View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1798_high_39 (Length: 248)
Name: NF1798_high_39
Description: NF1798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1798_high_39 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 15 - 229
Target Start/End: Complemental strand, 33196957 - 33196743
Alignment:
| Q |
15 |
catagggaagggaagcttgaagaatacaaaagaagagagatattgggagtgtatgtaataagagagattccggtttctatcatggctcagataaagaggt |
114 |
Q |
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| T |
33196957 |
catagggaagggaagcttgaagaatacaaaagaagagagatattgggagtgtatgtaataagagagattccggtttctatcatggctcagataaagaggt |
33196858 |
T |
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| Q |
115 |
ctccattcaccccactcctaaagaaaaagaaaaagtgtgtctaggaattgaaggatgtgatttttcatttgtgggaatattagtggaggatcttctatct |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33196857 |
ctccattcaccccactcctaaagaaaaagaaaaagtgtgtctaggaattgaaggatgtgatttttcatttgtgggaatattagtggaggatcttctatct |
33196758 |
T |
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| Q |
215 |
tctctatggtatagt |
229 |
Q |
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||||||||||||||| |
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| T |
33196757 |
tctctatggtatagt |
33196743 |
T |
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