View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17989_low_3 (Length: 376)

Name: NF17989_low_3
Description: NF17989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17989_low_3
NF17989_low_3
[»] chr7 (6 HSPs)
chr7 (9-361)||(22722922-22723284)
chr7 (14-54)||(48103381-48103421)
chr7 (13-54)||(20184251-20184292)
chr7 (13-54)||(25742448-25742489)
chr7 (14-55)||(33749655-33749696)
chr7 (14-54)||(37093781-37093821)
[»] chr1 (13 HSPs)
chr1 (13-53)||(957706-957746)
chr1 (13-54)||(362474-362515)
chr1 (13-63)||(42561299-42561349)
chr1 (13-54)||(21930495-21930536)
chr1 (13-54)||(47940583-47940624)
chr1 (14-54)||(3607847-3607887)
chr1 (14-54)||(4299513-4299553)
chr1 (14-54)||(14387133-14387173)
chr1 (14-54)||(15324639-15324679)
chr1 (14-54)||(27928416-27928456)
chr1 (13-53)||(28431716-28431756)
chr1 (14-54)||(36880302-36880342)
chr1 (14-54)||(47940689-47940729)
[»] chr4 (9 HSPs)
chr4 (13-55)||(35360793-35360835)
chr4 (14-54)||(3113171-3113211)
chr4 (13-54)||(4688260-4688301)
chr4 (13-54)||(24969554-24969595)
chr4 (14-55)||(35360688-35360729)
chr4 (14-54)||(3422547-3422587)
chr4 (14-54)||(20435258-20435298)
chr4 (13-57)||(27434727-27434771)
chr4 (14-54)||(42274611-42274651)
[»] chr6 (3 HSPs)
chr6 (13-54)||(4890493-4890534)
chr6 (14-55)||(20501824-20501865)
chr6 (14-54)||(14393574-14393614)
[»] chr3 (18 HSPs)
chr3 (13-54)||(8831858-8831899)
chr3 (14-54)||(36822878-36822918)
chr3 (14-53)||(32362875-32362914)
chr3 (16-54)||(55340306-55340344)
chr3 (13-54)||(4072286-4072327)
chr3 (13-54)||(12838194-12838235)
chr3 (13-54)||(32237407-32237448)
chr3 (14-54)||(404057-404097)
chr3 (14-54)||(4072392-4072432)
chr3 (14-54)||(5529904-5529944)
chr3 (14-54)||(12789619-12789659)
chr3 (14-54)||(13078281-13078321)
chr3 (14-54)||(26976960-26977000)
chr3 (14-54)||(37506244-37506284)
chr3 (14-54)||(38125297-38125337)
chr3 (14-54)||(39850463-39850503)
chr3 (14-54)||(43639200-43639240)
chr3 (13-53)||(46222042-46222082)
[»] chr2 (15 HSPs)
chr2 (13-54)||(2818783-2818824)
chr2 (13-54)||(10552998-10553039)
chr2 (14-54)||(34490469-34490509)
chr2 (13-53)||(39242997-39243037)
chr2 (12-54)||(17434797-17434839)
chr2 (13-54)||(1923993-1924034)
chr2 (13-54)||(7737182-7737223)
chr2 (13-54)||(27920689-27920730)
chr2 (14-54)||(1924099-1924139)
chr2 (14-54)||(2818679-2818719)
chr2 (14-54)||(7737077-7737117)
chr2 (14-54)||(9933687-9933727)
chr2 (13-53)||(17500020-17500060)
chr2 (14-54)||(20892897-20892937)
chr2 (14-54)||(22269735-22269775)
[»] scaffold0188 (1 HSPs)
scaffold0188 (14-54)||(7099-7139)
[»] chr8 (7 HSPs)
chr8 (14-54)||(17426748-17426788)
chr8 (11-54)||(8210336-8210379)
chr8 (13-51)||(11828612-11828650)
chr8 (13-54)||(4261989-4262030)
chr8 (13-54)||(23940817-23940858)
chr8 (13-54)||(38629591-38629632)
chr8 (14-54)||(33100658-33100698)
[»] chr5 (7 HSPs)
chr5 (14-54)||(4265995-4266035)
chr5 (13-69)||(4913266-4913322)
chr5 (13-54)||(4266099-4266140)
chr5 (13-54)||(13754304-13754345)
chr5 (13-54)||(32623228-32623269)
chr5 (14-54)||(13754409-13754449)
chr5 (14-54)||(33629465-33629505)
[»] scaffold0595 (1 HSPs)
scaffold0595 (14-54)||(5714-5754)


Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 9 - 361
Target Start/End: Complemental strand, 22723284 - 22722922
Alignment:
Q  9 gaatatttagttaagaatcatacgaaaaacacctaaaaaattgtacttatgatttttcttaatgatatgcaaattctttataaacaactaatatatttta 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22723284 gaatatttagttaagaatcatacgaaaaacacctaaaaaattgtatctataatttttcttaatgatatgcaaattctttataaacaactaatatatttta 22723185  T
Q  109 aatatgnnnnnnng-----------gagtacttcaactcttttaaataaaattttgtaagaaaaatctcatacaaataaaatcacaatcaagaagcttac 197  Q
    ||||||       |           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22723184 aatatgaaaaaaagagtactattaggagtacttcaactcttttaaataaaattttgtaagaaaaatctcatacaaataaaatcacaatcaagaagcttac 22723085  T
Q  198 aaagaagcttgatcagttattnnnnnnnnnnnnnnnnnngaagcttgatcaaacttacctccttaatagaaaagactatggataatcaaagaaacagatc 297  Q
    |||||||||||||||||||||                  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22723084 aaagaagcttgatcagttattaaaaaaaaaaaaaaaaa-gaagcttgatcaaacttacctccttaatagaaaagactatggataatcaaagaaacagatc 22722986  T
Q  298 cactttcccttgtccaaaaactatttataagaatttaataatccaccagaaataacatttattg 361  Q
    |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22722985 cactttcctttgtacaaaaactatttataagaatttaatgatccaccagaaataacatttattg 22722922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 48103421 - 48103381
