View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17987_low_14 (Length: 220)
Name: NF17987_low_14
Description: NF17987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17987_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 1101486 - 1101674
Alignment:
| Q |
19 |
ttttcagcattcttttcggcgatccaatcataatttcaccattaacaaacaagatcaagatccatgttgttcgcatcttcttccctcctcttattatccc |
118 |
Q |
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| T |
1101486 |
ttttcagcattattttcggcgatccaatcatagtttcaccattaacaaacaagatcaagatccatgttgttcgcatcttcttccctcctcttattatccc |
1101585 |
T |
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| Q |
119 |
tattattctcatttctatttacctcatttgcatccattcacatctacgaccgtgaaccttttcgagatgtcggcaatgcttttcttctc |
207 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1101586 |
tattattctcatttctctttacctcatttgcatccattcacatctacgaccgtgaaccttttcgagatgtcggcaatgcttttcttctc |
1101674 |
T |
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