View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17988_high_1 (Length: 872)

Name: NF17988_high_1
Description: NF17988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17988_high_1
NF17988_high_1
[»] chr8 (64 HSPs)
chr8 (151-872)||(24776728-24777451)
chr8 (42-111)||(15042379-15042448)
chr8 (42-110)||(39484385-39484453)
chr8 (42-111)||(1032975-1033043)
chr8 (42-111)||(4798555-4798624)
chr8 (42-111)||(13762526-13762595)
chr8 (42-111)||(17987463-17987532)
chr8 (42-111)||(43468719-43468788)
chr8 (51-111)||(2696554-2696614)
chr8 (51-111)||(2800040-2800100)
chr8 (51-111)||(35301177-35301237)
chr8 (45-108)||(30942616-30942679)
chr8 (42-108)||(42688068-42688134)
chr8 (42-111)||(9524969-9525038)
chr8 (42-107)||(17980294-17980359)
chr8 (42-111)||(24608497-24608566)
chr8 (42-107)||(43847714-43847779)
chr8 (51-111)||(1588788-1588848)
chr8 (42-110)||(8740671-8740739)
chr8 (42-110)||(25139902-25139970)
chr8 (42-111)||(40249892-40249963)
chr8 (48-111)||(8034548-8034611)
chr8 (44-111)||(42762044-42762111)
chr8 (49-111)||(2376537-2376599)
chr8 (49-111)||(7540502-7540564)
chr8 (49-111)||(10199756-10199818)
chr8 (49-111)||(25119227-25119289)
chr8 (49-111)||(27558885-27558946)
chr8 (43-105)||(41089170-41089232)
chr8 (42-111)||(5184901-5184970)
chr8 (64-105)||(5570931-5570972)
chr8 (42-111)||(24074518-24074587)
chr8 (42-111)||(26703904-26703973)
chr8 (42-111)||(28979038-28979107)
chr8 (42-111)||(34073253-34073322)
chr8 (62-111)||(36359732-36359781)
chr8 (42-110)||(36467898-36467967)
chr8 (42-111)||(42761879-42761948)
chr8 (42-111)||(43874991-43875060)
chr8 (51-111)||(7314754-7314814)
chr8 (51-111)||(14012633-14012693)
chr8 (51-111)||(33570443-33570503)
chr8 (52-111)||(5323944-5324003)
chr8 (51-110)||(6064398-6064457)
chr8 (52-111)||(10310304-10310363)
chr8 (64-111)||(37154548-37154595)
chr8 (53-111)||(14683900-14683957)
chr8 (51-109)||(17110325-17110382)
chr8 (42-111)||(27822082-27822151)
chr8 (51-111)||(31129326-31129383)
chr8 (45-110)||(44923312-44923378)
chr8 (42-111)||(6978832-6978901)
chr8 (65-110)||(8349498-8349543)
chr8 (65-110)||(8350471-8350516)
chr8 (42-111)||(10970278-10970347)
chr8 (53-110)||(13537326-13537383)
chr8 (53-110)||(13626874-13626931)
chr8 (54-111)||(13702366-13702423)
chr8 (62-111)||(17467310-17467358)
chr8 (62-111)||(19957335-19957384)
chr8 (42-110)||(23857338-23857407)
chr8 (51-111)||(38790586-38790647)
chr8 (70-111)||(41616238-41616279)
chr8 (69-110)||(45536757-45536798)
[»] chr2 (62 HSPs)
chr2 (42-110)||(32891293-32891361)
chr2 (49-111)||(44422126-44422188)
chr2 (42-111)||(580797-580866)
chr2 (42-111)||(10262751-10262820)
chr2 (42-111)||(36520794-36520863)
chr2 (42-110)||(9796910-9796977)
chr2 (44-111)||(17154663-17154730)
chr2 (52-110)||(25731956-25732014)
chr2 (43-112)||(24034066-24034135)
chr2 (51-111)||(11133097-11133157)
chr2 (42-110)||(17239913-17239981)
chr2 (51-111)||(29034997-29035057)
chr2 (56-111)||(4529777-4529832)
chr2 (42-108)||(9802905-9802970)
chr2 (42-111)||(8234806-8234875)
chr2 (42-111)||(16028122-16028191)
chr2 (49-110)||(19052626-19052687)
chr2 (42-111)||(22297466-22297535)
chr2 (42-111)||(30474209-30474278)
chr2 (42-107)||(35502091-35502156)
chr2 (49-110)||(36665449-36665510)
chr2 (42-111)||(41699114-41699183)
chr2 (42-111)||(44721718-44721787)
chr2 (51-111)||(3037636-3037696)
chr2 (43-111)||(4157663-4157731)
chr2 (42-110)||(9547142-9547210)
chr2 (42-110)||(20122490-20122558)
chr2 (55-111)||(44187729-44187785)
chr2 (49-111)||(18386826-18386888)
chr2 (48-110)||(32891617-32891679)
chr2 (62-112)||(43200872-43200922)
chr2 (42-111)||(1836600-1836669)
chr2 (51-108)||(2304311-2304368)
chr2 (42-111)||(3179336-3179405)
chr2 (42-111)||(7086265-7086334)
chr2 (42-111)||(10207657-10207726)
chr2 (69-110)||(17543105-17543146)
chr2 (42-111)||(22538551-22538620)
chr2 (62-111)||(33613619-33613668)
chr2 (49-110)||(36426871-36426932)
chr2 (50-111)||(43870973-43871034)
chr2 (42-111)||(44487781-44487850)
chr2 (42-110)||(9791910-9791978)
chr2 (59-111)||(11837018-11837070)
chr2 (51-111)||(21970453-21970513)
chr2 (51-111)||(32527091-32527151)
chr2 (64-111)||(13975163-13975210)
chr2 (49-108)||(16973927-16973986)
chr2 (62-105)||(17777155-17777198)
chr2 (51-110)||(29664624-29664683)
chr2 (64-111)||(36413794-36413841)
chr2 (56-111)||(37123212-37123267)
chr2 (65-111)||(1244604-1244650)
chr2 (65-111)||(5207128-5207173)
chr2 (65-111)||(23405234-23405280)
chr2 (42-111)||(38530208-38530278)
chr2 (69-110)||(3330216-3330257)
chr2 (42-111)||(17115558-17115627)
chr2 (54-111)||(18255645-18255702)
chr2 (42-107)||(25050258-25050323)
chr2 (42-111)||(32943351-32943420)
chr2 (42-111)||(42091289-42091357)
[»] chr6 (52 HSPs)
chr6 (42-111)||(12089109-12089178)
chr6 (42-111)||(12127923-12127992)
chr6 (42-111)||(35190775-35190844)
chr6 (43-111)||(21507215-21507283)
chr6 (52-110)||(11636685-11636743)
chr6 (42-111)||(9438314-9438383)
chr6 (42-111)||(9491749-9491818)
chr6 (42-111)||(22389764-22389833)
chr6 (43-111)||(16251537-16251605)
chr6 (42-112)||(10377137-10377207)
chr6 (48-110)||(22983598-22983660)
chr6 (48-110)||(23804748-23804810)
chr6 (42-111)||(5288359-5288428)
chr6 (42-111)||(7563590-7563659)
chr6 (42-111)||(12101898-12101967)
chr6 (42-111)||(19642561-19642630)
chr6 (42-111)||(30566070-30566139)
chr6 (42-111)||(34396095-34396164)
chr6 (51-111)||(6143986-6144045)
chr6 (51-111)||(14981716-14981776)
chr6 (42-110)||(20716407-20716475)
chr6 (43-111)||(26528580-26528648)
chr6 (44-110)||(6296923-6296989)
chr6 (44-110)||(6303733-6303799)
chr6 (49-111)||(23771052-23771114)
chr6 (49-111)||(25020542-25020604)
chr6 (62-111)||(3294799-3294848)
chr6 (51-108)||(9064887-9064944)
chr6 (43-100)||(10373608-10373665)
chr6 (42-111)||(18904697-18904766)
chr6 (42-111)||(19165363-19165431)
chr6 (62-111)||(19279481-19279530)
chr6 (64-109)||(30833051-30833096)
chr6 (49-109)||(753328-753388)
chr6 (42-110)||(6025402-6025469)
chr6 (42-110)||(18244028-18244095)
chr6 (42-110)||(32057046-32057114)
chr6 (64-107)||(389370-389413)
chr6 (62-105)||(978126-978169)
chr6 (51-110)||(3448373-3448432)
chr6 (42-105)||(11982774-11982836)
chr6 (52-111)||(24470405-24470464)
chr6 (56-111)||(30668198-30668253)
chr6 (72-110)||(17217000-17217038)
chr6 (65-111)||(20568271-20568317)
chr6 (42-111)||(22501030-22501100)
chr6 (53-111)||(29284141-29284199)
chr6 (51-108)||(2945617-2945674)
chr6 (42-111)||(10424549-10424617)
chr6 (42-111)||(16801801-16801870)
chr6 (42-111)||(18631484-18631553)
chr6 (64-105)||(18904302-18904343)
[»] chr4 (84 HSPs)
chr4 (42-111)||(3465595-3465664)
chr4 (42-111)||(32885700-32885769)
chr4 (50-111)||(8690234-8690295)
chr4 (42-111)||(12856196-12856265)
chr4 (50-111)||(37032193-37032254)
chr4 (42-111)||(38433323-38433392)
chr4 (42-111)||(45350288-45350357)
chr4 (42-111)||(45359767-45359836)
chr4 (42-111)||(47017960-47018029)
chr4 (42-108)||(53697997-53698063)
chr4 (42-111)||(9924868-9924937)
chr4 (49-110)||(10098144-10098205)
chr4 (42-111)||(34773697-34773766)
chr4 (42-111)||(51077879-51077948)
chr4 (42-110)||(13211367-13211435)
chr4 (51-111)||(14149814-14149874)
chr4 (51-111)||(28520745-28520805)
chr4 (51-111)||(36954158-36954218)
chr4 (51-111)||(48968224-48968284)
chr4 (52-111)||(35451135-35451194)
chr4 (41-111)||(35333002-35333072)
chr4 (42-111)||(26253964-26254033)
chr4 (51-108)||(42411471-42411528)
chr4 (42-111)||(43115280-43115349)
chr4 (55-111)||(9692987-9693043)
chr4 (42-110)||(21476096-21476164)
chr4 (42-110)||(24234089-24234157)
chr4 (42-110)||(52608583-52608650)
chr4 (51-111)||(53815717-53815777)
chr4 (40-111)||(548901-548972)
chr4 (42-101)||(5635201-5635260)
chr4 (51-110)||(9084780-9084839)
chr4 (56-111)||(33076556-33076611)
chr4 (62-109)||(38690698-38690745)
chr4 (56-111)||(44272962-44273017)
chr4 (56-111)||(49319419-49319474)
chr4 (49-111)||(35747496-35747558)
chr4 (53-111)||(40150496-40150554)
chr4 (49-111)||(44074872-44074934)
chr4 (53-111)||(52031230-52031288)
chr4 (49-111)||(56314780-56314842)
chr4 (49-111)||(56546463-56546525)
chr4 (51-108)||(2565282-2565339)
chr4 (42-111)||(3442855-3442924)
chr4 (42-111)||(9172385-9172454)
chr4 (42-111)||(17859790-17859859)
chr4 (42-111)||(20753139-20753208)
chr4 (42-111)||(31601818-31601887)
chr4 (58-111)||(36257722-36257775)
chr4 (62-111)||(37889620-37889669)
chr4 (42-111)||(53291454-53291523)
chr4 (50-107)||(56531254-56531311)
chr4 (42-110)||(23661373-23661441)
chr4 (51-111)||(36008296-36008356)
chr4 (51-111)||(41003186-41003245)
chr4 (40-79)||(6365334-6365373)
chr4 (62-105)||(10402476-10402519)
chr4 (52-111)||(12820419-12820478)
chr4 (62-105)||(13578457-13578500)
chr4 (49-111)||(20266881-20266944)
chr4 (64-111)||(21200564-21200611)
chr4 (51-110)||(29269330-29269389)
chr4 (43-110)||(30369359-30369425)
chr4 (43-110)||(43336974-43337041)
chr4 (42-109)||(46734985-46735052)
chr4 (65-111)||(2304352-2304398)
chr4 (67-105)||(12625869-12625907)
chr4 (42-80)||(43606145-43606183)
chr4 (44-106)||(48309159-48309221)
chr4 (49-111)||(49280683-49280745)
chr4 (65-111)||(52330923-52330969)
chr4 (42-88)||(55266472-55266518)
chr4 (42-111)||(1297865-1297934)
chr4 (42-111)||(3544446-3544515)
chr4 (42-111)||(6053992-6054061)
chr4 (53-110)||(6637737-6637794)
chr4 (62-111)||(7768802-7768851)
chr4 (69-110)||(11491234-11491275)
chr4 (43-111)||(31578032-31578098)
chr4 (49-110)||(35803108-35803169)
chr4 (65-110)||(43362183-43362228)
chr4 (42-111)||(47416480-47416549)
chr4 (53-102)||(53089669-53089718)
chr4 (42-111)||(55656122-55656191)
[»] chr3 (75 HSPs)
chr3 (42-111)||(49146096-49146165)
chr3 (42-111)||(32508808-32508877)
chr3 (42-110)||(23820641-23820709)
chr3 (51-111)||(36331740-36331800)
chr3 (43-111)||(45713493-45713561)
chr3 (52-111)||(362965-363024)
chr3 (44-110)||(13616089-13616155)
chr3 (49-111)||(14417887-14417949)
chr3 (49-111)||(35483288-35483350)
chr3 (42-111)||(16277965-16278034)
chr3 (42-111)||(33206769-33206838)
chr3 (42-111)||(43566810-43566879)
chr3 (51-111)||(9625004-9625064)
chr3 (51-111)||(27183695-27183755)
chr3 (51-111)||(36476380-36476440)
chr3 (42-108)||(13539981-13540047)
chr3 (49-107)||(24751278-24751336)
chr3 (42-111)||(34344792-34344860)
chr3 (42-111)||(42271027-42271096)
chr3 (42-111)||(49639040-49639109)
chr3 (42-111)||(53467961-53468029)
chr3 (51-111)||(14868706-14868766)
chr3 (63-111)||(24559422-24559470)
chr3 (51-111)||(43774206-43774266)
chr3 (51-111)||(47191394-47191454)
chr3 (51-111)||(50724388-50724448)
chr3 (51-111)||(50788400-50788460)
chr3 (42-105)||(41121883-41121946)
chr3 (68-111)||(42665939-42665982)
chr3 (42-111)||(7448377-7448447)
chr3 (42-111)||(7456519-7456589)
chr3 (49-111)||(32665300-32665362)
chr3 (42-108)||(47062084-47062149)
chr3 (50-111)||(4072747-4072808)
chr3 (49-110)||(15498225-15498286)
chr3 (62-111)||(27066642-27066691)
chr3 (42-111)||(38176066-38176135)
chr3 (62-99)||(46754563-46754600)
chr3 (42-111)||(48173298-48173367)
chr3 (43-111)||(335044-335112)
chr3 (51-103)||(3784091-3784143)
chr3 (51-111)||(10959154-10959214)
chr3 (51-111)||(35477752-35477812)
chr3 (42-110)||(36727478-36727545)
chr3 (43-111)||(37279640-37279708)
chr3 (51-111)||(52030142-52030202)
chr3 (55-111)||(53870859-53870915)
chr3 (42-110)||(55195876-55195944)
chr3 (51-111)||(3955327-3955389)
chr3 (56-111)||(6951805-6951859)
chr3 (44-111)||(17439979-17440046)
chr3 (64-111)||(24160542-24160589)
chr3 (64-111)||(24537861-24537908)
chr3 (52-111)||(27739795-27739854)
chr3 (56-111)||(28951892-28951947)
chr3 (62-105)||(31586982-31587025)
chr3 (64-111)||(31902219-31902266)
chr3 (42-109)||(40786292-40786359)
chr3 (64-111)||(46328938-46328985)
chr3 (64-111)||(51017824-51017870)
chr3 (56-110)||(4478383-4478437)
chr3 (53-111)||(9167285-9167343)
chr3 (49-111)||(20623791-20623853)
chr3 (42-108)||(21420206-21420272)
chr3 (53-111)||(28226201-28226259)
chr3 (42-76)||(33072302-33072336)
chr3 (56-110)||(34407105-34407159)
chr3 (42-108)||(39492833-39492899)
chr3 (61-111)||(45431658-45431708)
chr3 (65-111)||(54983719-54983765)
chr3 (42-111)||(16006520-16006589)
chr3 (42-95)||(20244146-20244199)
chr3 (42-79)||(32876162-32876199)
chr3 (49-110)||(38682273-38682334)
chr3 (65-110)||(50381749-50381794)
[»] chr1 (69 HSPs)
chr1 (42-111)||(19793538-19793607)
chr1 (42-111)||(15774326-15774395)
chr1 (50-111)||(38021272-38021333)
chr1 (42-111)||(49251409-49251478)
chr1 (42-110)||(15368817-15368885)
chr1 (51-111)||(29491491-29491551)
chr1 (42-111)||(538343-538412)
chr1 (42-111)||(4354119-4354188)
chr1 (42-111)||(23464000-23464069)
chr1 (42-111)||(37733767-37733836)
chr1 (51-111)||(11405477-11405537)
chr1 (51-111)||(17350082-17350142)
chr1 (42-110)||(49606713-49606781)
chr1 (42-108)||(23930561-23930627)
chr1 (42-111)||(38019961-38020031)
chr1 (42-107)||(9408632-9408697)
chr1 (62-111)||(19424078-19424127)
chr1 (42-111)||(30649105-30649174)
chr1 (42-110)||(24014623-24014691)
chr1 (51-111)||(39238737-39238797)
chr1 (51-111)||(40678844-40678904)
chr1 (51-111)||(47763399-47763459)
chr1 (42-110)||(48110541-48110609)
chr1 (64-111)||(9768823-9768870)
chr1 (44-111)||(17056894-17056961)
chr1 (49-111)||(3532988-3533049)
chr1 (56-110)||(11238043-11238097)
chr1 (49-111)||(21884594-21884656)
chr1 (49-111)||(27745176-27745238)
chr1 (42-108)||(43555891-43555957)
chr1 (57-111)||(48260203-48260257)
chr1 (42-111)||(1721152-1721221)
chr1 (42-111)||(8364422-8364491)
chr1 (42-110)||(17871096-17871162)
chr1 (42-111)||(18923899-18923968)
chr1 (49-110)||(24662001-24662062)
chr1 (69-110)||(29936696-29936737)
chr1 (62-111)||(41677092-41677141)
chr1 (42-111)||(42831959-42832028)
chr1 (49-110)||(43237792-43237853)
chr1 (51-107)||(2052700-2052756)
chr1 (51-111)||(13870095-13870155)
chr1 (42-110)||(37490902-37490970)
chr1 (43-111)||(46116188-46116256)
chr1 (51-111)||(52833120-52833180)
chr1 (56-111)||(3341750-3341805)
chr1 (42-77)||(5172650-5172685)
chr1 (62-105)||(7180606-7180649)
chr1 (51-110)||(9527447-9527506)
chr1 (42-77)||(16110068-16110103)
chr1 (64-111)||(41182808-41182855)
chr1 (62-105)||(42490402-42490445)
chr1 (62-105)||(50119007-50119050)
chr1 (64-111)||(50199490-50199537)
chr1 (42-112)||(11802033-11802103)
chr1 (49-111)||(18309567-18309629)
chr1 (65-111)||(32635175-32635221)
chr1 (42-111)||(35111661-35111730)
chr1 (42-111)||(6014532-6014599)
chr1 (65-110)||(14262736-14262781)
chr1 (42-111)||(15051559-15051628)
chr1 (42-111)||(17889073-17889142)
chr1 (42-111)||(24636736-24636805)
chr1 (55-111)||(29106882-29106939)
chr1 (42-111)||(39433370-39433439)
chr1 (52-101)||(40814790-40814839)
chr1 (64-109)||(42908805-42908850)
chr1 (42-111)||(43837415-43837484)
chr1 (49-110)||(49916459-49916520)
[»] scaffold0178 (2 HSPs)
scaffold0178 (42-111)||(4335-4404)
scaffold0178 (43-111)||(16078-16146)
[»] chr7 (52 HSPs)
chr7 (42-111)||(2366369-2366438)
chr7 (42-111)||(23685568-23685637)
chr7 (42-111)||(21086116-21086185)
chr7 (50-111)||(24396965-24397026)
chr7 (42-111)||(30644181-30644250)
chr7 (56-110)||(32814853-32814907)
chr7 (49-107)||(44437843-44437901)
chr7 (42-111)||(25711145-25711214)
chr7 (42-111)||(27047729-27047798)
chr7 (42-111)||(30152753-30152822)
chr7 (42-111)||(36315988-36316057)
chr7 (42-111)||(38792224-38792293)
chr7 (42-111)||(47552225-47552294)
chr7 (51-111)||(21285367-21285427)
chr7 (55-110)||(4042283-4042338)
chr7 (64-111)||(11808072-11808119)
chr7 (52-111)||(29658286-29658345)
chr7 (49-111)||(2261498-2261560)
chr7 (43-109)||(17900895-17900961)
chr7 (49-111)||(22965972-22966034)
chr7 (53-111)||(24304297-24304355)
chr7 (42-111)||(46337881-46337951)
chr7 (42-108)||(46716345-46716411)
chr7 (42-111)||(25818298-25818367)
chr7 (51-108)||(31694091-31694148)
chr7 (42-111)||(34948118-34948187)
chr7 (51-111)||(20527443-20527503)
chr7 (43-83)||(34234322-34234362)
chr7 (51-111)||(38451884-38451944)
chr7 (51-111)||(41139108-41139168)
chr7 (63-111)||(41417289-41417337)
chr7 (51-111)||(48525599-48525658)
chr7 (62-105)||(9712190-9712233)
chr7 (56-111)||(14102487-14102542)
chr7 (56-111)||(14412504-14412559)
chr7 (64-111)||(14707326-14707373)
chr7 (62-105)||(21875620-21875663)
chr7 (62-105)||(30806150-30806193)
chr7 (64-111)||(43635622-43635669)
chr7 (49-111)||(5787480-5787542)
chr7 (56-106)||(7465492-7465542)
chr7 (61-111)||(15716671-15716721)
chr7 (49-111)||(29779000-29779062)
chr7 (42-108)||(38778696-38778762)
chr7 (42-111)||(8724392-8724461)
chr7 (62-111)||(9351066-9351115)
chr7 (42-111)||(22706042-22706111)
chr7 (64-109)||(23799334-23799379)
chr7 (69-110)||(31793507-31793548)
chr7 (45-110)||(38025356-38025421)
chr7 (62-111)||(47880178-47880227)
chr7 (56-109)||(48174993-48175046)
[»] chr5 (58 HSPs)
chr5 (42-111)||(18872533-18872602)
chr5 (42-111)||(29096322-29096391)
chr5 (42-111)||(42455408-42455477)
chr5 (51-111)||(4674829-4674889)
chr5 (53-111)||(36045148-36045206)
chr5 (42-111)||(33800905-33800974)
chr5 (51-111)||(1463892-1463952)
chr5 (43-111)||(2029142-2029210)
chr5 (42-110)||(2411309-2411377)
chr5 (42-110)||(23925555-23925623)
chr5 (64-111)||(31556852-31556899)
chr5 (49-111)||(20945905-20945967)
chr5 (42-112)||(29144154-29144224)
chr5 (49-111)||(32158428-32158490)
chr5 (42-111)||(843382-843451)
chr5 (42-111)||(1244741-1244810)
chr5 (54-111)||(10943740-10943797)
chr5 (42-111)||(18478015-18478084)
chr5 (42-111)||(19059018-19059087)
chr5 (42-111)||(19608625-19608694)
chr5 (42-111)||(22599950-22600018)
chr5 (42-111)||(30403762-30403831)
chr5 (51-111)||(6447494-6447554)
chr5 (42-110)||(13754018-13754086)
chr5 (42-98)||(26169039-26169095)
chr5 (51-111)||(37303955-37304015)
chr5 (42-110)||(42801456-42801524)
chr5 (52-111)||(6806654-6806713)
chr5 (51-110)||(9408965-9409024)
chr5 (45-108)||(29266083-29266146)
chr5 (42-109)||(29841360-29841427)
chr5 (49-111)||(8015854-8015916)
chr5 (49-111)||(29106052-29106114)
chr5 (43-108)||(972993-973058)
chr5 (53-110)||(6614053-6614110)
chr5 (64-109)||(13862159-13862203)
chr5 (62-111)||(18101963-18102012)
chr5 (42-111)||(33729790-33729859)
chr5 (42-111)||(34010547-34010616)
chr5 (62-111)||(34729504-34729552)
chr5 (44-108)||(19982265-19982329)
chr5 (51-111)||(20735189-20735249)
chr5 (43-111)||(27219577-27219645)
chr5 (42-102)||(29050812-29050872)
chr5 (51-111)||(42618427-42618487)
chr5 (64-111)||(20191475-20191522)
chr5 (56-111)||(37986881-37986936)
chr5 (64-111)||(42260734-42260781)
chr5 (42-108)||(24205448-24205513)
chr5 (44-110)||(26302509-26302574)
chr5 (64-105)||(3740991-3741032)
chr5 (42-111)||(14487573-14487642)
chr5 (62-111)||(16720592-16720641)
chr5 (69-110)||(17077400-17077441)
chr5 (64-105)||(22228954-22228995)
chr5 (42-111)||(27440312-27440381)
chr5 (62-111)||(38618695-38618744)
chr5 (64-105)||(41319443-41319484)
[»] scaffold1086 (1 HSPs)
scaffold1086 (42-111)||(2500-2569)
[»] scaffold0191 (1 HSPs)
scaffold0191 (42-111)||(16859-16927)
[»] scaffold0343 (1 HSPs)
scaffold0343 (43-111)||(8573-8641)
[»] scaffold0308 (1 HSPs)
scaffold0308 (51-111)||(7097-7157)
[»] scaffold0036 (1 HSPs)
scaffold0036 (51-110)||(25047-25106)
[»] scaffold0334 (1 HSPs)
scaffold0334 (49-110)||(5323-5383)
[»] scaffold0809 (1 HSPs)
scaffold0809 (51-111)||(4820-4879)
[»] scaffold0002 (1 HSPs)
scaffold0002 (50-110)||(451390-451450)
[»] scaffold0006 (1 HSPs)
scaffold0006 (42-89)||(159026-159073)
[»] scaffold1990 (1 HSPs)
scaffold1990 (49-111)||(913-975)
[»] scaffold1112 (1 HSPs)
scaffold1112 (64-110)||(2452-2498)
[»] scaffold0533 (1 HSPs)
scaffold0533 (49-111)||(9345-9407)
[»] scaffold0092 (1 HSPs)
scaffold0092 (49-111)||(47331-47393)
[»] scaffold0219 (1 HSPs)
scaffold0219 (62-111)||(6647-6696)


Alignment Details
Target: chr8 (Bit Score: 613; Significance: 0; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 613; E-Value: 0
Query Start/End: Original strand, 151 - 872
Target Start/End: Complemental strand, 24777451 - 24776728
Alignment:
Q  151 gcttttacgtataaatctctcactgaaaccctaacc--gcgaaaacgttacatagtcgtcctggctttgtttagggttatatccacagcaaagcttcacc 248  Q
    ||||||| ||| |||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24777451 gcttttaggtagaaatctctcagtgaaaccctaaccccgcgaaaacgttacatagtcgtcctggctttgtttagggttgtatccacagcaaagcttcacc 24777352  T
Q  249 cttacggcagtctcctccactccgtattcgacattatcatgtccggggccaagaaaaaccaacctcctctcaagaaaaccaaaactcatcactttcaatc 348  Q
    | |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24777351 cctacggcagcctcctccactccgtattcgacgttatcatgtccggcgccaagaaaaaccaacctcctctcaagaaaaccaaaactcatcaccttcaatc 24777252  T
Q  349 cactccctccaaaagcatacgtacattctttcaaccactcaacaaccctattcctcccaaaaaccctgatactgaatctcctatcaagcttcctcaccaa 448  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24777251 cactccctccaaaagcatacgtacattctttcaaccactcaacagccctattcctcccaaaaaccctgatactgaatctcctatcaagcttcctcaccaa 24777152  T