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  48103421 tttagttaagaatcatacgaaaaacacctaagaaattgtac 48103381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 20184292 - 20184251
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||||||||||||||| |||||||  ||||||||    
T  20184292 atttagttaagaatcatacgaaaagcacctaaggaattgtac 20184251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 25742489 - 25742448
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| |||| ||||||||||||| |||||||||    
T  25742489 atttagttaagaaccataggaaaaacacctaagaaattgtac 25742448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 33749696 - 33749655
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtact 55  Q
    |||||||||||||||||||||||| ||||||| |||| ||||    
T  33749696 tttagttaagaatcatacgaaaaatacctaaagaattatact 33749655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 37093821 - 37093781
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||| ||||||||||||||||||| |||||| |||||||||    
T  37093821 tttaattaagaatcatacgaaaaatacctaagaaattgtac 37093781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000009; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 957706 - 957746
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgta 53  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  957706 atttagttaagaatcatacgaaaaacacctaagaaattgta 957746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 362474 - 362515
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  362474 atttagttaagaatcatacgaaaagcacctaaagaattgtac 362515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 42561349 - 42561299
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtacttatgattt 63  Q
    ||||||||||||| |||||||||| |||||||  ||||||||||| |||||    
T  42561349 atttagttaagaaccatacgaaaagcacctaaggaattgtacttaagattt 42561299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 21930495 - 21930536
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| ||||||||||||||||||  ||||||||    
T  21930495 atttagttaagaaccatacgaaaaacacctaagtaattgtac 21930536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 47940624 - 47940583
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| |||||||||| ||||||| |||||||||    
T  47940624 atttagttaagaaccatacgaaaagcacctaagaaattgtac 47940583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 3607847 - 3607887
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| |||||||||| ||||||| |||||||||    
T  3607847 tttagttaagaaccatacgaaaagcacctaagaaattgtac 3607887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 4299513 - 4299553
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| ||||||||||||||||||  ||||||||    
T  4299513 tttagttaagaaccatacgaaaaacacctaaggaattgtac 4299553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 14387133 - 14387173
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| ||||||||||||||||||  ||||||||    
T  14387133 tttagttaagaaccatacgaaaaacacctaaggaattgtac 14387173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 15324679 - 15324639
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| |||||||||| ||||||| |||||||||    
T  15324679 tttagttaagaaccatacgaaaagcacctaagaaattgtac 15324639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 27928416 - 27928456
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| ||||||||||||||||||  ||||||||    
T  27928416 tttagttaagaaccatacgaaaaacacctaaggaattgtac 27928456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 28431756 - 28431716
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgta 53  Q
    |||||||||| |||||||||||||| | |||||||||||||    
T  28431756 atttagttaaaaatcatacgaaaaatatctaaaaaattgta 28431716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 36880342 - 36880302
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||| ||| |||||||||||||| |||||||||||||    
T  36880342 tttagttaggaaccatacgaaaaacacttaaaaaattgtac 36880302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 47940689 - 47940729
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| ||||||||||||||||||  ||||||||    
T  47940689 tttagttaagaaccatacgaaaaacacctaaggaattgtac 47940729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 35360793 - 35360835
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtact 55  Q
    ||||||||||||| ||||||||||||| |||||||||||||||    
T  35360793 atttagttaagaaccatacgaaaaacaactaaaaaattgtact 35360835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 3113171 - 3113211
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  3113171 tttagttaagaataatacgacaaacacctaaaaaattgtac 3113211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 4688301 - 4688260
