View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17986_low_9 (Length: 256)
Name: NF17986_low_9
Description: NF17986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17986_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 29165402 - 29165165
Alignment:
| Q |
1 |
tgaaagttacagggtaaaatattatcatcgttgataaattactacatgacaaaattgcagatagttccacttagacttggattatctataccaaatttgg |
100 |
Q |
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| T |
29165402 |
tgaaagttacagggtaaaatattatcatcgttgataaattactacatgacaaaattgcagatagttccacttagacttggattatctataccaaatttgg |
29165303 |
T |
|
| Q |
101 |
aatatatgaatgaataatttacatatatgaagaacagatccgttaattcatgttagaaaagaaattgaaatcagtagaaaaatctatatctagtttcaag |
200 |
Q |
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| T |
29165302 |
aatatatgaatgaataatttacatatatgaagaacagatccgttaattcatgttagtaaagaaattgaaatcagtagaaaaatcaatatctagtttcaag |
29165203 |
T |
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| Q |
201 |
taaattttccaactgtatttaaggtaaaattggtatatt |
239 |
Q |
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||||||||||||||||||||||||| ||||||||||||| |
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| T |
29165202 |
taaattttccaactgtatttaaggt-aaattggtatatt |
29165165 |
T |
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