Q  449 acatcaacttcttcgacttcttctccatcttcttcgtcctcttccaccaatgttgttgaaatgaagaaacggatttcacttttgaagaagacaccgtcgg 548  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24777151 acatcaacttcttcgacttcttctccatcttcttcgtcctcttccaccaatgttgttgaagtgaagaaacggatttcacttttgaagaagacaccgtcgg 24777052  T
Q  549 agtttgatcctagttcaattgcatggtggaagaagggtgatccggtgccgtttctgttcctctcgttggcgttcgacatgatcaaggaagagaaagggag 648  Q
    ||||||||| ||| ||  |||||||||||||||||||||| |||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||    
T  24777051 agtttgatcatagctcggttgcatggtggaagaagggtgaaccggtgccgtttttgtttctctcgttggcgtttgacatgatcaaggaagagaaagggag 24776952  T
Q  649 gaatgcaatgtcggatattggttgtaatgttttgaggacagtgatgcatactacgcctggtgatttattaccagttgtgtatctattttcaaacaggatt 748  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776951 gaatgcgatgtcggatattggttgtaatgtcttgaggacagtgatgcatactacgcctggtgatttattaccagttgtgtatctattttcaaacaggatt 24776852  T
Q  749 gctccaccgtatcaaggtttagaaatgggaattggtaaagctgctgttattaagacacttgctgaggcatgtggaaggactgagaaagacgttaaggaac 848  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24776851 gctccaccgtatcaaggtttagaaatgggagttggtaaagctgctgttattaagacacttgctgaggcatgtggaaggactgagaaagacgttaaggagc 24776752  T
Q  849 aatataaggttggtttgtttcttt 872  Q
    | ||||||||||||||||| ||||    
T  24776751 actataaggttggtttgttccttt 24776728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 15042448 - 15042379
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  15042448 cagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 15042379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 39484453 - 39484385
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| ||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  39484453 cagttggtaggacaatgcattattatatgcaggggccggggttcgaatgccggacaccccacttattca 39484385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 1033043 - 1032975
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| | |||||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  1033043 cagttggtgggacaatgcattattatatgcaggggtcggagttcgaac-ccgaacaccccacttattcac 1032975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 4798624 - 4798555
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  4798624 cagttggtaggataatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 4798555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 13762595 - 13762526
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||||| |  |||||||  ||||||||||||||||||||    
T  13762595 cagttggtaggacaatgcattattatatgcaggggtcagtgttcgaaccacggacaccccacttattcac 13762526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 17987532 - 17987463
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||||| ||||||||||||||| |||| ||||||| |||||||||||| ||||||||    
T  17987532 cagttggtaggataatgcattattatatgcaggggccggagttcgaaccccggacaccccaattattcac 17987463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 43468788 - 43468719
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| | ||||||| |||||||||  ||||||| |||||||||||||||||||||    
T  43468788 cagttggtaggacaatgcattgttatatgtaggggtcggggttcgaactccggacaccccacttattcac 43468719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 2696554 - 2696614
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  2696554 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 2696614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 2800040 - 2800100
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  2800040 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 2800100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 35301237 - 35301177
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||||||||||||  ||||||| |||||||||| ||||||||||    
T  35301237 ggacaatgcattattatatgcaggggtcggggttcgaactccggacaccctacttattcac 35301177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 30942679 - 30942616
Alignment:
Q  45 ttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||||||||||||| ||||||||||||||| |||  ||||||| ||| ||||||||||||||    
T  30942679 ttgataggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttatt 30942616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 42688068 - 42688134
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||| |||||||||||| ||||||||| |||||||||  ||||||| ||| ||||||||||||||    
T  42688068 cagttggtaggacaatgcattattatatgtaggggtcgggattcgaaccccgaacaccccacttatt 42688134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 9524969 - 9525038
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| || ||||||| ||||||||||    
T  9524969 cagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccctacttattcac 9525038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 17980294 - 17980359
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttat 107  Q
    |||||| |||||||| ||| ||||||||||||||| |||  ||||||| |||||||||||||||||    
T  17980294 cagttggtaggacaaagcattattatatgcaggggccggggttcgaaccccggacaccccacttat 17980359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 24608566 - 24608497
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| || ||||||| ||||||||||    
T  24608566 cagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccctacttattcac 24608497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 43847714 - 43847779
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttat 107  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| ||| |||||||||||||    
T  43847714 cagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttat 43847779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 1588788 - 1588848
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  |||||||  ||||||||||||||||||||    
T  1588788 ggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattcac 1588848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 8740739 - 8740671
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| ||||||||||||||||||||||||||||  |   ||||||| |||||||||| |||||||||    
T  8740739 cagttggtaggacaatgcagtattatatgcaggggctgaggttcgaactccggacaccctacttattca 8740671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 25139970 - 25139902
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| ||| |||||||| |||||||||||||||||||  ||||||| ||| ||| ||||||||||||    
T  25139970 cagttgttagaacaatgcattattatatgcaggggtcggggttcgaaccccgaacatcccacttattca 25139902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 40249963 - 40249892
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacac--cccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||| | ||||| ||||||| ||||||||  |||||||||||||    
T  40249963 cagttggtaggacaatgcattattatatgcagtgatcggagttcgaactccggacacctcccacttattcac 40249892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 8034548 - 8034611
Alignment:
Q  48 ataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||| ||||||||||||| | |||  ||||||| ||| |||||||||||||||||    
T  8034548 ataggacaatgcattattatatgcaggagccggggttcgaaccccgaacaccccacttattcac 8034611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 42762111 - 42762044
Alignment:
Q  44 gttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||| || |||||||||||||||   ||| ||  |||||||||||||||||||||    
T  42762111 gttgataggacaatgcattactatatgcaggggtcgaggttcaaatcccggacaccccacttattcac 42762044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 2376537 - 2376599
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||||||||||| |  |||||||  ||||||| ||||||||||||    
T  2376537 taggacaatgcattattatatgcaggggtccgggttcgaacctcggacactccacttattcac 2376599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 7540564 - 7540502
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||||||||||||||||  ||| ||| | ||||| |||||||||||||    
T  7540564 taggacaatgcattattatatgcaggggtcggggttctaaccctggacaacccacttattcac 7540502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 10199818 - 10199756
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||||||||| |||  ||||||| ||  |||||||||||||||||    
T  10199818 taggacaatgcattattatatgcaggggccggggttcgaaccccaaacaccccacttattcac 10199756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 25119227 - 25119289
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||||||||||||| ||  ||||||| ||||||| |||||| ||||||    
T  25119227 taggacaatgcattattatatgcaggggttggggttcgaaccccggacatcccactcattcac 25119289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 27558946 - 27558885
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||| |||||||||||||||||||  ||||||| || ||||||||||||||||||    
T  27558946 taggataatgcattattatatgcaggggtcgggattcgaac-ccagacaccccacttattcac 27558885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 41089232 - 41089170
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    ||||| |||||||||||| |||||||||||||||||||  || |||| ||||||||| |||||    
T  41089232 agttggtaggacaatgcattattatatgcaggggtcggggtttgaacaccggacacctcactt 41089170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 5184970 - 5184901
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||| | |||||||||||||||  ||  ||||||| | |||||||||||||||||||    
T  5184970 cagttggtaggacaatggattattatatgcaggggctggggttcgaaccctggacaccccacttattcac 5184901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 5570931 - 5570972
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  5570931 ttatatgcaggggtcggagttcgaaccccggacaccccactt 5570972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 24074518 - 24074587
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||| |||||| | | |||||||  |||||||| |||||||||||    
T  24074518 cagttggtaggacaatgcattattatatgtaggggttgaagttcgaacctcggacacctcacttattcac 24074587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 26703973 - 26703904
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||| |||||||  ||||||  ||| ||||| |||||||||||    
T  26703973 cagttggtaggacaatgcattattatatgcaagggtcggggttcgaatcccgaacacctcacttattcac 26703904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 28979038 - 28979107
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||   ||||| | ||||||| |||||||||| ||||||| ||||||||| |||||||||||    
T  28979038 cagttgatagggacatgcattgttatatgtaggggtcggaattcgaaccccggacacctcacttattcac 28979107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 34073322 - 34073253
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||||| ||||||||| |||||||    ||||||| |||||||||||||||||||||    
T  34073322 cagttggtaggataatgcattattatatgtaggggtcaaggttcgaaccccggacaccccacttattcac 34073253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 36359781 - 36359732
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||| |||| ||||||  |||||||||||||||||||||    
T  36359781 tattatatgcaggggccggagttcgaatcccggacaccccacttattcac 36359732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 36467967 - 36467898
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcgga-tttcgaacgccggacaccccacttattca 110  Q
    |||||| || ||||||||| |||||||||||||||||||| |||||||| | | ||| ||||||||||||    
T  36467967 cagttggtatgacaatgcattattatatgcaggggtcggagtttcgaactctgtacatcccacttattca 36467898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 42761948 - 42761879
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| || ||||||||| ||||||||||||||| |||  ||||||| | |||||| ||||||||||||    
T  42761948 cagttggtatgacaatgcattattatatgcagggggcggggttcgaactctggacactccacttattcac 42761879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 43875060 - 43874991
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||||| ||||||||| |||||  |   ||||||| || ||||||||||||||||||    
T  43875060 cagttgataggacaatgcattattatatgtaggggctgaggttcgaacaccagacaccccacttattcac 43874991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 7314754 - 7314814
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||| || ||||||||||||||| ||   ||||||| |||||||||||||||||||||    
T  7314754 ggacaatacattattatatgcaggggccgaggttcgaaccccggacaccccacttattcac 7314814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 14012633 - 14012693
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| | ||||||||||||| |||  ||||||  |||||||||||||||||||||    
T  14012633 ggacaatgcattgttatatgcaggggccggggttcgaagtccggacaccccacttattcac 14012693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 33570503 - 33570443
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| | ||||||||| |||||||  |||||||  ||||||||||||||||||||    
T  33570503 ggacaatgcattgttatatgcatgggtcggggttcgaacctcggacaccccacttattcac 33570443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 5323944 - 5324003
Alignment:
Q  52 gacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||| |||||||||||||||||||  ||||||| |||||| || || ||||||||    
T  5323944 gacaatgcattattatatgcaggggtcggggttcgaaccccggactcctcagttattcac 5324003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 6064398 - 6064457
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||| |||||||||||||||||||  |||||||  |||||||  ||||||||||    
T  6064398 ggacaatgcattattatatgcaggggtcggggttcgaacctcggacacttcacttattca 6064457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 10310304 - 10310363
Alignment:
Q  52 gacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||| |||||||| ||| ||||||| || |||  |||||||||||||||||||||    
T  10310304 gacaatgcattattatatacagaggtcggagtttgaatcccggacaccccacttattcac 10310363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 37154548 - 37154595
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||| ||||||| | |||||||||| ||||||||    
T  37154548 ttatatgcaggggtcggaattcgaaccctggacaccccatttattcac 37154595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 14683900 - 14683957
Alignment:
Q  53 acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||| |||||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  14683900 acaatgcattattatatgcaggg-tcggggttcgaaccccggacatcccacttattcac 14683957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 17110325 - 17110382
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattc 109  Q
    |||||||||| |||||||||||||||||||  ||| ||| ||||||| |||||||||||    
T  17110325 ggacaatgcattattatatgcaggggtcggggttcaaac-ccggacatcccacttattc 17110382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 27822082 - 27822151
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggt-cggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||||| |||||||||||||||| ||||||| |||| ||  |||||||||||||||||    
T  27822082 cagttggtaggataatgcattattatatgcaggggtccggattt-gaaccccaaacaccccacttattcac 27822151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 31129326 - 31129383
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||   |||||||  ||||||| |||||||||||||||||||||    
T  31129326 ggacaatgcattattatatg---gggtcggggttcgaaccccggacaccccacttattcac 31129383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 44923378 - 44923312
Alignment:
Q  45 ttgataggacaatgcagtatt-atatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| ||||||||| |||| |||||||||||||||  ||||||| |||||| ||||| |||||||    
T  44923378 ttgataagacaatgcattatttatatgcaggggtcggggttcgaaccccggactccccatttattca 44923312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 6978832 - 6978901
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||| |||||||||||||||| ||  |||||||  || |||| ||| ||||||||    
T  6978832 cagttgataggataatgcattattatatgcaggggttggggttcgaaccacgaacactccatttattcac 6978901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 8349543 - 8349498
Alignment:
Q  65 tatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||| |||| ||||||| ||| ||||||||||||||||    
T  8349543 tatatgcaggggccggagttcgaactccgaacaccccacttattca 8349498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 8350471 - 8350516
Alignment:
Q  65 tatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||    
T  8350471 tatatgcaggggccggagttcgaacctcggacaccccacttattca 8350516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 10970278 - 10970347
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||||| |||||||||||||||  ||  ||| ||| ||| |||||||||||||||||    
T  10970278 cagttggtaggataatgcattattatatgcaggggctggggttcaaaccccgaacaccccacttattcac 10970347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 13537383 - 13537326
Alignment:
Q  53 acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||| | ||||||||||| |||||  ||||||| || |||||||||||||||||    
T  13537383 acaatgcattgttatatgcaggtgtcggggttcgaaccccagacaccccacttattca 13537326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 13626931 - 13626874
Alignment:
Q  53 acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||| | ||||||||||| |||||  ||||||| || |||||||||||||||||    
T  13626931 acaatgcattgttatatgcaggtgtcggggttcgaaccccagacaccccacttattca 13626874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 13702423 - 13702366
Alignment:
Q  54 caatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||| |||||||||||||||||||  |||||||  | |||||| |||||||||||    
T  13702423 caatgcattattatatgcaggggtcggggttcgaacctcagacacctcacttattcac 13702366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 17467310 - 17467358
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||| ||| || ||||| |||||||||||||||||||||    
T  17467310 tattatatgcaggggccgggtt-cgaaccccggacaccccacttattcac 17467358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 19957384 - 19957335
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||| ||   ||||||| |||||||||||||||||||||    
T  19957384 tattatatgcaggggacgaggttcgaaccccggacaccccacttattcac 19957335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 23857407 - 23857338
Alignment:
Q  42 cagttgataggacaatgcagtattatatgca-ggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| ||||||||||| |||| |||  |||||||  ||||||||| |||||||||    
T  23857407 cagttggtaggacaatgcattattatatgcagggggccggggttcgaacctcggacacccgacttattca 23857338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 38790647 - 38790586
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtc-ggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| | ||  ||||||| || ||||||||||||||||||    
T  38790647 ggacaatgcattattatatgcaggggccgggggttcgaaccccagacaccccacttattcac 38790586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 41616238 - 41616279
Alignment:
Q  70 gcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||| |||||||||| ||||||||||    
T  41616238 gcaggggtcggaattcgaactccggacaccctacttattcac 41616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 45536757 - 45536798
Alignment:
Q  69 tgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||| |||| ||||||| ||||||||||||||||||||    
T  45536757 tgcaggggccggagttcgaaccccggacaccccacttattca 45536798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 6e-21; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 32891293 - 32891361
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  32891293 cagttggtaggacaatgcattattatatgcaggggtcggttttcgaaccccggacaccccacttattca 32891361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 44422126 - 44422188
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  44422126 taggacaatgcattattatatgcagggatcggagttcgaaccccggacaccccacttattcac 44422188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 580866 - 580797
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  580866 cagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 580797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 10262751 - 10262820
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||| || ||||||||||||||||||    
T  10262751 cagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattcac 10262820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 36520863 - 36520794
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||| |||||||||  ||||||| |||||||||||||||||||||    
T  36520863 cagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttattcac 36520794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 9796910 - 9796977
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||| |||||||||| |||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  9796910 cagttgat-ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattca 9796977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 17154663 - 17154730
Alignment:
Q  44 gttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||| |||||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  17154663 gttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 17154730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 25731956 - 25732014
Alignment:
Q  52 gacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||| |||||||||||||||||||| |||||||  |||||||||||||||||||    