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| |||||||||| ||||||| |||||||||    
T  4688301 atttagttaagaaccatacgaaaagcacctaagaaattgtac 4688260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 24969595 - 24969554
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| |||||||||| |||||||| ||||||||    
T  24969595 atttagttaagaaccatacgaaaagcacctaaagaattgtac 24969554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 35360729 - 35360688
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtact 55  Q
    |||||||||||| ||||||||||| |||||| ||||||||||    
T  35360729 tttagttaagaaccatacgaaaaatacctaataaattgtact 35360688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 3422547 - 3422587
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||| || ||||||||||||||||||| ||||||||    
T  3422547 tttagttaaaaaccatacgaaaaacacctaaagaattgtac 3422587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 20435258 - 20435298
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| |||||||||| |||||||| ||||||||    
T  20435258 tttagttaagaaccatacgaaaagcacctaaagaattgtac 20435298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 27434727 - 27434771
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtactta 57  Q
    ||||||||||||| |||||||||| |||||||  |||||||||||    
T  27434727 atttagttaagaaccatacgaaaagcacctaaggaattgtactta 27434771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 42274611 - 42274651
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| ||||||||||||||||||  ||||||||    
T  42274611 tttagttaagaaccatacgaaaaacacctaaggaattgtac 42274651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 4890534 - 4890493
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  4890534 atttagttaagaaccatacgaaaaacacctaagaaattgtac 4890493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 20501824 - 20501865
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtact 55  Q
    |||||||||||| |||||||||| ||||||| ||||||||||    
T  20501824 tttagttaagaaccatacgaaaagcacctaagaaattgtact 20501865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 14393614 - 14393574
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||||||||||||| |||||||  ||||||||    
T  14393614 tttagttaagaatcatacgaaaagcacctaaggaattgtac 14393574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 8831858 - 8831899
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  8831858 atttagttaagaaccatacgaaaagcacctaaaaaattgtac 8831899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 36822878 - 36822918
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  36822878 tttagttaagaaccatacgaaaagcacctaaaaaattgtac 36822918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 32362914 - 32362875
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgta 53  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  32362914 tttagttaagaaccatacgaaaaacacctaaagaattgta 32362875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 55340344 - 55340306
Alignment:
Q  16 tagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  55340344 tagttaagaatcatacgaaaaacacataagaaattgtac 55340306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 4072327 - 4072286
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| |||||||||| ||||||| |||||||||    
T  4072327 atttagttaagaaccatacgaaaagcacctaagaaattgtac 4072286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 12838194 - 12838235
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||| || ||||||||||||||||||| ||||||||    
T  12838194 atttagttaaaaaccatacgaaaaacacctaaagaattgtac 12838235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 32237448 - 32237407
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| ||||||||||||||||||  ||||||||    
T  32237448 atttagttaagaaccatacgaaaaacacctaaggaattgtac 32237407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 404097 - 404057
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||| ||||||||||||| ||||||| |||||||||    
T  404097 tttagttaaaaatcatacgaaaagcacctaagaaattgtac 404057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 4072392 - 4072432
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| ||||||||||||||||||  ||||||||    
T  4072392 tttagttaagaaccatacgaaaaacacctaaggaattgtac 4072432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 5529944 - 5529904
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| |||||||||| ||||||| |||||||||    
T  5529944 tttagttaagaaccatacgaaaagcacctaagaaattgtac 5529904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 12789659 - 12789619
