View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1798_low_1 (Length: 1021)

Name: NF1798_low_1
Description: NF1798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1798_low_1
NF1798_low_1
[»] chr8 (56 HSPs)
chr8 (644-1015)||(28260027-28260399)
chr8 (16-305)||(28264038-28264327)
chr8 (396-648)||(28263694-28263948)
chr8 (17-272)||(28289410-28289665)
chr8 (16-266)||(28293892-28294142)
chr8 (16-266)||(28304094-28304344)
chr8 (16-231)||(28279544-28279759)
chr8 (680-932)||(28074555-28074806)
chr8 (662-944)||(29291794-29292076)
chr8 (662-866)||(6888080-6888281)
chr8 (662-943)||(12774654-12774935)
chr8 (681-942)||(5153800-5154062)
chr8 (677-943)||(35135231-35135499)
chr8 (662-854)||(14424712-14424904)
chr8 (680-840)||(30543802-30543962)
chr8 (665-864)||(30850989-30851188)
chr8 (662-943)||(27097611-27097893)
chr8 (662-814)||(10867011-10867163)
chr8 (680-844)||(11437460-11437625)
chr8 (700-864)||(16052166-16052331)
chr8 (664-864)||(28902114-28902314)
chr8 (674-864)||(16054329-16054519)
chr8 (666-864)||(28291990-28292187)
chr8 (739-864)||(13583409-13583534)
chr8 (717-795)||(31436557-31436635)
chr8 (700-864)||(24696642-24696807)
chr8 (662-837)||(32239310-32239486)
chr8 (735-797)||(12358697-12358759)
chr8 (740-797)||(12357574-12357631)
chr8 (662-864)||(12956512-12956706)
chr8 (718-861)||(28859131-28859275)
chr8 (438-505)||(2687692-2687759)
chr8 (665-933)||(13529926-13530194)
chr8 (665-933)||(13619465-13619733)
chr8 (445-502)||(24578852-24578909)
chr8 (662-864)||(22894421-22894622)
chr8 (438-503)||(14130115-14130180)
chr8 (438-505)||(16598198-16598266)
chr8 (717-796)||(26882486-26882566)
chr8 (707-778)||(31232124-31232193)
chr8 (438-505)||(16598116-16598183)
chr8 (438-481)||(24577624-24577667)
chr8 (438-505)||(24730982-24731049)
chr8 (438-481)||(30440687-30440730)
chr8 (669-759)||(5570136-5570226)
chr8 (662-742)||(14977118-14977199)
chr8 (442-503)||(20693753-20693814)
chr8 (438-475)||(26377981-26378018)
chr8 (438-498)||(30442477-30442537)
chr8 (438-505)||(2609567-2609634)
chr8 (959-1014)||(23876516-23876571)
chr8 (668-775)||(41505516-41505623)
chr8 (963-1004)||(22892738-22892779)
chr8 (662-751)||(28901343-28901432)
chr8 (735-811)||(29047261-29047338)
chr8 (963-1004)||(30850551-30850592)
[»] chr1 (49 HSPs)
chr1 (662-945)||(26102080-26102363)
chr1 (674-922)||(31313587-31313835)
chr1 (669-923)||(27461011-27461266)
chr1 (662-864)||(30675507-30675709)
chr1 (662-864)||(11769883-11770086)
chr1 (662-904)||(18795204-18795447)
chr1 (682-856)||(25727806-25727981)
chr1 (682-856)||(25736214-25736389)
chr1 (662-940)||(18391105-18391386)
chr1 (664-913)||(26854160-26854407)
chr1 (690-864)||(52271134-52271308)
chr1 (662-864)||(19257695-19257895)
chr1 (665-904)||(21548674-21548913)
chr1 (662-864)||(25126503-25126705)
chr1 (662-841)||(15298782-15298961)
chr1 (662-863)||(18300893-18301095)
chr1 (665-881)||(15416845-15417062)
chr1 (662-864)||(25494378-25494571)
chr1 (662-811)||(8247599-8247749)
chr1 (662-856)||(26657499-26657693)
chr1 (682-853)||(25730471-25730643)
chr1 (664-837)||(34381733-34381909)
chr1 (826-923)||(34935166-34935262)
chr1 (705-864)||(30781826-30781985)
chr1 (662-864)||(50047204-50047400)
chr1 (813-932)||(31319433-31319551)
chr1 (666-759)||(13807747-13807840)
chr1 (438-505)||(12944066-12944133)
chr1 (662-890)||(23223434-23223665)
chr1 (438-500)||(8967881-8967943)
chr1 (760-861)||(23519661-23519761)
chr1 (755-906)||(25373862-25374013)
chr1 (438-505)||(50713663-50713730)
chr1 (662-732)||(12810345-12810415)
chr1 (438-505)||(9030966-9031034)
chr1 (396-496)||(9195023-9195126)
chr1 (963-1015)||(21549225-21549277)
chr1 (438-505)||(8221438-8221505)
chr1 (402-505)||(10927105-10927209)
chr1 (662-743)||(19884195-19884276)
chr1 (963-1015)||(14744932-14744984)
chr1 (760-844)||(23521639-23521722)
chr1 (438-505)||(10925690-10925757)
chr1 (963-1014)||(50047663-50047714)
chr1 (396-481)||(50335772-50335858)
chr1 (435-500)||(8965852-8965917)
chr1 (963-1004)||(25778312-25778353)
chr1 (441-505)||(28660818-28660883)
chr1 (963-1004)||(34533206-34533247)
[»] chr4 (53 HSPs)
chr4 (717-945)||(31859708-31859937)
chr4 (662-881)||(46647219-46647437)
chr4 (662-842)||(9288233-9288413)
chr4 (669-856)||(15192233-15192420)
chr4 (676-921)||(26159793-26160036)
chr4 (707-844)||(29437539-29437676)
chr4 (662-943)||(21077256-21077537)
chr4 (666-861)||(19601825-19602020)
chr4 (665-880)||(10576479-10576694)
chr4 (674-888)||(21167764-21167979)
chr4 (705-864)||(34864185-34864342)
chr4 (704-864)||(17026586-17026746)
chr4 (666-847)||(18444277-18444458)
chr4 (662-865)||(25315120-25315323)
chr4 (665-904)||(13275591-13275833)
chr4 (717-939)||(33519108-33519331)
chr4 (662-833)||(23353646-23353815)
chr4 (740-856)||(13064527-13064643)
chr4 (665-923)||(17339644-17339902)
chr4 (708-865)||(5676268-5676426)
chr4 (669-933)||(16442078-16442343)
chr4 (438-505)||(13990749-13990816)
chr4 (677-804)||(20044216-20044343)
chr4 (662-856)||(27302801-27302994)
chr4 (745-916)||(32021900-32022069)
chr4 (396-505)||(7633985-7634097)
chr4 (784-865)||(7024107-7024188)
chr4 (662-810)||(9782926-9783075)
chr4 (712-864)||(17187248-17187398)
chr4 (823-904)||(22343803-22343884)
chr4 (742-864)||(12111217-12111337)
chr4 (662-772)||(22119669-22119779)
chr4 (676-779)||(10320193-10320297)
chr4 (735-786)||(12243694-12243745)
chr4 (439-505)||(18689593-18689659)
chr4 (662-732)||(24925828-24925898)
chr4 (760-854)||(47024665-47024758)
chr4 (767-864)||(5906652-5906749)
chr4 (739-780)||(13206649-13206690)
chr4 (438-499)||(13991457-13991518)
chr4 (794-923)||(22119776-22119904)
chr4 (438-502)||(10494853-10494917)
chr4 (963-1014)||(5676767-5676818)
chr4 (438-505)||(9260523-9260590)
chr4 (438-505)||(21433635-21433702)
chr4 (435-502)||(53477289-53477356)
chr4 (739-888)||(30624966-30625115)
chr4 (662-750)||(1676299-1676387)
chr4 (662-750)||(1682827-1682915)
chr4 (396-447)||(2880069-2880120)
chr4 (439-505)||(18657114-18657180)
chr4 (745-798)||(6817706-6817759)
chr4 (961-1014)||(10577032-10577085)
[»] chr2 (46 HSPs)
chr2 (662-943)||(24047405-24047686)
chr2 (662-891)||(17152176-17152406)
chr2 (662-923)||(21848905-21849164)
chr2 (662-923)||(18236133-18236394)
chr2 (664-841)||(19541062-19541239)
chr2 (674-942)||(39730482-39730751)
chr2 (712-864)||(27417152-27417305)
chr2 (665-864)||(18818723-18818927)
chr2 (662-889)||(30998794-30999021)
chr2 (662-866)||(21505026-21505231)
chr2 (739-842)||(17415075-17415177)
chr2 (662-796)||(34063798-34063937)
chr2 (665-923)||(18117009-18117266)
chr2 (678-850)||(15454443-15454606)
chr2 (676-866)||(31262036-31262224)
chr2 (747-891)||(17862518-17862662)
chr2 (674-864)||(24188001-24188194)
chr2 (666-811)||(27917925-27918071)
chr2 (744-844)||(1732656-1732756)
chr2 (748-844)||(14921948-14922044)
chr2 (660-781)||(28278395-28278517)
chr2 (682-864)||(1733143-1733316)
chr2 (402-505)||(5171657-5171763)
chr2 (402-505)||(33051529-33051635)
chr2 (438-505)||(23457596-23457663)
chr2 (438-505)||(28737787-28737854)
chr2 (662-864)||(35707826-35708028)
chr2 (668-811)||(19949496-19949640)
chr2 (718-861)||(25474116-25474259)
chr2 (664-779)||(35031727-35031843)
chr2 (663-750)||(21843006-21843093)
chr2 (662-764)||(32276503-32276605)
chr2 (708-864)||(16593640-16593796)
chr2 (590-646)||(19548183-19548239)
chr2 (680-798)||(17240812-17240928)
chr2 (680-816)||(22388695-22388827)
chr2 (739-798)||(28413918-28413977)
chr2 (441-505)||(32162041-32162106)
chr2 (438-505)||(4184878-4184946)
chr2 (435-502)||(19582057-19582124)
chr2 (963-1014)||(21504066-21504117)
chr2 (737-775)||(23255631-23255669)
chr2 (438-475)||(1218389-1218426)
chr2 (962-1015)||(15453989-15454042)
chr2 (963-1004)||(18235809-18235850)
chr2 (669-722)||(29647577-29647630)
[»] chr5 (43 HSPs)
chr5 (669-923)||(26070504-26070758)
chr5 (662-864)||(7742759-7742961)
chr5 (660-923)||(19763716-19763984)
chr5 (662-888)||(16634069-16634296)
chr5 (662-862)||(20694663-20694863)
chr5 (662-841)||(24410842-24411021)
chr5 (662-856)||(24841776-24841970)
chr5 (676-865)||(11274218-11274408)
chr5 (745-923)||(17695293-17695464)
chr5 (701-923)||(18178162-18178385)
chr5 (682-862)||(22229847-22230027)
chr5 (660-860)||(25594585-25594786)
chr5 (662-864)||(17027550-17027752)
chr5 (662-863)||(20083488-20083691)
chr5 (662-890)||(24517377-24517597)
chr5 (717-889)||(11997757-11997931)
chr5 (665-797)||(15697293-15697425)
chr5 (700-780)||(25367655-25367735)
chr5 (749-922)||(25943702-25943875)
chr5 (704-864)||(26329959-26330117)
chr5 (662-844)||(19331534-19331715)
chr5 (662-816)||(18222516-18222671)
chr5 (662-889)||(16622541-16622759)
chr5 (690-807)||(30790827-30790944)
chr5 (662-843)||(17381954-17382127)
chr5 (662-750)||(23157792-23157880)
chr5 (662-864)||(12339904-12340106)
chr5 (828-942)||(24130817-24130932)
chr5 (662-751)||(25680619-25680708)
chr5 (673-778)||(29150882-29150986)
chr5 (666-781)||(15205670-15205786)
chr5 (438-502)||(18252366-18252430)
chr5 (737-811)||(25075254-25075329)
chr5 (737-811)||(25133223-25133298)
chr5 (742-864)||(30072218-30072341)
chr5 (738-864)||(22643794-22643920)
chr5 (443-505)||(26140298-26140360)
chr5 (708-856)||(22754963-22755112)
chr5 (741-798)||(24279581-24279638)
chr5 (741-798)||(24382576-24382633)
chr5 (700-776)||(16603590-16603667)
chr5 (664-751)||(22967845-22967932)
chr5 (963-1014)||(25594141-25594192)
[»] chr6 (32 HSPs)
chr6 (662-923)||(16439482-16439742)
chr6 (690-942)||(26499658-26499910)
chr6 (704-904)||(9942999-9943199)
chr6 (662-864)||(17860338-17860540)
chr6 (662-923)||(26512609-26512869)
chr6 (662-923)||(26517725-26517985)
chr6 (674-840)||(12972298-12972464)
chr6 (707-864)||(9396496-9396652)
chr6 (662-811)||(32930415-32930564)
chr6 (700-816)||(24617572-24617688)
chr6 (662-865)||(14924306-14924509)
chr6 (757-864)||(33638394-33638501)
chr6 (735-798)||(15178102-15178165)
chr6 (723-864)||(24507332-24507473)
chr6 (668-864)||(15574953-15575149)
chr6 (665-760)||(1755555-1755650)
chr6 (666-798)||(14768224-14768356)
chr6 (662-758)||(20495790-20495885)
chr6 (735-798)||(15165788-15165851)
chr6 (963-1010)||(30235860-30235907)
chr6 (404-498)||(34373865-34373962)
chr6 (438-505)||(12882072-12882140)
chr6 (964-1014)||(16174840-16174890)
chr6 (725-851)||(22559116-22559241)
chr6 (662-861)||(30355349-30355539)
chr6 (963-1015)||(16528227-16528279)
chr6 (665-811)||(15998537-15998684)
chr6 (664-779)||(17198737-17198845)
chr6 (821-864)||(33638268-33638311)
chr6 (584-642)||(15092102-15092160)
chr6 (678-779)||(26518507-26518608)
chr6 (823-904)||(32930295-32930375)
[»] chr3 (47 HSPs)
chr3 (674-933)||(23908091-23908350)
chr3 (662-840)||(26387758-26387936)
chr3 (662-866)||(21829020-21829224)
chr3 (662-864)||(11474869-11475072)
chr3 (662-864)||(19219100-19219303)
chr3 (662-846)||(8402459-8402642)
chr3 (705-904)||(18474236-18474435)
chr3 (748-913)||(26418829-26418994)
chr3 (679-863)||(19285139-19285322)
chr3 (664-826)||(26297774-26297934)
chr3 (682-890)||(10341838-10342038)
chr3 (669-864)||(21017907-21018102)
chr3 (662-915)||(33577757-33578004)
chr3 (688-811)||(26797191-26797313)
chr3 (680-789)||(30493228-30493338)
chr3 (662-810)||(11521163-11521311)
chr3 (662-781)||(13911288-13911408)
chr3 (662-864)||(1475169-1475372)
chr3 (680-891)||(5632405-5632607)
chr3 (739-926)||(21813586-21813775)
chr3 (669-864)||(25883133-25883328)
chr3 (707-860)||(25919365-25919509)
chr3 (705-866)||(25188823-25188985)
chr3 (662-816)||(33914504-33914654)
chr3 (691-760)||(16970291-16970360)
chr3 (768-865)||(16970591-16970688)
chr3 (680-864)||(28422494-28422677)
chr3 (438-502)||(1320124-1320188)
chr3 (662-851)||(19263809-19263990)
chr3 (707-779)||(27415236-27415309)
chr3 (662-809)||(12573313-12573461)
chr3 (662-809)||(13549777-13549925)
chr3 (662-770)||(19545967-19546075)
chr3 (963-1014)||(10342332-10342383)
chr3 (438-505)||(2472760-2472828)
chr3 (662-714)||(12409481-12409533)
chr3 (963-999)||(14280792-14280828)
chr3 (586-642)||(37626644-37626700)
chr3 (674-780)||(2729591-2729698)
chr3 (963-1014)||(19542579-19542630)
chr3 (765-864)||(19543013-19543112)
chr3 (825-942)||(21653531-21653650)
chr3 (737-804)||(26484767-26484834)
chr3 (666-732)||(4775729-4775795)
chr3 (662-808)||(27374398-27374543)
chr3 (586-656)||(43481617-43481687)
chr3 (435-476)||(52708801-52708842)
[»] chr7 (61 HSPs)
chr7 (681-865)||(5312674-5312858)
chr7 (662-933)||(18496588-18496859)
chr7 (664-864)||(30405621-30405819)
chr7 (666-841)||(3268878-3269053)
chr7 (700-844)||(24596913-24597057)
chr7 (679-861)||(12358655-12358836)
chr7 (662-864)||(29544542-29544745)
chr7 (662-828)||(20461573-20461739)
chr7 (682-811)||(8308974-8309103)
chr7 (676-856)||(9761313-9761493)
chr7 (662-865)||(1074475-1074679)
chr7 (662-864)||(20470699-20470902)
chr7 (665-891)||(22532507-22532732)
chr7 (676-864)||(9801764-9801952)
chr7 (674-841)||(23124935-23125103)
chr7 (662-864)||(7142121-7142323)
chr7 (669-932)||(2353062-2353326)
chr7 (674-792)||(17881460-17881578)
chr7 (745-875)||(14649609-14649732)
chr7 (717-864)||(21471874-21472021)
chr7 (666-866)||(7372455-7372654)
chr7 (662-864)||(22067692-22067898)
chr7 (735-933)||(25706250-25706448)
chr7 (396-505)||(8916449-8916561)
chr7 (791-861)||(21545719-21545789)
chr7 (662-776)||(4828814-4828926)
chr7 (662-816)||(7815346-7815501)
chr7 (438-501)||(11000902-11000965)
chr7 (435-502)||(18790247-18790314)
chr7 (662-811)||(1255155-1255305)
chr7 (402-499)||(1786594-1786694)
chr7 (740-797)||(7326827-7326884)
chr7 (662-750)||(21545803-21545891)
chr7 (445-505)||(24840100-24840160)
chr7 (743-810)||(3487309-3487376)
chr7 (682-807)||(10292797-10292923)
chr7 (438-503)||(1690205-1690270)
chr7 (966-1015)||(9552725-9552774)
chr7 (402-502)||(11228892-11228995)
chr7 (438-505)||(1365621-1365689)
chr7 (441-505)||(1369758-1369822)
chr7 (963-1015)||(9760676-9760728)
chr7 (665-943)||(2351023-2351301)
chr7 (438-505)||(5934554-5934621)
chr7 (447-505)||(11228679-11228738)
chr7 (438-505)||(35814821-35814888)
chr7 (680-751)||(37144961-37145032)
chr7 (968-1014)||(7777580-7777626)
chr7 (963-1016)||(9801118-9801171)
chr7 (674-754)||(2632436-2632516)
chr7 (963-1015)||(5312265-5312317)
chr7 (674-714)||(19140020-19140060)
chr7 (674-714)||(20739419-20739459)
chr7 (445-505)||(27142623-27142683)
chr7 (669-864)||(46054728-46054920)
chr7 (438-497)||(4955944-4956003)
chr7 (681-744)||(7956223-7956286)
chr7 (963-1014)||(17880430-17880481)
chr7 (402-502)||(6451825-6451928)
chr7 (966-1015)||(24596482-24596531)
chr7 (587-648)||(31412559-31412620)
[»] scaffold0188 (1 HSPs)
scaffold0188 (700-864)||(26844-27009)
[»] scaffold0171 (2 HSPs)
scaffold0171 (658-864)||(21416-21623)
scaffold0171 (767-864)||(6324-6420)
[»] scaffold0011 (1 HSPs)
scaffold0011 (669-864)||(228076-228269)
[»] scaffold0190 (1 HSPs)
scaffold0190 (662-864)||(11587-11789)
[»] scaffold0043 (1 HSPs)
scaffold0043 (662-827)||(58768-58934)
[»] scaffold0386 (3 HSPs)
scaffold0386 (662-812)||(13012-13163)
scaffold0386 (963-1004)||(8228-8269)
scaffold0386 (963-1004)||(11258-11299)
[»] scaffold0337 (1 HSPs)
scaffold0337 (723-864)||(1892-2033)
[»] scaffold0065 (1 HSPs)
scaffold0065 (723-864)||(12328-12469)
[»] scaffold0090 (1 HSPs)
scaffold0090 (402-505)||(15136-15241)
[»] scaffold0251 (1 HSPs)
scaffold0251 (438-508)||(9652-9722)
[»] scaffold0002 (1 HSPs)
scaffold0002 (735-811)||(447072-447149)
[»] scaffold1026 (1 HSPs)
scaffold1026 (680-807)||(1780-1907)
[»] scaffold0185 (1 HSPs)
scaffold0185 (669-798)||(1473-1602)
[»] scaffold0282 (1 HSPs)
scaffold0282 (782-890)||(22477-22584)
[»] scaffold0024 (1 HSPs)
scaffold0024 (438-504)||(145683-145750)
[»] scaffold0240 (1 HSPs)
scaffold0240 (438-500)||(15997-16059)


Alignment Details
Target: chr8 (Bit Score: 329; Significance: 0; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 644 - 1015
Target Start/End: Complemental strand, 28260399 - 28260027
Alignment:
Q  644 ctccaatcctagttgatctcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccatag 743  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  28260399 ctccaatcctagttgatctcaatggttggtggaacattttgtattattttcattttagtcgttgtaatttaggtttatcctaaatcatgagactccatag 28260300  T