T  25731956 gacaatgcattattatatgcaggggtcggagttcgaacctcggacaccccacttattca 25732014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 24034135 - 24034066
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcacg 112  Q
    ||||| |||||||||||| |||||||||||||||||||  |||||||  ||||||| |||||||||||||    
T  24034135 agttggtaggacaatgcattattatatgcaggggtcggggttcgaacctcggacactccacttattcacg 24034066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 11133097 - 11133157
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| | |||||||||||||||||  ||||||| |||||||||||||||||||||    
T  11133097 ggacaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcac 11133157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 17239913 - 17239981
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| ||| |||||||| |||||||||||||||||||  |||||||  |||||||||||||||||||    
T  17239913 cagttggtagaacaatgcattattatatgcaggggtcgggattcgaacctcggacaccccacttattca 17239981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 29034997 - 29035057
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  29034997 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 29035057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 4529832 - 4529777
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  4529832 atgcattattatatgcaggggtcggagttcgaactccgaacaccccacttattcac 4529777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 9802905 - 9802970
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||||| |||||||||| ||||||||||| |||||||  ||||||| ||||||||||||||||||    
T  9802905 cagttgat-ggacaatgcattattatatgcaagggtcggggttcgaaccccggacaccccacttatt 9802970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 8234875 - 8234806
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||||||| || ||||||||| ||||| |||  ||||||| |||||||||||||||||||||    
T  8234875 cagttggtaggacaatacattattatatgtaggggccggggttcgaaccccggacaccccacttattcac 8234806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 16028191 - 16028122
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||| ||||||  ||||||| || |||| |||||||||||||    
T  16028191 cagttggtaggacaatgcattattatatgcagtggtcggggttcgaactccagacatcccacttattcac 16028122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 19052687 - 19052626
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||| ||||||||||||||||| |  ||||||| ||||||| ||||||||||||    
T  19052687 taggacaatgcattattatatgcaggggtcaggattcgaaccccggacatcccacttattca 19052626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 22297535 - 22297466
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||  ||  ||||||| |||||||||||| ||||||||    
T  22297535 cagttggtaggacaatgcattattatatgcaggggcaggggttcgaaccccggacaccccatttattcac 22297466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 30474278 - 30474209
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| ||   ||||||| || ||||||||||||||||||    
T  30474278 cagttggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcac 30474209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 35502156 - 35502091
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttat 107  Q
    |||||| |||||||||||| ||||||||  |||||||||| || |||| |||||||||||||||||    
T  35502156 cagttggtaggacaatgcattattatatataggggtcggagtttgaactccggacaccccacttat 35502091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 36665449 - 36665510
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||| ||||||||||||||| |||  |||||||  |||||||||||||||||||    
T  36665449 taggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattca 36665510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 41699114 - 41699183
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| | |||| |||||||||||||||||||  ||||||| ||| |||||||||||||||||    
T  41699114 cagttggtaggatattgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttattcac 41699183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 44721787 - 44721718
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||| |||||||| |||||||||||||||||||  |||||||  ||||||||||| ||||||||    
T  44721787 cagttggtagaacaatgcattattatatgcaggggtcggggttcgaacctcggacaccccatttattcac 44721718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 3037696 - 3037636
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| | ||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  3037696 ggacaatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcac 3037636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 4157731 - 4157663
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||||| ||||||||| ||| |  ||| ||||||| |||||||||||||||||||||    
T  4157731 agttggtaggacaatgcattattatatgtaggtgctggagttcgaaccccggacaccccacttattcac 4157663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 9547210 - 9547142
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||||||||| | ||||||||||||||| |||  ||||||  ||| ||||||||||||||||    
T  9547210 cagttgataggacaatgtattattatatgcaggggccggggttcgaatcccgaacaccccacttattca 9547142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 20122558 - 20122490
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| ||||||||| ||||| |||  ||||||| |||||||| |||||||||||    
T  20122558 cagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacacgccacttattca 20122490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 44187729 - 44187785
Alignment:
Q  55 aatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||||||||||  ||||||| || ||||||||||||||||||    
T  44187729 aatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattcac 44187785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 18386888 - 18386826
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||| |||||  ||  ||||||| |||||||||||||||||||||    
T  18386888 taggacaatgcattattatatgtaggggctggggttcgaactccggacaccccacttattcac 18386826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 32891617 - 32891679
Alignment:
Q  48 ataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||||| |||||||||||||||| ||  ||||||| | | ||||||||||||||||    
T  32891617 ataggacaatgcattattatatgcaggggttggggttcgaaccctgaacaccccacttattca 32891679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 43200872 - 43200922
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcacg 112  Q
    ||||||||||||||| |||| ||||||| ||| ||||||||||||||||||    
T  43200872 tattatatgcaggggccggagttcgaaccccgaacaccccacttattcacg 43200922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 1836600 - 1836669
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||| |||  ||||  ||||||| |||||||||| ||||||||||    
T  1836600 cagttggtaggacaatgcattattatatgaaggaatcggggttcgaaccccggacaccctacttattcac 1836669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 2304311 - 2304368
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||||| | ||||||||| |||||||||  ||||||| ||||||||||||||||||    
T  2304311 ggacaatgtattattatatgtaggggtcggggttcgaaccccggacaccccacttatt 2304368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 3179336 - 3179405
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||| |||||||| ||||||||||||||||||   |||||||  | ||||||||||||||||||    
T  3179336 cagttggtagaacaatgcattattatatgcaggggtcgaggttcgaacctcagacaccccacttattcac 3179405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 7086265 - 7086334
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||| ||||||| ||||||||||||||| |||  ||||||| ||| |||||||| ||||||||    
T  7086265 cagttggtagggcaatgcattattatatgcaggggccgggattcgaaccccgaacaccccaattattcac 7086334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 10207657 - 10207726
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||||| |||||||||||| ||||||| || |||| ||||||||  |||||||||||    
T  10207657 cagttggtaggataatgcattattatatgcagtggtcggagtttgaactccggacacttcacttattcac 10207726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 17543146 - 17543105
Alignment:
Q  69 tgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||| |||| ||||||||||||||||||||||||||||    
T  17543146 tgcaggggccggagttcgaacgccggacaccccacttattca 17543105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 22538551 - 22538620
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||| ||  ||||||  ||| ||||| |||||||||||    
T  22538551 cagttggtaggacaatgcattattatatgcaggggttggggttcgaatcccgaacacctcacttattcac 22538620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 33613668 - 33613619
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||  |||||||| ||||||| |||||||||||||||||||||    
T  33613668 tattatatgcgagggtcggagttcgaaccccggacaccccacttattcac 33613619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 36426932 - 36426871
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||| ||||||||| |||||| ||  ||||||| ||| ||||||||||||||||    
T  36426932 taggacaatgcattattatatgtaggggttggggttcgaactccgaacaccccacttattca 36426871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 43870973 - 43871034
Alignment:
Q  50 aggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||| ||||||||||||| | |||  ||||||  |||||||||||||||||||||    
T  43870973 aggacaatgcattattatatgcaggagccggggttcgaatcccggacaccccacttattcac 43871034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 44487850 - 44487781
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||   ||||| ||||||||||| ||| |||| ||||||| ||||||| |||||||||||||    
T  44487850 cagttgatagggacatgcattattatatgcaagggccggagttcgaaccccggacatcccacttattcac 44487781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 9791978 - 9791910
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| ||||||||| ||| |||||  ||||||  | ||||||||||||||||||    
T  9791978 cagttggtaggacaatgcattattatatgtaggtgtcggggttcgaattctggacaccccacttattca 9791910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 11837018 - 11837070
Alignment:
Q  59 cagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||||||  ||||||| ||||||||| |||||||||||    
T  11837018 cagtattatatgtaggggtcggggttcgaaccccggacacctcacttattcac 11837070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 21970513 - 21970453
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||||||| ||||  ||||||| ||||| ||||| |||||||||    
T  21970513 ggacaatgcattattatatgcagggatcggggttcgaaccccggataccccgcttattcac 21970453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 32527151 - 32527091
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| || |||| |||||||||||||    
T  32527151 ggacaatgcattattatatgcaggggccggggttcgaaccccagacaacccacttattcac 32527091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 13975163 - 13975210
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||| ||||||| |||||||||||| || |||||    
T  13975163 ttatatgcaggggtcggagttcgaactccggacaccccatttcttcac 13975210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 16973927 - 16973986
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||||||| | ||||||||||||||||  |  ||||||| ||||||||||||||||||    
T  16973927 taggacaatggattattatatgcaggggttaggattcgaaccccggacaccccacttatt 16973986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 17777198 - 17777155
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||||  ||||||| |||||||||||||||    
T  17777198 tattatatgcaggggtcggggttcgaaccccggacaccccactt 17777155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 29664624 - 29664683
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||| | |||||||||||||||||  ||| ||  ||||||||||||||||||||    
T  29664624 ggacaatgcattgttatatgcaggggtcggggttcaaatcccggacaccccacttattca 29664683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 36413794 - 36413841
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||| |||| ||||||| | |||||||||||||||||||    
T  36413794 ttatatgcaggggccggagttcgaaccctggacaccccacttattcac 36413841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 37123212 - 37123267
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| ||||||||||||||||||   ||||||| |||||||||| ||||||||||    
T  37123212 atgcattattatatgcaggggtcgagattcgaactccggacaccctacttattcac 37123267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 1244604 - 1244650
Alignment:
Q  65 tatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||| ||  ||||||| |||||||||||||||||||||    
T  1244604 tatatgcaggggtgggggttcgaaccccggacaccccacttattcac 1244650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 5207128 - 5207173
Alignment:
Q  65 tatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||||    
T  5207128 tatatgcaggggtcggatt-cgaaccccagacaccccacttattcac 5207173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 23405234 - 23405280
Alignment:
Q  65 tatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||  ||||||| | |||||||||||||||||||    
T  23405234 tatatgcaggggtcggggttcgaaccctggacaccccacttattcac 23405280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 38530278 - 38530208
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcagggg-tcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||| |||||| | ||  |||||||  ||||||||||||||||||||    
T  38530278 cagttggtaggacaatgcattattatatacaggggcttggggttcgaactgcggacaccccacttattcac 38530208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 3330257 - 3330216
Alignment:
Q  69 tgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||    
T  3330257 tgcagaggtcggagttcgaaccccggacaccccacttattca 3330216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 17115627 - 17115558
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||||| || | |||||||||||  ||||||| ||||||| ||||||| |||| ||||||||    
T  17115627 cagttggtaggacactgtattattatatgcaaaggtcggagttcgaaccccggacatcccatttattcac 17115558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 18255645 - 18255702
Alignment:
Q  54 caatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||| | ||||||||||||| ||  ||||||||  ||||||||||||||||||||    
T  18255645 caatgcatttttatatgcaggggccgagtttcgaacctcggacaccccacttattcac 18255702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 25050323 - 25050258
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttat 107  Q
    |||||| ||||| |||||| |||||||||||||||||||  ||||||| || ||||| | ||||||    
T  25050323 cagttggtaggataatgcattattatatgcaggggtcgggattcgaaccccagacacacaacttat 25050258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 32943351 - 32943420
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||| ||  ||  ||||||   ||||||||||||||||||||    
T  32943351 cagttggtaggacaatgcattattatatgcagaggctggggttcgaatttcggacaccccacttattcac 32943420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 42091357 - 42091289
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||| |||| | |||| ||||||| ||| ||| |||||||||||||    
T  42091357 cagttggtaggacaatgcattattatattcaggagccggagttcgaac-ccgaacaacccacttattcac 42091289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 4e-19; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 12089109 - 12089178
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  12089109 cagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcac 12089178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 12127992 - 12127923
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  12127992 cagttggtaggacaatgcattattatatgcaggggtcggaattcgaaccccggacacgccacttattcac 12127923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 35190775 - 35190844
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||| |||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  35190775 cagttggtagaacaatgcattattatatgcaggggtcggagttcgaaccccgaacaccccacttattcac 35190844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 21507283 - 21507215
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||| | |||||||||||||||||||| || |||| |||||||||||||||||||||    
T  21507283 agttggtaggacaatgtattattatatgcaggggtcggagtttgaactccggacaccccacttattcac 21507215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 11636685 - 11636743
Alignment:
Q  52 gacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  11636685 gacaatgcattattatatgcaggggtcggagttcgaaccccggacaccccactttttca 11636743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 9438314 - 9438383
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||| ||  ||||||| |||||||||||||| ||||||    
T  9438314 cagttggtaggacaatgcattattatatgcaggggttggggttcgaaccccggacaccccactcattcac 9438383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 9491818 - 9491749
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||| ||||| |||  ||||||| |||||||||||||||||||||    
T  9491818 cagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacaccccacttattcac 9491749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 22389833 - 22389764
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||||| |  ||||||  |||||||||||||||||||||    
T  22389833 cagttggtaggacaatgcattattatatgcaggggtcagggttcgaatcccggacaccccacttattcac 22389764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 16251605 - 16251537
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| ||||||||||||  |||||||||||||||||   ||||||| |||||||||||||||||||||    
T  16251605 agttggtaggacaatgcacaattatatgcaggggtcgttgttcgaactccggacaccccacttattcac 16251537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 10377207 - 10377137
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcacg 112  Q
    |||||| |||||||||||| |||||||||||| || |||  ||||||| ||| ||||||||||||||||||    
T  10377207 cagttggtaggacaatgcattattatatgcagaggccggggttcgaaccccgaacaccccacttattcacg 10377137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 22983598 - 22983660
Alignment:
Q  48 ataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||| | ||||||||||||||| |||  ||||||| ||||||||||||||||||||    
T  22983598 ataggacaatgtattattatatgcaggggccggggttcgaaccccggacaccccacttattca 22983660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 23804810 - 23804748
Alignment:
Q  48 ataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||| | ||||||||||||||| |||  ||||||| ||||||||||||||||||||    
T  23804810 ataggacaatgtattattatatgcaggggccggggttcgaaccccggacaccccacttattca 23804748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 5288428 - 5288359
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||||||  | ||||| ||||||||| || ||||||||    
T  5288428 cagttggtaggacaatgcattattatatgcaggggtcggggtccgaactccggacacctcaattattcac 5288359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 7563659 - 7563590
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||| ||||||||||| |  ||| ||| |||||||||||||||||||||    
T  7563659 cagttggtaggacaatgcattattacatgcaggggtcagggttcaaaccccggacaccccacttattcac 7563590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 12101898 - 12101967
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||||||| || ||||||||||||||| |||  ||||||| |||||||||| ||||||||||    
T  12101898 cagttggtaggacaatacattattatatgcaggggccggcgttcgaaccccggacaccctacttattcac 12101967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 19642630 - 19642561
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||  ||||||  ||||||| || ||||||||||||||||||    
T  19642630 cagttggtaggacaatgcattattatatgcatcggtcggggttcgaaccccagacaccccacttattcac 19642561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 30566070 - 30566139
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||| ||| | | || |||| |||||||||||||||||||||    
T  30566070 cagttggtaggacaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcac 30566139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 34396095 - 34396164
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| || ||||||||| ||||||||||||||| |||| ||||||| |||||||||| | ||||||||    
T  34396095 cagttggtacgacaatgcattattatatgcaggggccggagttcgaactccggacaccctatttattcac 34396164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 6143986 - 6144045
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||| ||||||||| || ||||| |||||||||||||||||||||    
T  6143986 ggacaatgcattattatatgtaggggtcgggtt-cgaaccccggacaccccacttattcac 6144045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 14981776 - 14981716
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| | |||||||||||||||||||    
T  14981776 ggacaatgcattattatatgcaggggccggggttcgaaccctggacaccccacttattcac 14981716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 20716475 - 20716407
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| ||||||||| |||||||||  ||||||| || || ||||||||||||||    
T  20716475 cagttggtaggacaatgcattattatatgtaggggtcgggattcgaactccagataccccacttattca 20716407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 26528580 - 26528648
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| ||| |||||||| |||||||||||||||||||  ||| |||  ||||||||||||||||||||    
T  26528580 agttggtagaacaatgcattattatatgcaggggtcggggttcaaacctcggacaccccacttattcac 26528648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 6296989 - 6296923
