View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17989_low_6 (Length: 266)

Name: NF17989_low_6
Description: NF17989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17989_low_6
NF17989_low_6
[»] chr7 (56 HSPs)
chr7 (12-156)||(48079497-48079641)
chr7 (162-240)||(48079674-48079752)
chr7 (162-235)||(22760894-22760967)
chr7 (175-239)||(18056743-18056807)
chr7 (181-240)||(13106749-13106808)
chr7 (169-240)||(25590649-25590720)
chr7 (162-225)||(26459392-26459455)
chr7 (162-240)||(2446339-2446417)
chr7 (162-240)||(5668538-5668616)
chr7 (75-156)||(11338213-11338294)
chr7 (162-238)||(20335800-20335876)
chr7 (181-240)||(279921-279980)
chr7 (181-239)||(11700215-11700272)
chr7 (162-240)||(22035429-22035507)
chr7 (162-240)||(43663062-43663140)
chr7 (75-156)||(5864174-5864255)
chr7 (175-240)||(7309400-7309464)
chr7 (190-238)||(4572266-4572314)
chr7 (175-239)||(15137597-15137661)
chr7 (176-240)||(21558173-21558237)
chr7 (162-238)||(21877839-21877915)
chr7 (162-238)||(23301571-23301647)
chr7 (162-237)||(5579204-5579279)
chr7 (90-156)||(5185550-5185616)
chr7 (169-239)||(9183159-9183229)
chr7 (162-240)||(11720927-11721005)
chr7 (162-240)||(17040979-17041057)
chr7 (182-240)||(30579386-30579444)
chr7 (162-240)||(38374566-38374644)
chr7 (162-240)||(39631875-39631953)
chr7 (162-240)||(43215215-43215293)
chr7 (162-240)||(45709675-45709753)
chr7 (167-240)||(17113831-17113904)
chr7 (162-211)||(23552149-23552198)
chr7 (183-240)||(41487411-41487468)
chr7 (175-240)||(41519077-41519142)
chr7 (162-238)||(7801211-7801287)
chr7 (161-240)||(33460389-33460469)
chr7 (190-234)||(41907615-41907659)
chr7 (161-216)||(7721399-7721454)
chr7 (181-216)||(16964276-16964311)
chr7 (165-240)||(25132346-25132420)
chr7 (162-225)||(25655210-25655273)
chr7 (162-233)||(29385717-29385788)
chr7 (161-240)||(45228992-45229071)
chr7 (162-212)||(3174958-3175008)
chr7 (162-240)||(43590938-43591016)
chr7 (162-240)||(48771969-48772047)
chr7 (181-223)||(49050475-49050517)
chr7 (181-226)||(7744093-7744138)
chr7 (162-239)||(33222401-33222478)
chr7 (181-238)||(37117123-37117180)
chr7 (162-210)||(30442519-30442567)
chr7 (170-238)||(37085518-37085586)
chr7 (180-240)||(41975936-41975996)
chr7 (162-214)||(48959229-48959281)
[»] chr3 (53 HSPs)
chr3 (162-240)||(10445106-10445184)
chr3 (75-156)||(31996616-31996697)
chr3 (162-240)||(4844478-4844556)
chr3 (162-240)||(4870174-4870252)
chr3 (162-240)||(51903845-51903923)
chr3 (162-240)||(31520572-31520650)
chr3 (162-240)||(44743822-44743900)
chr3 (162-240)||(20501727-20501804)
chr3 (161-240)||(47236938-47237017)
chr3 (162-240)||(10499076-10499154)
chr3 (162-240)||(19716228-19716306)
chr3 (162-240)||(30311337-30311415)
chr3 (162-226)||(28703385-28703449)
chr3 (176-240)||(30232375-30232439)
chr3 (167-239)||(53412981-53413053)
chr3 (101-156)||(9509223-9509278)
chr3 (101-156)||(9517198-9517253)
chr3 (162-233)||(12761543-12761614)
chr3 (162-240)||(8075094-8075172)
chr3 (162-216)||(14186679-14186732)
chr3 (90-156)||(17619512-17619578)
chr3 (162-240)||(28531025-28531103)
chr3 (162-240)||(30510166-30510244)
chr3 (170-240)||(33899653-33899723)
chr3 (162-240)||(37788433-37788510)
chr3 (162-211)||(21960582-21960631)
chr3 (162-211)||(27259192-27259241)
chr3 (175-240)||(44069802-44069867)
chr3 (162-226)||(15048042-15048106)
chr3 (162-238)||(25035736-25035812)
chr3 (164-240)||(52769950-52770026)
chr3 (181-232)||(8796068-8796119)
chr3 (170-225)||(27093343-27093398)
chr3 (170-233)||(47810718-47810781)
chr3 (162-240)||(2667893-2667971)
chr3 (162-240)||(11612330-11612408)
chr3 (162-240)||(30715773-30715850)
chr3 (169-223)||(31608508-31608562)
chr3 (175-209)||(47454615-47454649)
chr3 (162-240)||(54990733-54990811)
chr3 (169-226)||(3427534-3427591)
chr3 (162-223)||(8051245-8051306)
chr3 (183-240)||(13808003-13808059)
chr3 (162-211)||(32651434-32651483)
chr3 (181-226)||(34062529-34062574)
chr3 (170-211)||(36720420-36720461)
chr3 (75-156)||(37045825-37045906)
chr3 (162-211)||(39253728-39253777)
chr3 (191-240)||(42358017-42358066)
chr3 (189-234)||(46576398-46576443)
chr3 (170-238)||(8170711-8170779)
chr3 (199-239)||(31510686-31510726)
chr3 (169-237)||(32638983-32639051)
[»] chr1 (70 HSPs)
chr1 (46-156)||(48532744-48532854)
chr1 (175-240)||(51814538-51814603)
chr1 (181-240)||(16893444-16893503)
chr1 (162-240)||(12587301-12587378)
chr1 (90-156)||(6575048-6575114)
chr1 (162-240)||(43445994-43446072)
chr1 (162-234)||(31383771-31383843)
chr1 (169-240)||(2799900-2799971)
chr1 (161-240)||(40810497-40810576)
chr1 (169-240)||(42983341-42983412)
chr1 (162-240)||(6122825-6122903)
chr1 (162-240)||(8177149-8177227)
chr1 (162-240)||(31605815-31605893)
chr1 (166-240)||(40257434-40257508)
chr1 (162-239)||(9165163-9165240)
chr1 (162-215)||(12370194-12370247)
chr1 (175-240)||(42949259-42949324)
chr1 (162-238)||(1094556-1094632)
chr1 (192-240)||(23471052-23471100)
chr1 (164-240)||(39966126-39966202)
chr1 (162-240)||(17297015-17297094)
chr1 (161-240)||(18037580-18037659)
chr1 (181-240)||(45266884-45266943)
chr1 (162-240)||(10526854-10526932)
chr1 (162-216)||(17745247-17745301)
chr1 (169-223)||(33700757-33700811)
chr1 (162-240)||(36371501-36371579)
chr1 (162-240)||(50901613-50901690)
chr1 (181-238)||(19088259-19088316)
chr1 (163-240)||(44126427-44126504)
chr1 (175-240)||(44961809-44961874)
chr1 (183-239)||(2220024-2220080)
chr1 (170-226)||(3265963-3266019)
chr1 (176-240)||(3799951-3800015)
chr1 (190-238)||(4280420-4280468)
chr1 (162-238)||(9117150-9117226)
chr1 (160-240)||(10150836-10150916)
chr1 (162-210)||(15786317-15786365)
chr1 (161-209)||(17410261-17410309)
chr1 (162-230)||(18459208-18459276)
chr1 (162-238)||(21547449-21547525)
chr1 (191-239)||(42858605-42858653)
chr1 (175-226)||(8904458-8904509)
chr1 (165-240)||(15064999-15065074)
chr1 (162-209)||(16169976-16170023)
chr1 (175-238)||(21392881-21392944)
chr1 (162-233)||(34228905-34228975)
chr1 (161-240)||(41508861-41508940)
chr1 (167-225)||(1247149-1247207)
chr1 (162-240)||(4825002-4825079)
chr1 (162-232)||(19940847-19940917)
chr1 (162-240)||(27476738-27476816)
chr1 (182-240)||(29753700-29753758)
chr1 (162-240)||(31794231-31794309)
chr1 (166-239)||(52029904-52029978)
chr1 (162-211)||(4566579-4566628)
chr1 (189-234)||(7766829-7766874)
chr1 (189-234)||(8077697-8077742)
chr1 (189-234)||(9500457-9500502)
chr1 (162-239)||(9964469-9964546)
chr1 (189-234)||(15059504-15059549)
chr1 (189-234)||(18646903-18646948)
chr1 (175-240)||(40814375-40814440)
chr1 (175-224)||(51281395-51281444)
chr1 (175-215)||(19528319-19528359)
chr1 (170-238)||(24047071-24047139)
chr1 (175-219)||(26232349-26232393)
chr1 (184-240)||(29738251-29738307)
chr1 (161-240)||(45235345-45235425)
chr1 (162-238)||(52336743-52336819)
[»] chr2 (45 HSPs)
chr2 (162-241)||(42327361-42327440)
chr2 (75-156)||(18488315-18488396)
chr2 (162-239)||(19244140-19244217)
chr2 (162-240)||(12086096-12086174)
chr2 (162-240)||(37480106-37480184)
chr2 (162-240)||(42602585-42602663)
chr2 (166-238)||(42860383-42860455)
chr2 (162-233)||(21213800-21213871)
chr2 (161-240)||(29503301-29503379)
chr2 (175-237)||(33569828-33569890)
chr2 (162-240)||(39715023-39715101)
chr2 (161-238)||(25637181-25637258)
chr2 (181-237)||(2311774-2311830)
chr2 (160-240)||(27244337-27244417)
chr2 (162-240)||(7799003-7799080)
chr2 (170-240)||(19016070-19016140)
chr2 (162-240)||(37755938-37756016)
chr2 (162-223)||(23140896-23140957)
chr2 (162-223)||(23552686-23552747)
chr2 (162-214)||(4262295-4262347)
chr2 (192-240)||(37971956-37972004)
chr2 (181-240)||(2295962-2296021)
chr2 (169-240)||(14500315-14500386)
chr2 (161-224)||(33839243-33839306)
chr2 (190-240)||(14780565-14780615)
chr2 (162-240)||(41504903-41504981)
chr2 (162-239)||(23052491-23052568)
chr2 (162-211)||(33582004-33582053)
chr2 (175-239)||(360711-360775)
chr2 (162-206)||(28846722-28846766)
chr2 (162-238)||(29197345-29197421)
chr2 (162-225)||(42922445-42922509)
chr2 (162-237)||(26482124-26482198)
chr2 (161-208)||(32687511-32687558)
chr2 (162-225)||(40416372-40416435)
chr2 (170-240)||(21195643-21195713)
chr2 (183-240)||(1435116-1435172)
chr2 (190-239)||(9318043-9318092)
chr2 (162-239)||(12994345-12994421)
chr2 (161-226)||(19322798-19322863)
chr2 (175-240)||(34041555-34041620)
chr2 (175-239)||(3001423-3001487)
chr2 (162-238)||(11251118-11251194)
chr2 (182-238)||(16951429-16951485)
chr2 (182-238)||(17022094-17022150)
[»] chr8 (39 HSPs)
chr8 (162-240)||(968393-968471)
chr8 (76-157)||(28597647-28597728)
chr8 (162-240)||(29431042-29431120)
chr8 (162-240)||(2203523-2203601)
chr8 (19-156)||(23554293-23554431)
chr8 (162-240)||(18540329-18540407)
chr8 (166-240)||(28783095-28783169)
chr8 (162-240)||(29858016-29858094)
chr8 (162-209)||(16852371-16852418)
chr8 (161-240)||(30774703-30774782)
chr8 (162-240)||(3624611-3624688)
chr8 (162-240)||(6536551-6536629)
chr8 (162-240)||(8485030-8485108)
chr8 (162-240)||(11819807-11819885)
chr8 (90-156)||(11852150-11852216)
chr8 (162-236)||(35690035-35690109)
chr8 (162-238)||(7140740-7140815)
chr8 (162-226)||(33017245-33017309)
chr8 (169-240)||(11492040-11492111)
chr8 (162-240)||(44780081-44780159)
chr8 (170-239)||(23361617-23361686)
chr8 (182-238)||(31087227-31087283)
chr8 (175-239)||(35287760-35287824)
chr8 (161-224)||(13129698-13129761)
chr8 (162-209)||(19703485-19703532)
chr8 (162-213)||(22193358-22193409)
chr8 (176-239)||(43594286-43594349)
chr8 (160-214)||(18546355-18546409)
chr8 (162-240)||(27750761-27750839)
chr8 (192-238)||(31843850-31843896)
chr8 (90-156)||(33694072-33694138)
chr8 (170-212)||(35641896-35641938)
chr8 (161-238)||(3305157-3305234)
chr8 (175-208)||(11928730-11928763)
chr8 (175-240)||(33727840-33727905)
chr8 (162-226)||(12988459-12988523)
chr8 (162-238)||(15948018-15948094)
chr8 (192-240)||(16317671-16317719)
chr8 (175-223)||(28540466-28540514)
[»] chr6 (34 HSPs)
chr6 (162-240)||(6385893-6385971)
chr6 (162-240)||(31622958-31623036)
chr6 (162-240)||(33549135-33549213)
chr6 (152-240)||(23910080-23910166)
chr6 (162-240)||(20213072-20213150)
chr6 (162-240)||(22107095-22107173)
chr6 (162-240)||(34444834-34444912)
chr6 (75-156)||(902845-902926)
chr6 (181-240)||(8597714-8597773)
chr6 (181-240)||(24333992-24334051)
chr6 (169-240)||(30127438-30127509)
chr6 (192-238)||(2484781-2484827)
chr6 (162-240)||(3172735-3172813)
chr6 (162-240)||(12188270-12188348)
chr6 (162-212)||(12234502-12234552)
chr6 (162-240)||(14557993-14558070)
chr6 (191-240)||(32250817-32250866)
chr6 (161-209)||(16405115-16405163)
chr6 (181-216)||(9626082-9626117)
chr6 (162-240)||(10338141-10338219)
chr6 (190-240)||(11306141-11306191)
chr6 (162-212)||(19162814-19162864)
chr6 (189-234)||(1344985-1345030)
chr6 (190-223)||(6691535-6691568)
chr6 (189-234)||(11448921-11448966)
chr6 (161-210)||(12216774-12216823)
chr6 (183-240)||(18263892-18263949)
chr6 (161-238)||(28363967-28364044)
chr6 (175-216)||(28841458-28841499)
chr6 (162-238)||(346562-346637)
chr6 (174-238)||(10650008-10650072)
chr6 (162-238)||(11103404-11103480)
chr6 (183-239)||(11423618-11423674)
chr6 (162-238)||(24641159-24641235)
[»] chr4 (64 HSPs)
chr4 (162-240)||(37274426-37274504)
chr4 (19-150)||(26442693-26442825)
chr4 (162-240)||(19238544-19238622)
chr4 (162-240)||(23377987-23378065)
chr4 (162-240)||(28635727-28635805)
chr4 (162-240)||(55427167-55427245)
chr4 (75-156)||(35420220-35420301)
chr4 (162-239)||(37109319-37109396)
chr4 (162-240)||(7949421-7949499)
chr4 (162-240)||(46295128-46295206)
chr4 (162-240)||(51954145-51954223)
chr4 (181-240)||(2732044-2732103)
chr4 (162-240)||(32992643-32992721)
chr4 (162-240)||(38869799-38869877)
chr4 (162-240)||(39509101-39509179)
chr4 (162-240)||(51250489-51250567)
chr4 (162-223)||(2622379-2622440)
chr4 (162-239)||(46329195-46329272)
chr4 (175-240)||(51622529-51622594)
chr4 (176-240)||(19229175-19229239)
chr4 (75-156)||(37338750-37338833)
chr4 (181-240)||(43124670-43124729)
chr4 (162-240)||(2184999-2185077)
chr4 (162-240)||(7292765-7292843)
chr4 (162-240)||(8030171-8030249)
chr4 (162-240)||(13015458-13015536)
chr4 (192-238)||(27104997-27105043)
chr4 (90-156)||(45658415-45658481)
chr4 (175-240)||(4249221-4249286)
chr4 (169-238)||(20770949-20771018)
chr4 (75-156)||(30256201-30256282)
chr4 (181-238)||(32662804-32662861)
chr4 (190-234)||(9517743-9517787)
chr4 (186-238)||(22096577-22096629)
chr4 (161-209)||(30938217-30938265)
chr4 (176-240)||(35644129-35644193)
chr4 (175-238)||(15729526-15729589)
chr4 (165-212)||(49576889-49576936)
chr4 (162-240)||(4483268-4483346)
chr4 (166-240)||(8325346-8325420)
chr4 (170-240)||(9936928-9936998)
chr4 (162-240)||(16581724-16581802)
chr4 (177-223)||(33619252-33619298)
chr4 (181-239)||(38838847-38838905)
chr4 (188-238)||(46174353-46174403)
chr4 (189-239)||(49262652-49262702)
chr4 (192-233)||(8034843-8034884)
chr4 (181-238)||(9693467-9693524)
chr4 (183-240)||(15180790-15180847)
chr4 (162-223)||(19680772-19680833)
chr4 (170-223)||(24124039-24124092)
chr4 (162-203)||(24827856-24827897)
chr4 (189-234)||(34844860-34844905)
chr4 (193-238)||(39927162-39927207)
chr4 (189-234)||(40058954-40058999)
chr4 (189-234)||(49287908-49287953)
chr4 (189-234)||(52983669-52983714)
chr4 (161-238)||(53496907-53496984)
chr4 (162-226)||(1730470-1730534)
chr4 (166-214)||(17618316-17618364)
chr4 (184-224)||(23284241-23284281)
chr4 (183-239)||(37443751-37443807)
chr4 (181-209)||(47044767-47044795)
chr4 (182-238)||(51948531-51948587)
[»] scaffold0258 (1 HSPs)
scaffold0258 (162-240)||(15290-15368)
[»] chr5 (35 HSPs)
chr5 (162-240)||(16773838-16773916)
chr5 (166-240)||(30109276-30109349)
chr5 (162-226)||(14285192-14285256)
chr5 (189-240)||(38299591-38299642)
chr5 (162-240)||(84855-84933)
chr5 (162-240)||(29075812-29075890)
chr5 (162-239)||(22020830-22020907)
chr5 (175-240)||(27840986-27841051)
chr5 (162-226)||(34984837-34984901)
chr5 (169-240)||(87391-87461)
chr5 (161-240)||(12877723-12877802)
chr5 (162-240)||(8278242-8278320)
chr5 (162-240)||(14495772-14495850)
chr5 (162-240)||(21589319-21589397)
chr5 (190-240)||(35705045-35705095)
chr5 (162-240)||(39327058-39327135)
chr5 (169-239)||(43442234-43442304)
chr5 (181-238)||(17155872-17155929)
chr5 (175-240)||(29173534-29173599)
chr5 (161-201)||(4793094-4793134)
chr5 (176-240)||(18974005-18974069)
chr5 (170-226)||(25627096-25627152)
chr5 (182-238)||(30000167-30000223)
chr5 (162-234)||(30883171-30883243)
chr5 (183-223)||(35360070-35360110)
chr5 (90-156)||(15863250-15863316)
chr5 (162-240)||(17028231-17028309)
chr5 (162-240)||(35982719-35982797)
chr5 (162-240)||(37258333-37258411)
chr5 (175-240)||(1279035-1279100)
chr5 (181-226)||(7918450-7918495)
chr5 (162-223)||(9842830-9842891)
chr5 (189-234)||(18207257-18207302)
chr5 (181-209)||(17675759-17675787)
chr5 (175-223)||(31074276-31074324)
[»] scaffold0299 (1 HSPs)
scaffold0299 (162-224)||(11559-11621)
[»] scaffold0032 (1 HSPs)
scaffold0032 (169-240)||(112320-112391)
[»] scaffold0368 (1 HSPs)
scaffold0368 (175-240)||(14932-14997)
[»] scaffold0180 (1 HSPs)
scaffold0180 (162-226)||(19943-20007)
[»] scaffold0021 (1 HSPs)
scaffold0021 (169-240)||(156956-157025)
[»] scaffold0238 (1 HSPs)
scaffold0238 (181-240)||(2678-2737)
[»] scaffold0194 (1 HSPs)
scaffold0194 (169-232)||(13021-13084)
[»] scaffold0118 (1 HSPs)
scaffold0118 (181-240)||(41600-41659)
[»] scaffold0008 (1 HSPs)
scaffold0008 (175-238)||(49350-49413)
[»] scaffold0047 (1 HSPs)
scaffold0047 (192-237)||(14942-14987)
[»] scaffold0211 (1 HSPs)
scaffold0211 (162-238)||(24084-24160)
[»] scaffold0006 (1 HSPs)
scaffold0006 (176-240)||(18344-18407)
[»] scaffold0172 (1 HSPs)
scaffold0172 (181-240)||(15744-15803)
[»] scaffold0074 (1 HSPs)
scaffold0074 (162-216)||(45750-45804)
[»] scaffold1367 (1 HSPs)
scaffold1367 (162-211)||(836-885)
[»] scaffold0471 (1 HSPs)
scaffold0471 (170-223)||(8626-8679)
[»] scaffold0002 (1 HSPs)
scaffold0002 (162-223)||(94955-95016)
[»] scaffold0291 (1 HSPs)
scaffold0291 (169-209)||(2468-2508)
[»] scaffold0122 (1 HSPs)
scaffold0122 (162-240)||(6889-6964)


Alignment Details
Target: chr7 (Bit Score: 129; Significance: 8e-67; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 48079497 - 48079641
Alignment:
Q  12 attatactgtttgggtattggttgatgctagtattttgtaattacttgtcagactctttgtaattgagcgtcctctttagtacatcttgtgcttaagagg 111  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48079497 attatattgtttgggtatcggttgatgctagtattttgtaattacttgtcagactctttgtaattgagcgtcctctttagtacatcttgtgcttaagagg 48079596  T
Q  112 cgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  48079597 cgtctctgtttttgttaatatgttccattttagtttcttaaaaaa 48079641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 48079674 - 48079752
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48079674 ttgggacctgggtgtgtggtcctgctcgaggtctcaggtttgattctctccggtgctaatttgagtgggctaatttagc 48079752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 22760894 - 22760967
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaat 235  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||| ||| ||| |||||||||||||||||    
T  22760894 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctccccgatgccaatttgagtgggctaat 22760967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 18056807 - 18056743