Q  744 gtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaa-tattgaagatcaatggttcttag 842  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||     
T  28260299 gtgttttgagtctttttagtgagaaatcatgtaaatcagcaaaacaagacatcacgtggaggatcaagtatatcaaatattgaagatcaatagttcttat 28260200  T
Q  843 aaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaatgcaaaatt 942  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28260199 aaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggaagaacgctcgaaaaaagacgaaaaatgcaaaatt 28260100  T
Q  943 cacccagggtatgtttctcctcctcctcttgttctctctatggtatgtttttctattattttatgatgatgtc 1015  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28260099 cacgcagggtatgtttgtcctcctcctcttgttctctctatggtatgtttttctattattttatgatgatgtc 28260027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 16 - 305
Target Start/End: Complemental strand, 28264327 - 28264038
Alignment:
Q  16 tatggaagaggagaactacttgtgactatggatgagaatttgcaaaaggattttgatgagaaacaagtagagtttttgttgattgttggattatggtgtg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28264327 tatggaagaggagaactacttgtgactatggatgagaatttgcaaaaggattttgatgagaaacaagtagagtttttgttgattgttggattatggtgtg 28264228  T
Q  116 ctcatcctgatgtaagtttaagaccatcaattgtgcaagcaattcaagtgcttaattttgaggttgccttgccaaatcttccaccaaagaagcctgttgc 215  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28264227 ctcatccggatgtaagtttaagaccatcaattgtgcaagcaattcaagtgcttaattttgaggttgcattgccaaatcttccaccaaagaagcctgttgc 28264128  T
Q  216 aacttatcttgctcctgcaacgcctataagctcagaagaagcttccataacaacaagcctagagaatggtcgttaatttcgatgcagggg 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28264127 aacttatcttgctcctgcaacgcctataagctcagaagaagcttccataaccacaagcctagagaatggtcgttaatttcgatgcagggg 28264038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 396 - 648
Target Start/End: Complemental strand, 28263948 - 28263694
Alignment:
Q  396 cctagcatttaagcttaacatttgtaacctaacagacagttttt-cattcaataatattttagagagttttcacaatttctgctggactctagaacccta 494  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28263948 cctagtatttaagcttaacagttgtaacctaacagacagttttttcattcaataatattttagagagttttcataatttctgctggactctagaacccta 28263849  T
Q  495 ttttcacaagtgtttt-gctattaataccatagttttatagttgttccctcgttccttccattgaagtcatgtttcacaacaacacatatttacctaaaa 593  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||    
T  28263848 ttttcacaagtttttttgctattaatatcatagttttatagttgttccctcattccttccattgatgtcatgtttcacaacaacacatatttacctgaaa 28263749  T
Q  594 ccttaaaacattagatatatgaatcacctctattatatatccaacatttcctcca 648  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28263748 ccttaaaacattagatatatgaatcacctcttttatatatccaacatttcctcca 28263694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 17 - 272
Target Start/End: Original strand, 28289410 - 28289665
Alignment:
Q  17 atggaagaggagaactacttgtgactatggatgagaatttgcaaaaggattttgatgagaaacaagtagagtttttgttgattgttggattatggtgtgc 116  Q
    ||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  28289410 atggaagaggagagctacttgtgaccatggatgagaatttgcgaaaggatttcgatgagaaacaagtagagtgtttgttgattgttggattatggtgtgc 28289509  T
Q  117 tcatcctgatgtaagtttaagaccatcaattgtgcaagcaattcaagtgcttaattttgaggttgccttgccaaatcttccaccaaagaagcctgttgca 216  Q
    |||||||||||||||| |||||||||| |||   ||||||||||||||||| ||||||||| |||| |||||||||||||| |  || | |||| |||||    
T  28289510 tcatcctgatgtaagtctaagaccatccattagacaagcaattcaagtgctaaattttgagattgctttgccaaatcttcccctgaataggcctattgca 28289609  T
Q  217 acttatcttgctcctgcaacgcctataagctcagaagaagcttccataacaacaag 272  Q
    || |||| ||||||| || || || ||||||| | ||||||||||||||| |||||    
T  28289610 acctatcatgctcctacaccgactctaagctcggtagaagcttccataaccacaag 28289665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 16 - 266
Target Start/End: Complemental strand, 28294142 - 28293892
Alignment:
Q  16 tatggaagaggagaactacttgtgactatggatgagaatttgcaaaaggattttgatgagaaacaagtagagtttttgttgattgttggattatggtgtg 115  Q
    |||||||| ||||| ||||||||  | |||||||| ||||||||||| ||||||||||||||| |||||||||  ||| ||||||||||||| |||||||    
T  28294142 tatggaagtggagagctacttgtcgccatggatgaaaatttgcaaaatgattttgatgagaaagaagtagagtgcttgatgattgttggattgtggtgtg 28294043  T
Q  116 ctcatcctgatgtaagtttaagaccatcaattgtgcaagcaattcaagtgcttaattttgaggttgccttgccaaatcttccaccaaagaagcctgttgc 215  Q
    ||||||||||||| ||| | |||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  28294042 ctcatcctgatgttagtcttagaccatcgattagacaagcaattcaagtgcttaattttgaggttgccttgccaaatcttccaccaaagaggccagttgc 28293943  T
Q  216 aacttatcttgctcctgcaacgcctataagctcagaagaagcttccataac 266  Q
    ||| |||| || |||| || |  |  ||||||| | |||||||||||||||    
T  28293942 aacctatcatgttccttcatcatcggtaagctctgtagaagcttccataac 28293892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 16 - 266
Target Start/End: Complemental strand, 28304344 - 28304094
Alignment:
Q  16 tatggaagaggagaactacttgtgactatggatgagaatttgcaaaaggattttgatgagaaacaagtagagtttttgttgattgttggattatggtgtg 115  Q
    ||||||| |||||| ||||||||| | |||||||||||||||   || |||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  28304344 tatggaaaaggagagctacttgtggcaatggatgagaatttgaggaaagattttgatgagaaacaagtagagtgcttgatgattgttggattatggtgtg 28304245  T
Q  116 ctcatcctgatgtaagtttaagaccatcaattgtgcaagcaattcaagtgcttaattttgaggttgccttgccaaatcttccaccaaagaagcctgttgc 215  Q
    ||||||||||||| ||| ||||||||||||||   ||||| |||||||||||||||||||||||| || ||||||||||||| ||||||| ||| |||||    
T  28304244 ctcatcctgatgttagtctaagaccatcaattagacaagccattcaagtgcttaattttgaggtttccatgccaaatcttccgccaaagaggccagttgc 28304145  T
Q  216 aacttatcttgctcctgcaacgcctataagctcagaagaagcttccataac 266  Q
    ||| |||| ||||||  || |  || ||||||| | |||||||||||||||    
T  28304144 aacctatcatgctcccacaccatctgtaagctccgtagaagcttccataac 28304094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 16 - 231
Target Start/End: Original strand, 28279544 - 28279759
Alignment:
Q  16 tatggaagaggagaactacttgtgactatggatgagaatttgcaaaaggattttgatgagaaacaagtagagtttttgttgattgttggattatggtgtg 115  Q
    |||||||||| |||| |||| ||||| |||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  28279544 tatggaagagaagaaatactcgtgaccatggatgagaatttgcgaaaggatttcgatgagaaacaagtagagtgtttgttgattgttggattatggtgtg 28279643  T
Q  116 ctcatcctgatgtaagtttaagaccatcaattgtgcaagcaattcaagtgcttaattttgaggttgccttgccaaatcttccaccaaagaagcctgttgc 215  Q
     |||||||||||| ||| |||||||||| |||   |||||||| |||||||||||||||||||||| | |||||||| | ||||||||||  || |||||    
T  28279644 ttcatcctgatgttagtctaagaccatcgattagacaagcaatccaagtgcttaattttgaggttgacatgccaaatttgccaccaaagagaccagttgc 28279743  T
Q  216 aacttatcttgctcct 231  Q
    ||| |||| |||||||    
T  28279744 aacctatcatgctcct 28279759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 680 - 932
Target Start/End: Original strand, 28074555 - 28074806
Alignment:
Q  680 ttttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaat 779  Q
    ||||||||| ||||||||  |||||||| ||||||| ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  28074555 ttttgtattgttttcattg-agtcgttgcaattcacttttatcctaaatcatgcaactccataggtgtttcgagtctttttagtgagaaatcatgtaaat 28074653  T
Q  780 cagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattca 879  Q
      | ||||||||||||||  || ||||||||| |||| || | ||||||||| |||| ||||  | |||||  |||||||||||||| ||| ||||||||    
T  28074654 atgcaaaacaagacatcaaatgaaggatcaaggatatgaagaatgaagatcagtggtccttacgaggttttgaaagataatacaagttggggaaaattca 28074753  T
Q  880 tctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaa 932  Q
    ||||| |||| |  ||||||||||| | | ||||  |||||||| ||||||||    
T  28074754 tctcatgttctaaggcatttcaagaagaaagaactttcgaaaaaggacgaaaa 28074806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 662 - 944
Target Start/End: Original strand, 29291794 - 29292076
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||  |||| |||| ||||||||| |||||||||||| ||  ||||||||||||||||  |||  ||| || |||||||||||||||    
T  29291794 tcaatggtttgaggaattttttatatt-ttttcatttgagtcgttgtaatgcagttttatcctaaatcatgcaactttataagtattttgagtcttttta 29291892  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    || |||||||||||||||| | ||||||||| |||||||| || ||| || |||| ||||||||||||||||||||||||||| || |||||||| || |    
T  29291893 gtaagaaatcatgtaaatcggcaaaacaagatatcacgtgaagaatcgaggatatgaatattgaagatcaatggttcttagaaggtctttgaagacaaca 29291992  T
Q  862 caagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa-agacgaaaaatgcaaaattca 944  Q
     ||   |  |||||||||| |||| ||||| | |||| ||||| ||| |||||| |||||||  |||||||| || ||||||||    
T  29291993 gaaagtgaaaaaaattcatttcaaattccaattcattgcaagacggaagaacgcacgaaaaagggacgaaaattgtaaaattca 29292076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 662 - 866
Target Start/End: Complemental strand, 6888281 - 6888080
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||| | | ||||||||||||| ||||||||| |||| ||||||||||  | ||||||||||||||  ||||||  ||||||||||||| |||||    
T  6888281 tcaatggttagagaaacattttgtatt-ttttcatttgagtcattgtaattcagttctatcctaaatcatgcaactcca--ggtgttttgagtcatttta 6888185  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    ||||||||||||||||||||  |||||||  ||||||||| || ||| || |||| || ||||||||||||||||||||| || || |||||||| ||||    
T  6888184 gtgagaaatcatgtaaatcaacaaaacaaaccatcacgtgcagtatcgaggatatgaagattgaagatcaatggttcttaaaatgtctttgaagacaata 6888085  T
Q  862 caagt 866  Q
    |||||    
T  6888084 caagt 6888080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 662 - 943
Target Start/End: Complemental strand, 12774935 - 12774654
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagt-cttttt 760  Q
    |||||||||||  | ||||||| ||||||||| |||| |||| |||||||| |  ||||||||||||||||  |  ||||||||||||| ||| ||||||    
T  12774935 tcaatggtttgacgtacattttatattatttttatttgagtcattgtaatttagttttatcctaaatcatgcaataccataggtgtttttagtacttttt 12774836  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtata-tcaatattgaagatcaatggttcttagaaagtttttgaagataa 859  Q
    ||| |||||| ||||||||| | |||||||| ||||||||||| ||||||  ||| |||| |||||||||||||||| |||| ||  | |||||||| ||    
T  12774835 agtaagaaataatgtaaatcggaaaaacaagtcatcacgtggaagatcaaagataatcaagattgaagatcaatggt-cttaaaa--tatttgaagacaa 12774739  T
Q  860 tacaagtc-gggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaatgcaaaattc 943  Q
    || ||||  |||||||||||||||||| || ||  ||||||||||| ||| ||||||| |||||  |||||||| ||||||||||    
T  12774738 tagaagtttgggaaaaattcatctcaaatttcaaggcatttcaagacggaagaacgcttgaaaagcgacgaaaagtgcaaaattc 12774654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 681 - 942
Target Start/End: Original strand, 5153800 - 5154062
Alignment:
Q  681 tttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatc 780  Q
    |||||||||||||||||  |||| ||||||||||  |||||| ||||||||   |||| |||||||||||||||||||||||| |||||||||||||||     
T  5153800 tttgtattattttcattcgagtcattgtaattcagttttatcttaaatcattcaactcgataggtgttttgagtctttttagtaagaaatcatgtaaata 5153899  T
Q  781 agtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcat 880  Q
     | |||||||||||| | ||| |||||| || |||| || |||||||||||||| || || ||| ||||||||||| |||| ||   |   |||||||||    
T  5153900 ggcaaaacaagacataaagtgaaggatcgaggatatgaagattgaagatcaatgattattggaaggtttttgaagacaatataacatgaataaaattcat 5153999  T
Q  881 ctcaagttccattgcatttcaagatggatgaacgctcgaaaaa-agacgaaaaatgcaaaatt 942  Q
     ||||||||||   |||| ||||| ||| ||| ||||||||||  |||||||| |||||||||    
T  5154000 ttcaagttccaagacattgcaagacggaagaatgctcgaaaaagggacgaaaactgcaaaatt 5154062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 677 - 943
Target Start/End: Complemental strand, 35135499 - 35135231
Alignment:
Q  677 acattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagt--gagaaatcatg 774  Q
    |||||||||||| |||| | |  |||| ||||||||||  ||||||||||||||||  |||||| | |||||||||||||||||  |  ||||||||| |    
T  35135499 acattttgtattgtttttactcgagtcattgtaattcatttttatcctaaatcatgcaactccacatgtgttttgagtctttttttttggagaaatcagg 35135400  T
Q  775 taaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaa 874  Q
    ||||||   ||||||||||||||||||||||||  ||  |||  | | |||| |||||||||| |||| | ||||||||||| | |||||||  ||||||    
T  35135399 taaatcgacaaaacaagacatcacgtggaggattgagggtatggagaatgaaaatcaatggttattaggaggtttttgaagacagtacaagttaggaaaa 35135300  T
Q  875 attcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaatgcaaaattc 943  Q
     ||||||  ||||||||  ||||||||||||||| ||||||| |||||| || ||||| ||||||||||    
T  35135299 tttcatcctaagttccaaggcatttcaagatggaagaacgcttgaaaaaggatgaaaagtgcaaaattc 35135231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 662 - 854
Target Start/End: Complemental strand, 14424904 - 14424712
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||| |||| |||  ||||||||  |||||||||||||||  ||||||||||||||||  ||||||||||||||||  || ||||||    
T  14424904 tcaatggtttgaggaactttttatatggttttcattcgagtcgttgtaattcagttttatcctaaatcatgcaactccataggtgttttaggttttttta 14424805  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaa 854  Q
    ||||||||||||||||||| | ||||||||||| || | | |||||  |  |||  || |||||||||||||||||||||||| |||||||||    
T  14424804 gtgagaaatcatgtaaatcggcaaaacaagacaacaagggaaggatatatgataagaagattgaagatcaatggttcttagaaggtttttgaa 14424712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 680 - 840
Target Start/End: Original strand, 30543802 - 30543962
Alignment:
Q  680 ttttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaat 779  Q
    ||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||  | |  ||||||||||||||||||||| ||||||||||||||||||    
T  30543802 ttttgtattgttttcatttgagttgttgtaattcacttttatcctaaatcatgcaattatataggtgttttgagtctttttggtgagaaatcatgtaaat 30543901  T
Q  780 cagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttctt 840  Q
    | ||||||||||| ||||| || |||||  || |||| || ||||||| ||||||||||||    
T  30543902 cggtaaaacaagatatcacatgaaggattgaggatatgaagattgaagttcaatggttctt 30543962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 665 - 864
Target Start/End: Complemental strand, 30851188 - 30850989
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtg 764  Q
    |||||||| ||||  |||| |||||||||||||  | |||||||||||||  ||||||||||||||||  |||| ||||||||||||  ||| | |||||    
T  30851188 atggtttgaggaagtttttatattattttcattcgaatcgttgtaattcagatttatcctaaatcatgcaactcaataggtgttttggatctatctagtg 30851089  T
Q  765 agaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||||||| |||||||||  ||| |||||||||  ||| ||||||||| |||| || |||||||||||| ||||||||||| || |||||| |||||||||    
T  30851088 agaaatcgtgtaaatcatcaaagcaagacatctagtgaaggatcaaggatatgaagattgaagatcaacggttcttagaatgtctttgaatataatacaa 30850989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 662 - 943
Target Start/End: Complemental strand, 27097893 - 27097611
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtc--tttt 759  Q
    ||||||||||| ||||||| ||| ||| ||||||||| |||||||||||||||  |||||| |||||||||  ||| |||||||||||  ||||  ||||    
T  27097893 tcaatggtttgaggaacatgttgcattgttttcatttgagtcgttgtaattcagttttatcataaatcatgcaacttcataggtgtttaaagtctttttt 27097794  T
Q  760 tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataa 859  Q
    ||||||||||||||||||||| | ||||||||||||||||||  ||||  |  |||| || |||||  || ||| |||||||||| || |||||||| ||    
T  27097793 tagtgagaaatcatgtaaatcggcaaaacaagacatcacgtgatggattgatcatatgaagattga--atgaatagttcttagaaggtctttgaagacaa 27097696  T
Q  860 tacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa-agacgaaaaatgcaaaattc 943  Q
    ||||||| |   ||||||||  ||||||||||  ||||| ||||| ||| |||| ||| ||||| ||| |||||  |||||||||    
T  27097695 tacaagttgaagaaaattcaattcaagttccaaggcattgcaagacggaagaacactcaaaaaagagatgaaaaccgcaaaattc 27097611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 662 - 814
Target Start/End: Original strand, 10867011 - 10867163
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| |||| |||||||||| ||||||||| |||||||||||||||  ||||||  ||||||||  |||||| ||||| ||||| ||||||||    