Alignment:
Q  44 gttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||||||||| |||||||||||  ||||||| |||||||  |||||| || |||||||||    
T  6296989 gttgataggacaatgcattattatatgcaatggtcggaattcgaacctcggacatcctacttattca 6296923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 6303799 - 6303733
Alignment:
Q  44 gttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||||||||| |||||||||||  ||||||| |||||||  |||||| || |||||||||    
T  6303799 gttgataggacaatgcattattatatgcaatggtcggaattcgaacctcggacatcctacttattca 6303733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 23771052 - 23771114
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||||||||||||  ||  ||||||| |||||||||||| ||||||||    
T  23771052 taggacaatgcattattatatgcaggggaaggggttcgaactccggacaccccatttattcac 23771114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 25020604 - 25020542
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| ||||||||||||||| | |  ||||||| |||||||||||||||||||||    
T  25020604 taggacgatgcattattatatgcaggggcctgggttcgaaccccggacaccccacttattcac 25020542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 3294799 - 3294848
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||||  ||||||| ||||||||||||||| |||||    
T  3294799 tattatatgcaggggtcggggttcgaaccccggacaccccacttcttcac 3294848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 9064887 - 9064944
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||||||| ||||||||||||||| |||  ||||||| || |||||||||||||||    
T  9064887 ggacaatgcattattatatgcaggggccggggttcgaaccccagacaccccacttatt 9064944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 10373608 - 10373665
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccc 100  Q
    ||||| ||| |||||||| |||||||||||||||||||  ||||||| ||||||||||    
T  10373608 agttggtagaacaatgcattattatatgcaggggtcggggttcgaaccccggacaccc 10373665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 18904766 - 18904697
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||| | ||| |||  ||||||| | |||||||||||||||||||    
T  18904766 cagttggtaggacaatgcattattatatgtatgggccggggttcgaactctggacaccccacttattcac 18904697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 19165363 - 19165431
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||| ||| ||  ||||||| || ||||||||||||||||||    
T  19165363 cagttggtaggacaatgcattattatatgcagaggttggggttcgaac-cccgacaccccacttattcac 19165431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 19279481 - 19279530
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||| |||| |||||||  ||||||||||||||||||||    
T  19279481 tattatatgcaggggccggagttcgaacctcggacaccccacttattcac 19279530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 30833051 - 30833096
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattc 109  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||    
T  30833051 ttatatgcaggggtcggggttcgaaccccggacaccccacttattc 30833096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 753388 - 753328
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattc 109  Q
    ||||||||| || ||||||||| |||||||||  ||||||| | |||||||||||||||||    
T  753388 taggacaatacattattatatgtaggggtcggggttcgaaccctggacaccccacttattc 753328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 6025469 - 6025402
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| ||||| |||||| |||||||||||||||||||  ||||||| |||||||  |||||||||||    
T  6025469 cagttggtaggataatgcattattatatgcaggggtcgggattcgaaccccggaca-tccacttattca 6025402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 18244095 - 18244028
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| |||||||||||| ||||||  ||||||| ||||| |||| |||||||||    
T  18244095 cagttggtaggacaatgcattattatatgcagaggtcggggttcgaac-ccggataccctacttattca 18244028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 32057046 - 32057114
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||||||||||| |||||||||||| |||||   ||||||| || || | ||||||||||||    
T  32057046 cagttgataggacaatgcattattatatgcagtggtcgaggttcgaaccccagagatcccacttattca 32057114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 389370 - 389413
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttat 107  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||    
T  389370 ttatatgcaggggtcggagttcgaaccccggacactccacttat 389413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 978169 - 978126
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||||  ||||||| |||||||||||||||    
T  978169 tattatatgcaggggtcggggttcgaacaccggacaccccactt 978126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 3448373 - 3448432
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||| | ||||| ||||||| |||  ||||||| ||||||||||||||||||||    
T  3448373 ggacaatgcattgttatacgcaggggccggggttcgaaccccggacaccccacttattca 3448432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 11982774 - 11982836
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||| ||| | |||||| ||||||||||||||||||| ||| |||| |||||||||||||||    
T  11982774 cagttggtagaataatgcattattatatgcaggggtcgggttt-gaaccccggacaccccactt 11982836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 24470464 - 24470405
Alignment:
Q  52 gacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||| |||||||| |||||| |||| ||||||| ||||| | |||||||||||||    
T  24470464 gacaatgcattattatatacaggggccggagttcgaaccccggaaatcccacttattcac 24470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 30668253 - 30668198
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| ||||||||||||||||| || |||||||  || |||||||||||||||||    
T  30668253 atgcattattatatgcaggggtcagagttcgaaccacgaacaccccacttattcac 30668198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 110
Target Start/End: Original strand, 17217000 - 17217038
Alignment:
Q  72 aggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  17217000 aggggtcggagttcgaactccggacaccccacttattca 17217038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 20568317 - 20568271
Alignment:
Q  65 tatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||  ||||||| ||| |||||||||||||||||    
T  20568317 tatatgcaggggtcggggttcgaaccccgaacaccccacttattcac 20568271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 22501030 - 22501100
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggt-cggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||| |||  |||||||   | |||||||||||||||||    
T  22501030 cagttggtaggacaatgcattattatatgcaggggtccgggattcgaaccaagaacaccccacttattcac 22501100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 29284141 - 29284199
Alignment:
Q  53 acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| | ||||||||| |||| ||||  ||||||| |||||||||||||||||||||    
T  29284141 acaatgtattattatatgtagggatcggggttcgaaccccggacaccccacttattcac 29284199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 2945617 - 2945674
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||||||| | |||||||||||||||||  ||| |||  |||||||||||||||||    
T  2945617 ggacaatgcattgttatatgcaggggtcggggttcaaacctcggacaccccacttatt 2945674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 10424617 - 10424549
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||| ||||||||| ||||||||   || |||  |||||||||||||||||||||    
T  10424617 cagttgatag-acaatgcattattatatgtaggggtcgtggtttgaatcccggacaccccacttattcac 10424549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 16801801 - 16801870
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||||||  || ||||||||||||| |||||  ||||||  |||||||| ||||||||||||    
T  16801801 cagttggtaggacaaaacattattatatgcaggagtcggggttcgaattccggacacaccacttattcac 16801870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 18631484 - 18631553
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||||||| || | |||||||||||||||||  ||||||| ||  | |||||||||||||||    
T  18631484 cagttggtaggacaatacattgttatatgcaggggtcgggattcgaaccccaaataccccacttattcac 18631553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 18904302 - 18904343
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||  ||||||| |||||||||||||||    
T  18904302 ttatatgcaggggtcggggttcgaaccccggacaccccactt 18904343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 4e-19; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 3465595 - 3465664
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  3465595 cagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcac 3465664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 32885700 - 32885769
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||||||    
T  32885700 cagttggtaggacaatgcattattatatgcaggggtcggagttcgaacctcggacaccccacttattcac 32885769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 8690234 - 8690295
Alignment:
Q  50 aggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  8690234 aggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcac 8690295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 12856196 - 12856265
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||||| ||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  12856196 cagttggtaggataatgcactattatatgaaggggtcggagttcgaaccccggacaccccacttattcac 12856265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 37032254 - 37032193
Alignment:
Q  50 aggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  37032254 aggacaatgcattattatatgcaggggtcgggattcgaaccccggacaccccacttattcac 37032193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 38433323 - 38433392
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||||| ||||||||| ||| |||||| ||||||| || ||||||||||||||||||    
T  38433323 cagttgataggacaatgcattattatatgtaggagtcggagttcgaaccccagacaccccacttattcac 38433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 45350288 - 45350357
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||||| |||| |||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  45350288 cagttggtaggacagtgcattattatatgcagaggtcggagttcgaaccccggacaccccacttattcac 45350357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 45359767 - 45359836
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||||| |||| |||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  45359767 cagttggtaggacagtgcattattatatgcagaggtcggagttcgaaccccggacaccccacttattcac 45359836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 47018029 - 47017960
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  47018029 cagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 47017960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 53698063 - 53697997
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| ||||||||||||||||||    
T  53698063 cagttgttaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 53697997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 9924868 - 9924937
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||| ||| |||||||||||||||||||  ||||||| |||||||| ||||||||||||    
T  9924868 cagttggtaggacaacgcattattatatgcaggggtcggggttcgaaccccggacactccacttattcac 9924937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 10098144 - 10098205
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||| ||||||||||||||| |||  ||||||| ||||||||||||||||||||    
T  10098144 taggacaatgcattattatatgcaggggccgggattcgaaccccggacaccccacttattca 10098205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 34773766 - 34773697
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||||| |||||||||||||||  |   ||||||| |||||||||||||||||||||    
T  34773766 cagttgataggacaatgcattattatatgcaggggctgaggttcgaaccccggacaccccacttattcac 34773697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 51077879 - 51077948
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||||||| ||||||   || |||||||||||||||||    
T  51077879 cagttggtaggacaatgcattattatatgcaggggtcggagttcgaatctcgaacaccccacttattcac 51077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 13211435 - 13211367
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| ||||||||||| |||||||  ||||||| |||||||| |||||||||||    
T  13211435 cagttggtaggacaatgcattattatatgcatgggtcggggttcgaaccccggacactccacttattca 13211367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 14149814 - 14149874
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  14149814 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 14149874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 28520805 - 28520745
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  28520805 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 28520745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 36954158 - 36954218
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||||||||||||  ||||||| |||||||||||| ||||||||    
T  36954158 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccatttattcac 36954218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 48968284 - 48968224
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  48968284 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 48968224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 35451194 - 35451135
Alignment:
Q  52 gacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||| |||||||||||||||||||| |||||||  |||||||| |||||||||||    
T  35451194 gacaatgcattattatatgcaggggtcggagttcgaactacggacacctcacttattcac 35451135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 35333072 - 35333002
Alignment:
Q  41 ccagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||| |||||||||||| |||||||||||| || |||| ||||||| ||| |||||||| ||||||||    
T  35333072 ccagttggtaggacaatgcattattatatgcagtggccggagttcgaactccgaacaccccatttattcac 35333002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 26253964 - 26254033
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||| |||||| | |||||||||||||||||||| ||||||  |||||||| ||||||||||||    
T  26253964 cagttggtagaacaatgtattattatatgcaggggtcggagttcgaatcccggacactccacttattcac 26254033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 42411528 - 42411471
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    ||||||||||  ||||||||||||||||||  ||||||| ||||||||||||||||||    
T  42411528 ggacaatgcataattatatgcaggggtcggggttcgaaccccggacaccccacttatt 42411471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 43115280 - 43115349
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||| | ||||||||||||||||||   ||||||| |||||||||||| ||||||||    
T  43115280 cagttggtaggacaatgtattattatatgcaggggtcgagattcgaaccccggacaccccatttattcac 43115349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 9692987 - 9693043
Alignment:
Q  55 aatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  9692987 aatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 9693043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 21476164 - 21476096
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||| | |||| ||||||||||||||||||   ||||||| ||||||| ||||||||||||    
T  21476164 cagttgataggatattgcattattatatgcaggggtcgatgttcgaactccggacatcccacttattca 21476096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 24234157 - 24234089
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||| ||||||| ||||||||||||||| |||  || |||| ||||||||||||||||||||    
T  24234157 cagttggtaggtcaatgcattattatatgcaggggccggggtttgaaccccggacaccccacttattca 24234089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 52608650 - 52608583
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| ||||||||||| || ||||| ||||||| ||||||| ||||||||||||    
T  52608650 cagttggtaggacaatgcattattatatgcatggatcggagttcgaaccccggaca-cccacttattca 52608583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 53815717 - 53815777
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||||||||  ||  ||||||| |||||||||||||||||||||    
T  53815717 ggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattcac 53815777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 548972 - 548901
Alignment:
Q  40 cccagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||| |||||||||||| ||||||||||||||| |||  ||||||   | ||||||||||||||||||    
T  548972 cccagttggtaggacaatgcattattatatgcaggggccggggttcgaaactcagacaccccacttattcac 548901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 5635201 - 5635260
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacacccc 101  Q
    |||||| |||||||||||| |||||||||||||||||||  ||| ||| |||||||||||    
T  5635201 cagttgctaggacaatgcattattatatgcaggggtcggggttcaaaccccggacacccc 5635260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 9084780 - 9084839
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||| | |||||||||||||||||  |||||||  |||||||||||||||||||    
T  9084780 ggacaatgcattgttatatgcaggggtcgggattcgaacctcggacaccccacttattca 9084839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 33076556 - 33076611
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||||||||||||  ||||||| |||||||||| ||||||||||    
T  33076556 atgcattattatatgcaggggtcggggttcgaaccccggacaccctacttattcac 33076611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 38690698 - 38690745
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattc 109  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||    
T  38690698 tattatatgcaggggtcggggttcgaaccccggacaccccacttattc 38690745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 44272962 - 44273017
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||||||||||||| |||||||  |||| |||||||||||||||    
T  44272962 atgcattattatatgcaggggtcggagttcgaacctcggataccccacttattcac 44273017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 49319419 - 49319474
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||||||||||||  ||| ||| |||||||||||||||||||||    
T  49319419 atgcattattatatgcaggggtcggggttccaaccccggacaccccacttattcac 49319474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 35747558 - 35747496
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| | |||| |||||||||||||   ||||||| |||||||||||||||||||||    
T  35747558 taggacaatgtattattttatgcaggggtcgaggttcgaactccggacaccccacttattcac 35747496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 40150496 - 40150554
Alignment:
Q  53 acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||| |||||||| ||||||||||  ||||||| ||||||||| |||||||||||    
T  40150496 acaatgcattattatatacaggggtcggggttcgaaccccggacacctcacttattcac 40150554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 44074872 - 44074934
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||||||||||| | | | ||||||  |||||||||||||||||||||    
T  44074872 taggacaatgcattattatatgcagggattgaagttcgaatcccggacaccccacttattcac 44074934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 52031230 - 52031288
Alignment:
Q  53 acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||| || ||||||||||||||||  ||||||| || ||||||||||||||||||    
T  52031230 acaatgcattagtatatgcaggggtcggggttcgaaccccagacaccccacttattcac 52031288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 56314780 - 56314842
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||||||||||| |  |||||||  |||||||| |||||||||||    
T  56314780 taggacaatgcattattatatgcaggggtcagggttcgaaccacggacaccacacttattcac 56314842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 56546525 - 56546463
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||||||||| |||  |||||||  | ||||||||||||||||||    
T  56546525 taggacaatgcattattatatgcaggggccggggttcgaaccacagacaccccacttattcac 56546463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 2565282 - 2565339
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||||||| | |||||||||||||||||| ||||||  ||| ||||||||||||||    
T  2565282 ggacaatgcattgttatatgcaggggtcggagttcgaatcccgaacaccccacttatt 2565339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 3442855 - 3442924
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||  |||| |||  ||||||| || ||||||||||||||||||    
T  3442855 cagttggtaggacaatgcattattatatgtcggggccggggttcgaaccccagacaccccacttattcac 3442924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 9172454 - 9172385
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||||  || |||||| || |||||||    
T  9172454 cagttggtaggacaatgcattattatatgcaggggtcggggttcgaacctcgaacaccctacgtattcac 9172385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 17859790 - 17859859
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||| | ||||| |||| ||||||| ||| ||||| |||||||||||    
T  17859790 cagttggtaggacaatgcattattatacgtaggggccggagttcgaaccccgaacacctcacttattcac 17859859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 20753208 - 20753139
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||||| ||||||||| ||||| |||  ||||||| ||||||||| |||||||||||    