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||| |||||||  |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  18056807 gtgtgctcctcctgaaggtctcaggttcgattctccccggtgctaatttgggtgggctaatttag 18056743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 13106808 - 13106749
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||| |||||||||||||||||||||| | |||||||||||| |||||||||||||    
T  13106808 tcctcctcaaggtctcaggttcgattctctctgatgctaatttgagcgggctaatttagc 13106749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 25590649 - 25590720
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||| |||||||||||||||| ||||||||| ||| |||||  ||||||||||||||||||||||    
T  25590649 ctgggagtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaatttgagtgggctaatttagc 25590720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 26459455 - 26459392
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttga 225  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||||| ||||| |||||||    
T  26459455 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttga 26459392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 2446339 - 2446417
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| ||||||||||| ||||| |||||||||||||||||||  ||||  |||||||||||||||    
T  2446339 ttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctccggtgccgatttaggtgggctaatttagc 2446417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 5668616 - 5668538
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||  ||||| ||||||||||||||||||| |||||||||||||| | ||||||  |||||||||||||||    
T  5668616 ttgggacatggaagtgtgctcctcctcgaggtctcaggatcgattctctccggagttaatttatgtgggctaatttagc 5668538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 11338294 - 11338213
Alignment:
Q  75 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    |||||| |||||||||||||| ||||||||| |||||||||||  || ||||  |||||| ||||||||||||||| |||||    
T  11338294 ttgagcttcctctttagtacaccttgtgcttcagaggcgtctccattattgtttatatatcccattttagtttcttcaaaaa 11338213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 20335876 - 20335800
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||||||| ||| ||  ||||||  ||||||||||||    
T  20335876 ttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttggatgggctaattta 20335800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 279980 - 279921
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||  ||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  279980 tcctccttaaggtctcaggttcaattctctccggtgccaatttgggtgggctaatttagc 279921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 11700215 - 11700272
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||||||| ||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  11700215 tcctcctcaaggtctcaggttcgattctct-ctgtgccaatttgagtgggctaatttag 11700272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 22035429 - 22035507
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||| | ||||| |||||||||||| | ||||||||||||||||| |||  ||||| ||||| ||||||||||    
T  22035429 ttgggacctgagagtgtgctcctcctcgaggacccaggttcgattctctcctgtgtcaatttaagtggactaatttagc 22035507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 43663140 - 43663062
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| || | ||||||||||||||| |||||||||||| ||||||||||   |||||| |||| ||||||||||    
T  43663140 ttgggacctaggagcgtggtcctcctcgagatctcaggttcgaatctctccggtatcaatttgggtggactaatttagc 43663062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 5864255 - 5864174
Alignment:
Q  75 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    |||||||||||||||| |||| ||| ||||| |||||| |||| ||| |||| ||||||||| |||||  ||||||||||||    
T  5864255 ttgagcgtcctctttaatacaccttatgcttgagaggcatctccgttattgttaatatattctatttttctttcttaaaaaa 5864174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 7309400 - 7309464
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||||||||||||||| |||||||||||||| |||  ||||| ||||||||||||||||    
T  7309400 gtgtgctcctcctcgaggtctcaagttcgattctctcc-gtgtcaatttaagtgggctaatttagc 7309464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 4572314 - 4572266
Alignment:
Q  190 aggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||    
T  4572314 aggtctcaggttcgattctctccggtgtcaatttgggtgggctaattta 4572266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 15137597 - 15137661
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||| |||||||| |||||||||||| ||||||||| ||||  |||||| ||||||||||||||    
T  15137597 gtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttgggtgggctaatttag 15137661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 21558173 - 21558237
Alignment:
Q  176 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| |||||||| |||||||||||||||||||||| ||||| |||||  ||||| |||||||||    
T  21558173 tgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagc 21558237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 21877839 - 21877915
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||||||||| | ||| |||||||  |||||||| |||||||||||  |||||| || |||||||||||||||||    
T  21877839 ttgggacctgggagggtgctcctccttaaggtctcacgttcgattctccacggtgccaaattgagtgggctaattta 21877915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 23301647 - 23301571
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||| |||| ||||| ||||||| ||||||||| ||| ||||||||   |||||||||||||||| ||||||||    
T  23301647 ttgggacttgggagtgtgctcctccttgaggtctcaagtttgattctctttagtgctaatttgagtggactaattta 23301571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 5579279 - 5579204
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattt 237  Q
    ||||||||| || ||||| |||||||| |||||||||||| || |||| ||||||| |||||| ||||| ||||||    
T  5579279 ttgggaccttggagtgtgctcctcctcaaggtctcaggtttgactctccccggtgccaatttgggtgggataattt 5579204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 5185550 - 5185616
Alignment:
Q  90 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    |||||| ||||||||||| ||||||||| ||| || | |||||||| |||||||||||||| |||||    
T  5185550 agtacaccttgtgcttaaaaggcgtctcggttgttattaatatatttcattttagtttctttaaaaa 5185616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 9183229 - 9183159
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||| ||||| |||||||| | ||||||||||||||| |||| ||||  |||||| ||||||||||||||    
T  9183229 ctgggagtgtgctcctcctcaaagtctcaggttcgattatctctggtgtcaatttgggtgggctaatttag 9183159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 11721005 - 11720927
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||||||  |||| |||||||  |||| |||| |||||||||| || |||| |||||| |||||||||||||||    
T  11721005 ttgggacctgggaatgtgctcctccttaaggtatcagattcgattctccccagtgccaatttgggtgggctaatttagc 11720927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 17041057 - 17040979
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||  ||||| |||||||| ||||||||||||||||||||||  |||| |||||| |||||  ||||||||    
T  17041057 ttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaatttgggtgggtcaatttagc 17040979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 30579386 - 30579444
Alignment:
Q  182 cctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| ||||||||||||||||| |||| ||||| |||||  |||||||||||||||    
T  30579386 cctcctcaaggtctcaggttcgattttctctggtgccaatttaggtgggctaatttagc 30579444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 38374644 - 38374566
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||  | ||||| |||||||| |||||| ||||||||||||| ||||||| |||||  |||||||| ||||||    
T  38374644 ttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctccccggtgccaatttaggtgggctagtttagc 38374566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 39631875 - 39631953
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||  | |||||||| ||||||||||||||||||||||  |||| |||||||| ||| || ||||||    
T  39631875 ttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaatttgagggggttagtttagc 39631953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 43215215 - 43215293
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| || ||||| |||||||| ||||||||||||||||||||||   ||| |||||||| ||| || ||||||    
T  43215215 ttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctcttatgccaatttgagggggttagtttagc 43215293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 45709753 - 45709675
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||| | ||||| |||||||||||||||||||||||||| |||||| | | |||||  ||||||||| |||||    
T  45709753 ttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctccgataccaatttaggtgggctaacttagc 45709675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 17113831 - 17113904
Alignment:
Q  167 acctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| ||||| | |||||| |||||||| ||||||||||||| | |||||||||||| ||| || ||||||    
T  17113831 acctgggagtgtgcttctcctcaaggtctcaagttcgattctctctgatgctaatttgagggggttagtttagc 17113904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 23552149 - 23552198
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 211  Q
    |||||||||||| ||||| |||||||| |||||||| |||||||||||||    
T  23552149 ttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctc 23552198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 41487411 - 41487468
Alignment:
Q  183 ctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| |||||||||||||||||||  ||||||| |||||  |||||||||||||||    
T  41487411 ctcctcaaggtctcaggttcgattcttcccggtgccaatttaggtgggctaatttagc 41487468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 41519142 - 41519077
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| |||| ||| ||||||||| ||||||| |||||||||  |||||| |||||||||||||||    
T  41519142 gtgtgctccttctcaaggtctcagattcgattatctccggtgtcaatttgggtgggctaatttagc 41519077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 7801211 - 7801287
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||||||||| ||||| ||||| || |||||||||||||||  | ||||| ||  ||||| ||||||||||||||    
T  7801211 ttgggacctgggagtgtgctcctcttcaaggtctcaggttcgaacccctccgatgtcaatttaagtgggctaattta 7801287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 33460469 - 33460389
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcc-tcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||| || |||||||||||| || ||||||||| |||||||||| ||||||  |||||  |||||||| ||||||    
T  33460469 tttgggacctaggagtgtggtcctccttcaaggtctcagattcgattctccccggtgtcaatttatgtgggctagtttagc 33460389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 41907659 - 41907615
Alignment:
Q  190 aggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||    
T  41907659 aggtctcaggttcgattctctctggtgccaatttcagtgggctaa 41907615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 7721399 - 7721454
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtg 216  Q
    ||||||||||||| ||||  |||||||| |||||||| ||||||||||||| ||||    
T  7721399 tttgggacctgggagtgtactcctcctcaaggtctcatgttcgattctctctggtg 7721454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 16964276 - 16964311
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtg 216  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16964276 tcctcctcgaggtctcaggatcgattctctccggtg 16964311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 25132420 - 25132346
Alignment:
Q  165 ggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| || ||||| |||| ||  |||||||||||||||||||| ||  |||||||||| |||||||||||||||    
T  25132420 ggacctaggagtgtgctccttcttaaggtctcaggttcgattctc-ccaatgctaatttgggtgggctaatttagc 25132346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 25655273 - 25655210
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttga 225  Q
    |||||| ||| | ||||| |||||||| |||| ||||||||||||||||| ||||| |||||||    
T  25655273 ttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctctctggtgccaatttga 25655210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 29385788 - 29385717
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 233  Q
    ||||||| | || ||||| |||||||| |||||||||||| ||||||||  ||||| |||||| ||||||||    
T  29385788 ttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctctttggtgccaatttgggtgggcta 29385717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 45229071 - 45228992
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||| || ||||| | || || ||||| | |||||||||||||||| |||  ||||| ||||||||||||||||    
T  45229071 tttgggacctaggagtgtgcttcttcttgaggttttaggttcgattctctccagtgtcaatttaagtgggctaatttagc 45228992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 3174958 - 3175008
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctcc 212  Q
    |||||| ||||| ||||| |||  |||||||||||||||||||||||||||    
T  3174958 ttgggatctgggagtgtgctccatctcgaggtctcaggttcgattctctcc 3175008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 43590938 - 43591016
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| |||||||| | |||||||||||||||||| |  |||| ||||   |||||||||||||||    
T  43590938 ttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaatttagc 43591016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 48771969 - 48772047
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| ||||||| |||||||||||||||||| || |  || | |||||  |||||||||||||||    
T  48771969 ttgggatctgggagtgtgctcctccttgaggtctcaggttcgattatcccaagtaccaatttaggtgggctaatttagc 48772047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 49050517 - 49050475
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||    
T  49050517 tcctccttgaggtctcaggttcgattctccccggtgccaattt 49050475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 7744138 - 7744093
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    |||||||| |||||||||||| ||||||||| ||||| ||||||||    
T  7744138 tcctcctcaaggtctcaggtttgattctctctggtgcaaatttgag 7744093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 33222401 - 33222478
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||||||||||  ||||  || ||||| |||||||||||||||||||||| ||||  |||||||| ||| || |||||    
T  33222401 ttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctctctggtgtcaatttgagagggttagtttag 33222478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 37117180 - 37117123
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||| ||||| || |||||||||||||||||||| |||||  |||| ||||||||    
T  37117180 tcctccttgaggtttcgggttcgattctctccggtgccaatttaggtggactaattta 37117123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 30442519 - 30442567
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctct 210  Q
    |||||||||||| || || |||||||| |||||| ||||||||||||||    
T  30442519 ttgggacctgggagtttgctcctcctcaaggtctgaggttcgattctct 30442567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 37085586 - 37085518
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||| ||||| || |||||||||| ||||||||||||||| ||  | | ||||| ||||||||||||||    
T  37085586 tgggagtgtgctcatcctcgaggtttcaggttcgattctccccaataccaatttaagtgggctaattta 37085518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 41975936 - 41975996
Alignment:
Q  180 gtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| | ||||||||| |||||||||||||  |||  ||||| ||||||||||||||||    
T  41975936 gtcctcattgaggtctcaagttcgattctctctagtgtcaatttaagtgggctaatttagc 41975996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 48959229 - 48959281
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccgg 214  Q
    |||||||||  | ||||| |||||||| |||||||| ||||||||||||||||    
T  48959229 ttgggacctatgagtgtgttcctcctcaaggtctcatgttcgattctctccgg 48959281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 8e-30; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 10445184 - 10445106
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10445184 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagtgggctaatttagc 10445106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 31996616 - 31996697
Alignment:
Q  75 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||| || | |||||||||||||||||||||||||||||    
T  31996616 ttgagcgtcctctttagtacaccttgtgcttaagaggcgcctcagttgttattaatatattccattttagtttcttaaaaaa 31996697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 4844556 - 4844478
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||    
T  4844556 ttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagc 4844478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 4870252 - 4870174
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||    
T  4870252 ttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagc 4870174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 51903923 - 51903845
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  51903923 ttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgggctaatttagc 51903845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 31520650 - 31520572
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| ||||||||||||||| ||||| |||||||||| |||  ||||||||||||||||||||||    
T  31520650 ttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaatttgagtgggctaatttagc 31520572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 44743900 - 44743822