T  10867011 tcaatggtttgaggaatattttgtattgttttcatttgagtcgttgtaattcagttttatctcaaatcatgcaactccaaaggtgctttgaatcttttta 10867110  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtat 814  Q
    |||||||||||||||| || | ||||||||| | |||||| |||||| |||||    
T  10867111 gtgagaaatcatgtaagtcggcaaaacaagataccacgtgaaggatcgagtat 10867163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 680 - 844
Target Start/End: Original strand, 11437460 - 11437625
Alignment:
Q  680 ttttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaat 779  Q
    |||||| || ||||||||  ||||||| |||||||  || ||| ||  |||||  |||||||| || |||||||||||||||||||||||||||||||||    
T  11437460 ttttgtgttgttttcattcgagtcgttataattcagtttcatcataggtcatgcaactccatatgtattttgagtctttttagtgagaaatcatgtaaat 11437559  T
Q  780 cagtaaaacaagacatcacgtg-gaggatcaagtatatcaatattgaagatcaatggttcttagaa 844  Q
    | | |||||||||||||| |||  ||||||||| |||| || ||||||| ||||||||||||||||    
T  11437560 cggcaaaacaagacatcaagtgaaaggatcaaggatatgaaaattgaagttcaatggttcttagaa 11437625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 700 - 864
Target Start/End: Complemental strand, 16052331 - 16052166
Alignment:
Q  700 agtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcac 798  Q
    ||||||| |||||||| |||| | |||||||||  |||| ||||||||||||||| |||| |||||||||||||| |||||||  ||| |||||||||||    
T  16052331 agtcgttataattcacatttaccttaaatcatgcaactcaataggtgttttgagtgttttgtagtgagaaatcatctaaatcaacaaatcaagacatcac 16052232  T
Q  799 gtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
     || ||||| ||| |||| || ||| |||| ||||| ||||||||| ||||||||||| |||||||    
T  16052231 atgaaggataaaggatatgaagattaaagaccaatgattcttagaaggtttttgaagacaatacaa 16052166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 664 - 864
Target Start/End: Original strand, 28902114 - 28902314
Alignment:
Q  664 aatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttt-ttag 762  Q
    ||||||||| | ||||| ||||||| ||||||||  |||||||||||||||| ||||||||| | || |  | |||||| ||||||| ||| |||  |||    
T  28902114 aatggtttgagaaacatattgtattgttttcattcgagtcgttgtaattcacttttatcctataccacgcaaatccataagtgtttttagtgtttagtag 28902213  T
Q  763 tgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatac 862  Q
    |||||||||||||||||||  ||| | |||||||||||| ||||||||  |||| || ||| |||| ||||||||||||||| ||| ||||||| |||||    
T  28902214 tgagaaatcatgtaaatcaacaaatcgagacatcacgtgaaggatcaatgatattaa-attaaagaccaatggttcttagaaggttattgaagacaatac 28902312  T
Q  863 aa 864  Q
    ||    
T  28902313 aa 28902314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 674 - 864
Target Start/End: Original strand, 16054329 - 16054519
Alignment:
Q  674 ggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatca 772  Q
    ||||||||||||||| |||||| |  ||| |||||||||||  ||||||||| ||||| | ||||||||| |||||||| | |||| ||||||| |||||    
T  16054329 ggaacattttgtattgttttcactcgagttgttgtaattcatttttatcctagatcataaaactccatagatgttttgattgttttgtagtgaggaatca 16054428  T
Q  773 tgtaaatcagtaaaacaagacatcacgtggaggatcaa-gtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||||||||| |||  |||||||||| ||| |||||||| ||  || |  |||||||||||| ||||||||||| ||| ||||||| |||||||    
T  16054429 tgtaaatcattaattcaagacatcatgtgaaggatcaaggttgatga--attgaagatcaagggttcttagaaggttgttgaagaaaatacaa 16054519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 666 - 864
Target Start/End: Complemental strand, 28292187 - 28291990
Alignment:
Q  666 tggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtga 765  Q
    ||||||| |||||||||| | || ||||||||| ||| ||| |||||||  |||||||||| | |||  ||| || | |||||||| || ||||||||||    
T  28292187 tggtttgaggaacattttatgttcttttcatttgagttgttataattcagttttatcctaatttatgcaacttcacaagtgttttgtgtttttttagtga 28292088  T
Q  766 gaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||| |||||||||||   |||| |||||||||| || |||||  || |||| || ||||||||| |||||||||||||| || |||||||| |||||||    
T  28292087 gaa-tcatgtaaatcgccaaaataagacatcacatgaaggattgaggatatgaagattgaagattaatggttcttagaaggtctttgaagacaatacaa 28291990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 739 - 864
Target Start/End: Complemental strand, 13583534 - 13583409
Alignment:
Q  739 cataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttc 838  Q
    ||||| || |||||||||||||||||||||||||||||||||   |||||||||||||| ||| |||||| || |||| |  ||||||| ||||||||||    
T  13583534 catagttggtttgagtctttttagtgagaaatcatgtaaatcgacaaaacaagacatcaagtgaaggatcgaggatatgatgattgaagttcaatggttc 13583435  T
Q  839 ttagaaagtttttgaagataatacaa 864  Q
    ||||||  | |||||||| |||||||    
T  13583434 ttagaagatatttgaagacaatacaa 13583409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 717 - 795
Target Start/End: Original strand, 31436557 - 31436635
Alignment:
Q  717 tttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacat 795  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  31436557 tttatcctaaatcatgcaactacataggtgttttgaatctttttagtgagaaatcatgtaaatcaacaaaacaagacat 31436635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 700 - 864
Target Start/End: Original strand, 24696642 - 24696807
Alignment:
Q  700 agtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcac 798  Q
    ||||||||||||| || | |||||||||||||   | | || ||||||||| ||| |||| |||| |||||||||||||||||  ||| |||||||||||    
T  24696642 agtcgttgtaatttacttctatcctaaatcatacaatttcacaggtgtttttagtgttttatagtaagaaatcatgtaaatcaacaaatcaagacatcac 24696741  T
Q  799 gtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
     |  ||||||||| |||| || |||||||| || | |||||||||| ||||||||||| |||||||    
T  24696742 ataaaggatcaaggatatgaagattgaagaccacttgttcttagaaggtttttgaagaaaatacaa 24696807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 662 - 837
Target Start/End: Original strand, 32239310 - 32239486
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| | ||||| ||||||| |||| | || |||||||| ||||||| |||||| |||||||||  ||||||||  |||||||||| |||| |    
T  32239310 tcaatggtttgagtaacatattgtattgtttttacttgagtcgttgcaattcacttttatcttaaatcatgcaactccataaatgttttgagtgttttgt 32239409  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggtt 837  Q
    ||||||||||| |||||||    ||| | ||||||||| || ||||| ||| |||| || ||||||| |||||||||    
T  32239410 agtgagaaatcgtgtaaattgacaaatcgagacatcacatgaaggataaaggatatgaagattgaagttcaatggtt 32239486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 735 - 797
Target Start/End: Original strand, 12358697 - 12358759
Alignment:
Q  735 actccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatca 797  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  12358697 actctataggtgttttgagtctttttagtgagaaattatgtaaatctgaaaaacaagacatca 12358759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 740 - 797
Target Start/End: Original strand, 12357574 - 12357631
Alignment:
Q  740 ataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatca 797  Q
    ||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  12357574 ataggtgttttgagtctttttagtgagaaattatgtaaatctgaaaaacaagacatca 12357631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 662 - 864
Target Start/End: Original strand, 12956512 - 12956706
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| |||| || ||||||| |||||| |  |||| | ||||||||| ||||||||||||||||  |||| ||||||||||||        ||    
T  12956512 tcaatggtttgaggaaaatattgtattgttttcactcgagtcatcgtaattcacttttatcctaaatcatgtaactctataggtgttttg--------ta 12956603  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    ||||  |||||| ||||||  |||| ||||| ||||| || || |||||| |||| || | ||||||||||| ||| || ||| |||||| |||||||||    
T  12956604 gtgaagaatcatataaatcgataaaccaagatatcacatgaagaatcaaggatatgaagactgaagatcaattgtttttggaaggttttttaagataata 12956703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 718 - 861
Target Start/End: Complemental strand, 28859275 - 28859131
Alignment:
Q  718 ttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatat 816  Q
    ||||||||||||| |  || ||||| ||||||||||  |||| |||| |||||||||||||||    ||| | | ||||||| || ||||||||| ||||    
T  28859275 ttatcctaaatcacgcaacaccatatgtgttttgagggttttgtagtaagaaatcatgtaaatggacaaacctaaacatcacatgaaggatcaaggatat 28859176  T
Q  817 caatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    ||| ||| |||||||||||||||||||  ||||||||||| ||||    
T  28859175 caagattaaagatcaatggttcttagatggtttttgaagacaata 28859131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 2687692 - 2687759
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    ||||||||||||||||| | ||||||||| ||||||||  |||| |||||||||||||||||||||||    
T  2687692 ttcattcaataatatttcaaagagttttctcaatttcttgtggattctagaaccctattttcacaagt 2687759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 665 - 933
Target Start/End: Complemental strand, 13530194 - 13529926
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtt-tatcctaaatcatgagactccataggtgttttgagtctttttagt 763  Q
    |||||||| ||||||||||||||| ||||||||  |||| ||| ||||||  || | |||| |||||||  |||||||| || |||| ||  |||||| |    
T  13530194 atggtttgaggaacattttgtattgttttcattcaagtctttgaaattcaatttatttcct-aatcatgcaactccatatgtattttaagcttttttatt 13530096  T
Q  764 gagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaa-gtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatac 862  Q
    || |||||||||||||| ||||| ||||||| ||  |  |||||||| | |||| || | |||| ||||||| |||||| ||  ||||| |||  |||||    
T  13530095 gaaaaatcatgtaaatcggtaaagcaagacaccatataaaggatcaagggatatgaagaatgaaaatcaatgattcttataagctttttaaaggcaatac 13529996  T
Q  863 aagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaa 933  Q
    |||| |||  ||||||||| ||| |||||  ||||||||||| | | ||||||| |||||| || ||||||    
T  13529995 aagttggg-gaaattcatcccaaattccaaggcatttcaagacgaaagaacgcttgaaaaaggaggaaaaa 13529926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 665 - 933
Target Start/End: Complemental strand, 13619733 - 13619465
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtt-tatcctaaatcatgagactccataggtgttttgagtctttttagt 763  Q
    |||||||| ||||||||||||||| ||||||||  |||| ||| ||||||  || | |||| |||||||  |||||||| || |||| ||  |||||| |    
T  13619733 atggtttgaggaacattttgtattgttttcattcaagtctttgaaattcaatttatttcct-aatcatgcaactccatatgtattttaagcttttttatt 13619635  T
Q  764 gagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaa-gtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatac 862  Q
    || |||||||||||||| ||||| ||||||| ||  |  |||||||| | |||| || | |||| ||||||| |||||| ||  ||||| |||  |||||    
T  13619634 gaaaaatcatgtaaatcggtaaagcaagacaccatataaaggatcaagggatatgaagaatgaaaatcaatgattcttataagctttttaaaggcaatac 13619535  T
Q  863 aagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaa 933  Q
    |||| |||  ||||||||| ||| |||||  ||||||||||| | | ||||||| |||||| || ||||||    
T  13619534 aagttggg-gaaattcatcccaaattccaaggcatttcaagacgaaagaacgcttgaaaaaggaggaaaaa 13619465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 445 - 502
Target Start/End: Complemental strand, 24578909 - 24578852
Alignment:
Q  445 aataatattttagagagttttcacaatttctgctggactctagaaccctattttcaca 502  Q
    |||||||||||||||||||||||||||||||  |||| || |||||||||||||||||    
T  24578909 aataatattttagagagttttcacaatttctagtggattccagaaccctattttcaca 24578852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 662 - 864
Target Start/End: Complemental strand, 22894622 - 22894421
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| || |||| ||||||| ||| || |  | || |||| |||||| |||||| || |||||   ||||||||||| |||| ||| || | |    
T  22894622 tcaatggtttgaggtacatattgtattctttacactcgaatcattgtgattcacttttatcttagatcattcaactccataggtatttttagtgttctat 22894523  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    |||||||||||||||||||| | ||| ||||| ||||| || ||||||||  |||| || ||||||  ||||| |||||||||  ||||||||||| |||    
T  22894522 agtgagaaatcatgtaaatc-gaaaatcaagatatcacatgaaggatcaatgatataaagattgaa-ttcaattgttcttagatggtttttgaagacaat 22894425  T
Q  861 acaa 864  Q
    ||||    
T  22894424 acaa 22894421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 438 - 503
Target Start/End: Original strand, 14130115 - 14130180
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaa 503  Q
    |||||||||||||||||| |||||||||| ||||||||| |||| ||  ||||| |||||||||||    
T  14130115 ttcattcaataatattttggagagttttctcaatttctggtggattccggaaccttattttcacaa 14130180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 16598198 - 16598266
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaattt-ctgctggactctagaaccctattttcacaagt 505  Q
    ||||||||||||||||||||||||||||| |||||| ||| || | | | |||||||||||||||||||    
T  16598198 ttcattcaataatattttagagagttttctcaatttactggtgtattttggaaccctattttcacaagt 16598266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 796
Target Start/End: Original strand, 26882486 - 26882566
Alignment:
Q  717 tttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatc 796  Q
    ||||||||| ||||||  |||||||||||||||||| | |||| ||||||| ||||||||||||||  ||| |||||||||    
T  26882486 tttatcctagatcatgcaactccataggtgttttgattgttttgtagtgaggaatcatgtaaatcatcaaatcaagacatc 26882566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 707 - 778
Target Start/End: Original strand, 31232124 - 31232193
Alignment:
Q  707 gtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaa 778  Q
    ||||||||  ||||||||||||||||  ||||||||||||||||| || ||||||||  |||||||||||||    
T  31232124 gtaattcagctttatcctaaatcatgcaactccataggtgttttgcgtttttttagt--gaaatcatgtaaa 31232193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 16598116 - 16598183
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    ||||||||||||||||||||||||||||| || |||||| || | |   |||||||||||||||||||    
T  16598116 ttcattcaataatattttagagagttttctcagtttctggtgtatttcggaaccctattttcacaagt 16598183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 438 - 481
Target Start/End: Complemental strand, 24577667 - 24577624
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctgga 481  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  24577667 ttcattcaataatattttagagagttttctcaatttctggtgga 24577624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 24730982 - 24731049
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    ||||||||||||||||||||||||||||| |||||| || |||| ||   || |||||||||||||||    
T  24730982 ttcattcaataatattttagagagttttctcaatttttgatggattccgaaatcctattttcacaagt 24731049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 438 - 481
Target Start/End: Original strand, 30440687 - 30440730
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctgga 481  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  30440687 ttcattcaataatattttagagagttttctcaatttctggtgga 30440730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 669 - 759
Target Start/End: Complemental strand, 5570226 - 5570136
Alignment:
Q  669 tttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt 759  Q
    |||| ||||||| ||||||| |||||| |  ||| |||||||||||| ||||||||| ||||||  ||| | |||||||||||||| ||||    
T  5570226 tttgaggaacatattgtattgttttcactcgagttgttgtaattcacttttatcctatatcatgcaacttcgtaggtgttttgagtgtttt 5570136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 662 - 742
Target Start/End: Complemental strand, 14977199 - 14977118
Alignment:
Q  662 tcaatggtttgtggaacattttgtattatttt-cattttagtcgttgtaattcacgtttatcctaaatcatgagactccata 742  Q
    ||||||||||| ||||||| ||||||| |||| || |  |||| ||||||||||| ||||||||||||||||  ||||||||    
T  14977199 tcaatggtttgaggaacatattgtattgtttttcactcgagtcattgtaattcacttttatcctaaatcatgcaactccata 14977118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 442 - 503
Target Start/End: Original strand, 20693753 - 20693814
Alignment:
Q  442 ttcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaa 503  Q
    |||||||||| |||||||||||||| ||||||||| |||| ||  ||||| |||||||||||    
T  20693753 ttcaataatactttagagagttttctcaatttctgatggattccggaaccatattttcacaa 20693814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Original strand, 26377981 - 26378018