T  20753208 cagttggtaggaaaatgcattattatatgtaggggccggggttcgaaccccggacaccacacttattcac 20753139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 31601818 - 31601887
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||| |||||| | ||||||||||||||| ||   ||||||| |||||||||||||||||||||    
T  31601818 cagttggtagaacaatgtattattatatgcaggggccgagattcgaaccccggacaccccacttattcac 31601887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 36257722 - 36257775
Alignment:
Q  58 gcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||| |||||||||| |||  ||||||| |||||||||||||||||||||    
T  36257722 gcagtattgtatgcaggggccggggttcgaaccccggacaccccacttattcac 36257775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 37889669 - 37889620
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||||  ||||||| ||||||||| |||||||||||    
T  37889669 tattatatgcaggggtcggggttcgaaccccggacacctcacttattcac 37889620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 53291454 - 53291523
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||||| ||||||||||| |||||||| || |||  |||||||||| ||||||||||    
T  53291454 cagttggtaggataatgcattattatatgcatgggtcggaatttgaatcccggacacccaacttattcac 53291523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 56531311 - 56531254
Alignment:
Q  50 aggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttat 107  Q
    ||||||||||| | ||||||||||||| |||  ||||||| |||||||||||||||||    
T  56531311 aggacaatgcattgttatatgcaggggccggggttcgaactccggacaccccacttat 56531254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 23661441 - 23661373
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| | ||||||| |||||| ||  ||||||| ||| ||||||||||||||||    
T  23661441 cagttgctaggacaatgcattgttatatgtaggggtaggggttcgaaccccgaacaccccacttattca 23661373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 36008296 - 36008356
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| | ||||||||||||| |||  ||||||| ||| |||||||||||||||||    
T  36008296 ggacaatgcattgttatatgcaggggccggggttcgaaccccgaacaccccacttattcac 36008356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 41003245 - 41003186
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| | |||||||||||||| | | ||||||| |||||||||||||||||||||    
T  41003245 ggacaatgcattgttatatgcaggggttg-agttcgaactccggacaccccacttattcac 41003186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 6365334 - 6365373
Alignment:
Q  40 cccagttgataggacaatgcagtattatatgcaggggtcg 79  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  6365334 cccagttggtaggacaatgcattattatatgcaggggtcg 6365373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 10402476 - 10402519
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||    
T  10402476 tattatatgcaggggtcggagttcgaaccccggacacctcactt 10402519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 12820478 - 12820419
Alignment:
Q  52 gacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||| | |||||||||||||||||  || |||| | |||||||||||||||||||    
T  12820478 gacaatgcattgttatatgcaggggtcggggttagaaccctggacaccccacttattcac 12820419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 13578500 - 13578457
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||||  ||||||| |||||||||||||||    
T  13578500 tattatatgcaggggtcggggttcgaaccccggacaccccactt 13578457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 20266881 - 20266944
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggaca-ccccacttattcac 111  Q
    |||||||||||| ||||||||||||||| | || || |||| ||||||| ||||||||||||||    
T  20266881 taggacaatgcattattatatgcaggggccagagtttgaaccccggacacccccacttattcac 20266944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 21200564 - 21200611
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||  ||||||| |||| ||||||||||||||||    
T  21200564 ttatatgcaggggtcggggttcgaactccggtcaccccacttattcac 21200611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 29269389 - 29269330
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||| ||||||||| |||||  ||  ||||||| ||||||||||||||||||||    
T  29269389 ggacaatgcattattatatgtaggggctgggattcgaaccccggacaccccacttattca 29269330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 30369359 - 30369425
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||| |||||||||||| | ||||||||||||  | || ||||||| ||||||||||||||||||||    
T  30369359 agttggtaggacaatgcattgttatatgcagggc-cagaattcgaactccggacaccccacttattca 30369425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 43336974 - 43337041
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||| |||||| ||||||||| |||| ||||  ||||||  ||| ||||||||||||||||    
T  43336974 agttgataggagaatgcattattatatgtagggatcggggttcgaatcccgaacaccccacttattca 43337041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 46735052 - 46734985
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattc 109  Q
    |||||| ||||||| |||| |||||||||||||| ||||  ||| |||  ||||||||||||||||||    
T  46735052 cagttggtaggacactgcattattatatgcagggatcggggttcaaacctcggacaccccacttattc 46734985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 2304398 - 2304352
Alignment:
Q  65 tatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||| || |||| ||||||||||||| |||||||||||||||    
T  2304398 tatatgcagcggccggagttcgaacgccggataccccacttattcac 2304352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 12625869 - 12625907
Alignment:
Q  67 tatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  12625869 tatgcaggggtcggagttcgaacaccggacaccccactt 12625907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 43606183 - 43606145
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcgg 80  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  43606183 cagttgataggacaatgcattattatatgcagggatcgg 43606145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 48309159 - 48309221
Alignment:
Q  44 gttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccactta 106  Q
    |||| |||||||||||| ||||||||||||||||| || ||||||| | | |||||| |||||    
T  48309159 gttggtaggacaatgcattattatatgcaggggtctgagttcgaaccctgaacacccgactta 48309221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 49280745 - 49280683
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| | |||||||||||||||||||  || |||| | ||||||| |||||||||||    
T  49280745 taggacaatgaattattatatgcaggggtcggtgtttgaaccctggacacctcacttattcac 49280683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 52330969 - 52330923
Alignment:
Q  65 tatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||  ||||||| |||||||||||||||||||||    
T  52330969 tatatgcaggggccggggttcgaactccggacaccccacttattcac 52330923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 55266518 - 55266472
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaa 88  Q
    |||||| ||| |||||||| |||||||||||||||||||| ||||||    
T  55266518 cagttggtagaacaatgcattattatatgcaggggtcggagttcgaa 55266472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 1297865 - 1297934
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||||||  || |||||||||||||||||||  ||||||| | | |||| ||||||||||||    
T  1297865 cagttggtaggacaacacattattatatgcaggggtcgggattcgaaccctgaacactccacttattcac 1297934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 3544515 - 3544446
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||  || |||  ||||||| |||||| ||| ||||||||||    
T  3544515 cagttggtaggacaatgcattattatatgcaaaggccggggttcgaaccccggactccctacttattcac 3544446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 6053992 - 6054061
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| ||  ||||| ||| |||||||    
T  6053992 cagttggtaggacaatgcattattatatgcaggggccggggttcgaactccaaacaccacacgtattcac 6054061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 6637794 - 6637737
Alignment:
Q  53 acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||| || |||||||||||||||| ||  ||||||| ||| ||||||||||||||||    
T  6637794 acaatacattattatatgcaggggttggggttcgaaccccgaacaccccacttattca 6637737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 7768851 - 7768802
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| || |||  ||||||| |||||||||||||||||||||    
T  7768851 tattatatgcagaggccggggttcgaaccccggacaccccacttattcac 7768802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 11491275 - 11491234
Alignment:
Q  69 tgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||| |||| ||||||| ||||||||||||||||||||    
T  11491275 tgcaggggccggagttcgaaccccggacaccccacttattca 11491234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 31578032 - 31578098
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||||| ||||||||||  |||| ||  ||||||  |||||||||||||||||||||    
T  31578032 agttggtaggacaatgcattattatatgc--gggttgggattcgaaacccggacaccccacttattcac 31578098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 35803169 - 35803108
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||| ||||||||||||||  || | ||||||| |  |||||||||||||||||    
T  35803169 taggacaatgcattattatatgcagggaccgaagttcgaactctcgacaccccacttattca 35803108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 43362228 - 43362183
Alignment:
Q  65 tatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||| ||||||||||  ||||||| ||||||||||||||||||||    
T  43362228 tatattcaggggtcggggttcgaaccccggacaccccacttattca 43362183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 47416480 - 47416549
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||| | |||||||||||||||| ||  ||||||   ||||||||||||||||||||    
T  47416480 cagttggtaggataatggattattatatgcaggggttggggttcgaatctcggacaccccacttattcac 47416549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 53089669 - 53089718
Alignment:
Q  53 acaatgcagtattatatgcaggggtcggatttcgaacgccggacacccca 102  Q
    |||||||| |||||||||||||||||||| ||||||  ||| ||||||||    
T  53089669 acaatgcattattatatgcaggggtcggagttcgaatcccgaacacccca 53089718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 55656191 - 55656122
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| | ||||||| || ||||||||||||||| |||| ||| ||  |||||||||| ||||||||||    
T  55656191 cagttggttggacaatacattattatatgcaggggccggagttcaaatcccggacaccctacttattcac 55656122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 4e-19; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 49146096 - 49146165
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  49146096 cagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcac 49146165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 32508877 - 32508808
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||| |||||||||||||||||||  ||||||| ||| |||||||||||||||||    
T  32508877 cagttgataggataatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttattcac 32508808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 23820641 - 23820709
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| ||||||||||||||| |||| ||||||| || |||||||||||||||||    
T  23820641 cagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccagacaccccacttattca 23820709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 36331800 - 36331740
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  36331800 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcac 36331740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 45713493 - 45713561
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||||| ||||||||| ||||| |||| ||||||| |||||||||||||||||||||    
T  45713493 agttggtaggacaatgcattattatatgtaggggccggagttcgaactccggacaccccacttattcac 45713561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 362965 - 363024
Alignment:
Q  52 gacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  362965 gacaatgcattattatatgcaggggtcggagttcgaaccccggataccccacttattcac 363024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 13616155 - 13616089
Alignment:
Q  44 gttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||| |||||||||||| ||||||||| |||||||||| |||||||  |||||||||||||||||||    
T  13616155 gttggtaggacaatgcattattatatgtaggggtcggagttcgaacctcggacaccccacttattca 13616089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 14417887 - 14417949
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||||||||||||  ||| ||||||| |||||||||||||||||||||    
T  14417887 taggacaatgcattattatatgcaggggctggagttcgaaccccggacaccccacttattcac 14417949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 35483288 - 35483350
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  35483288 taggacaatgcattattatatgcaggggtcggggttcgaatcccggacaccccacttattcac 35483350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 16278034 - 16277965
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||| ||||| |||||||||||||||||||  ||||||| ||||||| |||||||||||||    
T  16278034 cagttggtaggaccatgcattattatatgcaggggtcgggattcgaactccggacatcccacttattcac 16277965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 33206769 - 33206838
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||  ||  ||||||| |||||||||||||||||||||    
T  33206769 cagttggtaggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattcac 33206838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 43566879 - 43566810
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||||  | ||||||||||||||||||    
T  43566879 cagttggtaggacaatgcattattatatgcaggggtcggggttcgaacctcagacaccccacttattcac 43566810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 9625004 - 9625064
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  9625004 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 9625064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 27183755 - 27183695
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  27183755 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 27183695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 36476380 - 36476440
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||| |||||||||||||||||    
T  36476380 ggacaatgcattattatatgcaggggccggagttcgaaccccgaacaccccacttattcac 36476440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 13540047 - 13539981
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||| |||||||||||| ||||||||| |||||| ||  ||||||| ||||||||||||||||||    
T  13540047 cagttggtaggacaatgcattattatatgtaggggttggggttcgaaccccggacaccccacttatt 13539981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 24751336 - 24751278
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttat 107  Q
    |||||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||    
T  24751336 taggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttat 24751278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 34344860 - 34344792
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||||| ||||||||||||| | |||| ||  ||| |||||||||||||||||||||    
T  34344860 cagttgataggacaatgcattattatatgcaggtgccggagtt-taaccccggacaccccacttattcac 34344792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 42271096 - 42271027
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| | ||||||||||||| |||  ||||||| |||||||||| ||||||||||    
T  42271096 cagttggtaggacaatgcattgttatatgcaggggccggggttcgaactccggacaccctacttattcac 42271027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 49639040 - 49639109
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||| ||||| |||  ||||||| ||| |||||||||||||||||    
T  49639040 cagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccgaacaccccacttattcac 49639109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 53467961 - 53468029
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||  |||||||  ||||||||||||||||||||    
T  53467961 cagttggtaggacaatgcattattatatgcagggg-cggggttcgaacctcggacaccccacttattcac 53468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 14868706 - 14868766
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| ||| |||||||||||||||||    
T  14868706 ggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttattcac 14868766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 24559422 - 24559470
Alignment:
Q  63 attatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  24559422 attatatgcaggggtcggggttcgaaccccggacaccccacttattcac 24559470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 43774206 - 43774266
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| | |||||||||||||||||  ||||||| || ||||||||||||||||||    
T  43774206 ggacaatgcattgttatatgcaggggtcggggttcgaaccccagacaccccacttattcac 43774266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 47191394 - 47191454
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||||||||  ||| ||||||| ||| |||||||||||||||||    
T  47191394 ggacaatgcattattatatgcaggggctggagttcgaaccccgaacaccccacttattcac 47191454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 50724388 - 50724448
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||||||||| ||  |||||||  ||||||||||||||||||||    
T  50724388 ggacaatgcattattatatgcaggggttggggttcgaacctcggacaccccacttattcac 50724448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 50788460 - 50788400
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||||||||| ||  |||||||  ||||||||||||||||||||    
T  50788460 ggacaatgcattattatatgcaggggttggggttcgaacctcggacaccccacttattcac 50788400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 41121883 - 41121946
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||| |||||||||||| |||||||||||| ||||||  ||| ||| |||||||||||||||    
T  41121883 cagttggtaggacaatgcattattatatgcagaggtcggggttcaaaccccggacaccccactt 41121946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 42665982 - 42665939
Alignment:
Q  68 atgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||| ||||||| |||||||||||||||||||||    
T  42665982 atgcaggggtcggagttcgaactccggacaccccacttattcac 42665939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 7448447 - 7448377
Alignment:
Q  42 cagttgatagg-acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||| |||||||| ||||||||||||||| |||  ||||||| || || |||||||||||||||    
T  7448447 cagttgatagggacaatgcattattatatgcaggggccgggattcgaaccccagataccccacttattcac 7448377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 7456589 - 7456519
Alignment:
Q  42 cagttgatagg-acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||| |||||||| ||||||||||||||| |||  ||||||| || || |||||||||||||||    
T  7456589 cagttgatagggacaatgcattattatatgcaggggccgggattcgaaccccagataccccacttattcac 7456519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 32665300 - 32665362
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||| ||||||||||| |||||||  ||| ||| |||||||||||||||||||||    
T  32665300 taggataatgcattattatatgcaagggtcggggttcaaactccggacaccccacttattcac 32665362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 47062149 - 47062084
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||| |||||||||||| ||||||||| | |||||||| ||||||| |||||||||||| |||||    
T  47062149 cagttggtaggacaatgcattattatatg-atgggtcggagttcgaaccccggacaccccatttatt 47062084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 4072808 - 4072747
Alignment:
Q  50 aggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||| | ||||||||||||| |||||| |||||||  |||||||||| |||||||||    
T  4072808 aggacaatgtattattatatgcaggagtcggagttcgaacttcggacacccctcttattcac 4072747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 15498225 - 15498286
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||| ||||||||| ||||| |||| ||||||| |||||||  |||||||||||    
T  15498225 taggacaatgcattattatatgtaggggccggagttcgaaccccggacattccacttattca 15498286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 27066642 - 27066691
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||| |  ||||||| |||||||||||||||||||||    
T  27066642 tattatatgcaggggtcagggttcgaaccccggacaccccacttattcac 27066691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 38176066 - 38176135
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||| |||| |||  ||||||| || |||| |||||||||||||    
T  38176066 cagttggtaggacaatgcaatattatatgctggggccggggttcgaaccccagacagcccacttattcac 38176135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 46754563 - 46754600
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacacc 99  Q
    |||||||||||||||||||||||||||| |||||||||    
T  46754563 tattatatgcaggggtcggatttcgaaccccggacacc 46754600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 48173298 - 48173367
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| || ||||||||| ||||||||| | |||| ||| ||||||| ||||||||| |||||||||||    
T  48173298 cagttggtaagacaatgcattattatatgtatgggttggagttcgaaccccggacacctcacttattcac 48173367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 335112 - 335044
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||||| ||||||||| | ||  |||| ||||||| | |||||||||||||||||||    