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| ||||||||||||||||||  ||||||||    
T  12789659 tttagttaagaaccatacgaaaaacacctaaggaattgtac 12789619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 13078281 - 13078321
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||||||||||||||  |||||| |||||||||    
T  13078281 tttagttaagaatcatacgaaaagtacctaagaaattgtac 13078321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 26976960 - 26977000
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||| || ||||||||||||||||||| ||||||||    
T  26976960 tttagttaaaaaccatacgaaaaacacctaaagaattgtac 26977000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 37506244 - 37506284
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| || |||||||||||||||| ||||||||    
T  37506244 tttagttaagaaccacacgaaaaacacctaaagaattgtac 37506284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 38125297 - 38125337
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| ||||||||||||||||||  ||||||||    
T  38125297 tttagttaagaaccatacgaaaaacacctaatgaattgtac 38125337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 39850463 - 39850503
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||||||||||||| |||||||  ||||||||    
T  39850463 tttagttaagaatcatacgaaaagcacctaaggaattgtac 39850503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 43639200 - 43639240
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||||||||||||| |||||||  ||||||||    
T  43639200 tttagttaagaatcatacgaaaagcacctaaggaattgtac 43639240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 46222082 - 46222042
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgta 53  Q
    |||||||||| || |||||||||||||||||| ||||||||    
T  46222082 atttagttaaaaaccatacgaaaaacacctaagaaattgta 46222042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000005; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 2818783 - 2818824
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| ||||||||||||||||||| ||||||||    
T  2818783 atttagttaagaaccatacgaaaaacacctaaagaattgtac 2818824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 10552998 - 10553039
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  10552998 atttagttaagaatcatacgaaaaacacctaaggaattgtac 10553039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 34490509 - 34490469
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  34490509 tttagttaagaaccatacgaaaaacacctaaagaattgtac 34490469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 39243037 - 39242997
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgta 53  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  39243037 atttagttaagaatcatacgaaaaatacctaagaaattgta 39242997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 17434797 - 17434839
Alignment:
Q  12 tatttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||||||||||||||||||| ||||  ||||||||    
T  17434797 tatttagttaagaatcatacgaaaaacatctaaggaattgtac 17434839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 1924034 - 1923993
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| |||||||||| ||||||| |||||||||    
T  1924034 atttagttaagaaccatacgaaaagcacctaagaaattgtac 1923993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 7737182 - 7737223
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||||||||||||||| |||||||  ||||||||    
T  7737182 atttagttaagaatcatacgaaaagcacctaaggaattgtac 7737223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 27920689 - 27920730
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| |||||||||| || ||||||||||||||    
T  27920689 atttagttaagaaccatacgaaaagcagctaaaaaattgtac 27920730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 1924099 - 1924139
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| ||||||||||||||||||  ||||||||    
T  1924099 tttagttaagaaccatacgaaaaacacctaaggaattgtac 1924139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 2818719 - 2818679
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||||||||||||| |||||||  ||||||||    
T  2818719 tttagttaagaatcatacgaaaagcacctaaggaattgtac 2818679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 7737117 - 7737077
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||||||||| |||| ||||||| |||||||||    
T  7737117 tttagttaagaatcataccaaaagcacctaagaaattgtac 7737077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 9933687 - 9933727
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| |||||||||| ||||||| |||||||||    