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttct 475  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  26377981 ttcattcaataatattttagagagttttctcaatttct 26378018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 438 - 498
Target Start/End: Original strand, 30442477 - 30442537
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctatttt 498  Q
    ||||||||||||||||||| ||||||||| ||||||||  |||| | ||||| ||||||||    
T  30442477 ttcattcaataatattttaaagagttttctcaatttctaatggattttagaatcctatttt 30442537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 2609634 - 2609567
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    ||||||||||||||||| |||||| |||  ||||||||| || | |||  ||||||||||||||||||    
T  2609634 ttcattcaataatatttcagagagctttatcaatttctggtgaattctgtaaccctattttcacaagt 2609567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 959 - 1014
Target Start/End: Original strand, 23876516 - 23876571
Alignment:
Q  959 ctcctcctcctcttgttctctctatggtatgtttttctattattttatgatgatgt 1014  Q
    |||||| |||||||||||| |||| |||||||||||||||| |||| | |||||||    
T  23876516 ctcctcatcctcttgttctatctacggtatgtttttctattgttttgtaatgatgt 23876571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 775
Target Start/End: Complemental strand, 41505623 - 41505516
Alignment:
Q  668 gtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgaga 767  Q
    ||||| |||| |||||||||||||||||||  ||| |||||||||||| || || |  |||||||  ||| |||||  || ||||||||||||| ||  |    
T  41505623 gtttgaggaatattttgtattattttcattcgagttgttgtaattcactttcatacctaatcatgcaacttcatagacgtgttgagtctttttattgcta 41505524  T
Q  768 aatcatgt 775  Q
    ||||||||    
T  41505523 aatcatgt 41505516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 963 - 1004
Target Start/End: Complemental strand, 22892779 - 22892738
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattatttt 1004  Q
    |||| ||||||||||||||| |||||||||||||||| ||||    
T  22892779 tccttctcttgttctctctagggtatgtttttctattttttt 22892738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 662 - 751
Target Start/End: Complemental strand, 28901432 - 28901343
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttg 751  Q
    ||||||||||| ||||||| ||||||| |||||| |  ||||||||||||||   ||||||||| || |||  ||||| ||| |||||||    
T  28901432 tcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaattcgtttttatcctagataatgcaactccttagatgttttg 28901343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 735 - 811
Target Start/End: Complemental strand, 29047338 - 29047261
Alignment:
Q  735 actccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaag 811  Q
    ||||||||  |||||||||| |||| ||||||| ||||||||||||||  ||  |||||||||| ||| |||||||||    
T  29047338 actccatatatgttttgagtgttttgtagtgaggaatcatgtaaatcataaattcaagacatcatgtgaaggatcaag 29047261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 963 - 1004
Target Start/End: Complemental strand, 30850592 - 30850551
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattatttt 1004  Q
    ||||||| |||||||||||| |||||||||||||||| ||||    
T  30850592 tcctcctattgttctctctagggtatgtttttctattgtttt 30850551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 7e-61; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 662 - 945
Target Start/End: Original strand, 26102080 - 26102363
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||| ||||||||||| ||||||||  ||| |||||||||||| ||||||||||||||||  ||||||| |||||||||||||||||||    
T  26102080 tcaatggtttgaggaccattttgtattgttttcattcgagttgttgtaattcacttttatcctaaatcatgcaactccatgggtgttttgagtcttttta 26102179  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    |||||| ||| || |||||   |||||||||||||||||| | ||||||| |||| || | |||||||||||| || |||||| ||||||||||| ||||    
T  26102180 gtgagatatcgtgcaaatcgacaaaacaagacatcacgtgaatgatcaaggatatgaagaatgaagatcaatgatttttagaaggtttttgaagacaata 26102279  T
Q  862 caagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaatgcaaaattcac 945  Q
    ||||| | | ||||||||||||||||| ||  | |||||||||  || ||||||||  ||||  ||||||| ||||||||||||    
T  26102280 caagttgaggaaaattcatctcaagtttcaaggaatttcaagactgaagaacgctcagaaaagaacgaaaactgcaaaattcac 26102363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 674 - 922
Target Start/End: Original strand, 31313587 - 31313835
Alignment:
Q  674 ggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcat 773  Q
    ||||| ||||||||| ||||| ||  |||||||||||||||| ||||||||||||||||  ||| |||||||||||||||| |||||||| |||||||||    
T  31313587 ggaacgttttgtattgttttcgttcaagtcgttgtaattcacttttatcctaaatcatgcaacttcataggtgttttgagtttttttagtaagaaatcat 31313686  T
Q  774 gtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaa 873  Q
    ||||||  | ||||||| |||||||||| ||||| ||| |||| || | |||||||||||| |||||| || ||||||||||| |||||||||  |||||    
T  31313687 gtaaattggaaaaacaatacatcacgtgaaggattaagaatatgaagaatgaagatcaatgattcttataaggtttttgaagacaatacaagttaggaaa 31313786  T
Q  874 aattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaa 922  Q
    |||| |||  ||||||||  ||||||||||| ||| |||| || |||||    
T  31313787 aattaatcctaagttccaaggcatttcaagacggaagaacacttgaaaa 31313835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 669 - 923
Target Start/End: Complemental strand, 27461266 - 27461011
Alignment:
Q  669 tttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaa 768  Q
    |||| ||||||||||||||| ||||||||  ||| ||| |||||||| |||||||||||| |||  ||| |||||||||||  |||||||||||| ||||    
T  27461266 tttgaggaacattttgtattgttttcattcaagttgttataattcacttttatcctaaattatgcaacttcataggtgtttgtagtctttttagtaagaa 27461167  T
Q  769 atcatgtaaatcag-taaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtc 867  Q
    ||||||||| || |  ||||||||||||||| || | |||| || |||| ||   ||||||||||||||||||| || ||||||||||| |||||||||     
T  27461166 atcatgtaagtcggaaaaaacaagacatcacatgaaagatcgaggatatgaagtatgaagatcaatggttcttaaaaggtttttgaagacaatacaagtt 27461067  T
Q  868 gggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa 923  Q
     || || ||||||| |||||||||  ||||||||||| | | ||||||||||||||    
T  27461066 tgggaatattcatcacaagttccaaggcatttcaagacgaaagaacgctcgaaaaa 27461011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 662 - 864
Target Start/End: Original strand, 30675507 - 30675709
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| ||||||| ||||||| |||||| |  |||||||||||| ||| ||| ||||| ||||||  |||||||||||||||||||| |||| |    
T  30675507 tcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaatacacttttgtcctatatcatgcaactccataggtgttttgagtgttttat 30675606  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    |||||||||||||||||||| | ||   ||||||||| ||| ||||||||| || | || |||||| ||||||||||||||||| |||||||||||||||    
T  30675607 agtgagaaatcatgtaaatcggcaatttaagacatcatgtgaaggatcaagaatgtgaagattgaa-atcaatggttcttagaaggtttttgaagataat 30675705  T
Q  861 acaa 864  Q
    ||||    
T  30675706 acaa 30675709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 662 - 864
Target Start/End: Complemental strand, 11770086 - 11769883
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttt- 760  Q
    ||||||||||  ||||||| ||||||| |||||| |   ||||||||||||||| ||||||||||||||||| ||| ||| ||||| |||||| ||||      
T  11770086 tcaatggtttaaggaacatattgtattgttttcactcgtgtcgttgtaattcacttttatcctaaatcatgaaacttcatgggtgtgttgagtgttttgc 11769987  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    ||||||||||||||||||||   ||| ||||||||||| || | ||||||  |||| || |||||||| ||||||||||||||| ||||||||||| |||    
T  11769986 agtgagaaatcatgtaaatcgaaaaatcaagacatcacatgaatgatcaaagatatgaagattgaagaccaatggttcttagaaggtttttgaagacaat 11769887  T
Q  861 acaa 864  Q
    ||||    
T  11769886 acaa 11769883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 662 - 904
Target Start/End: Original strand, 18795204 - 18795447
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||||||||||||  ||||||||| |||  |||||||| || |||||||||| ||||    || ||||||||||||||||| |||||    
T  18795204 tcaatggtttgaggaacattttgtatcgttttcatttgagtaattgtaatttacttttatcctaagtcatacagcttcataggtgttttgagtcatttta 18795303  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaag-tttttgaagataat 860  Q
    |||||||||| |||||||||| ||||||||||||||| ||  |||||||  |||| || | ||||||| |||| ||||  ||| | ||||| |||| |||    
T  18795304 gtgagaaatcgtgtaaatcagcaaaacaagacatcacatgatggatcaaagatatgaaaagtgaagatgaatgattctatgaaggtttttttaagacaat 18795403  T
Q  861 acaagtcgggaaaaattcatctcaagttccattgcatttcaaga 904  Q
    |||||| ||| |||| |||||  ||||||||  |||||||||||    
T  18795404 acaagttggggaaaaatcatccaaagttccaaggcatttcaaga 18795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 682 - 856
Target Start/End: Complemental strand, 25727981 - 25727806
Alignment:
Q  682 ttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatc 780  Q
    ||||||| |||||| | || |||||||||||||| ||||||||||||||||  |||| ||||||||||||||| |||| |||||||||||||||||||||    
T  25727981 ttgtattgttttcactctaatcgttgtaattcacttttatcctaaatcatgcaactcaataggtgttttgagtgttttgtagtgagaaatcatgtaaatc 25727882  T
Q  781 agtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaaga 856  Q
       ||| ||| | ||||| || ||||| ||| |||| || |||||||||||||||||||| ||| |||||||||||    
T  25727881 gacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaaga 25727806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 682 - 856
Target Start/End: Complemental strand, 25736389 - 25736214
Alignment:
Q  682 ttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatc 780  Q
    ||||||| |||||| | || |||||||||||||| ||||||||||||||||  |||| ||||||||||||||| |||| |||||||||||||||||||||    
T  25736389 ttgtattgttttcactctaatcgttgtaattcacttttatcctaaatcatgcaactcaataggtgttttgagtgttttgtagtgagaaatcatgtaaatc 25736290  T
Q  781 agtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaaga 856  Q
       ||| ||| | ||||| || ||||| ||| |||| || |||||||||||||||||||| ||| |||||||||||    
T  25736289 gacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaaga 25736214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 662 - 940
Target Start/End: Original strand, 18391105 - 18391386
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| | |||||||| |||||||||||||| ||||||||||||| || ||||||||| ||||||  | |||||||| |||| |||| ||||||    
T  18391105 tcaatggtttgagtaacattttatattattttcatttgagtcgttgtaattaacttttatcctagatcatgcaattccataggcgtttagagtattttta 18391204  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttg-aagataat 860  Q
    |  ||||||||||||||| ||  ||| |||||||||| || || || ||| || | || |  |||||||||||||||||| || ||||||  |||| |||    
T  18391205 ggaagaaatcatgtaaattagcgaaataagacatcacatgaagaatgaaggatttaaaaaacgaagatcaatggttcttaaaaggtttttttaagacaat 18391304  T
Q  861 acaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaa--gacgaaaaatgcaaaa 940  Q
    ||||   |  ||||| | |||||||||||||  | ||||||| ||||| |||| ||||||||||  |||||||| |||||||    
T  18391305 acaaaatgaaaaaaaattatctcaagttccaaggtatttcaaaatggaggaacactcgaaaaaagggacgaaaactgcaaaa 18391386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 664 - 913
Target Start/End: Complemental strand, 26854407 - 26854160
Alignment:
Q  664 aatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagt 763  Q
    |||| |||| ||||| ||||||||| ||||||||  |||||||||||||||  |||||||||| ||||   ||| ||||| |||||||||||||||||      
T  26854407 aatgttttgaggaactttttgtattcttttcattcaagtcgttgtaattcaattttatcctaattcatacaacttcatagatgttttgagtcttttta-- 26854310  T
Q  764 gagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataataca 863  Q
    ||||||||||||||| | | |||||||||||| | ||| ||||||||  |||| || ||||||| ||||||||||||||||  | |||||||| ||||||    
T  26854309 gagaaatcatgtaaaccggcaaaacaagacattaagtgaaggatcaatgatatgaagattgaagttcaatggttcttagaagatatttgaagacaataca 26854210  T
Q  864 agtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaac 913  Q
    |   |   ||||||||| | ||||||||  ||||| ||||||||| ||||    
T  26854209 aagtgaagaaaattcatttgaagttccaaggcattgcaagatggaagaac 26854160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 690 - 864
Target Start/End: Complemental strand, 52271308 - 52271134
Alignment:
Q  690 ttttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaaca 789  Q
    ||||||||| ||||||||| |||||| ||  |||||||| |||  ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||    
T  52271308 ttttcatttaagtcgttgtcattcactttattcctaaattatgcaactccatagatgttttgagtctttttagtgagaaattatgtaaatcggcaaaaca 52271209  T
Q  790 agacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    | ||  |||||| |||||| || |||| || ||||||| |||||||| ||||||| || |||||||| |||||||    
T  52271208 aaacgccacgtgaaggatcgaggatatgaagattgaagttcaatggtacttagaaggtatttgaagacaatacaa 52271134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 662 - 864
Target Start/End: Complemental strand, 19257895 - 19257695
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    |||||| |||| ||||| || |||||| |||||||| ||||| |||||||||   ||||||||||||||||  | ||| |||||||||||||| ||||||    
T  19257895 tcaatgatttgaggaactttctgtattgttttcattctagtcattgtaattcgattttatcctaaatcatgcaagtccttaggtgttttgagtattttta 19257796  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    |||||||||| |||||||  | | ||||||||||||| || | |||| || |||| || |||||| |||||  |||||||||| || |||||||| ||||    
T  19257795 gtgagaaatcgtgtaaattggcataacaagacatcacatgaaagatcgaggatatgaagattgaacatcaa--gttcttagaaggtctttgaagacaata 19257698  T
Q  862 caa 864  Q
    |||    
T  19257697 caa 19257695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 665 - 904
Target Start/End: Original strand, 21548674 - 21548913
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtg 764  Q
    |||||||| | ||| |||| |||| ||||||||  |||||||||||||||  |||||||||||  |||  |||||||| |||||| |||||||| |||||    
T  21548674 atggtttgagaaactttttatattgttttcattcgagtcgttgtaattcagttttatcctaaaaaatgcaactccataagtgtttggagtctttctagtg 21548773  T
Q  765 agaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
     ||||||| ||||||| | |||||||||||||||||  || ||   | |||| || ||||||| | ||||||||||||||    ||||||||||||||||    
T  21548774 tgaaatcaagtaaatcggaaaaacaagacatcacgtaaagaattgtggatatgaagattgaagctaaatggttcttagaagacatttgaagataatacaa 21548873  T
Q  865 gtcgggaaaaattcatctcaagttccattgcatttcaaga 904  Q
    || |  |||||||||| | ||||||||  ||||| |||||    
T  21548874 gttgaaaaaaattcatttgaagttccaaggcattacaaga 21548913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 662 - 864
Target Start/End: Original strand, 25126503 - 25126705
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| | ||  ||||||||| |||| |||| |||||| ||||||||  |||||||||||||||| || |  ||| ||||||||||||||||||    
T  25126503 tcaatggtttgagaaattttttgtattgtttttatttgagtcgtggtaattcagttttatcctaaatcatgtgattatatatgtgttttgagtcttttta 25126602  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
     ||||||||||||||||| || |||| ||||||||||||| |||||  || |||| |  | |  |||||||| ||||||||||| | |||||| | ||||    
T  25126603 atgagaaatcatgtaaattagaaaaataagacatcacgtgaaggattgaggatatgacgactacagatcaatagttcttagaaaatctttgaatacaata 25126702  T
Q  862 caa 864  Q
    |||    
T  25126703 caa 25126705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 662 - 841
Target Start/End: Complemental strand, 15298961 - 15298782
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||  ||||||||| | ||||||| | || |||||||| |  ||||||| ||||||||  ||| ||||||||||||| |||| ||||    
T  15298961 tcaatggtttgaggaagtttttgtattgtattcatttgaatcattgtaattaagttttatccaaaatcatgcaacttcataggtgttttgtgtctattta 15298862  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttctta 841  Q
    |||| |||||||||||||| | ||||||||| |||| ||  |||||| || |||| || ||| |||||||||||||||||    
T  15298861 gtgataaatcatgtaaatcggcaaaacaagaaatcatgtaaaggatcgaggatatgaagattcaagatcaatggttctta 15298782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 662 - 863
Target Start/End: Complemental strand, 18301095 - 18300893