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| |||||||||||||||||||||||||| ||||| |||| |||||| ||||| |||||||||    
T  44743900 ttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagc 44743822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 20501727 - 20501804
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||| | ||||| |||||||  ||||||||||||||||||||||| |||| |||||||| |||||||||||||    
T  20501727 ttgggacctgagagtgtgctcctccttaaggtctcaggttcgattctctccagtgccaatttgag-gggctaatttagc 20501804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 47237017 - 47236938
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| ||| ||||| ||||| || |||||||| ||||||||||| ||||||| |||||| ||||||| |||||||    
T  47237017 tttgggacccgggagtgtgctcctcttcaaggtctcatgttcgattctccccggtgccaatttgggtgggcttatttagc 47236938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 10499154 - 10499076
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| || || || |||| ||||||||||||||||||||||||| ||  |||||| |||||||||||||||    
T  10499154 ttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttgggtgggctaatttagc 10499076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 19716228 - 19716306
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||  || ||||| |||||||| ||||||| |||||||||||| ||||||  |||||| |||||||||||||||    
T  19716228 ttgggaccatggagtgtgctcctcctcaaggtctctggttcgattctccccggtgacaatttgggtgggctaatttagc 19716306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 30311337 - 30311415
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| |||||||| |||||||||||||||||||||  ||||| |||||||| ||| || ||||||    
T  30311337 ttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaatttgagggggttagtttagc 30311415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 28703449 - 28703385
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    |||||| ||||| ||||| ||||| || |||||||||||||||||||||| ||||| ||||||||    
T  28703449 ttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctggtgccaatttgag 28703385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 30232375 - 30232439
Alignment:
Q  176 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| ||||||||  |||||||||||| |||||||||||||| ||||||  ||||||||||||||    
T  30232375 tgtgctcctcctcatggtctcaggttccattctctccggtgccaatttggttgggctaatttagc 30232439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 53412981 - 53413053
Alignment:
Q  167 acctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||||| ||||| |||||||| ||||||||||||| |||||||| ||||| |||||||| ||| || |||||    
T  53412981 acctgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttgagggggttagtttag 53413053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 9509278 - 9509223
Alignment:
Q  101 tgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    ||||||| |||||||| |||| |||| ||||||| |||||||||||||||||||||    
T  9509278 tgcttaacaggcgtctttgttattgtgaatatataccattttagtttcttaaaaaa 9509223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 9517253 - 9517198
Alignment:
Q  101 tgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    ||||||| |||||||| |||| |||| ||||||| |||||||||||||||||||||    
T  9517253 tgcttaacaggcgtctttgttattgtgaatatataccattttagtttcttaaaaaa 9517198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 12761543 - 12761614
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 233  Q
    |||||||||||| ||||| ||||||| ||| |||||||||||||| || ||||||| |||||  ||||||||    
T  12761543 ttgggacctgggagtgtgttcctccttgagctctcaggttcgattttccccggtgccaatttaggtgggcta 12761614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 8075172 - 8075094
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| |||||||| |||| ||||||||||||| |||  |||  |||||| |||||||||||||||    
T  8075172 ttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattccctctagtgtcaatttgggtgggctaatttagc 8075094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 14186679 - 14186732
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtg 216  Q
    |||||||||||  ||||| |||||||| |||||||||||||||||||||||||||    
T  14186679 ttgggacctgga-gtgtgctcctcctcaaggtctcaggttcgattctctccggtg 14186732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 17619578 - 17619512
Alignment:
Q  90 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    |||||| ||||| ||||| || |||||| ||| || | |||||||||||||||||||||||||||||    
T  17619578 agtacaccttgtacttaaaagacgtctcggttgttattaatatattccattttagtttcttaaaaaa 17619512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 28531103 - 28531025
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| || || ||||||||||||||| ||| || |||||||| ||||  |||||| |||||||||||||||    
T  28531103 ttgggatctgggagtatgctcctcctcgaggtcttaggctcaattctctctggtgtcaatttgggtgggctaatttagc 28531025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 30510244 - 30510166
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| || || || |||| ||||||||||||||||||||||||||  |||  ||| | ||||||||||||||||    
T  30510244 ttgggacctaggagtatgctccttctcgaggtctcaggttcgattctctctagtgtcaatctaagtgggctaatttagc 30510166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 33899653 - 33899723
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| ||||| |||||||| |||||||||||||||||||||  ||||  |||||| ||| |||||||||||    
T  33899653 tgggagtgtgctcctcctctaggtctcaggttcgattctctttggtgtcaatttgggtgtgctaatttagc 33899723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 37788510 - 37788433
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| |||| || ||||| |||||||| ||||||||||||||||||||||  |||| |||||||| ||| |||||||||    
T  37788510 ttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgag-gggttaatttagc 37788433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 21960582 - 21960631
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 211  Q
    |||||||||| | ||||| |||||||||||||||||| ||||||||||||    
T  21960582 ttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctc 21960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 27259192 - 27259241
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 211  Q
    |||||||||||| ||||| ||||||||||||| ||||||| |||||||||    
T  27259192 ttgggacctgggagtgtgctcctcctcgaggtttcaggtttgattctctc 27259241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 44069802 - 44069867
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| |||||||| |||||||||||| |||||| |||||||| |||||  |||||||| ||||||    
T  44069802 gtgtgctcctcctcaaggtctcaggtttgattctttccggtgccaatttaggtgggctagtttagc 44069867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 15048106 - 15048042
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    |||||| |||||  |||| |||||||| ||||||||||||||||| |||| ||||| ||||||||    
T  15048106 ttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctctggtgccaatttgag 15048042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 25035736 - 25035812
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||||||| |  |||| ||||||||||| | ||||||||||||||| ||||||  |||||| ||||| |||||||    
T  25035736 ttgggacctgagaatgtgctcctcctcgagatttcaggttcgattctcaccggtgtcaatttgggtgggttaattta 25035812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 52770026 - 52769950
Alignment:
Q  164 gggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| ||||| ||||| ||||||| ||||||||||||||||||||||   |||  |||||  |||||||||||||||    
T  52770026 gggatctgggagtgtgctcctccttgaggtctcaggttcgattctctttagtgtcaatttaggtgggctaatttagc 52769950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 8796119 - 8796068
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggct 232  Q
    |||||||| |||||||| ||||||||||||| | |||||||||||| |||||    
T  8796119 tcctcctcaaggtctcaagttcgattctctctgatgctaatttgagcgggct 8796068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 27093398 - 27093343
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttga 225  Q
    |||| ||||| |||||||| |||||||||||| ||||||||| ||||| |||||||    
T  27093398 tgggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttga 27093343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 47810781 - 47810718
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 233  Q
    |||| ||||| |||||| | ||||||| |||| ||||||||||||||| |||||| ||||||||    
T  47810781 tgggagtgtgctcctccgcaaggtctcgggtttgattctctccggtgccaatttgggtgggcta 47810718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 2667893 - 2667971
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| || ||||||||||||||||||||||| ||||  |||  |||||  |||||||| ||||||    
T  2667893 ttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaatttaggtgggctagtttagc 2667971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 11612330 - 11612408
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| |||||||  |||||||||||||||| ||| ||||||| |||||  || | ||||||||||    
T  11612330 ttgggagctgggagtgtgctcctccttaaggtctcaggttcgatgctccccggtgccaatttaggtcgactaatttagc 11612408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 30715773 - 30715850
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| |||||||| | || |||||||||||||||||| |||| ||||||  ||||||| ||||||    
T  30715773 ttgggacttgggagtgtgctcctcctcaatgtttcaggttcgattctctcc-gtgccaatttggatgggctagtttagc 30715850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 31608562 - 31608508
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    ||||| ||||| |||||||||||||||||| || ||||||||| || ||||||||    
T  31608562 ctgggagtgtgctcctcctcgaggtctcagatttgattctctctggggctaattt 31608508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 47454649 - 47454615
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctc 209  Q
    ||||| |||||||||||||||||||||||||||||    
T  47454649 gtgtgctcctcctcgaggtctcaggttcgattctc 47454615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 54990733 - 54990811
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| || | ||| |||||||| ||||||||||||||||||||  || ||  |||||  |||||||||||||||    
T  54990733 ttgggaccttggagcgtgctcctcctcaaggtctcaggttcgattctcctcgatggcaatttaggtgggctaatttagc 54990811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 3427591 - 3427534
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    ||||| ||||| |||||||| ||||||||| ||||||||||||  |||| ||||||||    
T  3427591 ctgggagtgtgctcctcctcaaggtctcagattcgattctctctagtgccaatttgag 3427534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 8051245 - 8051306
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    |||||||||||  || || | ||||||||||||||| ||||||||| ||||||||| |||||    
T  8051245 ttgggacctggcagtatgcttctcctcgaggtctcaagttcgattccctccggtgccaattt 8051306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 13808059 - 13808003
Alignment:
Q  183 ctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||||||| || |||||||| | |||| |||||||||||| |||||||||    
T  13808059 ctcctcgaggtctcagttt-gattctcttcagtgccaatttgagtgggttaatttagc 13808003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 32651483 - 32651434
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 211  Q
    |||||||||||| ||||| |||||||| || |||||| ||||||||||||    
T  32651483 ttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctc 32651434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 34062574 - 34062529
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    |||||||| ||||||||||||| |||||||| ||||| ||||||||    
T  34062574 tcctcctcaaggtctcaggttcaattctctctggtgccaatttgag 34062529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 36720420 - 36720461
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 211  Q
    |||| ||||| ||||||||||||| |||||||||||||||||    
T  36720420 tgggagtgtgctcctcctcgaggtttcaggttcgattctctc 36720461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 37045825 - 37045906
Alignment:
Q  75 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    ||||||| ||||||||||||  ||| |||| |||||| |||||| || |||| |||||||  |||||||  |||||||||||    
T  37045825 ttgagcgacctctttagtacgccttatgctaaagaggtgtctctcttattgtgaatatatatcattttaccttcttaaaaaa 37045906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 39253728 - 39253777
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 211  Q
    |||||| ||||| ||||| ||||| || ||||||||||||||||||||||    
T  39253728 ttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 39253777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 42358017 - 42358066
Alignment:
Q  191 ggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||||||| |||| || || ||||||||||| ||||||||||    
T  42358017 ggtctcaggttcgattttctctggcgccaatttgagtggactaatttagc 42358066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 46576398 - 46576443
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    ||||||||||||||||||| ||| ||||| ||||| ||||||||||    
T  46576398 gaggtctcaggttcgattccctctggtgccaatttcagtgggctaa 46576443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 8170711 - 8170779
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||| ||||| |||| ||| |||||||||||||||||  ||| ||||  |||||| |||||||||||||    
T  8170711 tgggagtgtgctcctactcaaggtctcaggttcgatttcctctggtgtcaatttgggtgggctaattta 8170779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 31510726 - 31510686
Alignment:
Q  199 gttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||||||||| |||||||||||||  ||||||||||||||    
T  31510726 gttcgattctccccggtgctaatttaggtgggctaatttag 31510686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 32638983 - 32639051
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattt 237  Q
    ||||| ||||| || || |||||||||||||||||||| ||||| |||  ||||| ||||| |||||||    
T  32638983 ctgggagtgtgttcatcttcgaggtctcaggttcgattttctccagtgtcaatttaagtggcctaattt 32639051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 48532744 - 48532854
Alignment:
Q  46 tttgtaattacttgtcagactctttgtaattgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagt 145  Q
    |||||||||| ||| || || ||||||  | ||| | ||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  48532744 tttgtaattatttgacaaacactttgtgctcgagtgccctctttagtacaccttgtgcttaagaggcgtctctgtttttgttaatatatcccattttagt 48532843  T
Q  146 ttcttaaaaaa 156  Q
    |||||||||||    
T  48532844 ttcttaaaaaa 48532854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 51814538 - 51814603
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| |||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  51814538 gtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtgggctaatttagc 51814603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 16893444 - 16893503
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  16893444 tcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtgggctaatttagc 16893503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 12587301 - 12587378
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||| | ||||| ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||    
T  12587301 ttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctccggtgc-aatttaggtgggctaatttagc 12587378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 6575114 - 6575048
Alignment:
Q  90 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    |||||||||||||||||| ||||||||| ||| || | ||||||||||||||||||||||| |||||    
T  6575114 agtacatcttgtgcttaaaaggcgtctcggttgttattaatatattccattttagtttcttcaaaaa 6575048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 43445994 - 43446072
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||| || ||||| |||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| ||||||    
T  43445994 ttgggtccttggagtgtgctcctcctcaaggtctcatgttcgattctccccggtgccaatttgagtgggctagtttagc 43446072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 31383843 - 31383771
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    |||||||||||| ||||| ||||||| | ||||||||||||||||||||  ||||| |||||| |||||||||    
T  31383843 ttgggacctgggagtgtgctcctccttggggtctcaggttcgattctcttaggtgccaatttgggtgggctaa 31383771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 2799900 - 2799971
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||| |||||||| |||||||||||||||||||||| ||||| |||||||| ||| || ||||||    
T  2799900 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagc 2799971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 40810497 - 40810576
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| ||||| ||||| ||||| || |||||||||||||||||||||| ||||| |||||||| ||| || ||||||    
T  40810497 tttgggatctgggagtgtgttcctcttcaaggtctcaggttcgattctctctggtgccaatttgagagggttagtttagc 40810576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 42983412 - 42983341
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||||||||||| ||||||  ||||||||||||||| ||||| ||||| ||||| ||||||||||    
T  42983412 ctgggagtgtggtcctccttgaggtccgaggttcgattctctcaggtgccaatttaagtggactaatttagc 42983341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 6122825 - 6122903
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| |||||||| |||||||||||||||||| |||  |||  |||||| |||||||||||||||    
T  6122825 ttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagc 6122903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 8177227 - 8177149
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| |||||||| |||| ||||||||||||||||| ||||| |||||||| ||| || ||||||    