T  335112 agttggtaggacaatgcattattatatgtaaggaccggagttcgaaccctggacaccccacttattcac 335044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 3784091 - 3784143
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccac 103  Q
    |||||||||| |||||||| ||||||||||  ||||||| |||||||||||||    
T  3784091 ggacaatgcattattatatacaggggtcggggttcgaaccccggacaccccac 3784143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 10959154 - 10959214
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||  ||||| |||  ||||||| |||||||||||||||||||||    
T  10959154 ggacaatgcattattatatataggggccggggttcgaaccccggacaccccacttattcac 10959214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 35477752 - 35477812
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||| ||||||||  ||| |||||| ||||||| |||||||||||||||||||||    
T  35477752 ggacattgcattattatatttaggtgtcggagttcgaactccggacaccccacttattcac 35477812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 36727545 - 36727478
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| |||||||||||  ||||||  |||||||  |||||||||||||||||||    
T  36727545 cagttggtaggacaatgcattattatatgca-aggtcggggttcgaacctcggacaccccacttattca 36727478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 37279640 - 37279708
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||| ||||| || |||||||||||| ||| ||  ||||||| || ||||||||||||||||||    
T  37279640 agttgatagaacaatacattattatatgcagaggttggggttcgaactccagacaccccacttattcac 37279708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 52030142 - 52030202
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||| | ||||||||||||||| |||  ||||||| |||||||||| ||||||||||    
T  52030142 ggacaatgtattattatatgcaggggccggggttcgaaccccggacaccctacttattcac 52030202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 53870859 - 53870915
Alignment:
Q  55 aatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||| |||||||||| ||||| || |||| |||||||||||||||||||||    
T  53870859 aatgcattatgatatgcagggatcggaattagaactccggacaccccacttattcac 53870915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 55195944 - 55195876
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||||||||||| ||| ||||| |||||| ||| ||||||| ||| ||||| || |||||||    
T  55195944 cagttgataggacaatgcattatcatatgtaggggttggagttcgaactccgaacacctcatttattca 55195876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 3955327 - 3955389
Alignment:
Q  51 ggacaatgcagtattatatgcaggggt--cggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||||||||   |||  ||||||| |||||||||||||||||||||    
T  3955327 ggacaatgcattattatatgcaggggggccggggttcgaaccccggacaccccacttattcac 3955389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 6951859 - 6951805
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| ||||||||||||||||||||||| ||||  |||||||| |||||||||||    
T  6951859 atgcattattatatgcaggggtcggattt-gaacctcggacaccgcacttattcac 6951805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 17440046 - 17439979
Alignment:
Q  44 gttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||| |||||||||||| ||||||||||||||| |||  || ||||  |||| |||||||||||||||    
T  17440046 gttggtaggacaatgcattattatatgcaggggccggtgtttgaacctcggataccccacttattcac 17439979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 24160589 - 24160542
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||  ||||||| |||||||| ||||||||||||    
T  24160589 ttatatgcaggggtcggggttcgaaccccggacactccacttattcac 24160542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 24537861 - 24537908
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  24537861 ttatatgcaggggccggggttcgaaccccggacaccccacttattcac 24537908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 27739795 - 27739854
Alignment:
Q  52 gacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||| ||||||||| ||||| |||| || |||| |||||||||||| ||||||||    
T  27739795 gacaatgcattattatatgtaggggccggagtttgaaccccggacaccccatttattcac 27739854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 28951892 - 28951947
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| ||||||||||||||||| |  ||||||| ||| |||||||||||||||||    
T  28951892 atgcattattatatgcaggggtcagggttcgaaccccgaacaccccacttattcac 28951947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 31586982 - 31587025
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||||| ||||||  |||||||||||||||    
T  31586982 tattatatgcaggggtcggagttcgaatcccggacaccccactt 31587025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 31902266 - 31902219
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||| |||||||||  ||||||| |||||||||||||||||||||    
T  31902266 ttatatgtaggggtcggggttcgaactccggacaccccacttattcac 31902219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 40786292 - 40786359
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattc 109  Q
    |||||| |||||||||||| ||||||||||| |||||||  |||||||  | ||| ||||||||||||    
T  40786292 cagttggtaggacaatgcattattatatgcatgggtcggggttcgaacctcagacgccccacttattc 40786359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 46328985 - 46328938
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  46328985 ttatatgcaggggccggggttcgaaccccggacaccccacttattcac 46328938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 51017824 - 51017870
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  51017824 ttatatgcaggagtcggagttcgaac-ccggacaccccacttattcac 51017870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 4478437 - 4478383
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||| |||||||||||||||||||  ||||||  ||||||| ||||||||||||    
T  4478437 atgcattattatatgcaggggtcggggttcgaatcccggacatcccacttattca 4478383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 9167343 - 9167285
Alignment:
Q  53 acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| | |||||||||||||||||||  |||||||  ||||||||||| ||||||||    
T  9167343 acaatgtattattatatgcaggggtcggggttcgaacttcggacaccccagttattcac 9167285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 20623853 - 20623791
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||| |||| || |  ||||||| | |||||||||||||||||||    
T  20623853 taggacaatgcattattatatgtagggatcagggttcgaactcaggacaccccacttattcac 20623791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 21420272 - 21420206
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||| |||||||||||| |||||||||||| |||||   ||||||  | ||||||||||||||||    
T  21420272 cagttggtaggacaatgcattattatatgcagcggtcgaggttcgaatcctggacaccccacttatt 21420206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 28226259 - 28226201
Alignment:
Q  53 acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||| |||||||||||||||| ||  ||||||  ||| |||||||||||||||||    
T  28226259 acaatgcattattatatgcaggggttggggttcgaatcccgaacaccccacttattcac 28226201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 33072302 - 33072336
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcagggg 76  Q
    ||||||||||||||||||| |||||||||||||||    
T  33072302 cagttgataggacaatgcattattatatgcagggg 33072336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 34407159 - 34407105
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||| |||||||||||||||| ||  ||||||| || |||||||||||||||||    
T  34407159 atgcattattatatgcaggggttggggttcgaaccccagacaccccacttattca 34407105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 39492833 - 39492899
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||| |||||||||||| ||||||||||| |||  ||  ||||||| || |||||||||||||||    
T  39492833 cagttgttaggacaatgcattattatatgcatgggctggggttcgaaccccagacaccccacttatt 39492899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 45431658 - 45431708
Alignment:
Q  61 gtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||||| |  ||||||| |||||||||||||||||||||    
T  45431658 gtattttatgcaggggtcagggttcgaaccccggacaccccacttattcac 45431708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 54983765 - 54983719
Alignment:
Q  65 tatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||  ||||||| |||||||||||| ||||||||    
T  54983765 tatatgcaggggtcggggttcgaaccccggacaccccatttattcac 54983719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 16006589 - 16006520
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||| |||||||| ||| ||||||| | |||||  ||||||| || ||||||||||||||||||    
T  16006589 cagttggtagaacaatgcattataatatgcaagagtcggggttcgaaccccagacaccccacttattcac 16006520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 20244146 - 20244199
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccgga 95  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| |||||    
T  20244146 cagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccgga 20244199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 32876199 - 32876162
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcg 79  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  32876199 cagttggtaggacaatgcattattatatgcaggggtcg 32876162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 38682334 - 38682273
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||| || |||||||||||||||||||  ||||||  ||||||||||  ||||||||    
T  38682334 taggacaatacattattatatgcaggggtcgggattcgaatcccggacaccctccttattca 38682273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 50381749 - 50381794
Alignment:
Q  65 tatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||||||||  ||||||  ||||||||||||||||||||    
T  50381749 tatatgcaggggtcggggttcgaatcccggacaccccacttattca 50381794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 4e-19; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 19793538 - 19793607
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  19793538 cagttggtaggacaatgcattattatatgcaggggccggaattcgaaccccggacaccccacttattcac 19793607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 15774395 - 15774326
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||| |||||||||  ||||||| |||||||||||||||||||||    
T  15774395 cagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttattcac 15774326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 38021272 - 38021333
Alignment:
Q  50 aggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  38021272 aggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcac 38021333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 49251478 - 49251409
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||| || ||||||||||||||||||    
T  49251478 cagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattcac 49251409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 15368817 - 15368885
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| ||||||||||||||||||||    
T  15368817 cagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattca 15368885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 29491491 - 29491551
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  29491491 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcac 29491551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 538412 - 538343
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||| |||||||| ||||||||||||||| |||| ||||||| ||| |||||||||||||||||    
T  538412 cagttggtagaacaatgcattattatatgcaggggccggagttcgaaccccgaacaccccacttattcac 538343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 4354188 - 4354119
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||  |||||||  ||||||||||||||||||||    
T  4354188 cagttggtaggacaatgcattattatatgcaggggccggggttcgaacttcggacaccccacttattcac 4354119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 23464069 - 23464000
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| ||||||||||||||| |||||    
T  23464069 cagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttgttcac 23464000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 37733767 - 37733836
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||| || |||  ||||||| |||||||||||||||||||||    
T  37733767 cagttggtaggacaatgcattattatatgcagtggacggggttcgaaccccggacaccccacttattcac 37733836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 11405477 - 11405537
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| | |||||||||||||||||  ||||||| |||||||||||||||||||||    
T  11405477 ggacaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcac 11405537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 17350082 - 17350142
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  17350082 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 17350142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 49606781 - 49606713
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| ||||||||| ||||| |||| |||||||  |||||||||||||||||||    
T  49606781 cagttgttaggacaatgcattattatatgtaggggccggagttcgaacttcggacaccccacttattca 49606713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 23930627 - 23930561
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||| | |||||||||| |||||    
T  23930627 cagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccctggacaccccatttatt 23930561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 38020031 - 38019961
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcg-aacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||| |||| ||| || ||||||||||||||||||    
T  38020031 cagttggtaggacaatgcattattatatgcaggggccggagttcgaaaccccagacaccccacttattcac 38019961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 9408697 - 9408632
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttat 107  Q
    |||||| |||||||||||| ||||| |||||||||||||| ||||||  ||||||| |||||||||    
T  9408697 cagttggtaggacaatgcattattaaatgcaggggtcggagttcgaatcccggacaacccacttat 9408632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 19424078 - 19424127
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  19424078 tattatatgcaggggtcggggttcgaaccccggacaccccacttattcac 19424127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 30649105 - 30649174
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||| ||| ||||||||||||| || ||  ||||||| || ||||||||||||||||||    
T  30649105 cagttgataggacaacgcattattatatgcaggagttggggttcgaaccccagacaccccacttattcac 30649174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 24014691 - 24014623
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| || ||||||||| ||||||||||||||| |||| ||||||| | |||||||||| |||||||    
T  24014691 cagttggtaagacaatgcattattatatgcaggggccggagttcgaactctggacaccccaattattca 24014623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 39238737 - 39238797
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| ||   ||||||| |||||||||||||||||||||    
T  39238737 ggacaatgcattattatatgcaggggccgaggttcgaaccccggacaccccacttattcac 39238797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 40678844 - 40678904
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||| | |||||||||||||||||||||    
T  40678844 ggacaatgcattattatatgcaggggccggggttcgatccccggacaccccacttattcac 40678904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 47763459 - 47763399
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||| |||||||  |||||| |||||||||||||    
T  47763459 ggacaatgcattattatatgcaggggccggagttcgaacctcggacatcccacttattcac 47763399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 48110541 - 48110609
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| ||| |||||||| |||||||||||||||| ||| |||||||  |||||||| ||||||||||    
T  48110541 cagttggtagaacaatgcattattatatgcaggggttggagttcgaacctcggacacctcacttattca 48110609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 9768870 - 9768823
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||||    
T  9768870 ttatatgcaggggtcggggttcgaaccccggacaccccacttattcac 9768823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 17056961 - 17056894
Alignment:
Q  44 gttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||| |||||||||||| ||||||||||||||| |||  ||||||| || ||| ||||||||||||||    
T  17056961 gttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacgccccacttattcac 17056894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 3533049 - 3532988
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||| |||||||||  ||| ||| |||||||||||||||||||||    
T  3533049 taggacaatgcattattatatgtaggggtcgg-gttccaaccccggacaccccacttattcac 3532988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 11238097 - 11238043
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||| |||||||||||||||||||  ||||||  ||||||||||||||||||||    
T  11238097 atgcattattatatgcaggggtcggggttcgaatcccggacaccccacttattca 11238043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 21884594 - 21884656
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||||||||| ||   ||||||| || ||||||||||||||||||    
T  21884594 taggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcac 21884656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 27745176 - 27745238
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||| |||||||||||||| ||||  ||||||| |||||||||||| ||||||||    
T  27745176 taggaaaatgcattattatatgcagggatcggggttcgaaccccggacaccccatttattcac 27745238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 43555957 - 43555891
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||| |||||||||||| |||||||||||||| ||||  ||| ||| | ||||||||||||||||    
T  43555957 cagttggtaggacaatgcattattatatgcagggatcggggttcaaacccaggacaccccacttatt 43555891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 48260257 - 48260203
Alignment:
Q  57 tgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||| |||||||||  ||||||||| ||||||| |||||||||||||||||||||    
T  48260257 tgcattattatatgtcggggtcggagttcgaaccccggacaccccacttattcac 48260203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 1721152 - 1721221
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||  ||||| | ||||||||||||| ||| |||||||| ||||||||| |||||||||||    
T  1721152 cagttggtaggaacatgcattgttatatgcaggggccgggtttcgaaccccggacacctcacttattcac 1721221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 8364491 - 8364422
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||||| ||||||||| | |||||||| ||||||| ||| || ||||||||||||||    
T  8364491 cagttggtaggaaaatgcattattatatgtatgggtcggagttcgaaccccgaacgccccacttattcac 8364422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 17871162 - 17871096
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||||||||||| ||||||||||||||  |||  ||||||| ||| |||||| |||||||||    
T  17871162 cagttgataggacaatgcattattatatgcaggg--cggggttcgaaccccgaacaccctacttattca 17871096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 18923968 - 18923899
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||| || |  |||||||  |||||||||||| |||||||    
T  18923968 cagttggtaggacaatgcattattatatgcagggttcagggttcgaacctcggacaccccacgtattcac 18923899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 24662001 - 24662062
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||| ||||||||||||||||| |  ||||||| || ||||||||| |||||||    
T  24662001 taggacaatgcattattatatgcaggggtcaggattcgaaccccagacaccccatttattca 24662062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 29936737 - 29936696
Alignment:
Q  69 tgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  29936737 tgcaggggtcggagttcgaactccggacaccccacttattca 29936696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 41677092 - 41677141
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||  ||||||| |||||||||||||||||||||    
T  41677092 tattatatgcgggggtcggggttcgaactccggacaccccacttattcac 41677141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 42831959 - 42832028
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||||| |||| |||||||||||||||  ||  ||| ||| |||||||||||||||||||||    
T  42831959 cagttggtaggacattgcattattatatgcaggggctggggttcaaaccccggacaccccacttattcac 42832028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 43237792 - 43237853
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||| ||||||||||||||||| || |||||||  | ||||||||| |||||||    
T  43237792 taggacaatgcattattatatgcaggggtcagagttcgaaccacagacaccccagttattca 43237853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 2052756 - 2052700
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttat 107  Q
    |||||||||| ||| ||||||||||| |||  ||||||| |||||||||||||||||    
T  2052756 ggacaatgcattatcatatgcaggggccggggttcgaaccccggacaccccacttat 2052700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 13870155 - 13870095
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  || |||  |||||||||||||||||||||    
T  13870155 ggacaatgcattattatatgcaggggccggggtttgaatcccggacaccccacttattcac 13870095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 37490902 - 37490970
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||| ||||||||||||||| |||  | |||||  |||||||||| ||||||||    
