View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17986_high_10 (Length: 244)
Name: NF17986_high_10
Description: NF17986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17986_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 7332941 - 7332722
Alignment:
| Q |
16 |
cactttctgctcctacacttcagagatttataaaataaattaaaacaaagcaagaattagttaagagcttaatttcttggtgtcacctttttcctcattc |
115 |
Q |
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| T |
7332941 |
cactttctgctcctatacttcagagatttataaaataaattaaaacaaagcaagaattagttaagagcttaatttcttggtgtcacctttatcctcattc |
7332842 |
T |
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| Q |
116 |
atggacaagtgcaaggaagaatattctcttccaaaaggtaacgatttagttacaaacccttctgattcatcattcattcaatgtgtttctttcaaagctg |
215 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
7332841 |
atggacaagtgcaaggaggaatattctcttccaaaaggtaacgatttagttacaaacccttctgattcatcattcattcaatgtgtttctttcaaatctg |
7332742 |
T |
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| Q |
216 |
cattattttgtatatattct |
235 |
Q |
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|||| ||||||||||||||| |
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| T |
7332741 |
cattgttttgtatatattct |
7332722 |
T |
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