T  8177227 ttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgagggggttagtttagc 8177149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 31605893 - 31605815
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| |  ||||| |||||||| |||||||| ||||||||||| ||||||| |||||| |||||||| ||||||    
T  31605893 ttgggaccttgaagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccaatttgggtgggctagtttagc 31605815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 40257434 - 40257508
Alignment:
Q  166 gacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||| ||||| ||||||||||||||||| |||| ||||| |||||||  |||||| |||||||| ||||||    
T  40257434 gacctgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaatttgggtgggctagtttagc 40257508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 9165240 - 9165163
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||||||||||| ||||| |||||||| | ||||||||||| |||||||| ||||| |||||||| ||| || |||||    
T  9165240 ttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctggtgccaatttgagggggttactttag 9165163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 12370194 - 12370247
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggt 215  Q
    |||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||    
T  12370194 ttgggacctgggagtgtgctcctcctcgaggtctcatgtttgattctctccggt 12370247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 42949324 - 42949259
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| |||||||||||||||||  || ||||||||||||||  ||||| ||||||||||||||||    
T  42949324 gtgtgctcctcctcgaggtctcatatttgattctctccggtgacaatttaagtgggctaatttagc 42949259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 1094556 - 1094632
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||| ||||| | ||||| |||||| ||||||||||  |||||||||||||||||| |||||  |||||||||||||    
T  1094556 ttggaacctgtgagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaatttaggtgggctaattta 1094632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 23471100 - 23471052
Alignment:
Q  192 gtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  23471100 gtctcaggttcgattctctccggtgtcaatttgagttggctaatttagc 23471052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 39966126 - 39966202
Alignment:
Q  164 gggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| || ||||  |||||||| |||||||||||||| ||||| |||||||||||||| ||| |||| ||||||    
T  39966126 gggaccttggagtgtactcctcctcaaggtctcaggttcgtttctccccggtgctaatttgggtgtgctagtttagc 39966202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 17297015 - 17297094
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctcc-ggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| || ||||| |||||||| |||||||| ||| ||||||| || ||||| |||||| |||||||||||||||    
T  17297015 ttgggaccttggagtgtgctcctcctcaaggtctcatgtttgattctcccccggtgccaatttgggtgggctaatttagc 17297094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 18037659 - 18037580
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||| |||| ||||| ||||  ||||| ||||| |||||||||||||||||||  ||||  |||||||||||||||    
T  18037659 tttgggacttgggagtgtgctccttttcgagatctcaagttcgattctctccggtgccgatttaggtgggctaatttagc 18037580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 45266884 - 45266943
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||  ||||||| ||||||    
T  45266884 tcctcctcaaggtctcaggttcgattctccccggtgccaatttggatgggctagtttagc 45266943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 10526854 - 10526932
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| || || |||||||| ||||||||| |||||||||||| || |  |||||| ||||| |||||||||    
T  10526854 ttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctggagtcaatttgggtgggttaatttagc 10526932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 17745301 - 17745247
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtg 216  Q
    |||||||||| | ||||| ||||||||||||||||| ||||||||||||| ||||    
T  17745301 ttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtg 17745247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 33700811 - 33700757
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    ||||| ||||| |||||||| |||||||||||||||||||||| ||||| |||||    
T  33700811 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 33700757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 36371501 - 36371579
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| ||||||| ||||| |||||||| |||||| ||||||||||||||| | ||| |||||||| ||| || ||||||    
T  36371501 ttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctgatgccaatttgagggggttagtttagc 36371579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 50901613 - 50901690
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||  ||||| |||||||||||||||||  ||||||||||| | |||| |||||  |||||||||||||||    
T  50901613 ttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctct-cagtgccaatttaggtgggctaatttagc 50901690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 19088259 - 19088316
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||||| |||| | ||||||||||| ||| |||| |||||||||||||||||||||    
T  19088259 tcctcctcaaggttttaggttcgattcactctggtgttaatttgagtgggctaattta 19088316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 44126427 - 44126504
Alignment:
Q  163 tgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||||| ||||| |||||| ||||||||||| || |||||||||  |||| |||||  || ||||||||||||    
T  44126427 tgggacctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaatttaggtaggctaatttagc 44126504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 44961809 - 44961874
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||||||  |||||||||||||||||||||  |||  |||||| |||||||||||||||    
T  44961809 gtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaatttgggtgggctaatttagc 44961874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 2220024 - 2220080
Alignment:
Q  183 ctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||||||||||||||||||||||||||||  ||  ||||| | |||||||||||||    
T  2220024 ctcctcgaggtctcaggttcgattctctccaatgtcaatttaaatgggctaatttag 2220080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 3265963 - 3266019
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    |||| ||||| |||||||| |||||||||||||||||||||| ||| | ||||||||    
T  3265963 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctggttccaatttgag 3266019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 3799951 - 3800015
Alignment:
Q  176 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| |||||||||| || |||||||||||||||||  |||| |||||  |||||||||||||||    
T  3799951 tgtgctcctcctcgaagtttcaggttcgattctctctagtgccaatttaggtgggctaatttagc 3800015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 4280468 - 4280420
Alignment:
Q  190 aggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||||||||| |||||||| ||||||||||||| ||| |||||||||    
T  4280468 aggtctcaggtttgattctcttcggtgctaatttgggtgagctaattta 4280420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 9117150 - 9117226
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||| ||||  ||||| ||||||| |||||||||||||||||||| ||| || |||||||| | | |||||||||    
T  9117150 ttgggatctggaagtgtgctcctccttgaggtctcaggttcgattctttccagtactaatttgggcgtgctaattta 9117226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 10150916 - 10150836
Alignment:
Q  160 atttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| |||| ||||  |||||||| | ||||||||||| |||||||| ||||  | ||||||||| ||||||||||    
T  10150916 atttgggacttgggagtgtactcctcctcaaagtctcaggttcaattctctcaggtgtcagtttgagtggactaatttagc 10150836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 15786365 - 15786317
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctct 210  Q
    |||||| ||||| ||||| |||||||| |||||||||||||||||||||    
T  15786365 ttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 15786317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 17410261 - 17410309
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 209  Q
    ||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  17410261 tttgggatctgggagtgtggtcctcctcgagatctcaagttcgattctc 17410309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 18459276 - 18459208
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtggg 230  Q
    ||||||| |||| ||||| ||||||| ||||||| || || |||||||||  |||||||||||||||||    
T  18459276 ttgggacttgggagtgtgctcctccttgaggtcttagatttgattctctcatgtgctaatttgagtggg 18459208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 21547525 - 21547449
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||| |||| | ||| ||||||||||||| ||||||||||||||||| | ||| |||||  |||||||| ||||    
T  21547525 ttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaatttaggtgggctagttta 21547449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 42858653 - 42858605
Alignment:
Q  191 ggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||||||||||||||||||| ||||  ||||||| |||||||||||||    
T  42858653 ggtctcaggttcgattctctctggtgtcaatttgaatgggctaatttag 42858605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 8904458 - 8904509
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    ||||| |||||||| |||||||| ||||||||||||| ||||| ||||||||    
T  8904458 gtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaatttgag 8904509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 15064999 - 15065074
Alignment:
Q  165 ggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| | ||||| || ||||| ||||||||||||| ||| || ||||||  |||||| |||||||||||||||    
T  15064999 ggacctgagagtgtgctcatcctcaaggtctcaggttcaattttccccggtgtcaatttgggtgggctaatttagc 15065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 16170023 - 16169976
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 209  Q
    |||||||||||| ||||| |||||||| |||| |||||||||||||||    
T  16170023 ttgggacctgggagtgtgttcctcctcaaggtttcaggttcgattctc 16169976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 21392881 - 21392944
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||| |||||||| |||||||||||||||| |||  | |||| | ||||||||||||||||||    
T  21392881 gtgtgctcctcctcaaggtctcaggttcgatcctcctctgtgccagtttgagtgggctaattta 21392944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 34228905 - 34228975
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 233  Q
    ||||||||| || ||||| ||||| || |||||||||||| ||||||||||||||| |||||  ||||||||    
T  34228905 ttgggacctcggagtgtgttcctc-tcaaggtctcaggttggattctctccggtgccaattttggtgggcta 34228975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 41508861 - 41508940
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| ||||| ||||| |||||||| ||||||||| ||  ||||  |||||||  || |||||||||||||||||||    
T  41508861 tttgggatctgggagtgtgctcctcctcaaggtctcagatttaattccatccggtgtcaacttgagtgggctaatttagc 41508940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 1247149 - 1247207
Alignment:
Q  167 acctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttga 225  Q
    ||||||| ||||  |||||||| |||||||||||||||||||||| ||| | |||||||    
T  1247149 acctgggagtgtactcctcctcaaggtctcaggttcgattctctctggtaccaatttga 1247207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 4825002 - 4825079
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| || ||||| ||||| || |||||||||||| |||||||   |||||||||||| || ||||||||||||    
T  4825002 ttgggaccttggagtgtgctcctcttcaaggtctcaggtttgattctccgtggtgctaatttgggt-ggctaatttagc 4825079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 19940917 - 19940847
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggct 232  Q
    ||||| ||| || ||||| |||||||  |||||||||||| ||||||||||||||| |||||  |||||||    
T  19940917 ttgggtccttggagtgtgctcctccttaaggtctcaggtttgattctctccggtgccaatttatgtgggct 19940847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 27476816 - 27476738
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| | || ||||| ||||||||||| ||||| ||| ||||||||| |||||  ||||  |||||||||||||||    
T  27476816 ttgggacttaggagtgtgctcctcctcgagatctcaagtttgattctctctggtgccgatttaggtgggctaatttagc 27476738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 29753700 - 29753758
Alignment:
Q  182 cctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||||||||||||||||||||| ||||| ||||| || ||| || ||||||    
T  29753700 cctcctcaaggtctcaggttcgattctctctggtgccaatttaagagggttagtttagc 29753758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 31794309 - 31794231
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| |||||||| ||||||   ||||||||| ||| ||||  |||||| |||||||||||||||    
T  31794309 ttgggacttgggagtgtgctcctcctcaaggtctagagttcgattccctctggtgtcaatttgggtgggctaatttagc 31794231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 52029978 - 52029904
Alignment:
Q  166 gacctgggtgtgtggtcctcctcgaggtctcaggttcgattct-ctccggtgctaatttgagtgggctaatttag 239  Q
    ||||| || ||||| |||| ||| ||||||||||||||||||| | ||| ||| |||||| ||||||||||||||    
T  52029978 gacctaggagtgtgctccttctcaaggtctcaggttcgattctcccccgatgccaatttgggtgggctaatttag 52029904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 4566579 - 4566628
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 211  Q
    |||| ||||||| ||||| ||||||||  |||||||||||||||||||||    
T  4566579 ttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctc 4566628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 7766874 - 7766829
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    ||||||||||||||||||| ||| |||||||||||  |||||||||    
T  7766874 gaggtctcaggttcgattccctctggtgctaatttcggtgggctaa 7766829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 8077697 - 8077742
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  8077697 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 8077742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 9500502 - 9500457
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  9500502 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 9500457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 9964469 - 9964546
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||||| ||||| ||||| || ||||| | |||||||||| |||| ||||| ||||||||||   |||||||||||||    
T  9964469 ttgggatctgggagtgtgctcttcctcaatgtctcaggtttgattatctccagtgctaattttgatgggctaatttag 9964546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 15059549 - 15059504
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  15059549 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 15059504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 18646903 - 18646948
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  18646903 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 18646948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 40814440 - 40814375
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| || |||| ||||| |||||||||||||||||  |||  ||||| ||||||||||||||||    
T  40814440 gtgtgctcatccttgaggtttcaggttcgattctctctagtgtcaatttaagtgggctaatttagc 40814375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 51281395 - 51281444
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttg 224  Q
    ||||| |||||||| |||||||||||| |||||||||||| || ||||||    
T  51281395 gtgtgctcctcctcaaggtctcaggtttgattctctccggcgccaatttg 51281444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 19528359 - 19528319
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggt 215  Q
    ||||| |||||||| |||||||||||||||||||| |||||    
T  19528359 gtgtgctcctcctcaaggtctcaggttcgattctccccggt 19528319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 24047139 - 24047071
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||| ||||| ||||||||||||| ||| ||||||||||| || |||| |||||  || ||||||||||    
T  24047139 tgggagtgtgctcctcctcgaggtttcaagttcgattctccccagtgccaatttaggttggctaattta 24047071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 26232393 - 26232349
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgcta 219  Q
    ||||| ||||||| |||||||||||||| ||||||||| ||||||    
T  26232393 gtgtgctcctccttgaggtctcaggttcaattctctccagtgcta 26232349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 29738251 - 29738307
Alignment:
Q  184 tcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| || ||||| ||||||||||||||| ||||||||||  |||| |||||||||    
T  29738251 tcctcaagatctcaagttcgattctctccgatgctaatttggatgggttaatttagc 29738307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 45235425 - 45235345
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcagg-ttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||| |||| ||||| ||||||||||| |||||   ||| |||||||||| |||| ||||  |||||||||||||||    
T  45235425 tttgggacttgggagtgtgctcctcctcgagatctcaaacttctattctctccgatgctgatttaggtgggctaatttagc 45235345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 52336819 - 52336743
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||| ||||| ||||| |||||||  || |||||||||||||| |||| ||||  ||||||  ||||||||||||    
T  52336819 ttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctggtgtcaatttggatgggctaattta 52336743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 42327440 - 42327361