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| |||| || ||||| | ||||| ||  ||||||||||||| || ||||||  ||||||||  ||| |||||||||||||||| |||| |    
T  18301095 tcaatggtttgaggaatatattgtactgttttctttaaagtcgttgtaattgacttttatcgaaaatcatgcaacttcataggtgttttgagtgttttaa 18300996  T
Q  762 -gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
     ||||  ||||||||||||    ||| |||||||||||||| ||||||||| |||| || ||| || | ||||||||||||||| ||||||||||| |||    
T  18300995 agtgatgaatcatgtaaatagacaaatcaagacatcacgtgaaggatcaaggatatgaagattaaataccaatggttcttagaaggtttttgaagacaat 18300896  T
Q  861 aca 863  Q
    |||    
T  18300895 aca 18300893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 665 - 881
Target Start/End: Complemental strand, 15417062 - 15416845
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtg 764  Q
    |||||||| | |||||||| |||| ||||||||  | || || |||||||| |||||| |||||||||  |||  ||||||||||||||||||||||  |    
T  15417062 atggtttgagaaacattttttattgttttcattcaattcattttaattcacttttatcttaaatcatgcaactgtataggtgttttgagtctttttatag 15416963  T
Q  765 agaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaa-gtatatcaatattgaagatcaatggttcttagaaagtttttgaagataataca 863  Q
      ||||||||||| || | ||| ||||||| ||| || |||||||| | |||| || | ||||||||||||||||||| || |||||| |||| ||| ||    
T  15416962 tcaaatcatgtaattcggcaaagcaagacaccacatgaaggatcaagggatatgaagaatgaagatcaatggttcttataaggtttttaaagacaatgca 15416863  T
Q  864 agtcgggaaaaattcatc 881  Q
    ||| ||||||| ||||||    
T  15416862 agttgggaaaatttcatc 15416845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 662 - 864
Target Start/End: Complemental strand, 25494571 - 25494378
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||||| |||| || |||||  || |||| |||||||| || ||||||||||||||||  ||| |||||||||||||        ||    
T  25494571 tcaatggtttgaggaacatattgtcttgttttctcttgagtccttgtaatttacttttatcctaaatcatgcaactacataggtgttttg--------ta 25494480  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    |||||||||||||||||||   ||| ||||||||||| |  |||| |||| |||| || |||||||| ||||||||||||||| ||||||||||| ||||    
T  25494479 gtgagaaatcatgtaaatcgacaaatcaagacatcacattaaggagcaag-atatgaagattgaagaccaatggttcttagaaggtttttgaagacaata 25494381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 662 - 811
Target Start/End: Complemental strand, 8247749 - 8247599
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| ||||||| || ||||||||||| || |||| ||||||||    |||| |||| ||||||  |||||||||||||||||||| |||| |    
T  8247749 tcaatggtttgaggaacatattttattattttcacttgagtcattgtaattttgttttaccctagatcatgcaactccataggtgttttgagtgttttgt 8247650  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaag 811  Q
    |||||| ||||||||||||||  ||| |||||||||||||| | |||||||    
T  8247649 agtgaggaatcatgtaaatcaacaaatcaagacatcacgtgaaagatcaag 8247599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 662 - 856
Target Start/End: Original strand, 26657499 - 26657693
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| |||| ||  |||||| |||||| |  | |||||||||||||| ||||||||| |||| |  |||||||||||||||||||| |||| |    
T  26657499 tcaatggtttgaggaatataatgtattgttttcactcgattcgttgtaattcacttttatcctagatcacgcaactccataggtgttttgagtgttttgt 26657598  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaaga 856  Q
    ||||| ||||||||||||||   ||| |||||||| | ||| |||||||||  ||| || || |||| ||||| ||||||| || |||||||||||    
T  26657599 agtgaaaaatcatgtaaatcgacaaatcaagacattaggtgaaggatcaaggctatgaaaatcgaag-tcaatagttcttataaggtttttgaaga 26657693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 682 - 853
Target Start/End: Complemental strand, 25730643 - 25730471
Alignment:
Q  682 ttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatc 780  Q
    ||||||| ||||||||  | || ||| ||||||  ||||||||||||||||  ||| || ||||||||||||| |||| ||| |||||||||||||||||    
T  25730643 ttgtattgttttcattcaaatcattgaaattcaattttatcctaaatcatgcaacttcacaggtgttttgagtgttttgtagcgagaaatcatgtaaatc 25730544  T
Q  781 agtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttga 853  Q
       ||| ||||| ||||| || ||||||||| | || || ||| |||||||||||||||| ||| ||||||||    
T  25730543 gacaaatcaagatatcacatgaaggatcaaggagatgaagatttaagatcaatggttcttggaaggtttttga 25730471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 664 - 837
Target Start/End: Original strand, 34381733 - 34381909
Alignment:
Q  664 aatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt---t 760  Q
    |||||||||  |||||| || |||| ||||||||  |||||||||||||||| | ||| |||||||| |  ||| |||||||||||||||| ||||   |    
T  34381733 aatggtttgaagaacatattatattgttttcattcgagtcgttgtaattcacttctattctaaatcacgcaacttcataggtgttttgagtattttgtat 34381832  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggtt 837  Q
    ||||| |||| |||||||||   ||| ||| |||||||||| | ||||||| |||| ||  ||||||||||||||||    
T  34381833 agtgaaaaataatgtaaatcgacaaatcaaaacatcacgtgaaagatcaaggatatgaagtttgaagatcaatggtt 34381909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 826 - 923
Target Start/End: Complemental strand, 34935262 - 34935166
Alignment:
Q  826 agatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa 923  Q
    ||||||||| |||||| || ||||||||||||||||||||| ||| |||||||||| ||||||| |  ||||||||||| |||||||| |||||||||    
T  34935262 agatcaatg-ttcttataaggtttttgaagataatacaagttggggaaaattcatcccaagttctaaggcatttcaagacggatgaacactcgaaaaa 34935166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 705 - 864
Target Start/End: Original strand, 30781826 - 30781985
Alignment:
Q  705 ttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtgga 803  Q
    ||||||||||  ||||||| | |||||   |||||||||||||||||||| |||| ||||||| ||||||||||||||  ||| |||||||||| ||| |    
T  30781826 ttgtaattcagttttatccaagatcatacaactccataggtgttttgagtgttttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaa 30781925  T
Q  804 ggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    |||||||| ||   |  |||||||||||| |||||||| || ||| ||||||| |||||||    
T  30781926 ggatcaaggat-gaagaattgaagatcaagggttcttaaaaggttgttgaagacaatacaa 30781985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 662 - 864
Target Start/End: Original strand, 50047204 - 50047400
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    |||||| |||| | ||||| ||||||| |||||| |  |||| | ||||||||| |||||||||||||||   ||||||||  |||||||||| |||| |    
T  50047204 tcaatgatttgagaaacatattgtattgttttcactcgagtcatggtaattcacttttatcctaaatcatacaactccatatatgttttgagtgttttgt 50047303  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    || ||||||||||||||   |||     |||| |||||||| |||||||||  ||| ||||||||||||||||||| |||| || ||| ||||||| |||    
T  50047304 agcgagaaatcatgtaa---agt----gaagaaatcacgtgaaggatcaagggtatgaatattgaagatcaatggtacttaaaaggttattgaagacaat 50047396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 813 - 932
Target Start/End: Complemental strand, 31319551 - 31319433
Alignment:
Q  813 atatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaa 912  Q
    |||| |||| ||||||||||||||||||||||  |||||||||| ||| |||||||||  ||||| ||| |||||| ||  |||||||||||||||  ||    
T  31319551 atatgaataatgaagatcaatggttcttagaagttttttgaagacaatgcaagtcggg-gaaatttatcccaagtttcaaggcatttcaagatggaaaaa 31319453  T
Q  913 cgctcgaaaaaagacgaaaa 932  Q
    ||||||||||| || |||||    
T  31319452 cgctcgaaaaaggatgaaaa 31319433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 666 - 759
Target Start/End: Complemental strand, 13807840 - 13807747
Alignment:
Q  666 tggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt 759  Q
    |||||||  |||||||||||||| ||||||||  ||||||||||||||||||| ||||  |||||||  ||| ||||| |||||||||||||||    
T  13807840 tggtttgatgaacattttgtattgttttcattcaagtcgttgtaattcacgttcatccctaatcatgcaacttcatagttgttttgagtctttt 13807747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 12944066 - 12944133
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| || ||||||||||||| ||||||    
T  12944066 ttcattcaatattattttagagagttttctcaatttctggtggattccagaaccctatttttacaagt 12944133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 662 - 890
Target Start/End: Original strand, 23223434 - 23223665
Alignment:
Q  662 tcaatggtttgtggaacattttgtattatttt-cattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt- 759  Q
    ||||||||||| ||||||  ||||||| |||| || |  | ||||||||||| || ||||||||||||||||  |||||| ||||||||| | | ||||     
T  23223434 tcaatggtttgaggaacacattgtattttttttcactcgattcgttgtaatttacttttatcctaaatcatgcaactccaaaggtgtttttaatgttttg 23223533  T
Q  760 tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaag-tttttgaagata 858  Q
    ||||||||||||||||||||||  ||  ||||||||| | || ||  ||||| |||| || |||||| | ||||  ||| ||||| | |||||||||| |    
T  23223534 tagtgagaaatcatgtaaatcaacaagtcaagacatcgcatgaagattcaaggatatgaagattgaaaaccaataattcatagaaggttttttgaagaca 23223633  T
Q  859 atacaagtcgggaaaaattcatctcaagttcc 890  Q
    ||||||   |  |||||||||| |||||||||    
T  23223634 atacaaagtgaaaaaaattcatttcaagttcc 23223665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 438 - 500
Target Start/End: Complemental strand, 8967943 - 8967881
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttca 500  Q
    ||||||||||||||||| |||||||||||||||||| || |||| ||| ||||||||||||||    
T  8967943 ttcattcaataatatttcagagagttttcacaatttttggtggattctggaaccctattttca 8967881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 760 - 861
Target Start/End: Complemental strand, 23519761 - 23519661
Alignment:
Q  760 tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataa 859  Q
    |||||||||||||||||||||   | | |||||||| ||||| ||||||||| |||| || |||||||| ||||||||||||||| ||| ||||||| ||    
T  23519761 tagtgagaaatcatgtaaatcgacacatcaagacattacgtgaaggatcaagaatatgaa-attgaagaccaatggttcttagaaggttgttgaagacaa 23519663  T
Q  860 ta 861  Q
    ||    
T  23519662 ta 23519661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 755 - 906
Target Start/End: Original strand, 25373862 - 25374013
Alignment:
Q  755 ctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaa 854  Q
    |||||||| ||||||| ||||||||| | |||| || ||||||  || |||||| || |||| || ||| |||| ||||||||||||||| ||| || ||    
T  25373862 ctttttagagagaaataatgtaaatcggcaaaagaaaacatcaattgaaggatccaggatatgaagattaaagaccaatggttcttagaaggttgtttaa 25373961  T
Q  855 gataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatg 906  Q
    || ||||||||  |   ||||||||| |||||||| |  |||||||||||||    
T  25373962 gacaatacaagatgaagaaaattcatttcaagttcaaaagcatttcaagatg 25374013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 50713663 - 50713730
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||||||||||| |||||||||| ||||||||| |||| ||   ||||||||||||||||||    
T  50713663 ttcattcaataatatttttgagagttttctcaatttctggtggattccgaaaccctattttcacaagt 50713730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 662 - 732
Target Start/End: Original strand, 12810345 - 12810415
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatg 732  Q
    ||||||||||| ||||||| ||||||| ||||||||  |||||||||||||||  ||||||||| ||||||    
T  12810345 tcaatggtttgaggaacatattgtattgttttcattcaagtcgttgtaattcatttttatcctagatcatg 12810415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 9030966 - 9031034
Alignment:
Q  438 ttcattcaataatattttagag-agttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||||||||||||||| ||||||| |||||| || |||| |||| ||||||||||||| ||||    
T  9030966 ttcattcaataatattttagagaagttttctcaatttatggtggattctacaaccctattttcataagt 9031034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 496
Target Start/End: Complemental strand, 9195126 - 9195023
Alignment:
Q  396 cctagcatttaagcttaacatttgtaacctaacagac-agtttt--tcattcaataatattttagagagttttcacaatttctgctggactctagaaccc 492  Q
    ||||| |||||||||||||||||||| ||||| |||| | ||||  ||||||||||||| |||||||||||||  |||||| || |||| | | ||||||    
T  9195126 cctagtatttaagcttaacatttgtagcctaagagacgacttttattcattcaataatactttagagagttttttcaatttttggtggattattgaaccc 9195027  T
Q  493 tatt 496  Q
    ||||    
T  9195026 tatt 9195023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 963 - 1015
Target Start/End: Original strand, 21549225 - 21549277
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgtc 1015  Q
    |||||||||||||||||||| |||||||||||||||| |||| | ||||||||    
T  21549225 tcctcctcttgttctctctagggtatgtttttctattgttttgtaatgatgtc 21549277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 8221438 - 8221505
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||| |||||| | ||||||||| ||||||||| |||| || ||||||||||||||| ||||    
T  8221438 ttcattcaatgatatttcaaagagttttctcaatttctggtggattccagaaccctattttcataagt 8221505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 10927105 - 10927209
Alignment:
Q  402 atttaagcttaacatttgtaacctaacagacagttttt---cattcaataatattttagagagttttcacaatttctgctggactctagaaccctatttt 498  Q
    |||||| ||||||| ||||| ||||| |||||  ||||   |||| |||||||||||||||||||||| ||||||||| |||| ||  ||||||  ||||    
T  10927105 atttaatcttaacaattgtagcctaagagacaacttttattcattaaataatattttagagagttttctcaatttctggtggattccggaaccc--tttt 10927202  T
Q  499 cacaagt 505  Q
    |||||||    
T  10927203 cacaagt 10927209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 662 - 743
Target Start/End: Original strand, 19884195 - 19884276
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccatag 743  Q
    ||||||||||| ||||| |||| |||| ||||||||  | ||| |||||||| | ||||||||||||||||  |||||||||    
T  19884195 tcaatggtttgaggaaccttttatattgttttcattcgattcgatgtaattctcttttatcctaaatcatgcaactccatag 19884276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 963 - 1015
Target Start/End: Complemental strand, 14744984 - 14744932
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgtc 1015  Q
    ||||| |||||||||||||||| |||||||||||||| |||| | ||||||||    
T  14744984 tcctcttcttgttctctctatgatatgtttttctattgttttgtaatgatgtc 14744932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 760 - 844
Target Start/End: Complemental strand, 23521722 - 23521639
Alignment:
Q  760 tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaa 844  Q
    |||||||||||||||||||||   | | |||||||||||||| ||||| | | |||| || |||||||| |||||||||||||||    
T  23521722 tagtgagaaatcatgtaaatcgacacatcaagacatcacgtgaaggataaggaatatgaa-attgaagaccaatggttcttagaa 23521639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 10925690 - 10925757
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    ||||||||||||||||||||||||||||  ||||||  | |||| || |||||| |||||| ||||||    
T  10925690 ttcattcaataatattttagagagttttttcaattttcggtggattccagaaccatatttttacaagt 10925757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 963 - 1014
Target Start/End: Original strand, 50047663 - 50047714
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgt 1014  Q
    |||||||||||||||||||| ||||||||||| |||| |||| | |||||||    
T  50047663 tcctcctcttgttctctctagggtatgtttttatattgttttgtaatgatgt 50047714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 396 - 481
Target Start/End: Original strand, 50335772 - 50335858
Alignment:
Q  396 cctagcatttaagcttaacatttgtaacctaacagacagtttttcattcaataatattttagag-agttttcacaatttctgctgga 481  Q
    ||||| ||||||||||||||||||||  |||| | ||||||||||||| ||||| ||| | ||| | ||||| ||||||||| ||||    
T  50335772 cctagtatttaagcttaacatttgtagtctaagatacagtttttcatttaataaaattattgagaacttttctcaatttctggtgga 50335858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 435 - 500
Target Start/End: Complemental strand, 8965917 - 8965852
Alignment:
Q  435 tttttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttca 500  Q
    ||||| |||||||||||||| | || |||||| ||||||||| |||| |  |||||||||||||||    
T  8965917 ttttttattcaataatatttcatagtgttttctcaatttctgatggatttcagaaccctattttca 8965852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 963 - 1004
Target Start/End: Original strand, 25778312 - 25778353
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattatttt 1004  Q
    ||||||||| |||||||||| |||||||||||||||| ||||    
T  25778312 tcctcctctcgttctctctagggtatgtttttctattgtttt 25778353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 28660883 - 28660818