T  9933687 tttagttaagaaccatacgaaaagcacctaagaaattgtac 9933727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 17500060 - 17500020
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgta 53  Q
    ||||||||||||| |||||||||||||| ||| ||||||||    
T  17500060 atttagttaagaaccatacgaaaaacacataagaaattgta 17500020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 20892937 - 20892897
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| |||||||||| ||||||| |||||||||    
T  20892937 tttagttaagaaccatacgaaaagcacctaagaaattgtac 20892897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 22269775 - 22269735
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||| |||||||||||||||||||||  ||||||||    
T  22269775 tttagttaaaaatcatacgaaaaacacctaaggaattgtac 22269735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 7139 - 7099
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  7139 tttagttaagaatcatacgaaaaacacctaaggaattgtac 7099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 17426748 - 17426788
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  17426748 tttagttaagaaccatacgaaaagcacctaaaaaattgtac 17426788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 8210379 - 8210336
Alignment:
Q  11 atatttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||||||||||||||||| |||||||  ||||||||    
T  8210379 atatttagttaagaatcatacgaaaagcacctaaggaattgtac 8210336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 11828650 - 11828612
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattg 51  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  11828650 atttagttaagaaccatacgaaaaacacctaagaaattg 11828612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 4262030 - 4261989
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| |||||||||| |||||||| ||||||||    
T  4262030 atttagttaagaaccatacgaaaagcacctaaagaattgtac 4261989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 23940858 - 23940817
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||||||||||||||| ||| ||| |||||||||    
T  23940858 atttagttaagaatcatacgaaaagcacttaagaaattgtac 23940817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 38629591 - 38629632
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| ||||||||||||||||||  ||||||||    
T  38629591 atttagttaagaaccatacgaaaaacacctaaggaattgtac 38629632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 33100698 - 33100658
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| |||||||||| ||||||| |||||||||    
T  33100698 tttagttaagaaccatacgaaaagcacctaagaaattgtac 33100658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 4266035 - 4265995
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  4266035 tttagttaagaaccatacgaaaaacacctaagaaattgtac 4265995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 4913266 - 4913322
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtacttatgatttttctta 69  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| || | |||||||||    
T  4913266 atttagttaagaaccatacaaaaaacacctaagaaattgtacgtaagttttttctta 4913322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 4266099 - 4266140
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| ||||||||||||||||||  ||||||||    
T  4266099 atttagttaagaaccatacgaaaaacacctaaggaattgtac 4266140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 13754345 - 13754304
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||||||||||||||||||| |||  ||||||||    
T  13754345 atttagttaagaatcatacgaaaaacacataaggaattgtac 13754304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 32623269 - 32623228
Alignment:
Q  13 atttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    ||||||||||||| ||||||||||||||||||  ||||||||    
T  32623269 atttagttaagaaccatacgaaaaacacctaaggaattgtac 32623228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 13754409 - 13754449
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| ||||||||||||||||||  ||||||||    
T  13754409 tttagttaagaaccatacgaaaaacacctaagtaattgtac 13754449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 33629465 - 33629505
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||||||||||||||||| ||||  ||||||||    
T  33629465 tttagttaagaatcatacgaaaaacatctaaggaattgtac 33629505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 5754 - 5714
Alignment:
Q  14 tttagttaagaatcatacgaaaaacacctaaaaaattgtac 54  Q
    |||||||||||| |||||||||| |||||||| ||||||||    
T  5754 tttagttaagaaccatacgaaaagcacctaaagaattgtac 5714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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