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagca 241  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||||    
T  42327440 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtgggctaatttagca 42327361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 18488396 - 18488315
Alignment:
Q  75 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||  || |||| ||||||||||||||||||||||| |||||    
T  18488396 ttgagcgtcctctctagtacaccttgtgcttcagaggcgtctcaattattgttaatatattccattttagtttcttcaaaaa 18488315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 19244140 - 19244217
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||||||||| | ||||| |||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  19244140 ttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaatttgagtgggctaatttag 19244217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 12086174 - 12086096
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||  ||||| |||||||| ||||||| |||||||||| |||||||||||||||  |||||||||||||||    
T  12086174 ttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattccctccggtgctaatttaggtgggctaatttagc 12086096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 37480106 - 37480184
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||| | ||||| |||||||| |||||||||||||||||||| ||||| | |||||| |||||||||||||||    
T  37480106 ttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtgggctaatttagc 37480184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 42602585 - 42602663
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| |||| ||| |||||| ||||| ||||||||||||||| |||||| |||||||||||||||    
T  42602585 ttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtgggctaatttagc 42602663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 42860383 - 42860455
Alignment:
Q  166 gacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||||| ||||| ||||||||||||||||| ||||||||| |  |||||||| ||||||||||||||||||    
T  42860383 gacctgggagtgtgctcctcctcgaggtctcaagttcgattcccgtcggtgctagtttgagtgggctaattta 42860455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 21213800 - 21213871
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 233  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  21213800 ttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctccccggtgccaatttaggtgggcta 21213871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 29503301 - 29503379
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||  ||||| ||||||| ||||||||    
T  29503301 tttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc-ccggtgtcaatttaagtgggcaaatttagc 29503379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 33569890 - 33569828
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattt 237  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  33569890 gtgtgctcttcctcgaggtctcaggttcgattctctctggtgctaatttaagtggactaattt 33569828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 39715023 - 39715101
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||| || |  | |||||  |||||||||||||||    
T  39715023 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagcaccaatttaggtgggctaatttagc 39715101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 25637181 - 25637258
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||| ||||| ||||| |||| |||||||||||||||||| ||||||||| ||| |||||  |||||||||||||    
T  25637181 tttgggatctgggagtgtgctccttctcgaggtctcaggttcggttctctccgatgccaatttaggtgggctaattta 25637258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 2311774 - 2311830
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattt 237  Q
    |||||||||||||||||||||||||| ||| |||||  |||||||||||||||||||    
T  2311774 tcctcctcgaggtctcaggttcgattttcttcggtgtcaatttgagtgggctaattt 2311830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 27244337 - 27244417
Alignment:
Q  160 atttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||||| || || ||||||||||||| | |||||||||||||| | ||| |||||| |||| |||||||||||    
T  27244337 atttgggacctgggagtatgctcctcctcgaggtttaaggttcgattctcttcagtgttaatttaagtgagctaatttagc 27244417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 7799080 - 7799003
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| ||||||||||| |||||| ||||||||||||| |||| ||||| ||| ||||||||||||    
T  7799080 ttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaatttaagt-ggctaatttagc 7799003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 19016070 - 19016140
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| ||||| ||||||||||||||||| ||| ||||||| ||||||| ||||| ||| ||||||||||||    
T  19016070 tgggagtgtgctcctcctcgaggtctcaagtttgattctccccggtgccaatttaagtaggctaatttagc 19016140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 37756016 - 37755938
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||||||  |||| |||| |||||||||||| |||||| || ||| | ||| ||||||||||||||||||||||    
T  37756016 ttgggacctgggaatgtgctcctactcgaggtctcaagttcgactccctctgatgccaatttgagtgggctaatttagc 37755938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 23140957 - 23140896
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    ||||||| |||||||||| |||||||| | ||||| ||||||||||||||| ||||||||||    
T  23140957 ttgggacatgggtgtgtgttcctcctcaatgtctctggttcgattctctccagtgctaattt 23140896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 23552747 - 23552686
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    ||||||| |||||||||| |||||||| | ||||| ||||||||||||||| ||||||||||    
T  23552747 ttgggacatgggtgtgtgttcctcctcaatgtctctggttcgattctctccagtgctaattt 23552686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 4262347 - 4262295
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccgg 214  Q
    |||||||||||  ||||| |||||||| |||||||||||||||||||||||||    
T  4262347 ttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattctctccgg 4262295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 37971956 - 37972004
Alignment:
Q  192 gtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||||||||||||||||| |||||  |||||||||||||||    
T  37971956 gtctcaggttcgattctctccggtgccaatttaggtgggctaatttagc 37972004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 2295962 - 2296021
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||||||||| ||||||| ||| |||||  ||||||| ||||||||||||||    
T  2295962 tcctcctcgaggtctcagattcgattttcttcggtgtcaatttgaatgggctaatttagc 2296021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 14500315 - 14500386
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||| |||||||| ||||||||| |||||||||||| ||||| |||||||| ||| || ||||||    
T  14500315 ctgggagtgtgctcctcctctaggtctcagattcgattctctctggtgccaatttgagggggatagtttagc 14500386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 33839306 - 33839243
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttg 224  Q
    |||||||| |||| ||||| |||||||| ||||||||||||| ||||| || ||||||||||||    
T  33839306 tttgggacatgggagtgtgctcctcctcaaggtctcaggttcaattctttctggtgctaatttg 33839243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 14780565 - 14780615
Alignment:
Q  190 aggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||||||| ||| ||| ||| ||||||||||||||||||||||    
T  14780565 aggtctcaggttcgatcctccccgatgccaatttgagtgggctaatttagc 14780615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 41504981 - 41504903
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| || || ||||||||||  |||| | |||||||||||||||||  ||||| |||||| |||||||||    
T  41504981 ttgggacctgggagtatgctcctcctcgatatctccgattcgattctctccggtgtcaatttaagtgggttaatttagc 41504903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 23052568 - 23052491
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||||| |||| ||||| | |||||| |||||||||||||||||||| |  |||| | |||| ||||||||||||||    
T  23052568 ttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctccctagtgccagtttgggtgggctaatttag 23052491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 33582004 - 33582053
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 211  Q
    |||||||||| | ||||| ||||||| |||||||||||||||||||||||    
T  33582004 ttgggacctgagagtgtgctcctccttgaggtctcaggttcgattctctc 33582053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 360775 - 360711
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||| |||||||| | ||||||||||| ||||||| ||||| ||||||| ||||| ||||||||    
T  360775 gtgtgctcctcctctacgtctcaggttcaattctcttcggtgttaatttgggtgggttaatttag 360711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 28846722 - 28846766
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgatt 206  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||    
T  28846722 ttgggacctgggagtgtgctcctcctcgatgtctcaggttcgatt 28846766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 29197421 - 29197345
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||| |||| ||||| ||||||| || |||||| ||||||||||  ||||||| |||||  |||||||||||||    
T  29197421 ttgggacttgggagtgtgctcctccttgatgtctcatgttcgattcttcccggtgccaatttaggtgggctaattta 29197345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 42922445 - 42922509
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcga-ggtctcaggttcgattctctccggtgctaatttga 225  Q
    |||| ||||||| ||||| |||||||| | ||||||||||||||||||||| ||||| |||||||    
T  42922445 ttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctggtgccaatttga 42922509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 26482124 - 26482198
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattt 237  Q
    ||||||||| || ||||| ||||| || ||||||||||||||||||||  | |||| ||||| |||||||||||||    
T  26482124 ttgggacctaggagtgtgctcctc-tcaaggtctcaggttcgattctcctcagtgccaatttcagtgggctaattt 26482198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 32687511 - 32687558
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattct 208  Q
    |||||||| || | ||||| ||||||||||||||||||||||||||||    
T  32687511 tttgggacttgagagtgtgttcctcctcgaggtctcaggttcgattct 32687558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 40416435 - 40416372
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttga 225  Q
    |||| ||||||| || || |||||||  |||||||||||||||||||||| ||||| |||||||    
T  40416435 ttggaacctgggagtatgctcctccttaaggtctcaggttcgattctctctggtgccaatttga 40416372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 21195713 - 21195643
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| ||||| |||||||| |||||||||||||||||| |||  |||  ||||||  ||||||||||||||    
T  21195713 tgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagc 21195643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 1435116 - 1435172
Alignment:
Q  183 ctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||||||| |||||||||||| ||||  |||||| |||||||||||||||    
T  1435116 ctcctcaaggtctcag-ttcgattctctctggtgtcaatttgggtgggctaatttagc 1435172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 9318092 - 9318043
Alignment:
Q  190 aggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||||||||||||||||||||| | ||| |||| | ||||||||||||||    
T  9318092 aggtctcaggttcgattctctctgatgccaattcgggtgggctaatttag 9318043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 12994421 - 12994345
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||||||||||| ||||| |||||||  |||||||| ||||||||| | ||||||  ||| ||||||| |||||||||    
T  12994421 ttgggacctgggagtgtgctcctccttaaggtctcaagttcgattc-caccggtgtcaatatgagtggactaatttag 12994345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 19322798 - 19322863
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    ||||||||||||| ||||| ||||| || ||||||| |||| |||||||||  |||| ||||||||    
T  19322798 tttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctctagtgccaatttgag 19322863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 34041620 - 34041555
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| |||||||| |||||||||||| ||||| ||| ||||| |||||||| ||| || ||||||    
T  34041620 gtgtgctcctcctcaaggtctcaggtttgattccctctggtgccaatttgagggggttagtttagc 34041555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 3001423 - 3001487
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||| ||||||| ||| |||||||||||||| |||| ||||| | |||  ||||||||||||||    
T  3001423 gtgtgctcctccttgagatctcaggttcgattatctctggtgccagtttatgtgggctaatttag 3001487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 11251118 - 11251194
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||| |||  ||||| |||||||| |||||||||||| ||||||||| ||||  |||||  ||| |||||||||    
T  11251118 ttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctggtgtcaatttaggtgtgctaattta 11251194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 16951429 - 16951485
Alignment:
Q  182 cctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||| |||||||||||||||||||||||| |  |||||||||   ||||||||||||    
T  16951429 cctcatcgaggtctcaggttcgattctcttcaatgctaatttagatgggctaattta 16951485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 17022094 - 17022150
Alignment:
Q  182 cctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||| |||||||||||||||||||||||| |  |||||||||   ||||||||||||    
T  17022094 cctcatcgaggtctcaggttcgattctcttcaatgctaatttagatgggctaattta 17022150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 968393 - 968471
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||  |||||||||||||||    
T  968393 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtgggctaatttagc 968471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 28597647 - 28597728
Alignment:
Q  76 tgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaac 157  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||||||||||||||| |||||| ||||||    
T  28597647 tgagcgtcctctttagtacactttgtgcttaagaggcgtctctgttattgtttatatattccattttaatttcttcaaaaac 28597728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 29431042 - 29431120
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| ||||||| |||| |||||||||||||||||  ||||||||||||||||||||||||||||    
T  29431042 ttgggacttgggagtgtgctcctccttgaggcctcaggttcgattctctttggtgctaatttgagtgggctaatttagc 29431120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 2203523 - 2203601
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| |||||||| |||||||||| || |||||| ||||||| |||||| |||||||||||||||    
T  2203523 ttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggctaatttagc 2203601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 23554431 - 23554293
Alignment:
Q  19 tgtttgggtattggttgatgctagtattttgtaattacttgtcagactctttgtaa-ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctc 117  Q
    |||||||||||| | ||| ||| || ||||||||||| || ||||||   |||||  || | |||||||||||||||| || ||||||||||||||||||    
T  23554431 tgtttgggtattagctgacgctcgttttttgtaattatttatcagacatcttgtatctttaccgtcctctttagtacacctcgtgcttaagaggcgtctc 23554332  T
Q  118 tgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
      ||||| | ||| ||||||||||||||||| |||||||    
T  23554331 catttttattaatgtattccattttagtttcctaaaaaa 23554293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 18540329 - 18540407
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||  | |||||| |||||||||||||||||||||| ||||| |||||||| ||| |||||||||    
T  18540329 ttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagagggttaatttagc 18540407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 28783095 - 28783169
Alignment:
Q  166 gacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||| ||||| |||||||| |||||||| |||||||||||  |||||| |||||| |||||||||||||||    
T  28783095 gacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggtgggctaatttagc 28783169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 29858094 - 29858016
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||||| |  |||||| |||||  |||||||||||||||    
T  29858094 ttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattcccctcggtgccaatttaggtgggctaatttagc 29858016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 16852371 - 16852418
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 209  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  16852371 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16852418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 30774782 - 30774703
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| ||||  ||||| |||||||||||||||||| ||||||| |||||| ||| ||||| |||| |||||||||||    
T  30774782 tttgggatctggaagtgtgttcctcctcgaggtctcagattcgattttctccgatgccaatttaagtgagctaatttagc 30774703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 3624611 - 3624688
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| ||||| || ||||||||||||||||||||||||| |  |||||  |||||||||||||||    
T  3624611 ttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctccgg-gtcaatttaggtgggctaatttagc 3624688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 6536551 - 6536629
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| || ||||| |||||||| ||||||||||||| |||||||| ||||| |||||  ||||| |||||||||    
T  6536551 ttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagc 6536629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 8485030 - 8485108
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||| | ||||| ||||| | |||||||||  |||||||||||||||||| |||||  |||||||||||||||    
