View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17986_high_7 (Length: 332)
Name: NF17986_high_7
Description: NF17986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17986_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 4837607 - 4837923
Alignment:
| Q |
1 |
gtattggatatgtgatatgtgctagtttgtaccattttgtcattgggaagcacctacccccaccaccccaagaaaaaatcatatgatcatgttcgtctct |
100 |
Q |
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| T |
4837607 |
gtattggatatgtgatatgtgctagtttgtaccattttgtcattgggaagcacctccccccaccaccccaagaaaaaatcatatgatcatgttcgtctct |
4837706 |
T |
|
| Q |
101 |
ttaagcacacaaatcagcttagctatttgcaaataaaacaaaaaatgttactgcactataaaggaaggtcgctcttgagtaatcagtattgaatcagtgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4837707 |
ttaagcacacaaatcagcttagctatttgcaaataaaacaaaaaatgttactgcactataaaggaaggtcgctcttgagtaatcagtattgaatcagtgt |
4837806 |
T |
|
| Q |
201 |
aaaagtaaatcttttatcgttggtacttttttgagacgctgatactatatctctgtcaaaaacaattgttcatgatcggttttcagtgctactagcttct |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4837807 |
aaaagtaaatcttttatcgttggtacttttttgagacgctgatactatatctctgtcaaaaacaattgttcatgatcggttttcagtgctactagcttct |
4837906 |
T |
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| Q |
301 |
ttacattggggaccagt |
317 |
Q |
| |
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||||||||||||||||| |
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| T |
4837907 |
ttacattggggaccagt |
4837923 |
T |
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