Alignment:
Q  441 attcaataatattttagagagttttc-acaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||||||||||||||||||| | | |||||| |||| |   |||||||||||||||||||    
T  28660883 attcaataatattttagagagttttctaaattttctggtggatttcggaaccctattttcacaagt 28660818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 963 - 1004
Target Start/End: Original strand, 34533206 - 34533247
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattatttt 1004  Q
    |||||||||||||||||||| |||||||||||| ||| ||||    
T  34533206 tcctcctcttgttctctctagggtatgtttttcgattgtttt 34533247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 7e-55; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 717 - 945
Target Start/End: Complemental strand, 31859937 - 31859708
Alignment:
Q  717 tttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatat 816  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| |||||| || ||||    
T  31859937 tttatcctaaatcatgcaactgcataggtgttttgagtctttttagtgagaaatcatgtaaatcagcaaaacaagacaccaggtgaaggatcgaggatat 31859838  T
Q  817 caatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgct 916  Q
     ||||||||||||||||||||||||||| || |||||||| |||||||   |   |||||| || ||||||||||  ||||||||||| ||| ||||||     
T  31859837 gaatattgaagatcaatggttcttagaaggtatttgaagacaatacaaagtgaagaaaatttatttcaagttccaaggcatttcaagacggaagaacgcg 31859738  T
Q  917 cgaaaaaa-gacgaaaaatgcaaaattcac 945  Q
     ||||||| |||||||| ||||||||||||    
T  31859737 tgaaaaaaggacgaaaactgcaaaattcac 31859708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 662 - 881
Target Start/End: Original strand, 46647219 - 46647437
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtc-ttttt 760  Q
    ||||||||||   ||| |||||||||| |||||||| |||||| |||||||||| ||||||||||||||||  |||||||| |||||  ||||  |||||    
T  46647219 tcaatggtttcaagaatattttgtattgttttcattctagtcggtgtaattcacttttatcctaaatcatgcaactccataagtgtt--gagttattttt 46647316  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    |  |||||||||| |||||||| ||||||||||||||||||  |||||||  |||| || | ||||||||||||||||||| || |||||| ||||||||    
T  46647317 atcgagaaatcatataaatcagcaaaacaagacatcacgtgagggatcaaagatatgaaaaatgaagatcaatggttcttaaaaggtttttaaagataat 46647416  T
Q  861 acaagtcgggaaaaattcatc 881  Q
    |||||| ||| ||||||||||    
T  46647417 acaagttggggaaaattcatc 46647437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 662 - 842
Target Start/End: Original strand, 9288233 - 9288413
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||||  ||||||| ||||||||| |||| || |||||||  |||||| |||||||||   ||||||| || |||| ||||||||||    
T  9288233 tcaatggtttgaggaacaaattgtattgttttcatttgagtcattataattcatttttatcataaatcatgtacctccatatgtttttttagtcttttta 9288332  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttag 842  Q
    ||||||||||||||||||| | |||||||||||||| ||| ||||||||| |||| || |||||||| |||||||||||||    
T  9288333 gtgagaaatcatgtaaatcggcaaaacaagacatcaagtgaaggatcaaggatatgaagattgaagaccaatggttcttag 9288413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 669 - 856
Target Start/End: Original strand, 15192233 - 15192420
Alignment:
Q  669 tttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgaga 767  Q
    |||||||||||| ||||||| |||||| |  ||| |||||||||||| ||||||||| ||| ||   ||||||||||||||||||| |||| ||||||||    
T  15192233 tttgtggaacatattgtattgttttcactcaagttgttgtaattcacttttatcctagatcgtgcagctccataggtgttttgagtgttttgtagtgaga 15192332  T
Q  768 aatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaaga 856  Q
    |||||||||||||   ||| |||||||||||||| ||||||||| |||| || |||||||| ||||||||||||||| ||| |||||||    
T  15192333 aatcatgtaaatcgacaaaccaagacatcacgtgaaggatcaaggatatgaa-attgaagaccaatggttcttagaaggttgttgaaga 15192420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 676 - 921
Target Start/End: Original strand, 26159793 - 26160036
Alignment:
Q  676 aacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgt 775  Q
    ||||||||||||| ||||||||  ||||||||||||| |  ||| |||||||| ||   ||| |||| |||||||||||||||||||||| |||||||||    
T  26159793 aacattttgtattgttttcattcgagtcgttgtaatttagttttgtcctaaattatccaacttcatatgtgttttgagtctttttagtgaaaaatcatgt 26159892  T
Q  776 aaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaa 875  Q
    | ||||| |||||||||||||| ||| |||||  || |||| || ||||||||||||||||||||| || || |||||| || | | |||| |   ||||    
T  26159893 agatcagcaaaacaagacatcatgtgaaggattcaggatatgaagattgaagatcaatggttcttataaggtctttgaa-atcaaataagttgaagaaaa 26159991  T
Q  876 ttcatctcaagttccattgcatttcaagatggatgaacgctcgaaa 921  Q
    ||||| ||||||||||  | ||||||||| ||| ||||||||||||    
T  26159992 ttcatttcaagttcca-aggatttcaagacggaagaacgctcgaaa 26160036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 707 - 844
Target Start/End: Original strand, 29437539 - 29437676
Alignment:
Q  707 gtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggagga 806  Q
    ||||||||  ||||||||||||||||  ||| ||||| ||||||||||||||||| |||||||||||||||||| | || ||||||||||||||| ||||    
T  29437539 gtaattcagttttatcctaaatcatgcaacttcatagctgttttgagtctttttaatgagaaatcatgtaaatcggcaagacaagacatcacgtgaagga 29437638  T
Q  807 tcaagtatatcaatattgaagatcaatggttcttagaa 844  Q
    || || |||| || ||||||| ||||||||||||||||    
T  29437639 tcgaggatatgaagattgaagttcaatggttcttagaa 29437676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 662 - 943
Target Start/End: Original strand, 21077256 - 21077537
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| | ||| |||||||||||||| |||  |||||||||| ||||  ||||||  ||||||| | | ||||||||||||||  |||||||||    
T  21077256 tcaatggtttgagaaaccttttgtattatttttattcgagtcgttgtagttcaattttatcacaaatcatcaaattccataggtgtttttggtcttttta 21077355  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatc-aagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    |||| |||||||||||||  | ||||||||||| || |||||||||| |||| ||| |  |||||| ||||||||||||||||| ||  | ||||| |||    
T  21077356 gtgaaaaatcatgtaaattggcaaaacaagacaccaagtggaggatcgaagt-tatgaggattgaatatcaatggttcttagaaggtaatcgaagacaat 21077454  T
Q  861 acaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaatgcaaaattc 943  Q
    |||| | |   ||||||||| ||||||||||  |||||  |||||||| |||  ||| ||||   ||||||| ||||||||||    
T  21077455 acaaattgaataaaattcatttcaagttccaaggcattgaaagatggaagaatactcaaaaaggtacgaaaactgcaaaattc 21077537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 666 - 861
Target Start/End: Original strand, 19601825 - 19602020
Alignment:
Q  666 tggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtg 764  Q
    ||||||| ||||| |||| |||| ||||||||  | | |||||||||||| ||||||||||||||||  ||||||||||| |||| ||  |||| |||||    
T  19601825 tggtttgaggaactttttctatttttttcattcaaattgttgtaattcacttttatcctaaatcatgcaactccataggtatttttagcgttttctagtg 19601924  T
Q  765 agaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    |||||||||||||||||  ||| |||||||||||||| | |||| || |||| |  |||||||| |||||||||||| || ||||||||||| ||||    
T  19601925 agaaatcatgtaaatcaacaaatcaagacatcacgtgaaagatcgaggatatgatgattgaaga-caatggttcttaaaaggtttttgaagacaata 19602020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 665 - 880
Target Start/End: Original strand, 10576479 - 10576694
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtg 764  Q
    ||||||||  |||||||||||||| ||||||||  |||| ||||||||||| ||||| |||||| ||   ||| |||||||||||||| ||||| |||||    
T  10576479 atggtttgaagaacattttgtattgttttcattcgagtcattgtaattcacttttattctaaattatacaacttcataggtgttttgattctttctagtg 10576578  T
Q  765 agaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    |||||| ||||||||| | |||||||||||||| ||| |||||| || |||| || | | |||| | ||| || |||||| ||||||||||  || ||||    
T  10576579 agaaattatgtaaatcggaaaaacaagacatcatgtgaaggatcgaggatatgaagaataaagaactatgatttttagaaggtttttgaaggcaacacaa 10576678  T
Q  865 gtcgggaaaaattcat 880  Q
    ||  || |||||||||    
T  10576679 gttagggaaaattcat 10576694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 674 - 888
Target Start/End: Original strand, 21167764 - 21167979
Alignment:
Q  674 ggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcat 773  Q
    ||||||||||||||| ||||||||  ||| ||||||||| || |||||||||||  |||  ||| ||||||||||||||| |||||||||||||||||||    
T  21167764 ggaacattttgtattgttttcattcgagttgttgtaatttacttttatcctaaaatatgtaacttcataggtgttttgagactttttagtgagaaatcat 21167863  T
Q  774 gtaaatcag-taaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaa 872  Q
    ||||||| |  |||||||||||| ||||| || | | || || | || | |||| ||||||| |||||||||  ||||| || | || |||||| ||| |    
T  21167864 gtaaatcggaaaaaacaagacataacgtgaagtagcgaggatgtgaagaatgaaaatcaatgcttcttagaatatttttaaatacaagacaagttgggga 21167963  T
Q  873 aaattcatctcaagtt 888  Q
    ||||||||| ||||||    
T  21167964 aaattcatcccaagtt 21167979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 705 - 864
Target Start/End: Complemental strand, 34864342 - 34864185
Alignment:
Q  705 ttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtgga 803  Q
    ||||||||||| |||||||||||| |||| |||||||  ||||||||||| |||| |||||||||||||||||||||   ||| |||||||||||||| |    
T  34864342 ttgtaattcacttttatcctaaattatgaaactccat--gtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaa 34864245  T
Q  804 ggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    |||||||  ||||  | ||||||| |||||||||||||||| ||||||| ||| |||||||    
T  34864244 ggatcaaagatatggagattgaag-tcaatggttcttagaaggtttttgtagacaatacaa 34864185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 704 - 864
Target Start/End: Complemental strand, 17026746 - 17026586
Alignment:
Q  704 gttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtgg 802  Q
    |||||||||||| ||||||||| ||||||  |||||||||||||||||||| |||| |||| | ||||||||||||||   |||  |||||||||| ||     
T  17026746 gttgtaattcacttttatcctagatcatgcaactccataggtgttttgagtgttttgtagtcataaatcatgtaaatcgacaaattaagacatcacatga 17026647  T
Q  803 aggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    |||||||||||||| |  ||| ||| | ||||||||||| |||||||||||||| |||||||    
T  17026646 aggatcaagtatatgagaatttaag-ttaatggttcttaaaaagtttttgaagacaatacaa 17026586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 666 - 847
Target Start/End: Original strand, 18444277 - 18444458
Alignment:
Q  666 tggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtga 765  Q
    ||||||| |||||  |||||| | ||||||||  || || |||||||||  |||||||||||||| |  ||||||||||| |||| ||||||||  |||     
T  18444277 tggtttgaggaactctttgtaatgttttcattcgagccgctgtaattcagttttatcctaaatcacgcaactccataggtattttaagtcttttccgtgg 18444376  T
Q  766 gaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagt 847  Q
    ||| ||||||||||| | |||||||||||||||||| |||||| |  |||  || |||||||||||||||||||| ||||||    
T  18444377 gaagtcatgtaaatctgcaaaacaagacatcacgtgaaggatcgatgatacaaagattgaagatcaatggttcttggaaagt 18444458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 662 - 865
Target Start/End: Complemental strand, 25315323 - 25315120
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagt-cttttt 760  Q
    |||||| |||| ||||||| ||||||| |||||| || ||||||||||||| |  ||||||||| ||||||  |||||||| | |||||||||  ||| |    
T  25315323 tcaatgctttgaggaacatattgtattgttttcacttgagtcgttgtaattaagttttatcctagatcatgcaactccatatgggttttgagtaatttgt 25315224  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    |||||| |||||||||||||   ||| ||||||||| | || ||||||||| |||| || ||| ||||| ||||||||||| || ||| ||||||| |||    
T  25315223 agtgaggaatcatgtaaatcgacaaatcaagacatcgcatgaaggatcaaggatatgaa-attaaagataaatggttcttaaaatgttgttgaagacaat 25315125  T
Q  861 acaag 865  Q
    |||||    
T  25315124 acaag 25315120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 665 - 904
Target Start/End: Complemental strand, 13275833 - 13275591
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtg 764  Q
    |||||||| | ||||| ||||||| ||||||||  ||||||| |||||||| || |||| |||||||   ||||  ||||||||||||||||||||| ||    
T  13275833 atggtttgagaaacatgttgtattgttttcattcgagtcgttataattcactttcatcccaaatcatacaactctgtaggtgttttgagtctttttattg 13275734  T
Q  765 agaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaa-gtatatcaatat--tgaagatcaatggttcttagaaagtttttgaagataata 861  Q
      ||||||||||| || | ||| ||| ||| |||  | ||||| || | |||| |||||  |||||||||||||||||| |||  |||||||||| ||||    
T  13275733 ctaaatcatgtaattcggcaaagcaatacaccacacgaaggattaagggatatgaatataatgaagatcaatggttctttgaagttttttgaagacaata 13275634  T
Q  862 caagtcgggaaaaattcatctcaagttccattgcatttcaaga 904  Q
    ||||| ||| |||||||||| | |||| ||  |||||||||||    
T  13275633 caagttggggaaaattcatccctagttacaaggcatttcaaga 13275591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 717 - 939
Target Start/End: Original strand, 33519108 - 33519331
Alignment:
Q  717 tttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatat 816  Q
    |||||| |||||||||  ||| | ||||||||||||||||||||||||||||||||||| |||| | ||| ||| ||||| | || || ||  || ||||    
T  33519108 tttatcttaaatcatgcaacttcgtaggtgttttgagtctttttagtgagaaatcatgtgaatcggcaaatcaaaacatctcttgaagaattgaggatat 33519207  T
Q  817 caatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgct 916  Q
     |  ||||||||||||| |||||||||| || |||||||| ||||||||| |   ||||||||| |||| |||||  ||||||| |||  || |||||||    
T  33519208 gacgattgaagatcaatcgttcttagaaggtctttgaagacaatacaagttgaagaaaattcatttcaaattccaaggcatttccagacagaagaacgct 33519307  T
Q  917 cgaaaaa-agacgaaaaatgcaaa 939  Q
     ||||||  |||||||| ||||||    
T  33519308 tgaaaaatggacgaaaattgcaaa 33519331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 662 - 833
Target Start/End: Original strand, 23353646 - 23353815
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||  ||||| ||||||||| ||||||||  |||||||||||||||  |||||  |||||| ||    | |||  ||||||||||||||||||    
T  23353646 tcaatggtttaaggaactttttgtattgttttcattcgagtcgttgtaattcaattttata-taaatcgtgcacattcatgagtgttttgagtcttttta 23353744  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaat 833  Q
    ||||||||||||||||||| | ||||||||||||||| || |||| |||| |||| || ||| |||||||||    
T  23353745 gtgagaaatcatgtaaatcggcaaaacaagacatcacatgaagga-caaggatatgaagattaaagatcaat 23353815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 740 - 856
Target Start/End: Original strand, 13064527 - 13064643
Alignment:
Q  740 ataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttct 839  Q
    |||||||||||||||| ||||||| |||||||||||||||  | ||| |||||||||||||| ||||||||| |||  |  ||||||| |||||||||||    
T  13064527 ataggtgttttgagtcattttagtaagaaatcatgtaaattggcaaatcaagacatcacgtgaaggatcaaggataagacgattgaagttcaatggttct 13064626  T
Q  840 tagaaagtttttgaaga 856  Q
    ||||  || ||||||||    
T  13064627 tagagggtatttgaaga 13064643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 665 - 923
Target Start/End: Complemental strand, 17339902 - 17339644
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtg 764  Q
    |||| ||| ||||||||||||||  |||||||| ||||| ||||||||||  ||||||||||||||||  | | ||||||||||||||  ||||||||||    
T  17339902 atggattgaggaacattttgtatctttttcattctagtctttgtaattcaattttatcctaaatcatgcaatttcataggtgttttgaagctttttagtg 17339803  T
Q  765 agaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaag-tatatcaatattgaagatcaatggttcttagaaagtttttgaagataataca 863  Q
    ||| ||| ||| ||||   ||| ||||| ||||| || |||||||||  ||||  | | ||||||||| || |||||| ||  |||||||||| ||| ||    
T  17339802 agagatcgtgt-aatcgacaaagcaagatatcacatgaaggatcaagagatatggagaatgaagatcagtgattcttaaaagatttttgaagacaattca 17339704  T
Q  864 agtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa 923  Q
    ||| | | |||||||||| ||| ||  |  ||||||||||| |||  | |||||||||||    
T  17339703 agttgtgtaaaattcatcccaaattttaaggcatttcaagacggaaaagcgctcgaaaaa 17339644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 708 - 865
Target Start/End: Original strand, 5676268 - 5676426
Alignment:
Q  708 taattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttt-agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggagga 806  Q