T  8485030 ttgggacctgtgagtgtgctcctctttgaggtctcattttcgattctctccggtgccaatttaggtgggctaatttagc 8485108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 11819807 - 11819885
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| |||||||| |||||||||||||||||| |||  |||  |||||| |||||||||||||||    
T  11819807 ttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttgggtgggctaatttagc 11819885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 11852150 - 11852216
Alignment:
Q  90 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    |||||| ||||||||||| ||||||||| ||| || | ||||||||||||| |||||||||||||||    
T  11852150 agtacaccttgtgcttaaaaggcgtctcggttgttattaatatattccattatagtttcttaaaaaa 11852216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 35690109 - 35690035
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 236  Q
    |||||| |||||||| || |||||||| |||||||||||||||||||||| ||||  ||||| ||| ||||||||    
T  35690109 ttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaagtaggctaatt 35690035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 7140740 - 7140815
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||| ||||||||||| ||||||||||| |||||| ||||||||||| ||||   |||||| |||||||||||||    
T  7140740 ttgggatctgggtgtgtgctcctcctcgagctctcagattcgattctct-cggtatcaatttgggtgggctaattta 7140815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 33017245 - 33017309
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    |||| ||||||  ||||| |||||||| |||||||||||||||||||||| ||||| ||||||||    
T  33017245 ttggaacctggaagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgag 33017309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 11492111 - 11492040
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||| |||| |||||||||| |||||||||||||| | |||  |||||| |||||||||||||||    
T  11492111 ctgggagtgtgctccttctcgaggtcttaggttcgattctcttcagtgtcaatttgggtgggctaatttagc 11492040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 44780159 - 44780081
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| |||||||| |||||||||||| ||||| |||  |||  |||||| |||||||||||||||    
T  44780159 ttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttgggtgggctaatttagc 44780081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 23361686 - 23361617
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||| ||||| |||||||| ||||||||||||| |||||||| ||||  |||||  ||||||||||||||    
T  23361686 tgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaatttaggtgggctaatttag 23361617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 31087283 - 31087227
Alignment:
Q  182 cctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||||||||||||||||||||| |||||||||  ||||| | | ||||||||||    
T  31087283 cctcctcgaggtctcaggttcgattatctccggtgtcaatttaaataggctaattta 31087227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 35287760 - 35287824
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||| |||||||| |||| ||| ||||||||||||||||||| |||||| |||| ||| |||||    
T  35287760 gtgtgctcctcctcaaggtatcatgttcgattctctccggtgccaatttgggtggactagtttag 35287824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 13129698 - 13129761
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttg 224  Q
    |||||||| |||| ||| | |||||||| |||| ||||||||||||||||| ||||| ||||||    
T  13129698 tttgggacttgggagtgcgctcctcctcaaggtttcaggttcgattctctctggtgccaatttg 13129761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 19703532 - 19703485
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 209  Q
    |||||||||| | ||||| |||||||| ||||||||||||||||||||    
T  19703532 ttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 19703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 22193409 - 22193358
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccg 213  Q
    ||||| |||||| ||||| |||||||| |||||| |||||||||||||||||    
T  22193409 ttggggcctgggagtgtgctcctcctcaaggtcttaggttcgattctctccg 22193358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 43594349 - 43594286
Alignment:
Q  176 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||| |||||||| ||||||||||||||||||||||  |||  ||||||  |||||||||||||    
T  43594349 tgtgttcctcctcaaggtctcaggttcgattctctctagtgtcaatttggatgggctaatttag 43594286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 18546409 - 18546355
Alignment:
Q  160 atttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccgg 214  Q
    |||||||||||| | |  || ||||||||||||||||||||||||||||| ||||    
T  18546409 atttgggacctgagagcatgctcctcctcgaggtctcaggttcgattctcaccgg 18546355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 27750761 - 27750839
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| |||||||| |||||||||||||||||| |||  |||  ||||||  ||| ||||||||||    
T  27750761 ttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatggactaatttagc 27750839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 31843850 - 31843896
Alignment:
Q  192 gtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||||||||||| |||| | ||||||||||||| ||||||||||    
T  31843850 gtctcaggttcgattttctctgatgctaatttgagtaggctaattta 31843896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 33694138 - 33694072
Alignment:
Q  90 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    |||||| ||||| ||||| |||||||||  || || | ||||||||||||||||||||||| |||||    
T  33694138 agtacaccttgtacttaaaaggcgtctcgattgttattaatatattccattttagtttcttcaaaaa 33694072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 35641938 - 35641896
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctcc 212  Q
    |||| ||||| |||||||||| |||||||||||||||||||||    
T  35641938 tgggagtgtgctcctcctcgatgtctcaggttcgattctctcc 35641896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 3305234 - 3305157
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||| ||||| | ||| |||||||| ||||||||  ||||||| |||| ||||| |||||  |||||||||||||    
T  3305234 tttgggatctgggagcgtgctcctcctcaaggtctcaaattcgattatctctggtgccaatttaggtgggctaattta 3305157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 11928763 - 11928730
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattct 208  Q
    ||||| ||||||||||||||||||||||||||||    
T  11928763 gtgtgctcctcctcgaggtctcaggttcgattct 11928730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 33727905 - 33727840
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| |||||||| |||||||||||||||||| |||  |||  ||||||  ||||||||||||||    
T  33727905 gtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagc 33727840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 12988459 - 12988523
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    |||| ||||||  ||||| |||||||| |||| ||||||||||| ||||| ||||| ||||||||    
T  12988459 ttggaacctggaagtgtgctcctcctcaaggtttcaggttcgatcctctctggtgccaatttgag 12988523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 15948094 - 15948018
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||| |||| || || |||||||||| |||  |||||||||||||||| |||  | ||| ||||||||||||||    
T  15948094 ttgggacttgggagtatgctcctcctcgatgtcataggttcgattctctccagtgtcattttaagtgggctaattta 15948018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 16317671 - 16317719
Alignment:
Q  192 gtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||||||||||| ||||| ||||| ||||||||| ||||||    
T  16317671 gtctcatgttcgattctctctggtgccaatttcagtgggctagtttagc 16317719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 28540466 - 28540514
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    ||||| |||| ||| ||||||||||||| ||||||||| ||||||||||    
T  28540466 gtgtgctccttctctaggtctcaggttcaattctctcctgtgctaattt 28540514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 6385893 - 6385971
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||||||  |||| |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6385893 ttgggacctgggactgtgctcctccttaaggtctcaggttcgattctctccggtgctaatttgggtgggctaatttagc 6385971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 31623036 - 31622958
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| ||||||||||||||||||||| || || ||||||||  |||||| |||||||||||||||    
T  31623036 ttgggacctgggagtgtgctcctcctcgaggtctcaggtttgaatcactccggtgtcaatttgggtgggctaatttagc 31622958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 33549135 - 33549213
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||| |||||  ||| |||||||||||    
T  33549135 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgagctaatttagc 33549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 23910166 - 23910080
Alignment:
Q  152 aaaaacccatttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| |||||||||||| ||||| |||||||| ||||||||||||||| |||||  ||||| |||||||| ||| || ||||||    
T  23910166 aaaaacccacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgaatctct--ggtgccaatttgagggggttagtttagc 23910080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 20213072 - 20213150
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| |||||||| | |||||||||||||||| |||  |||  |||||| |||||||||||||||    
T  20213072 ttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagc 20213150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 22107095 - 22107173
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| |||||||| | |||||||||||||||| |||  |||  |||||| |||||||||||||||    
T  22107095 ttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagc 22107173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 34444834 - 34444912
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||  | ||||| |||||| | |||||||||||||||||||| | || |||| ||||||||||||||||||||    
T  34444834 ttgggaccttagagtgtgctcctccccaaggtctcaggttcgattctccctggagctagtttgagtgggctaatttagc 34444912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 902845 - 902926
Alignment:
Q  75 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||   |||||| | | ||||||||||||  |||||||||||    
T  902845 ttgagcgccctctttagtacaccttgtgcttaaggggcgtctccacttttgttagtttattccattttaacttcttaaaaaa 902926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 8597773 - 8597714
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||| |||||||| |||| ||||||||| |||| |||||| |||||||||||||||    
T  8597773 tcctcctcaaggtctcaagttcaattctctccagtgccaatttgggtgggctaatttagc 8597714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 24334051 - 24333992
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||| ||||||||||||| |||||| ||||||| |||||| |||||||| ||||||    
T  24334051 tcctcctcaaggtctcaggttcaattctcaccggtgccaatttgggtgggctagtttagc 24333992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 30127438 - 30127509
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||| ||||| |||||||||||||||||||||| |||||||| |||||  || || |||||||||    
T  30127438 ctgggagtgtgctcctcttcgaggtctcaggttcgattctttccggtgccaatttaggtaggttaatttagc 30127509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 2484781 - 2484827
Alignment:
Q  192 gtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||    
T  2484781 gtctgaggttcgattctctccggtgtcaatttgagtgggctaattta 2484827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 3172813 - 3172735
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| || || ||||| |||||||||||| ||||||| |||   ||| ||||||| |||||||||||||||    
T  3172813 ttgggacctgggagtatgctcctcatcgaggtctcagattcgattttctttagtgttaatttgggtgggctaatttagc 3172735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 12188348 - 12188270
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| |||||||| |||| ||| |||||||||||||  |||| |||||||| ||| || ||||||    
T  12188348 ttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaatttgagggggttagtttagc 12188270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 12234552 - 12234502
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctcc 212  Q
    |||||||||||| ||||| |||  |||||||||||||||||||||||||||    
T  12234552 ttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctcc 12234502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 14557993 - 14558070
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||  ||||| ||||||||  ||||||||||||||||||| ||||||  |||||| |||| ||||||||||    
T  14557993 ttgggacctggaagtgtgctcctcctccgggtctcaggttcgattctc-ccggtgtcaatttgggtggtctaatttagc 14558070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 32250866 - 32250817
Alignment:
Q  191 ggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||||||||||||||||||||  ||||| |||||| |||||||||    
T  32250866 ggtctcaggttcgattctctccggtgacaatttaagtgggttaatttagc 32250817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 16405115 - 16405163
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 209  Q
    ||||||||||||| ||||| | |||||||||||||||| ||||||||||    
T  16405115 tttgggacctgggagtgtgcttctcctcgaggtctcagtttcgattctc 16405163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 9626082 - 9626117
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtg 216  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9626082 tcctcctcgaggtctcatgttcgattctctccggtg 9626117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 10338219 - 10338141
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| || ||||| |||||||| |||||||||||||||||| | || |||  || |||| || |||||||||||    
T  10338219 ttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattccccccagtgtcaacttgattgagctaatttagc 10338141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 11306191 - 11306141
Alignment:
Q  190 aggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||||||||||||| ||||| |||||||| ||| || ||||||    
T  11306191 aggtctcaggttcgattctctctggtgccaatttgagggggttagtttagc 11306141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 19162814 - 19162864
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctcc 212  Q
    |||||||  ||| ||||| ||||||||||| ||||||||||||||||||||    
T  19162814 ttgggacacgggagtgtgctcctcctcgagatctcaggttcgattctctcc 19162864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 1344985 - 1345030
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    ||||||||||||||||||| ||| ||||| ||||| ||||||||||    
T  1344985 gaggtctcaggttcgattccctctggtgccaatttcagtgggctaa 1345030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 6691568 - 6691535
Alignment:
Q  190 aggtctcaggttcgattctctccggtgctaattt 223  Q
    |||||||||||||||||||||||||||| |||||    
T  6691568 aggtctcaggttcgattctctccggtgccaattt 6691535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 11448921 - 11448966
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  11448921 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 11448966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 12216774 - 12216823
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctct 210  Q
    ||||||||||| |  |||| |||| |||||||||||||||||||||||||    
T  12216774 tttgggacctgcgaatgtgctccttctcgaggtctcaggttcgattctct 12216823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 18263892 - 18263949
Alignment:
Q  183 ctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| |||||| |||||||||||||| || |||| |||||  |||||||||||||||    
T  18263892 ctccttgaggtcccaggttcgattctccccagtgccaatttaggtgggctaatttagc 18263949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 28363967 - 28364044
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||| ||| | ||||| |||||||| ||||||||| ||||||| |||| ||||  ||||||  ||||||||||||    
T  28363967 tttgggatctgcgagtgtgctcctcctcaaggtctcagattcgattatctctggtgtcaatttggatgggctaattta 28364044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 28841458 - 28841499
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtg 216  Q
    ||||| |||||||| |||||||| ||||||||||||||||||    
T  28841458 gtgtgctcctcctcaaggtctcaagttcgattctctccggtg 28841499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 346562 - 346637
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||||||||  ||||| | ||||||||||||||| ||||||||||| || |||  ||||| ||| ||||||||||    
T  346562 ttgggacctgga-gtgtgcttctcctcgaggtctcatgttcgattctcacccgtgtcaatttaagtaggctaattta 346637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 10650072 - 10650008
Alignment:
Q  174 tgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||| ||||| || |||||||||||| ||||||||||||||| |  ||||  |||||||||||    
T  10650072 tgtgtgctcctcttcaaggtctcaggtttgattctctccggtgccagcttgaacgggctaattta 10650008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 11103480 - 11103404
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||| |||  ||||| |||||||  ||||||| | |||||||||||| ||||| ||||| |||| |||||||||    
T  11103480 ttgggacttggtagtgtgctcctccttaaggtctccgattcgattctctctggtgccaatttaagtgagctaattta 11103404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 11423618 - 11423674
Alignment:
Q  183 ctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||||||||||||||||||||||| ||||| |||  ||||||  ||| |||||||||    
T  11423618 ctcctcgaggtctcaggttcgattttctccagtgtcaatttgtatggactaatttag 11423674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 24641235 - 24641159
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||| ||||| ||||| ||||||||||||| | |||||||||||||  |  ||| |||||  |||||||||||||    