T  37490902 cagttggtaggacaatgcattattatatgcaggggccggggtacgaaccacggacaccccgcttattca 37490970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 46116256 - 46116188
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||||| ||| |||||||||||  ||  ||||||| |||||||||||| ||||||||    
T  46116256 agttggtaggacaatgcattatcatatgcaggggctggggttcgaaccccggacaccccaattattcac 46116188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 52833180 - 52833120
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| ||||||| |||| ||||||||    
T  52833180 ggacaatgcattattatatgcaggggccggggttcgaaccccggacatcccatttattcac 52833120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 3341805 - 3341750
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| ||||||||||||||| |||   |||||| |||||||||||||||||||||    
T  3341805 atgcattattatatgcaggggccggggatcgaaccccggacaccccacttattcac 3341750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 77
Target Start/End: Complemental strand, 5172685 - 5172650
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggt 77  Q
    ||||||||||||||||||| ||||||||||||||||    
T  5172685 cagttgataggacaatgcattattatatgcaggggt 5172650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 7180649 - 7180606
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    ||||||||||||||| |||| ||||||| |||||||||||||||    
T  7180649 tattatatgcaggggccggagttcgaaccccggacaccccactt 7180606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 9527447 - 9527506
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||| | |||||||||||||||||  || |||| | ||||||||||||||||||    
T  9527447 ggacaatgcattgttatatgcaggggtcggggtttgaaccctggacaccccacttattca 9527506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 77
Target Start/End: Complemental strand, 16110103 - 16110068
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggt 77  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16110103 cagttgataggacaatgcattattatatgcaggggt 16110068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 41182808 - 41182855
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||  || |||| |||||||||||||||||||||    
T  41182808 ttatatgcaggggtcggggtttgaaccccggacaccccacttattcac 41182855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 42490445 - 42490402
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||||  ||||||| |||||||||||||||    
T  42490445 tattatatgcaggggtcggggttcgaaccccggacaccccactt 42490402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 50119007 - 50119050
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||    
T  50119007 tattttatgcaggggtcggagttcgaaccccggacaccccactt 50119050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 50199537 - 50199490
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  50199537 ttatatgcaggggccggggttcgaaccccggacaccccacttattcac 50199490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 11802103 - 11802033
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcacg 112  Q
    |||||| |||||||||||| ||||||||| |||||| ||  ||||||| ||||||||  || |||||||||    
T  11802103 cagttggtaggacaatgcattattatatgtaggggttggggttcgaaccccggacacttcatttattcacg 11802033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 18309567 - 18309629
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||||||||||||| ||| || |||  ||||||| || ||||||||||    
T  18309567 taggacaatgcattattatatgcaggggttggagttagaatcccggacatcctacttattcac 18309629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 32635175 - 32635221
Alignment:
Q  65 tatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||| ||  ||||||| |||||||||||||||||||||    
T  32635175 tatatgcaggggttggggttcgaaccccggacaccccacttattcac 32635221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 35111661 - 35111730
Alignment:
Q  42 cagttgatagga-caatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||| ||||||||||||||| |||  ||||||| ||  |||||||||||||||||    
T  35111661 cagttgataggaacaatgcattattatatgcagggg-cggggttcgaacccctaacaccccacttattcac 35111730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 6014599 - 6014532
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||| ||  | ||||||  |||||||||||||||||||||    
T  6014599 cagttggtaggacaatgca-tattatatgcagggatca-agttcgaattccggacaccccacttattcac 6014532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 14262781 - 14262736
Alignment:
Q  65 tatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||||||||  ||||||| |||||||||| |||||||||    
T  14262781 tatatgcaggggtcggggttcgaaccccggacaccctacttattca 14262736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 15051559 - 15051628
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||| |||||||| ||||||||||| |||||||  ||  ||| | |||||||||||||||||||    
T  15051559 cagttggtagaacaatgcattattatatgcaagggtcggggtttaaactctggacaccccacttattcac 15051628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 17889073 - 17889142
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||| | |||||||||||||  ||||  ||||||| ||||||| |||||||||||||    
T  17889073 cagttggtaggataatgtattattatatgcaggaatcggggttcgaactccggacatcccacttattcac 17889142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 24636736 - 24636805
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| || |||||| || ||||||||| ||| | |||| ||||||| ||||||||| |||||||||||    
T  24636736 cagttggtatgacaatacattattatatgtaggagccggagttcgaactccggacacctcacttattcac 24636805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 29106939 - 29106882
Alignment:
Q  55 aatgcagtattatatgcaggggtcggat-ttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||||||||||||| | ||| ||| |||||||||||||||| ||||||||    
T  29106939 aatgcattattatatgcagggggccgatgttcaaacgccggacaccccatttattcac 29106882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 39433370 - 39433439
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| || || |||||| ||||||||||||||| ||   |||||||  ||||||||||||||||||||    
T  39433370 cagttggtatgaaaatgcattattatatgcaggggccgatgttcgaacctcggacaccccacttattcac 39433439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 40814839 - 40814790
Alignment:
Q  52 gacaatgcagtattatatgcaggggtcggatttcgaacgccggacacccc 101  Q
    ||||||||| |||||||||||||||||||  ||||||  |||||||||||    
T  40814839 gacaatgcattattatatgcaggggtcggggttcgaaacccggacacccc 40814790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 42908805 - 42908850
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattc 109  Q
    |||||||||||||||||  ||||||| ||||| |||||||||||||    
T  42908805 ttatatgcaggggtcggggttcgaactccggataccccacttattc 42908850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 43837484 - 43837415
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||||| | || ||||||||||||||  ||||||| | |||||||||| ||||||||    
T  43837484 cagttggtaggaaaatgcattcttctatgcaggggtcggggttcgaaccctggacaccccatttattcac 43837415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 49916459 - 49916520
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||| ||||||||| |||||||||  ||||||  ||||||| |||| |||||||    
T  49916459 taggacaatgcattattatatgtaggggtcggggttcgaatcccggacatcccatttattca 49916520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 46; Significance: 9e-17; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 4335 - 4404
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||| || |||||||||||||||||||  ||||||| |||||||| ||||||||||||    
T  4335 cagttgataggacaatacattattatatgcaggggtcggggttcgaaccccggacactccacttattcac 4404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 16078 - 16146
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||||| ||||||| || ||||||||||    
T  16078 agttgataggacaatgcattattatatgcagggatcggagttcgaaccccggacatcctacttattcac 16146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 9e-17; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 2366369 - 2366438
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||| |  ||||||||||||||||||    
T  2366369 cagttgataggacaatgcattattatatgcaggggtcggggttcgaactctagacaccccacttattcac 2366438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 23685637 - 23685568
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||||| ||||||||||||||| |||  ||||||| || ||||||||||||||||||    
T  23685637 cagttgataggacaatgcattattatatgcaggggccggggttcgaaccccagacaccccacttattcac 23685568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 21086116 - 21086185
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||| ||| | ||||||| |||||||||| ||||||||||    
T  21086116 cagttggtaggacaatgcattattatatgcagggatcgaagttcgaactccggacacccaacttattcac 21086185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 24396965 - 24397026
Alignment:
Q  50 aggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||| |||||||||||||||||||| ||||||| | |||||||| ||||||||||    
T  24396965 aggacaatgcattattatatgcaggggtcggagttcgaaccctggacaccctacttattcac 24397026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 30644181 - 30644250
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| || ||||||||||||||||||    
T  30644181 cagttggtaggacaatgcattattatatgcaggggccggtgttcgaaccccagacaccccacttattcac 30644250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 32814853 - 32814907
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||| |||||||||||||||||||| ||||||  ||||||||||||||||||||    
T  32814853 atgcattattatatgcaggggtcggagttcgaatcccggacaccccacttattca 32814907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 44437901 - 44437843
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttat 107  Q
    |||||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||    
T  44437901 taggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttat 44437843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 25711214 - 25711145
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||| ||||||||| ||||| |||  |||||||  ||||||||||||||||||||    
T  25711214 cagttgataggataatgcattattatatgtaggggccggggttcgaacctcggacaccccacttattcac 25711145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 27047798 - 27047729
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||  |||||||  ||||||||||| ||||||||    
T  27047798 cagttggtaggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccatttattcac 27047729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 30152753 - 30152822
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||  |||||||||  ||||||| ||| |||||||||||||||||    
T  30152753 cagttggtaggacaatgcattattatatataggggtcggggttcgaaccccgaacaccccacttattcac 30152822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 36316057 - 36315988
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||||| ||||||||||||||| |||  |||||||  ||||||||||||||||||||    
T  36316057 cagttggtaggataatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattcac 36315988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 38792224 - 38792293
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| || ||||||||| ||||||||||||||||| || || |||| |||||||||| ||||||||||    
T  38792224 cagttggtaagacaatgcattattatatgcaggggtcagagtttgaaccccggacaccctacttattcac 38792293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 47552225 - 47552294
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||| ||| |||  ||||||| |||||||||| ||||||||||    
T  47552225 cagttggtaggacaatgcattattatatgcaagggccggggttcgaaccccggacaccctacttattcac 47552294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 21285427 - 21285367
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| | ||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  21285427 ggacaatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcac 21285367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 4042338 - 4042283
Alignment:
Q  55 aatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||||||||||||| |||||||  ||||||||| |||||||||    
T  4042338 aatgcattattatatgcaggggtcggagttcgaacttcggacacccaacttattca 4042283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 11808072 - 11808119
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||||    
T  11808072 ttatatgcaggggtcggggttcgaaccccggacaccccacttattcac 11808119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 29658345 - 29658286
Alignment:
Q  52 gacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||| | ||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  29658345 gacaatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcac 29658286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 2261560 - 2261498
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||||||||| |||  ||||||  |||||||||| ||||||||||    
T  2261560 taggacaatgcattattatatgcaggggccggggttcgaatcccggacacccaacttattcac 2261498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 17900961 - 17900895
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattc 109  Q
    ||||| |||||||||||| ||||||||||||||| |||   |||||| |||||| ||||||||||||    
T  17900961 agttggtaggacaatgcattattatatgcaggggccggggctcgaaccccggactccccacttattc 17900895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 22966034 - 22965972
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||||||||| ||   ||||||| || ||||||||||||||||||    
T  22966034 taggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcac 22965972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 24304355 - 24304297
Alignment:
Q  53 acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||| |||||||||||||||||||  ||||||| ||| |||||||| ||||||||    
T  24304355 acaatgcattattatatgcaggggtcggggttcgaactccgaacaccccatttattcac 24304297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 46337951 - 46337881
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggaca-ccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||| ||||  ||||||| | ||||| ||||||||||||||    
T  46337951 cagttggtaggacaatgcattattatatgcagggatcggggttcgaaccctggacacccccacttattcac 46337881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 46716345 - 46716411
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||| |||||||||||| |||||||||||| ||||||  ||||||| | | ||||||||||||||    
T  46716345 cagttggtaggacaatgcattattatatgcagaggtcggggttcgaaccctgaacaccccacttatt 46716411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 25818298 - 25818367
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| |||||| |||||||||||||||  ||| ||||||| ||| |||| ||||||||||||    
T  25818298 cagttggtaggataatgcattattatatgcaggggctggagttcgaaccccgaacactccacttattcac 25818367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 31694091 - 31694148
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||||||| ||||||||||||||| ||   ||||||| ||||||||||||||||||    
T  31694091 ggacaatgcattattatatgcaggggacgagattcgaactccggacaccccacttatt 31694148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 34948118 - 34948187
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||| |||||||| || ||   ||||||| |||||||||||||||||||||    
T  34948118 cagttggtaggacaatgcattatcatatgcagtggccgaggttcgaaccccggacaccccacttattcac 34948187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 20527503 - 20527443
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| | ||||||||||||| |||| ||||||| ||| ||||| |||||||||||    
T  20527503 ggacaatgcattgttatatgcaggggccggagttcgaaccccgaacacctcacttattcac 20527443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 34234322 - 34234362
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatt 83  Q
    |||||||||||||||||||||||||||| ||||| ||||||    
T  34234322 agttgataggacaatgcagtattatatgtaggggacggatt 34234362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 38451884 - 38451944
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| | ||||||||||||| |||  ||||||  |||||||||||||||||||||    
T  38451884 ggacaatgcattgttatatgcaggggccggggttcgaatcccggacaccccacttattcac 38451944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 41139108 - 41139168
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||||||||||||  ||||||  ||||||||  |||||||||||    
T  41139108 ggacaatgcattattatatgcaggggtcggggttcgaatcccggacacttcacttattcac 41139168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 41417337 - 41417289
Alignment:
Q  63 attatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||||||  ||||||| || ||||||||||||||||||    
T  41417337 attatatgcaggggtcggggttcgaaccccagacaccccacttattcac 41417289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 48525599 - 48525658
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||||||||| ||  ||||||| ||||||||| |||||||||||    
T  48525599 ggacaatgca-tattatatgcaggggttggggttcgaaccccggacacctcacttattcac 48525658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 9712233 - 9712190
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||||  ||||||| |||||||||||||||    
T  9712233 tattatatgcaggggtcggggttcgaaccccggacaccccactt 9712190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 14102487 - 14102542
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| ||||||||||||||| |||  || |||| |||||||||||||||||||||    
T  14102487 atgcattattatatgcaggggccggggtttgaaccccggacaccccacttattcac 14102542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 14412504 - 14412559
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| ||||||||||||||| |||  || |||| |||||||||||||||||||||    
T  14412504 atgcattattatatgcaggggccggggtttgaaccccggacaccccacttattcac 14412559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 14707326 - 14707373
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||| ||  ||||||| |||||||||||||||||||||    
T  14707326 ttatatgcaggggttggggttcgaaccccggacaccccacttattcac 14707373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 21875663 - 21875620
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||    
T  21875663 tattatatgcaggggtcggagttcgaaccccggacactccactt 21875620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 30806150 - 30806193
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||    
T  30806150 tattatatgcaggggtcggagttcgaaccccggacatcccactt 30806193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 43635622 - 43635669
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||  ||||||| |||||||||||||||||||||    
T  43635622 ttatatgcagcggtcggggttcgaaccccggacaccccacttattcac 43635669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 5787480 - 5787542
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||||||||| |||  || |||| ||  |||||||||||||||||    
T  5787480 taggacaatgcattattatatgcaggggccggggtttgaaccccaaacaccccacttattcac 5787542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 7465492 - 7465542
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccactta 106  Q
    ||||| ||||||||||||||| |||  ||||||| ||||||||||||||||    
T  7465492 atgcattattatatgcaggggccggggttcgaaccccggacaccccactta 7465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 15716721 - 15716671
Alignment:
Q  61 gtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||||  |||||||  ||||||||||||||||||||    
T  15716721 gtattatatgcaagggtcggggttcgaacttcggacaccccacttattcac 15716671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 29779000 - 29779062
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||| |||||||||||||||||||| ||||||| ||| | ||  |||||||||||    
T  29779000 taggataatgcattattatatgcaggggtcggagttcgaactccgaatacttcacttattcac 29779062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 38778762 - 38778696
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||| |||||||||||| ||||||||||||||| ||   ||| ||| ||||||| ||||||||||    
T  38778762 cagttggtaggacaatgcattattatatgcaggggccgaggttctaaccccggacatcccacttatt 38778696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 8724392 - 8724461
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||| ||| || |||||||||||| ||||||   ||||||  ||||||||||||||||||||    
T  8724392 cagttggtaggataatacattattatatgcagaggtcgggaatcgaacctcggacaccccacttattcac 8724461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 9351066 - 9351115
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||||| ||||||| ||| | || ||||||||||||    
T  9351066 tattatatgcaggggtcggagttcgaaccccgaaaactccacttattcac 9351115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 22706111 - 22706042
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||| | |||||||||||||||  |   ||| ||| |||||||||||||||||||||    
T  22706111 cagttggtaggacaatgtattattatatgcaggggctgaggttcaaactccggacaccccacttattcac 22706042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 23799334 - 23799379
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattc 109  Q
    |||||||||||||||||  |||||||  ||||||||||||||||||    