    |||||||  ||||||||||||  ||  |||||||||||||||||||| ||||| |||||  ||||||||||||   |||| ||||||||||| || ||||    
T  5676268 taattcatttttatcctaaattgtgcaactccataggtgttttgagtattttttagtgatgaatcatgtaaattgataaatcaagacatcacatgaagga 5676367  T
Q  807 tcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaag 865  Q
    ||||| |||| ||  ||||| |  |||| ||||||||| ||||||||||| ||||||||    
T  5676368 tcaaggatattaagtttgaatacaaatgattcttagaaggtttttgaagacaatacaag 5676426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 669 - 933
Target Start/End: Complemental strand, 16442343 - 16442078
Alignment:
Q  669 tttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaa 768  Q
    |||| ||||||||||||||||||||||||  |||  ||||||||    ||  | | ||||||||  |||||||| ||||||||| |||||||| ||| ||    
T  16442343 tttgaggaacattttgtattattttcattcaagttattgtaatttggattatttccaaatcatgcaactccataagtgttttgactctttttaatgataa 16442244  T
Q  769 atcatgtaaatcagtaaaacaagacatcacgtggaggatcaa-gtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtc 867  Q
    ||||||||| || |||||||| ||||   | |||||||| || | || | |||| |||||||| || || ||| ||| ||||||||||| ||||||| |     
T  16442243 atcatgtaattcggtaaaacatgacactgcatggaggattaagggatttgaataatgaagatcgattgtacttggaaggtttttgaagacaatacaattt 16442144  T
Q  868 gggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaa 933  Q
    |||  ||||| |||  ||||||||    ||||||||| ||| |||||||||||||| ||| |||||    
T  16442143 gggggaaatttatccaaagttccaagcaatttcaagacggaagaacgctcgaaaaaggacaaaaaa 16442078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 13990816 - 13990749
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    ||||||||||||||||||||||||||||  ||||||||| |||| || ||||||||||||||||||||    
T  13990816 ttcattcaataatattttagagagttttttcaatttctgatggattccagaaccctattttcacaagt 13990749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 677 - 804
Target Start/End: Original strand, 20044216 - 20044343
Alignment:
Q  677 acattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgta 776  Q
    ||||||| |||| ||||||||  |||| ||||||||||  ||  |||| |||||||  |||||||| || ||||||||||||||| ||| ||||||||||    
T  20044216 acattttatattgttttcattcgagtcattgtaattcaatttcttccttaatcatgcaactccatatgtattttgagtctttttattgaaaaatcatgta 20044315  T
Q  777 aatcagtaaaacaagacatcacgtggag 804  Q
    | |||||||| ||||||| ||| |||||    
T  20044316 attcagtaaagcaagacaccacatggag 20044343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 662 - 856
Target Start/End: Original strand, 27302801 - 27302994
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| ||||||||||||||| |||||| |  |||| ||||||||||  | ||| ||| ||||||  ||| ||| |||||||| ||| |||| |    
T  27302801 tcaatggtttgaggaacattttgtattgttttcactcgagtcattgtaattcaattatatactagatcatgcaacttcat-ggtgtttttagtattttgt 27302899  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaaga 856  Q
    |||||  |||||||||||||   |||  ||||||||||||| | ||||||| |||| || |||||| || || ||||||||||| |||||||||||    
T  27302900 agtgatgaatcatgtaaatcgacaaattaagacatcacgtgcaagatcaaggatatgaa-attgaacattaagggttcttagaaggtttttgaaga 27302994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 745 - 916
Target Start/End: Original strand, 32021900 - 32022069
Alignment:
Q  745 tgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaa 844  Q
    |||||||||| ||||| |||||||||| |||||||  | |||||| |||||    || |||||||||||||| || | ||||||||||||||||  | ||    
T  32021900 tgttttgagtattttttgtgagaaatcctgtaaataggcaaaacatgacattcaatgaaggatcaagtatatgaagaatgaagatcaatggttc-caaaa 32021998  T
Q  845 agtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgct 916  Q
    || ||||||||| ||||||||| |||  ||||||||| ||| || ||  ||||||||||||||| |||||||    
T  32021999 aggttttgaagacaatacaagttggg-gaaattcatcccaaatttcaaggcatttcaagatggaagaacgct 32022069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 396 - 505
Target Start/End: Original strand, 7633985 - 7634097
Alignment:
Q  396 cctagcatttaagcttaacatttgtaacctaacag---acagtttttcattcaataatattttagagagttttcacaatttctgctggactctagaaccc 492  Q
    ||||| |||||||||||||| ||||||| ||| ||   ||  || ||||||||||||||||||||||||||||| ||||||||| |||| || ||||| |    
T  7633985 cctagtatttaagcttaacagttgtaacataagaggaaacttttattcattcaataatattttagagagttttctcaatttctggtggattccagaactc 7634084  T
Q  493 tattttcacaagt 505  Q
    ||||| |||||||    
T  7634085 tatttccacaagt 7634097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 784 - 865
Target Start/End: Complemental strand, 7024188 - 7024107
Alignment:
Q  784 aaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaag 865  Q
    |||||||||||||||||| ||||||||  |||| || |||||||| |||||||||||||||  || ||||||||||||||||    
T  7024188 aaaacaagacatcacgtgaaggatcaaagatatgaagattgaagaccaatggttcttagaagattcttgaagataatacaag 7024107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 662 - 810
Target Start/End: Complemental strand, 9783075 - 9782926
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||| ||||| ||||||| ||||||| |||||| |  | || ||||||||||  |||||  || ||||||  ||||||||||| ||| |||| |||| |    
T  9783075 tcaatagtttgaggaacatattgtattgttttcactcaattcattgtaattcagttttattttagatcatgcaactccataggtttttagagtgttttgt 9782976  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaa 810  Q
    |||||| ||||||||||||||  ||| |||||||||| ||||||||||||    
T  9782975 agtgaggaatcatgtaaatcaacaaatcaagacatcatgtggaggatcaa 9782926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 712 - 864
Target Start/End: Original strand, 17187248 - 17187398
Alignment:
Q  712 tcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaag 811  Q
    |||| ||||||||||||||||  ||| ||||||||||  ||||||||||||||| ||||||||||||||   |||| || |||||| ||| | |||  ||    
T  17187248 tcacttttatcctaaatcatgcaacttcataggtgtt--gagtctttttagtgataaatcatgtaaatcgacaaaataacacatcaagtgaatgattgag 17187345  T
Q  812 tatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
     |||| || ||||||| ||| ||||||||||||  | |||||||| |||||||    
T  17187346 gatatgaagattgaagttcagtggttcttagaagttatttgaagacaatacaa 17187398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 823 - 904
Target Start/End: Original strand, 22343803 - 22343884
Alignment:
Q  823 tgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaaga 904  Q
    |||||| ||||||| |||| ||  |||||||||| ||||||||| |||||||||||||||||||||||| | ||||||||||    
T  22343803 tgaagaccaatggtacttataagttttttgaagaaaatacaagtagggaaaaattcatctcaagttccaatccatttcaaga 22343884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 742 - 864
Target Start/End: Complemental strand, 12111337 - 12111217
Alignment:
Q  742 aggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttctt 840  Q
    ||||||||||||| |||| ||||||||| || ||||||||   ||| |||| ||||||||| ||||||||| |||| |||||||||| ||||||||||||    
T  12111337 aggtgttttgagtgttttgtagtgagaa-tcttgtaaatcgacaaatcaagtcatcacgtgaaggatcaag-atatgaatattgaag-tcaatggttctt 12111241  T
Q  841 agaaagtttttgaagataatacaa 864  Q
    | || |||||| ||||||||||||    
T  12111240 ataaggttttttaagataatacaa 12111217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 662 - 772
Target Start/End: Original strand, 22119669 - 22119779
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||||  ||||| | ||||| ||  |||| |||||||| || |||| || ||||||||  ||| ||||||| |||||||||||||||    
T  22119669 tcaatggtttgaggaacaaattgtaatgttttcgttcgagtcattgtaatttacttttacccaaaatcatgcaactacataggtattttgagtcttttta 22119768  T
Q  762 gtgagaaatca 772  Q
    |||||||||||    
T  22119769 gtgagaaatca 22119779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 676 - 779
Target Start/End: Complemental strand, 10320297 - 10320193
Alignment:
Q  676 aacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgag-tctttttagtgagaaatcatg 774  Q
    ||||| ||||||| |||||| |  |||||||||||||||| ||||||||| | ||||  |||||||||||||||| || | ||| ||||||||||||| |    
T  10320297 aacatattgtattcttttcactcgagtcgttgtaattcacttttatcctagaccatgcaactccataggtgttttaagctttttgtagtgagaaatcagg 10320198  T
Q  775 taaat 779  Q
    |||||    
T  10320197 taaat 10320193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 735 - 786
Target Start/End: Complemental strand, 12243745 - 12243694
Alignment:
Q  735 actccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaa 786  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| |||||    
T  12243745 actcaataggtgttttgagtcattttagtgagaaatcatgtaaatcggtaaa 12243694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 439 - 505
Target Start/End: Complemental strand, 18689659 - 18689593
Alignment:
Q  439 tcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||||||||||| ||||||||| ||||||||| |||| |||  ||||||||||| ||||||    
T  18689659 tcattcaataatattttatagagttttctcaatttctggtggattctgcaaccctatttttacaagt 18689593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 662 - 732
Target Start/End: Original strand, 24925828 - 24925898
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatg 732  Q
    ||||| ||||| | ||||||||||||| ||||||||| ||||| |||||||||| |||||| |||||||||    
T  24925828 tcaatcgtttgagtaacattttgtattgttttcatttgagtcgctgtaattcacttttatcataaatcatg 24925898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 760 - 854
Target Start/End: Complemental strand, 47024758 - 47024665
Alignment:
Q  760 tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaa 854  Q
    |||||||||||||||||||||   ||| ||||||||| | || ||||||||| | || || ||||||| |||||||||||||||| |||||||||    
T  47024758 tagtgagaaatcatgtaaatcgaaaaatcaagacatcgcatgaaggatcaaggacatgaagattgaag-tcaatggttcttagaaggtttttgaa 47024665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 767 - 864
Target Start/End: Complemental strand, 5906749 - 5906652
Alignment:
Q  767 aaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    |||||||||||| |   ||| ||||| ||||| || |||||| || |||| || ||| ||||| |||||||||||||| |||||||||||||||||||    
T  5906749 aaatcatgtaaaccgacaaaccaagatatcacatgaaggatctagaatattaagatttaagattaatggttcttagaaggtttttgaagataatacaa 5906652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 739 - 780
Target Start/End: Complemental strand, 13206690 - 13206649
Alignment:
Q  739 cataggtgttttgagtctttttagtgagaaatcatgtaaatc 780  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  13206690 cataggtgttttgagtcattttagtgagaaatcatgtaaatc 13206649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 438 - 499
Target Start/End: Complemental strand, 13991518 - 13991457
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttc 499  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||| || |||||| |||||||    
T  13991518 ttcattcaataatattttagagagttttctcaaattctggtggattccagaaccttattttc 13991457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 794 - 923
Target Start/End: Original strand, 22119776 - 22119904
Alignment:
Q  794 atcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccatt 893  Q
    |||| ||| ||||| ||| |||| ||||||||||||||||||||||||||  |||||||| || |||| |||| |   |||||| || ||||||||||      
T  22119776 atcaagtgaaggattaaggatatgaatattgaagatcaatggttcttagagggtttttgaggacaataaaagt-gtacaaaattaatttcaagttccaag 22119874  T
Q  894 gcatttcaagatggatgaacgctcgaaaaa 923  Q
     |||| ||||| ||| ||||||||||||||    
T  22119875 tcattgcaagacggaagaacgctcgaaaaa 22119904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 502
Target Start/End: Original strand, 10494853 - 10494917
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcaca 502  Q
    ||||||||||||||||||||||||||||| ||||||||| || | ||  |||| |||||||||||    
T  10494853 ttcattcaataatattttagagagttttctcaatttctggtgaattccggaactctattttcaca 10494917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 963 - 1014
Target Start/End: Original strand, 5676767 - 5676818
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgt 1014  Q
    ||||||||||||||| ||||||||||||||||||||| |||| | |||||||    
T  5676767 tcctcctcttgttctttctatggtatgtttttctattgttttgtaatgatgt 5676818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 9260523 - 9260590
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||| |||||||||| ||||||| ||||||||| |||| |||  |||||||||||| |||||    
T  9260523 ttcattcaattatattttagatagttttctcaatttctggtggattctgaaaccctattttcgcaagt 9260590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 21433702 - 21433635
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    ||||||||||||||||||||||| ||||| |||||| || || | ||| |||||||||||||| ||||    
T  21433702 ttcattcaataatattttagagaattttctcaatttatgatgaattctggaaccctattttcataagt 21433635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 435 - 502
Target Start/End: Complemental strand, 53477356 - 53477289
Alignment:
Q  435 tttttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcaca 502  Q
    ||||||||||||||   ||||||||||||||| ||||||||| |||| |||| ||||| |||||||||    
T  53477356 tttttcattcaatatatttttagagagttttctcaatttctggtggattctaaaaccccattttcaca 53477289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 739 - 888
Target Start/End: Original strand, 30624966 - 30625115
Alignment:
Q  739 cataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatc-aagtatatcaatattgaagatcaatggtt 837  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||   |||  ||||||   ||||||||||| ||| || | || | |||||||||||| |     
T  30624966 cataggtgttttgagtctttttattgaaaaatcatgtaattctacaaagtaagacactgcgtggaggatcaaaggatttgaagaatgaagatcaatgtta 30625065  T
Q  838 cttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagtt 888  Q
    |||| |||| ||||||||| | |||||| | || |||||||||| ||||||    
T  30625066 cttaaaaagattttgaagacagtacaag-ctgggaaaattcatcccaagtt 30625115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 662 - 750
Target Start/End: Complemental strand, 1676387 - 1676299
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgtttt 750  Q
    ||||||||||| ||||||| ||||| | ||||||||  |||  ||||||||||  ||||||||| ||||||  ||||||||| ||||||    
T  1676387 tcaatggtttgaggaacatattgtaatgttttcattcgagtttttgtaattcaattttatcctatatcatgcaactccatagttgtttt 1676299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 662 - 750
Target Start/End: Complemental strand, 1682915 - 1682827
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgtttt 750  Q
    ||||||||||| ||||||| ||||| | ||||||||  |||  ||||||||||  ||||||||| ||||||  ||||||||| ||||||    
T  1682915 tcaatggtttgaggaacatattgtaatgttttcattcgagtttttgtaattcaattttatcctatatcatgcaactccatagttgtttt 1682827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 447
Target Start/End: Original strand, 2880069 - 2880120
Alignment:
Q  396 cctagcatttaagcttaacatttgtaacctaacagacagtttttcattcaat 447  Q
    ||||| |||||||| ||||| ||||| | |||||||||||||||||||||||    
T  2880069 cctagtatttaagcgtaacagttgtagcttaacagacagtttttcattcaat 2880120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 439 - 505
Target Start/End: Complemental strand, 18657180 - 18657114
Alignment:
Q  439 tcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||||||||||| ||||||||| ||||||| | |||| |||  || |||||||| ||||||    
T  18657180 tcattcaataatattttatagagttttctcaatttccggtggattctgaaatcctatttttacaagt 18657114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 745 - 798
Target Start/End: Complemental strand, 6817759 - 6817706
Alignment:
Q  745 tgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcac 798  Q
    ||||||||||| ||||| |||||||||||||||||||  |||  ||||||||||    
T  6817759 tgttttgagtcattttaatgagaaatcatgtaaatcaacaaataaagacatcac 6817706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 961 - 1014
Target Start/End: Original strand, 10577032 - 10577085
Alignment:
Q  961 cctcctcctcttgttctctctatggtatgtttttctattattttatgatgatgt 1014  Q
    |||||||||||||| ||||||| ||||||||||| |||| |||| | |||||||    
T  10577032 cctcctcctcttgtcctctctagggtatgtttttatattgttttgtaatgatgt 10577085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 1e-50; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 662 - 943
Target Start/End: Original strand, 24047405 - 24047686
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||  ||||||||||||||| ||||||||  |||| ||||||||||| |||||||||||| |||  ||||||||||  ||||| ||| |||||    
