
Q  153 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 241  Q
    ||| ||||| |||| | ||  | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  73237 atgttgattttgaaagaaacggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 73149  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 10294 - 10239
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  10294 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 135493 - 135438
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    |||||||||| |||||| ||||| || ||| ||||||| |||||||||||||||||    
T  135493 ctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 106  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 10550 - 10634
Alignment:
Q  51 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 135  Q
    |||||||||| ||| || ||||| || || ||| |||| ||||||||||||||||| | ||||| | |||||| | |||||||||    
T  10550 ctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaatagaatagttcttgaagataaa 10634  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  52 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 108  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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