T  23799334 ttatatgcaggggtcgggattcgaacctcggacaccccacttattc 23799379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 31793507 - 31793548
Alignment:
Q  69 tgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||||  ||||||| ||||||||||||||||||||    
T  31793507 tgcaggggtcggggttcgaaccccggacaccccacttattca 31793548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 38025356 - 38025421
Alignment:
Q  45 ttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||||||| ||||||||||||| || ||  |||||||  ||||||  |||||||||||    
T  38025356 ttgataggacaatgcattattatatgcaggagttggggttcgaacctcggacattccacttattca 38025421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 47880178 - 47880227
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||| |||  ||||||  |||||||||||||||||||||    
T  47880178 tattatatgcaggggccggggttcgaatcccggacaccccacttattcac 47880227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 48174993 - 48175046
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattc 109  Q
    ||||| |||||||| |||||| |||  ||||||| |||||||||||||||||||    
T  48174993 atgcattattatatacaggggccggtgttcgaaccccggacaccccacttattc 48175046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 9e-17; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 18872533 - 18872602
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||| ||| |||||||||||||||||    
T  18872533 cagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttattcac 18872602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 29096391 - 29096322
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||| ||| |||| ||||||| |||||||||||||||||||||    
T  29096391 cagttggtaggacaatgcattattatatgcaagggccggagttcgaaccccggacaccccacttattcac 29096322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 42455477 - 42455408
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||| ||||||| |||||||| ||||||||||||    
T  42455477 cagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacactccacttattcac 42455408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 4674889 - 4674829
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  4674889 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcac 4674829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 36045206 - 36045148
Alignment:
Q  53 acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  36045206 acaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcac 36045148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 33800905 - 33800974
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||| || ||||||||||||||||||    
T  33800905 cagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccccacttattcac 33800974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 1463892 - 1463952
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  1463892 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 1463952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 2029210 - 2029142
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||| | |||||||||||||||||||  ||||||| ||| |||||||||||||||||    
T  2029210 agttggtaggacaatgtattattatatgcaggggtcgggattcgaaccccgaacaccccacttattcac 2029142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 2411377 - 2411309
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| |||||||||| | ||||||||||||||| |||| ||||||| || |||||||||||||||||    
T  2411377 cagttggtaggacaatgtattattatatgcaggggccggagttcgaaccccagacaccccacttattca 2411309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 23925555 - 23925623
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||||||||||| ||||||||||||||||| |  ||||||  ||||| ||||||||||||||    
T  23925555 cagttgataggacaatgcattattatatgcaggggtctgggttcgaatcccggataccccacttattca 23925623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 31556852 - 31556899
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  31556852 ttatatgcaggggtcggagttcgaaccccggacaccccacttattcac 31556899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 20945967 - 20945905
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||||||||| |||  ||||||  |||||||||||||||||||||    
T  20945967 taggacaatgcattattatatgcaggggccggggttcgaaatccggacaccccacttattcac 20945905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 29144154 - 29144224
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcacg 112  Q
    |||||| |||||||||||| |||||||||||||||||||  || |||| || ||||||||| |||||||||    
T  29144154 cagttggtaggacaatgcattattatatgcaggggtcggggtttgaactccagacaccccatttattcacg 29144224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 32158490 - 32158428
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||||||||| |||  ||||||| ||| |||||||||||||||||    
T  32158490 taggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttattcac 32158428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 843451 - 843382
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| || ||||||||| ||||||||| ||||| |||  ||||||| |||||||||||||||||||||    
T  843451 cagttggtatgacaatgcattattatatgtaggggacggggttcgaaccccggacaccccacttattcac 843382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 1244810 - 1244741
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||| ||| ||||||||||||||||| |  ||||||| || ||||||||||||||||||    
T  1244810 cagttggtaggacaaagcattattatatgcaggggtcagggttcgaaccccagacaccccacttattcac 1244741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 10943740 - 10943797
Alignment:
Q  54 caatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  10943740 caatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 10943797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 18478015 - 18478084
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||| |||| |||  ||||||| | |||||||||||||||||||    
T  18478015 cagttggtaggacaatgcattattatatgctggggccggggttcgaaccctggacaccccacttattcac 18478084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 19059087 - 19059018
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||| ||||||||||| |||  ||||||| | |||||||||||||||||||    
T  19059087 cagttggtaggacaatgcattatcatatgcaggggccggggttcgaaccctggacaccccacttattcac 19059018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 19608625 - 19608694
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||  ||||| |||||||||||||||||||  ||||||| ||||||||  |||||||||||    
T  19608625 cagttgataggaatatgcattattatatgcaggggtcggggttcgaactccggacacttcacttattcac 19608694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 22600018 - 22599950
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||| | |||||| |||| || ||||||||||||||||||    
T  22600018 cagttggtaggacaatgcattattatatgcagggttgggattt-gaaccccagacaccccacttattcac 22599950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 30403762 - 30403831
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| ||||||||| || |||||||| |||||| |||| || |||| |||||||||||||||||||||    
T  30403762 cagttggtaggacaatacattattatatacaggggccggagtttgaaccccggacaccccacttattcac 30403831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 6447554 - 6447494
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  |||||||  ||||||||||||||||||||    
T  6447554 ggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattcac 6447494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 13754018 - 13754086
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| ||||||||| || ||||||||||||||||||   |||||||| ||||||||||| |||||||    
T  13754018 cagttggtaggacaatacattattatatgcaggggtcgatgttcgaacgtcggacaccccatttattca 13754086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 26169095 - 26169039
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacac 98  Q
    |||||| |||||||||||| |||||||||||||||| ||| ||||||| ||||||||    
T  26169095 cagttggtaggacaatgcattattatatgcaggggttggagttcgaaccccggacac 26169039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 37303955 - 37304015
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||| | |||||||||||||||||||  ||||||| | |||||||||||||||||||    
T  37303955 ggacaatgtattattatatgcaggggtcggggttcgaaccctggacaccccacttattcac 37304015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 42801524 - 42801456
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||| || || |||||| |||||||||||||||||||  ||||||| ||||||||| ||||||||||    
T  42801524 cagttggtatgataatgcattattatatgcaggggtcggggttcgaaccccggacacctcacttattca 42801456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 6806713 - 6806654
Alignment:
Q  52 gacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||| | |||||||||||||||||  ||||||| |||||||| ||||||||||||    
T  6806713 gacaatgcattgttatatgcaggggtcgggattcgaaccccggacactccacttattcac 6806654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 9409024 - 9408965
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||| | |||||||||||||||||| ||||||| ||||||||| || |||||||    
T  9409024 ggacaatgcattgttatatgcaggggtcggagttcgaaccccggacacctcatttattca 9408965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 29266083 - 29266146
Alignment:
Q  45 ttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||||||||||||| ||||||||||||||||| || |||||||  | |||||| ||||||||    
T  29266083 ttgataggacaatgcattattatatgcaggggtcagagttcgaacatcagacaccacacttatt 29266146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 29841360 - 29841427
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattc 109  Q
    |||||| |||||||||||| ||||||||||| ||| ||   ||||||| |||||||||||||||||||    
T  29841360 cagttggtaggacaatgcattattatatgcaagggccgagattcgaaccccggacaccccacttattc 29841427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 8015854 - 8015916
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||| ||||| ||||||||| |||  ||||||| |||||||||||||||||||||    
T  8015854 taggataatgcattattacatgcaggggccggggttcgaaccccggacaccccacttattcac 8015916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 29106114 - 29106052
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||||||||||||| || | ||||||| |  ||||||||||||||||||    
T  29106114 taggacaatgcattattatatgcaggggccgaagttcgaaccctagacaccccacttattcac 29106052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 973058 - 972993
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    ||||| |||||||||||| |||||||| |||||| |||  ||||||| |||||| |||||||||||    
T  973058 agttggtaggacaatgcattattatatacaggggccggggttcgaaccccggaccccccacttatt 972993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 6614110 - 6614053
Alignment:
Q  53 acaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||| ||||||||||||||| |||  |||||||  |||||||||||||||||||    
T  6614110 acaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattca 6614053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 13862159 - 13862203
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattc 109  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||    
T  13862159 ttatatgcaggggtcggagttcgaac-ccggacaccccacttattc 13862203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 18102012 - 18101963
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||| |||| ||||||| || ||||||||||||||||||    
T  18102012 tattatatgcaggggccggagttcgaaccccagacaccccacttattcac 18101963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 33729790 - 33729859
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||||||||| |||  ||||||   | ||||||||||||||||||    
T  33729790 cagttggtaggacaatgcattattatatgcaggggccggggttcgaatctcagacaccccacttattcac 33729859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 34010547 - 34010616
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||  |||||||||| ||||||| ||||||| | || ||||||||    
T  34010547 cagttggtaggacaatgcattattatatataggggtcggagttcgaaccccggacatctcatttattcac 34010616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 34729504 - 34729552
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  34729504 tattatatgcaggggtcggggttcgaac-ccggacaccccacttattcac 34729552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 19982329 - 19982265
Alignment:
Q  44 gttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||||||| |||||| |||||||||||||||| | | ||||||| ||| |||||||| |||||    
T  19982329 gttgataggataatgcattattatatgcaggggttgaagttcgaaccccgaacaccccatttatt 19982265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 20735249 - 20735189
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||| ||||| |||  ||||||  |||||||||||||||||||||    
T  20735249 ggacaatgcattattatatgtaggggccggggttcgaatcccggacaccccacttattcac 20735189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 27219645 - 27219577
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||||| ||||||||||| ||| |||  ||| ||| ||| |||||||||||||||||    
T  27219645 agttggtaggacaatgcattattatatgcatgggccggggttcaaaccccgtacaccccacttattcac 27219577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 29050812 - 29050872
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacacccca 102  Q
    |||||| |||||||||||| ||||||||||||||| |||  || |||| ||||||||||||    
T  29050812 cagttggtaggacaatgcattattatatgcaggggccggggtttgaactccggacacccca 29050872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 42618487 - 42618427
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| |||||||| ||||||||||  ||||||  ||||| |||||||||||||||    
T  42618487 ggacaatgcattattatatacaggggtcggggttcgaatcccggataccccacttattcac 42618427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 20191475 - 20191522
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||  ||||||| |||||||| ||||||||||||    
T  20191475 ttatatgcaggggtcggggttcgaaccccggacactccacttattcac 20191522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 37986936 - 37986881
Alignment:
Q  56 atgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||| |||||||||||| ||||||| || |||| ||||||| |||||||||||||    
T  37986936 atgcattattatatgcagaggtcggagtttgaaccccggacatcccacttattcac 37986881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 42260781 - 42260734
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||| |||||||| ||||||| |||||||||||||    
T  42260781 ttatatgcagggttcgggtttcgaactccggacatcccacttattcac 42260734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 24205448 - 24205513
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttatt 108  Q
    |||||| |||||||||||| | ||||||| ||||||| | || ||||| ||||||||||||||||||    
T  24205448 cagttggtaggacaatgcattgttatatgtaggggtcaggtt-cgaaccccggacaccccacttatt 24205513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 26302574 - 26302509
Alignment:
Q  44 gttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||| |||||||||||| |||||||| |||||  |||| |||||||  |||||||||||||||||||    
T  26302574 gttggtaggacaatgcattattatatacagggc-cggagttcgaacctcggacaccccacttattca 26302509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 3740991 - 3741032
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||  ||||||| |||||||||||||||    
T  3740991 ttatatgcaggggtcggggttcgaaccccggacaccccactt 3741032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 14487573 - 14487642
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| ||||||||| |||||| ||  |||||||  |||| | |||||||||||||    
T  14487573 cagttggtaggacaatgcattattatatgtaggggttggggttcgaacctcggatatcccacttattcac 14487642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 16720641 - 16720592
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||||  ||| ||| ||||||||||||||| |||||    
T  16720641 tattatatgcaggggtcggggttcaaacaccggacaccccacttcttcac 16720592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 17077400 - 17077441
Alignment:
Q  69 tgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||||  ||||||| ||||||||||||||||||||    
T  17077400 tgcaggggtcgggattcgaaccccggacaccccacttattca 17077441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 22228995 - 22228954
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||| ||||||| |||||||| ||||||    
T  22228995 ttatatgcaggggtcggagttcgaactccggacactccactt 22228954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 27440381 - 27440312
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||| |||||   ||||||| ||| |||||| || |||||||    
T  27440381 cagttggtaggacaatgcattattatatgcagtggtcgaggttcgaaccccgaacaccctacatattcac 27440312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 38618744 - 38618695
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||| ||| |||  ||||||| |||||||||||||||||||||    
T  38618744 tattatatgcaagggccggggttcgaaccccggacaccccacttattcac 38618695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 41319484 - 41319443
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccactt 105  Q
    |||||||||||||||||| ||||||| |||||||| ||||||    
T  41319484 ttatatgcaggggtcggagttcgaaccccggacactccactt 41319443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 2500 - 2569
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||| ||| | | || |||| |||||||||||||||||||||    
T  2500 cagttggtaggacaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcac 2569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 16859 - 16927
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||| ||| |||||| ||||||||||    
T  16859 cagttggtaggacaatgcattattatatgcaggggtcgg-gttcgaaccccgaacaccctacttattcac 16927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 8573 - 8641
Alignment:
Q  43 agttgataggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||||||||| ||||||||| |||||| ||  ||||||| ||| |||||| ||||||||||    
T  8573 agttgataggacaatgcattattatatgtaggggttggggttcgaaccccgaacaccctacttattcac 8641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 7097 - 7157
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||| |||||||||||| ||||||||    
T  7097 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccatttattcac 7157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 25047 - 25106
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||| |||||||||||||||  ||  ||||||| ||||||||||||||||||||    
T  25047 ggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattca 25106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 5323 - 5383
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||| ||||||||||||||| | |  ||||||| ||||||||||||||||||||    
T  5323 taggacaatgcattattatatgcagggg-ccgtgttcgaaccccggacaccccacttattca 5383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 4879 - 4820
Alignment:
Q  51 ggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||| ||||||||||||||| |||  ||||||  |||||||||||||||||||||    
T  4879 ggacaatgcattattatatgcagggg-cggggttcgaatcccggacaccccacttattcac 4820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 451450 - 451390
Alignment:
Q  50 aggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    ||||||||||| | ||||||| ||||| |||  ||||||| ||||||||||||||||||||    
T  451450 aggacaatgcattgttatatgtaggggccggggttcgaactccggacaccccacttattca 451390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 159026 - 159073
Alignment:
Q  42 cagttgataggacaatgcagtattatatgcaggggtcggatttcgaac 89  Q
    |||||| |||||||||||| ||||||||||||||| ||| ||||||||    
T  159026 cagttggtaggacaatgcattattatatgcaggggccgggtttcgaac 159073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1990 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 913 - 975
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||||||||||||  ||  ||||||  || ||||||||||||||||||    
T  913 taggacaatgcattattatatgcaggggctggggttcgaatcccagacaccccacttattcac 975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1112 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold1112
Description:

Target: scaffold1112; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 2498 - 2452
Alignment:
Q  64 ttatatgcaggggtcggatttcgaacgccggacaccccacttattca 110  Q
    |||||||||||||||||  ||||||  ||||||||||||||||||||    
T  2498 ttatatgcaggggtcgggattcgaatcccggacaccccacttattca 2452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 9345 - 9407
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| ||||| |||||||||||||  ||||||  ||| |||| ||||||||||||    
T  9345 taggacaatgcattattacatgcaggggtcggggttcgaattccgaacactccacttattcac 9407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 47393 - 47331
Alignment:
Q  49 taggacaatgcagtattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    |||||||||||| |||||||||||||||  ||  ||||||  || ||||||||||||||||||    
T  47393 taggacaatgcattattatatgcaggggctggggttcgaatcccagacaccccacttattcac 47331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 6696 - 6647
Alignment:
Q  62 tattatatgcaggggtcggatttcgaacgccggacaccccacttattcac 111  Q
    ||||||||||||||| |||  ||||||| |||||||||||| ||||||||    
T  6696 tattatatgcaggggccggggttcgaaccccggacaccccaattattcac 6647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University