T  24641235 ttgggatctgggagtgtgctcctcctcgaggtttaaggttcgattctcctcactgccaatttaggtgggctaattta 24641159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 37274504 - 37274426
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| |||||||| |||||| ||||||||||||||| ||||||||||| ||||||||||||||||    
T  37274504 ttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtgggctaatttagc 37274426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 26442693 - 26442825
Alignment:
Q  19 tgtttgggtattggttgatgctagtattttgtaattacttgtcagactctttgtaa-ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctc 117  Q
    ||||||||||| || ||| ||| || ||||||||||| ||| || ||   |||||| |||||||||||||||||||||  ||||||||||||||| ||||    
T  26442693 tgtttgggtatcggctgaagctcgttttttgtaattatttgacaaacatcttgtaacttgagcgtcctctttagtacacgttgtgcttaagaggcatctc 26442792  T
Q  118 tgtttttgtcaatatattccattttagtttctt 150  Q
     ||| |||| |||||||| ||||||||||||||    
T  26442793 cgttattgttaatatatttcattttagtttctt 26442825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 19238622 - 19238544
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| |||||||||||||||| |||||||||||| ||||| | |||||| |||||||||||||||    
T  19238622 ttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctccccggtaccaatttgggtgggctaatttagc 19238544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 23377987 - 23378065
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||||||||  |||| |||||||| |||||| ||||||    
T  23377987 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggggctagtttagc 23378065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 28635727 - 28635805
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| ||||||| ||||||| ||||||||||||||| ||||| |||||| |||||||||||||||    
T  28635727 ttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtgggctaatttagc 28635805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 55427245 - 55427167
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| || || |||| ||||||||||||||||||||||||  |||||| |||||| |||||||||||||||    
T  55427245 ttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctccgcggtgccaatttgggtgggctaatttagc 55427167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 35420220 - 35420301
Alignment:
Q  75 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    |||||||||||||||| |||| ||||||||||||||||| ||| ||| || | ||||||||||||||| |||||| ||||||    
T  35420220 ttgagcgtcctctttaatacaccttgtgcttaagaggcgcctcagttgttattaatatattccattttcgtttctaaaaaaa 35420301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 37109396 - 37109319
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||||| ||||| |||||||| ||| || |||||    
T  37109396 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttag 37109319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 7949499 - 7949421
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| || ||||| |||||||| |||||||||||||||||||||| ||||  |||||  |||||||||||||||    
T  7949499 ttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtgggctaatttagc 7949421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 46295128 - 46295206
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| | || ||||| |||||||| |||||||||||||||||||| ||||||| |||||| |||||||| ||||||    
T  46295128 ttgggacattggagtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaatttgggtgggctagtttagc 46295206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 51954145 - 51954223
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| || || ||||||||||||||||||||| |||| |||||||||  |||||| |||||||||||||||    
T  51954145 ttgggacttgggagtatgctcctcctcgaggtctcaggtttgattatctccggtgtcaatttgggtgggctaatttagc 51954223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 2732044 - 2732103
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||| | |||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  2732044 tcctcctcaaagtctcaggttcgattctctccggtgccaatttgggtgggctagtttagc 2732103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 32992643 - 32992721
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||| || ||||| |||||||| |||||||| ||||||||||| ||||||  ||||||||||| ||| ||||||    
T  32992643 ttgggaccttggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgtcaatttgagtggactagtttagc 32992721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 38869799 - 38869877
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| |||||||| |||||||||||||||||| ||| ||||| |||||||| ||| || ||||||    
T  38869799 ttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaatttgagggggttagtttagc 38869877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 39509101 - 39509179
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||| || |||  |||||  ||||| |||||||||    
T  39509101 ttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaatttaggtgggttaatttagc 39509179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 51250567 - 51250489
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| ||| |||| || ||||| ||||||||| ||||||||| |||||| |||||||||||||||    
T  51250567 ttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtgggctaatttagc 51250489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 2622440 - 2622379
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    |||||||||||| ||||| |||||||| | |||||||||||||||||||| ||||| |||||    
T  2622440 ttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctctggtgccaattt 2622379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 46329195 - 46329272
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||||||||||| ||||| |||||||| |||| ||||||||||||||  ||||||| |||||| ||  ||||||||||    
T  46329195 ttgggacctgggagtgtgctcctcctcaaggtatcaggttcgattcttcccggtgccaatttgggtaagctaatttag 46329272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 51622529 - 51622594
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| |||||||| ||||||||||||||| |||||| ||||| |||||| |||||| ||||||||    
T  51622529 gtgtgctcctcctcaaggtctcaggttcgactctctctggtgccaatttgggtgggccaatttagc 51622594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 19229239 - 19229175
Alignment:
Q  176 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| ||||||||||||||||||||||||||||| | ||| | |||||| ||||||| |||||||    
T  19229239 tgtgctcctcctcgaggtctcaggttcgattctccctggtaccaatttgggtgggcttatttagc 19229175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 37338833 - 37338750
Alignment:
Q  75 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtca--atatattccattttagtttcttaaaaaa 156  Q
    ||||| |||||||||||||  ||||||||| | |||| |||||||||| ||| |  |||||||||||||| |||||||||||||    
T  37338833 ttgagagtcctctttagtatgtcttgtgctaaggaggtgtctctgtttgtgtaaatatatattccatttttgtttcttaaaaaa 37338750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 43124670 - 43124729
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||||||||||| |||||||||| ||| | |||  ||||||||||||||||||||||    
T  43124670 tcctcctcgaggtcttaggttcgattttcttcagtgtcaatttgagtgggctaatttagc 43124729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 2185077 - 2184999
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| ||||||| ||||| |||| ||| | |||||||||||||||||||||| ||| |||||||| ||| || ||||||    
T  2185077 ttggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctccgatgccaatttgagggggttagtttagc 2184999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 7292843 - 7292765
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| ||||||| ||||| |||||||| | ||||||||||||||||||||  |||| |||||||| ||| || ||||||    
T  7292843 ttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaatttgagggggttagtttagc 7292765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 8030249 - 8030171
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| |||||||| |||||||| ||||||||| |||  |||  |||||| |||||||||||||||    
T  8030249 ttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttgggtgggctaatttagc 8030171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 13015458 - 13015536
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| |||||||||| |||||| ||||||||||||| ||||  |||||  ||||| |||||||||    
T  13015458 ttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtcaatttaggtgggttaatttagc 13015536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 27105043 - 27104997
Alignment:
Q  192 gtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||    
T  27105043 gtctgaggttcgattctctccggtgtcaatttgagtgggctaattta 27104997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 45658481 - 45658415
Alignment:
Q  90 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    |||||| ||||||||||| ||| ||||| ||| || | ||||||||||||||||||||||| |||||    
T  45658481 agtacaccttgtgcttaaaaggtgtctcagttgttattaatatattccattttagtttcttcaaaaa 45658415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 4249221 - 4249286
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| |||||||| |||||||||||| ||||||||| ||||| |||||||| ||| || ||||||    
T  4249221 gtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttgagggggttagtttagc 4249286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 20770949 - 20771018
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||| |||||| |||| ||| |||||||| ||||||||||||| ||||| |||||||| ||| |||||||    
T  20770949 ctggatgtgtgttccttctcaaggtctcaagttcgattctctcaggtgccaatttgagggggttaattta 20771018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 30256282 - 30256201
Alignment:
Q  75 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    ||||||| ||||||||  ||  |||||||||||| | |||||| ||| |||| ||||||| ||||||||| |||||||||||    
T  30256282 ttgagcgacctctttaacacgccttgtgcttaagtgacgtctccgttattgtgaatatataccattttagcttcttaaaaaa 30256201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 32662804 - 32662861
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||| |||||||||||||||||| ||| |||||  ||||| ||||||||||||||    
T  32662804 tcctccttgaggtctcaggttcgattttcttcggtgtcaatttaagtgggctaattta 32662861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 9517787 - 9517743
Alignment:
Q  190 aggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||    
T  9517787 aggtctcaggttcgattctctctggtgccaatttcagtgggctaa 9517743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 22096629 - 22096577
Alignment:
Q  186 ctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||||||||||||||||||||| |  |||| ||||| ||||||||||||||    
T  22096629 ctcgaggtctcaggttcgattctccctagtgccaatttaagtgggctaattta 22096577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 30938265 - 30938217
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 209  Q
    ||||||| || || ||||| |||||||||||||||||||||||||||||    
T  30938265 tttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 30938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 35644193 - 35644129
Alignment:
Q  176 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| |||||||| | ||||||||||||||||||   |||||||||||| |||| ||||||||||    
T  35644193 tgtgctcctcctcaacgtctcaggttcgattctccatggtgctaatttgggtggcctaatttagc 35644129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 15729526 - 15729589
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||| |||||||||| |||||| ||||||||||| ||||||  ||||||| |||||| |||||    
T  15729526 gtgtgctcctcctcgatgtctcaagttcgattctcaccggtgtcaatttgattgggctgattta 15729589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 49576936 - 49576889
Alignment:
Q  165 ggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctcc 212  Q
    |||| |||| ||||| |||||||| |||||||||||||||||||||||    
T  49576936 ggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctcc 49576889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 4483346 - 4483268
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||| | || || |||||||| ||||||||||||| ||||| ||||||||   ||||||||| | ||||||||    
T  4483346 ttgggacctgagagtctgatcctcctcaaggtctcaggttcaattctttccggtgcctgtttgagtggacaaatttagc 4483268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 8325420 - 8325346
Alignment:
Q  166 gacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| || ||||| || ||||| |||||| ||||||||||||| ||||||  |||||| |||||||| ||||||    
T  8325420 gaccttggagtgtgctcatcctcaaggtcttaggttcgattctccccggtgtcaatttgggtgggctagtttagc 8325346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 9936998 - 9936928
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| ||||| |||||||||| || ||||||||||||||| ||| ||  |||||| ||||| |||||||||    
T  9936998 tgggagtgtgctcctcctcgaagtttcaggttcgattctcaccgttgtcaatttgggtgggttaatttagc 9936928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 16581724 - 16581802
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| ||||||| || || |||||||| ||||||||||||| ||| |||| ||||| |||||||| ||| || ||||||    
T  16581724 ttggaacctgggagtctgctcctcctcaaggtctcaggttctattatctctggtgccaatttgagagggttagtttagc 16581802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 33619252 - 33619298
Alignment:
Q  177 gtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    ||||||||||| ||||||| |||||||||||||| |||||| |||||    
T  33619252 gtggtcctccttgaggtcttaggttcgattctcttcggtgccaattt 33619298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 38838847 - 38838905
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||||||| |||||| ||||||||||||||||| ||  |||||  ||||||||||||||    
T  38838847 tcctcctcaaggtcttaggttcgattctctccgatggcaatttcggtgggctaatttag 38838905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 46174403 - 46174353
Alignment:
Q  188 cgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||||||||||||||| ||||||||| |||||||  ||| ||||||||    
T  46174403 cgaggtctcaggttcgattttctccggtgttaatttggatggactaattta 46174353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 49262702 - 49262652
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||||||||||||||||||| || |||| |||||  ||||||||||||||    
T  49262702 gaggtctcaggttcgattctccccagtgccaatttaggtgggctaatttag 49262652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 8034843 - 8034884
Alignment:
Q  192 gtctcaggttcgattctctccggtgctaatttgagtgggcta 233  Q
    ||||||||||| ||||| |||||||| |||||||||||||||    
T  8034843 gtctcaggttcaattctttccggtgccaatttgagtgggcta 8034884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 9693524 - 9693467
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||||| |||||||||||||||||| |||  |||  |||||| |||||||||||||    
T  9693524 tcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaattta 9693467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 15180790 - 15180847
Alignment:
Q  183 ctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| |||||| ||||||||||||||| ||||| |||||||| ||| || ||||||    
T  15180790 ctcctcaaggtcttaggttcgattctctctggtgccaatttgagggggttagtttagc 15180847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 19680833 - 19680772
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    ||||||| |||| ||||| || ||||| |||||| ||||||||||||||| ||||| |||||    
T  19680833 ttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctctggtgccaattt 19680772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 24124092 - 24124039
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    |||| ||||||||||||| ||||||| |||||||||| ||| |||||| |||||    
T  24124092 tgggagtgtggtcctccttgaggtctgaggttcgattatcttcggtgccaattt 24124039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 24827856 - 24827897
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcg 203  Q
    |||||||||||| ||| | |||||||||||||||||||||||    
T  24827856 ttgggacctgggagtgcgctcctcctcgaggtctcaggttcg 24827897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 34844905 - 34844860
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  34844905 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 34844860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 39927162 - 39927207
Alignment:
Q  193 tctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||| ||||||||||| ||| || |||||||||||||||||||||    
T  39927162 tctcatgttcgattctccccgatgttaatttgagtgggctaattta 39927207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 40058999 - 40058954
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  40058999 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 40058954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 49287908 - 49287953
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  49287908 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 49287953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 52983669 - 52983714
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    ||||||||||||||||||| ||| ||||| ||||| ||||||||||    
T  52983669 gaggtctcaggttcgattccctctggtgccaatttcagtgggctaa 52983714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 53496907 - 53496984
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||||||||| ||||| |||||||| | ||||||| || ||||||||| || || ||||||  ||| ||||||||    
T  53496907 tttgggacctgggagtgtgctcctcctcaaagtctcagatttgattctctctggagccaatttggttggactaattta 53496984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 1730534 - 1730470
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    |||||||||| | ||||| ||||| || | ||||||| ||| |||||||| ||||||||||||||    
T  1730534 ttgggacctgagagtgtgctcctcttcaaagtctcagattctattctctctggtgctaatttgag 1730470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 17618316 - 17618364
Alignment:
Q  166 gacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccgg 214  Q
    |||||||| ||||| ||||||||||||||||| ||||| ||| ||||||    
T  17618316 gacctgggagtgtgctcctcctcgaggtctcatgttcgtttccctccgg 17618364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 23284281 - 23284241
Alignment:
Q  184 tcctcgaggtctcaggttcgattctctccggtgctaatttg 224  Q
    |||||||||||||||||| |||||||||| ||| |||||||    
T  23284281 tcctcgaggtctcaggtttgattctctccagtgttaatttg 23284241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 37443751 - 37443807
Alignment:
Q  183 ctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||||||||| ||| |||||||| |||| ||||| |||||  ||||||||||||||    
T  37443751 ctcctcgaggtttcatgttcgattatctctggtgccaatttatgtgggctaatttag 37443807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 209
Target Start/End: Original strand, 47044767 - 47044795
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctc 209  Q
    |||||||||||||||||||||||||||||    
T  47044767 tcctcctcgaggtctcaggttcgattctc 47044795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 51948531 - 51948587
Alignment:
Q  182 cctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||||||||||||||||| ||||||||| |||  ||||| | ||| ||||||||    
T  51948531 cctcctcgaggtctcaggttcaattctctccagtgtcaatttaaatggactaattta 51948587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 15368 - 15290
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||| |||||  |||||||||||||||    
T  15368 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgggctaatttagc 15290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 16773838 - 16773916
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||| |||||  |||||||||||||||    
T  16773838 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtgggctaatttagc 16773916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 30109349 - 30109276
Alignment:
Q  166 gacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||| ||||| ||||||| ||||||||||||||||||| | |||||||||||||  |||||||||||||||    
T  30109349 gacctgggagtgtgctcctccttgaggtctcaggttcgattc-ccccggtgctaatttaggtgggctaatttagc 30109276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 14285192 - 14285256
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    |||| ||||||| ||||| |||||||| |||||||||||||||||||||| ||||| ||||||||    
T  14285192 ttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgag 14285256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 38299591 - 38299642
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  38299591 gaggtctcagattcgattttctccggtgctaatttgcgtgggctaatttagc 38299642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 84855 - 84933
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| |||||||| |||||||| ||||||||||| ||||||| | | || |||||||||||||||    
T  84855 ttgggatctgggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccattatgggtgggctaatttagc 84933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 29075812 - 29075890
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| ||||||||||| ||||| ||||||||||||| ||||| |||||   ||||||||||||||    
T  29075812 ttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatgggctaatttagc 29075890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 22020907 - 22020830
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    |||||| ||||| ||||| ||||||| || ||||||| ||||||||||||| ||| ||||||  ||||||||||||||    
T  22020907 ttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctccagtgttaatttaggtgggctaatttag 22020830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 27841051 - 27840986
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||||||||| |||| |||||||||||||| |||| |||||||  ||||||||||||||    
T  27841051 gtgtgctcctcctcgagatctccggttcgattctctctggtgttaatttggatgggctaatttagc 27840986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 34984837 - 34984901
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    |||| ||||||| ||||| |||||||| |||||| ||||||||||||||| ||||| ||||||||    
T  34984837 ttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgccaatttgag 34984901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 87461 - 87391
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||| |||||||| |||||||||||| ||||| |||| |||  ||||||||||||||||||||||    
T  87461 ctgggagtgtgctcctcctcaaggtctcaggtttgattc-ctccagtgtcaatttgagtgggctaatttagc 87391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 12877723 - 12877802
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||  |||| ||||| | |||||| | |||||||||||||||||||| ||| |||||||  |||||||||||||||    
T  12877723 tttgggatttgggagtgtgtttctcctcaatgtctcaggttcgattctctctggtactaatttaggtgggctaatttagc 12877802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 8278320 - 8278242
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| ||||||||||| ||||| ||| |||| ||||||||||  ||||  |||||||||||||||    
T  8278320 ttgggacttgggagtgtgctcctcctcgagatctcaagtttgattatctccggtgccgatttaggtgggctaatttagc 8278242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 14495850 - 14495772
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| ||||| ||||| |||||||||||||||||| || ||||||||||| ||| |||||   ||||||| ||||||    
T  14495850 ttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaatttagatgggctagtttagc 14495772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 21589319 - 21589397
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||| || || | |||||||| |||||||||||||||| ||| ||||| |||||  |||||||| ||||||    
T  21589319 ttgggacctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaatttaggtgggctagtttagc 21589397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 35705045 - 35705095
Alignment:
Q  190 aggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||||||||||| ||||||  |||||| |||||||||||||||    
T  35705045 aggtctcaggttcgattctccccggtgtcaatttgggtgggctaatttagc 35705095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 39327135 - 39327058
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| |||||||| |||||| || |||||||||||||  | |||||||| |||||||||||||||    
T  39327135 ttgggacatgggagtgtgctcctcctcaaggtcttagcttcgattctctccaatactaatttg-gtgggctaatttagc 39327058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 43442234 - 43442304
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttag 239  Q
    ||||| ||||| |||||||| |||||||||||||||||||||| | ||  ||||||  |||||||||||||    
T  43442234 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttggatgggctaatttag 43442304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 17155872 - 17155929
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    |||||||| |||||||||||| ||||||||  | ||| ||||||||||||||||||||    
T  17155872 tcctcctcaaggtctcaggtttgattctctgtgctgccaatttgagtgggctaattta 17155929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 29173534 - 29173599
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||||||||||| |||||||||||| |||| ||||  |||||  |||||||||||||||    
T  29173534 gtgtgctcctcctcgaggtttcaggttcgattatctctggtgtcaatttaggtgggctaatttagc 29173599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 4793134 - 4793094
Alignment:
Q  161 tttgggacctgggtgtgtggtcctcctcgaggtctcaggtt 201  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  4793134 tttgggacctgggagtgtgctcctcctcgaggtctcaggtt 4793094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 18974005 - 18974069
Alignment:
Q  176 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| |||||||| |||| ||||||||||||||| | ||||| |||||||||||| || ||||||    
T  18974005 tgtgctcctcctcaaggtgtcaggttcgattctccctggtgccaatttgagtgggttagtttagc 18974069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 25627096 - 25627152
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    |||| ||||| |||||||| |||||||||||||||||||||| ||||  ||||||||    
T  25627096 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttgag 25627152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 30000167 - 30000223
Alignment:
Q  182 cctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||||||||||||||||||| |||||| | ||| ||||| |||||| |||||||    
T  30000167 cctcctcgaggtctcaggttcgactctctctgatgccaatttaagtgggttaattta 30000223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 30883243 - 30883171
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    |||||||||||| ||||| |||||||| |||||||| |||| |||||| || |||  |||||| |||||||||    
T  30883243 ttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctcaccagtgtcaatttgggtgggctaa 30883171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 35360110 - 35360070
Alignment:
Q  183 ctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  35360110 ctcctcgaggtctcaggttcgattctcaccggtgccaattt 35360070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 15863250 - 15863316
Alignment:
Q  90 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 156  Q
    |||||| ||| ||||||| |||| |||| ||| || | |||||||||||||||||||||| ||||||    
T  15863250 agtacaccttatgcttaaaaggcatctcagttgttattaatatattccattttagtttctaaaaaaa 15863316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 17028309 - 17028231
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| |||| ||||| |||||||| |||||||||||| ||||| |||  |||  |||||  |||||||||||||||    
T  17028309 ttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttaggtgggctaatttagc 17028231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 35982719 - 35982797
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||||| || | ||||| |||||  ||| ||||||||||||||||| |||| ||||||||||  || |||||||||||    
T  35982719 ttgggacatgagagtgtgctcctctacgatgtctcaggttcgattctatccgatgctaatttggatgcgctaatttagc 35982797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 37258411 - 37258333
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||| || || ||||| |||||||| |||| ||||||||||||||||| ||||  |||||||| ||| || ||||||    
T  37258411 ttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaatttgagggggttagtttagc 37258333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 1279035 - 1279100
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||| ||||||||||| ||| ||||||||| ||||  |||||| |||| ||||||||||    
T  1279035 gtgtgctcctcatcgaggtctcaagttagattctctctggtgtcaatttgggtggactaatttagc 1279100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 7918495 - 7918450
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    |||||||| |||||| ||||||||||||||| ||||| ||||||||    
T  7918495 tcctcctcaaggtcttaggttcgattctctctggtgccaatttgag 7918450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 9842891 - 9842830
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    ||||||| |||| ||||| |||||||||||||||| ||||| | |||||||| || ||||||    
T  9842891 ttgggacttgggagtgtgctcctcctcgaggtctcgggttcaaatctctccgatgataattt 9842830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 18207257 - 18207302
Alignment:
Q  189 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 234  Q
    ||||||||||||||||||| ||||||||| |||||  |||||||||    
T  18207257 gaggtctcaggttcgattccctccggtgccaatttcggtgggctaa 18207302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 17675787 - 17675759
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctc 209  Q
    |||||||||||||||||||||||||||||    
T  17675787 tcctcctcgaggtctcaggttcgattctc 17675759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 31074276 - 31074324
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    ||||| |||||||| || ||||||||||||||||||| ||||| |||||    
T  31074276 gtgtgttcctcctcaagatctcaggttcgattctctctggtgccaattt 31074324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 11559 - 11621
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttg 224  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||| |||| |||||||    
T  11559 ttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgttaatttg 11621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 112320 - 112391
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||||||||| | ||||||| ||||||||||||||||||||| |||||  |||| ||||||||||    
T  112320 ctgggagtgtggtcctctttgaggtctgaggttcgattctctccggtgccaatttaggtggactaatttagc 112391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 14997 - 14932
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| |||||||||||||||||  || ||||||||||||||  ||||| ||||||||||||||||    
T  14997 gtgtgctcctcctcgaggtctcatatttgattctctccggtgacaatttaagtgggctaatttagc 14932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 20007 - 19943
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 226  Q
    |||| ||||||| || || |||||||| |||||||||||||||||||||| |||| |||||||||    
T  20007 ttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctggtgttaatttgag 19943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 157025 - 156956
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    ||||| ||||| ||||||||||||||  |||||||||| ||| |||||  ||||||||||||||||||||||    
T  157025 ctgggagtgtgctcctcctcgaggtc--aggttcgattttcttcggtgtcaatttgagtgggctaatttagc 156956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 2737 - 2678
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||| |||||||||||||||||||||| ||||| |||||||   ||||||||||||    
T  2737 tcctcctcaaggtctcaggttcgattctctctggtgccaatttgaagaggctaatttagc 2678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 13084 - 13021
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggct 232  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||| ||  |||||| |||||||    
T  13084 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctccgatgtcaatttgggtgggct 13021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 41659 - 41600
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||||||||||||||||| |||||||| | ||  |||||| |||||||||||||||    
T  41659 tcctcctcgaggtctcaggttcaattctctctgatgtcaatttgggtgggctaatttagc 41600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 49350 - 49413
Alignment:
Q  175 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||| ||||| ||||||| ||||||||||||||||||||||  ||||| |||||| |||||||    
T  49350 gtgtgctcctcttcgaggtatcaggttcgattctctccggtgtcaatttaagtgggttaattta 49413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 14987 - 14942
Alignment:
Q  192 gtctcaggttcgattctctccggtgctaatttgagtgggctaattt 237  Q
    ||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  14987 gtctcaggttcgattctctccggggctaatttgggtgggttaattt 14942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 24084 - 24160
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattta 238  Q
    ||||||| | || ||||| ||||| |||| || |||||||||||| |||| | ||| ||||||||||||||||||||    
T  24084 ttgggacttaggagtgtgctcctcttcgaagtgtcaggttcgattatctctgatgccaatttgagtgggctaattta 24160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 18344 - 18407
Alignment:
Q  176 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||| |||||||| |||| ||||||| ||||||||| ||||| ||||||||| ||||||||||||    
T  18344 tgtgctcctcctcaaggtttcaggtttgattctctctggtgccaatttgagt-ggctaatttagc 18407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 15803 - 15744
Alignment:
Q  181 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||| |||||||| ||| |||||||  |||||| |||||| |||||||||||||||    
T  15803 tcctcctcaaggtctcaagtttgattctccgcggtgccaatttgggtgggctaatttagc 15744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 45804 - 45750
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtg 216  Q
    ||||||||| || ||||| ||||||| ||||||||| ||||||||||||| ||||    
T  45804 ttgggacctaggagtgtgttcctccttgaggtctcatgttcgattctctctggtg 45750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 885 - 836
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 211  Q
    |||||| |||||  |||| |||||||||| ||||||||||||||||||||    
T  885 ttgggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctc 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 8679 - 8626
Alignment:
Q  170 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    |||| ||||||||||||| ||||||| |||||||||| ||| |||||| |||||    
T  8679 tgggagtgtggtcctccttgaggtctgaggttcgattatcttcggtgccaattt 8626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 95016 - 94955
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 223  Q
    |||| ||||||| ||||| |||||||| ||||||||||||| ||| |||| ||||| |||||    
T  95016 ttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatctctggtgccaattt 94955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 2508 - 2468
Alignment:
Q  169 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 209  Q
    ||||| ||||| |||||||| ||||||||||||||||||||    
T  2508 ctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 6964 - 6889
Alignment:
Q  162 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatttagc 240  Q
    |||||||  ||| ||||| |||||||| | ||||||||||||||   ||| ||||  ||||||||||||||||||||||    
T  6964 ttgggactggggagtgtgctcctcctcaaagtctcaggttcgat---ctctggtgtcaatttgagtgggctaatttagc 6889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University