T  24047405 tcaatggtttaaggaacattttgtattgttttcattcgagtcattgtaattcacttttatcctaaattatgcaactccataggcattttgggtcatttta 24047504  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaa-gtttttgaagataat 860  Q
    |||||||||| |  ||||| | ||||||||||||| | || ||||||||| |||| || | ||||||||||||||||| | ||| |||| |||||| |||    
T  24047505 gtgagaaatcctacaaatcggcaaaacaagacatcccatgaaggatcaaggatatgaagaatgaagatcaatggttctcaaaaaggtttgtgaagacaat 24047604  T
Q  861 acaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaatgcaaaattc 943  Q
    ||||||  || |||||||| | |||||||||  |||||||||||||||  ||||||||||||| ||| |||| ||||||||||    
T  24047605 acaagttagggaaaattcaacccaagttccaaggcatttcaagatggaaaaacgctcgaaaaaggac-aaaactgcaaaattc 24047686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 662 - 891
Target Start/End: Original strand, 17152176 - 17152406
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttt- 760  Q
    ||||||||||| |||| |||||||||||||||||||  ||||||||||||| || |||||| ||| |||||  ||||  || ||||||||||| |||||     
T  17152176 tcaatggtttgaggaatattttgtattattttcattcgagtcgttgtaattaacttttatcgtaattcatgcaactctgtaagtgttttgagtttttttt 17152275  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    ||| |||||||||||||||| | |||||||||||||  ||| ||||||||| |||| || | |||| || |||||||||||||| |||||||||||||||    
T  17152276 agtaagaaatcatgtaaatcggcaaaacaagacatcgtgtgaaggatcaaggatatgaagaatgaatatgaatggttcttagaaggtttttgaagataat 17152375  T
Q  861 acaagtcgggaaaaattcatctcaagttcca 891  Q
    |||||| ||| |||||||||| || ||||||    
T  17152376 acaagttggggaaaattcatcccatgttcca 17152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 662 - 923
Target Start/End: Complemental strand, 21849164 - 21848905
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||||||||||||| ||||| ||| |||| ||||||||||  |||||| |||||||||  ||||||||||  |||||||||||||||    
T  21849164 tcaatggtttgaggaacattttgtattgttttc-tttgagtcattgtaattcagttttatcataaatcatgcaactccataggatttttgagtcttttta 21849066  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    ||||||||| ||||||||| | | ||||||||||||| || ||||||||| |||  |||| |||| |||||||||||||| || ||||| ||| | ||||    
T  21849065 gtgagaaataatgtaaatcggaagaacaagacatcacatgaaggatcaaggataataataatgaaaatcaatggttcttaaaaggttttggaacacaata 21848966  T
Q  862 caagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa 923  Q
    ||||| ||  |||| ||||| ||| || ||  | |||| |||||||||||||||||||||||    
T  21848965 caagttggagaaaactcatc-caaatttcaaggaattttaagatggatgaacgctcgaaaaa 21848905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 662 - 923
Target Start/End: Complemental strand, 18236394 - 18236133
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| | |||| ||| |||| ||||||||  ||| ||| |||||||| |||||| |||||||||  |||||||| || |||||||||||||||    
T  18236394 tcaatggtttgagaaacaatttatattgttttcattcgagttgttataattcacttttatcttaaatcatgcaactccataagtattttgagtcttttta 18236295  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    |||||||||||||||| || | ||||||||||||||| || |||||||   |||| || |||||||  ||||||||||||||| ||| ||||||| ||||    
T  18236294 gtgagaaatcatgtaactcggcaaaacaagacatcacatgaaggatcacaaatatgaagattgaaggccaatggttcttagaaggttgttgaagacaata 18236195  T
Q  862 caagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa 923  Q
    ||||  |   ||||||||| |||||||| |  |||||| |||| ||| ||| | ||||||||    
T  18236194 caagatgaagaaaattcatttcaagttcaaaggcatttaaagacggaagaatgatcgaaaaa 18236133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 664 - 841
Target Start/End: Original strand, 19541062 - 19541239
Alignment:
Q  664 aatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagt 763  Q
    ||||||||| ||||| |||||||||  ||||| |  |||| ||||||||||  ||||||||||||||||  |||||||||||||||||||||||| ||||    
T  19541062 aatggtttgaggaactttttgtatttatttcaatcgagtcattgtaattcagttttatcctaaatcatgcaactccataggtgttttgagtctttctagt 19541161  T
Q  764 gagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttctta 841  Q
    ||||||||||||||||| | |||| ||||||||| ||| |||||| || |||| || |||||||| ||||||||||||    
T  19541162 gagaaatcatgtaaatcggcaaaataagacatcaagtgaaggatcgaggatatgaagattgaagaccaatggttctta 19541239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 674 - 942
Target Start/End: Original strand, 39730482 - 39730751
Alignment:
Q  674 ggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcat 773  Q
    |||||||||| |||  |||| |||  |||||||||||||||| ||||||||||||||||  ||||   ||||||||||||| ||||||||||||||||||    
T  39730482 ggaacattttctatagtttttattcaagtcgttgtaattcacttttatcctaaatcatgcaactctgcaggtgttttgagtatttttagtgagaaatcat 39730581  T
Q  774 gtaaatcagtaaaacaagacatcacgtggaggatcaa-gtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaa 872  Q
     |||||||| ||||||||||||||| || |||||||| | |||| || | ||||||  |||  |||||||||   ||||||||| ||||  ||| ||| |    
T  39730582 ataaatcagcaaaacaagacatcacatgaaggatcaagggatatgaaga-tgaagactaatatttcttagaagaattttgaagacaataagagttgggga 39730680  T
Q  873 aaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaa-gacgaaaaatgcaaaatt 942  Q
    ||||||||| |||||||||  ||||||||||| ||| |||||||  |||||| |||||| | |||||||||    
T  39730681 aaattcatcccaagttccaaggcatttcaagacggaagaacgctaaaaaaaaggacgaacattgcaaaatt 39730751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 712 - 864
Target Start/End: Complemental strand, 27417305 - 27417152
Alignment:
Q  712 tcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaa 810  Q
    |||| ||||||||||||||||  |||||||||||||||| ||| |||| |||||||||||||||||||||   ||| ||||||||||| || ||||||||    
T  27417305 tcacttttatcctaaatcatgcaactccataggtgttttaagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaa 27417206  T
Q  811 gtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
      |||| ||| ||||||| |||||||||| |||| ||||||||| | |||||||    
T  27417205 tgatatgaatgttgaagaccaatggttctaagaaggtttttgaaaacaatacaa 27417152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 665 - 864
Target Start/End: Original strand, 18818723 - 18818927
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtg 764  Q
    |||||||  |||||||||| |||| ||||||||| |||||||| |||| |  |||||| |||||||||  | |||||||  ||||| |||||||||| ||    
T  18818723 atggtttaaggaacattttatattgttttcatttgagtcgttgaaatttagttttatcataaatcatgcaagtccatagacgttttcagtctttttattg 18818822  T
Q  765 agaaatcatgtaaatcagtaaaacaagacatcacgtggaggatca-----agtatatcaatattgaagatcaatggttcttagaaagtttttgaagataa 859  Q
    |||||||||||||||| | |||||||| ||||||||| ||||| |     || |||| || | ||||||| |||||||||||||| || |||||||| ||    
T  18818823 agaaatcatgtaaatcggcaaaacaaggcatcacgtgaaggattaaggataggatatgaaaactgaagattaatggttcttagaaggtctttgaagacaa 18818922  T
Q  860 tacaa 864  Q
    |||||    
T  18818923 tacaa 18818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 662 - 889
Target Start/End: Original strand, 30998794 - 30999021
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| ||||||| ||||||| |||||| || |||||||||| ||||  ||||||||| |||||   |||||||||||||||||||| |||| |    
T  30998794 tcaatggtttgaggaacatattgtattgttttcacttgagtcgttgtacttcagttttatcctagatcatacaactccataggtgttttgagtgttttgt 30998893  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    |||||  | | |||||||||   ||| ||||| |||| ||| ||||||||| ||||  | |||||||||||| ||||||||||| ||| ||||||| |||    
T  30998894 agtgaagagtgatgtaaatcgacaaatcaagatatcaagtgaaggatcaaggatatgta-attgaagatcaagggttcttagaaggttgttgaagacaat 30998992  T
Q  861 acaagtcgggaaaaattcatctcaagttc 889  Q
    ||||   ||  ||||||||| ||||||||    
T  30998993 acaaagtggagaaaattcatttcaagttc 30999021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 662 - 866
Target Start/End: Complemental strand, 21505231 - 21505026
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| ||| ||| ||||||| |||||| |  |||| || ||||| || ||||||||||||||||  ||| | ||| |||||||||| |||| |    
T  21505231 tcaatggtttgaggagcatattgtattgttttcactcgagtctttataatttacttttatcctaaatcatgcaacttcttagatgttttgagtgttttgt 21505132  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    |||||| |||||||||||||  ||||  |||||||||| || | ||||||| || | ||  ||||||| |||||||||| |||| ||||||||||| |||    
T  21505131 agtgaggaatcatgtaaatcgataaattaagacatcacatgaaagatcaaggatgtgaagtttgaagaccaatggttctgagaaggtttttgaagacaat 21505032  T
Q  861 acaagt 866  Q
    ||||||    
T  21505031 acaagt 21505026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 739 - 842
Target Start/End: Complemental strand, 17415177 - 17415075
Alignment:
Q  739 cataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttc 838  Q
    ||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||| |||||| || | || || |||||| |||||||||||    
T  17415177 cataggtgttttgagtctttttagtgagaaatcgtgtaaatcggcaaaacaagacatcacgtgaaggatcgaggacatgaagattgaa-atcaatggttc 17415079  T
Q  839 ttag 842  Q
    ||||    
T  17415078 ttag 17415075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 662 - 796
Target Start/End: Complemental strand, 34063937 - 34063798
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttt- 760  Q
    ||||||||||||||||| ||||||||| ||||||||  ||| ||||||||||||  |||||||||||||||  |||||| | ||||||||||| |||||     
T  34063937 tcaatggtttgtggaactttttgtattgttttcattcgagttgttgtaattcactattatcctaaatcatgcaactccacaagtgttttgagtttttttt 34063838  T
Q  761 ----agtgagaaatcatgtaaatcagtaaaacaagacatc 796  Q
        |||||||| ||||||||||| | |||||||||||||    
T  34063837 tttgagtgagaattcatgtaaatcggcaaaacaagacatc 34063798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 665 - 923
Target Start/End: Original strand, 18117009 - 18117266
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtg 764  Q
    ||||||||  |||||||||||||| ||||||||| |||| ||||||||||| || |||| |||| |||  |||   | |||||||||| ||||||||       
T  18117009 atggtttgacgaacattttgtattgttttcatttgagtcattgtaattcactttaatcc-aaataatgcaactaggttggtgttttgaatctttttaaca 18117107  T
Q  765 agaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    | |||||||||||||| | ||||||||| ||| |||| || ||| || |||| || | ||||||| ||||||||||||||  ||||| |||| | |||||    
T  18117108 aaaaatcatgtaaatcggcaaaacaagatatcgcgtgaagcatcgaggatatgaaaaatgaagataaatggttcttagaatattttttaagacagtacaa 18117207  T
Q  865 gtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa 923  Q
    || ||  ||||||| || ||||| ||   ||||||||||||||| || |||| ||||||    
T  18117208 gttggtgaaaattcttcccaagtcccgaggcatttcaagatggaagagcgctagaaaaa 18117266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 678 - 850
Target Start/End: Complemental strand, 15454606 - 15454443
Alignment:
Q  678 cattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaa 777  Q
    ||||||||||| ||||| ||| |||||||||| ||||  ||||||||||||||||      || ||||||||||||| |||||||||||||||| |||||    
T  15454606 cattttgtattgttttcttttgagtcgttgta-ttcatttttatcctaaatcatg------ca-aggtgttttgagtttttttagtgagaaatcgtgtaa 15454515  T
Q  778 atcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttt 850  Q
    || || ||||||||||||||| || ||||||||| |||| || | | ||||| ||||||||||| ||||||||    
T  15454514 attagcaaaacaagacatcacatgaaggatcaaggatatgaagaataaagataaatggttctta-aaagtttt 15454443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 676 - 866
Target Start/End: Original strand, 31262036 - 31262224
Alignment:
Q  676 aacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgt 775  Q
    ||||||||||||||||||| || | | ||||||||||||  ||||||| ||| ||||  ||| || ||||||||| ||||||||||||||||| |||| |    
T  31262036 aacattttgtattattttctttctggacgttgtaattcagttttatcc-aaaccatgcaacttcacaggtgttttaagtctttttagtgagaattcatct 31262134  T
Q  776 aaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagt 866  Q
    ||||  | ||||||||||| ||| | || |||| || |||| || ||||||||| |||||||||||| | || |||||||| |||| ||||    
T  31262135 aaattggcaaaacaagacaccacat-gaagatcgaggatatgaagattgaagattaatggttcttagtaggtctttgaagacaatataagt 31262224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 747 - 891
Target Start/End: Original strand, 17862518 - 17862662
Alignment:
Q  747 ttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaag 846  Q
    |||||||| |||||||||| |||||||||||||  | |||| |||||||||| || | ||||||| |||| || | |||| |||  ||||||||||||      
T  17862518 ttttgagtttttttagtgaaaaatcatgtaaattggcaaaataagacatcacatgaaagatcaaggatatgaagaatgaaaatcggtggttcttagaatt 17862617  T
Q  847 tttttgaagataatacaagtcgggaaaaattcatctcaagttcca 891  Q
    |||||||||| | ||||||| ||| |||||||||| |||||||||    
T  17862618 tttttgaagacagtacaagttggggaaaattcatcccaagttcca 17862662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 674 - 864
Target Start/End: Original strand, 24188001 - 24188194
Alignment:
Q  674 ggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaat---catgagactccataggtgttttgagtctttt-tagtgagaaa 769  Q
    ||||| ||||||||| | ||||||  |||| |||| |||||| ||||||||||||   |||   |||||| | ||||||||||| |||| ||||||||||    
T  24188001 ggaactttttgtattgtattcattcgagtcattgtgattcacttttatcctaaatattcattcaactccaaatgtgttttgagtattttgtagtgagaaa 24188100  T
Q  770 tcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    |||||||||||    || |||| |||||| || ||||||||| |||| || |||||||| |||| | |||||||||||||||||||| |||||||    
T  24188101 tcatgtaaatcgaccaatcaaggcatcacatgaaggatcaagaatatgaagattgaaga-caatagatcttagaaagtttttgaagacaatacaa 24188194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 666 - 811
Target Start/End: Complemental strand, 27918071 - 27917925
Alignment:
Q  666 tggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctt-tttagtg 764  Q
    ||||||| ||||| ||  ||||| ||||||||| |||||||||||||||| ||||| ||||||||||  |||||||||||||||||| | || | ||||     
T  27918071 tggtttgaggaacgttgggtattgttttcatttgagtcgttgtaattcacttttatactaaatcatgcaactccataggtgttttgactattctatagta 27917972  T
Q  765 agaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaag 811  Q
    ||||||||||| ||||   ||| ||||||||||  || |||||||||    
T  27917971 agaaatcatgtcaatcgacaaatcaagacatcagatgaaggatcaag 27917925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 744 - 844
Target Start/End: Original strand, 1732656 - 1732756
Alignment:
Q  744 gtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttaga 843  Q
    ||||||||||||||||| || |||||||||||||||    ||||||||||||||| || ||||| ||| |||| || |||||||||||||| ||||||||    
T  1732656 gtgttttgagtctttttggtaagaaatcatgtaaattgacaaaacaagacatcacatgaaggattaagaatatgaagattgaagatcaatgattcttaga 1732755  T
Q  844 a 844  Q
    |    
T  1732756 a 1732756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 748 - 844
Target Start/End: Complemental strand, 14922044 - 14921948
Alignment:
Q  748 tttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaa 844  Q
    ||||||||||||| ||||||||||||||||||| | ||||||| |||||| ||| || ||| || |||| || ||||||| ||||||||||||||||    
T  14922044 tttgagtctttttcgtgagaaatcatgtaaatcggaaaaacaatacatcatgtgaagaatcgaggatatgaagattgaagttcaatggttcttagaa 14921948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 660 - 781
Target Start/End: Complemental strand, 28278517 - 28278395
Alignment:
Q  660 tctcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt 759  Q
    |||||||||||||  ||||||  ||||||||||||| || |||||||||||||||| ||||||||| ||||||  ||||||||| | |||| ||| ||||    
T  28278517 tctcaatggtttgaagaacatagtgtattattttcacttgagtcgttgtaattcacttttatcctagatcatgcaactccatagatattttaagtgtttt 28278418  T
Q  760 -tagtgagaaatcatgtaaatca 781  Q
     | || ||||| |||||||||||    
T  28278417 gtggtaagaaagcatgtaaatca 28278395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 682 - 864
Target Start/End: Original strand, 1733143 - 1733316
Alignment:
Q  682 ttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatca 781  Q
    ||||||| ||||||||| |||||||||||||||  ||||||||| | ||||| |||  ||||||||||||        ||||||| ||||||||||||||    
T  1733143 ttgtattgttttcatttgagtcgttgtaattcagttttatcctagagcatgaaactatataggtgttttg--------tagtgaggaatcatgtaaatca 1733234  T
Q  782 gtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
      ||| |||||||||||||| ||||| ||| ||   |  | ||||||||||  |||||||||| ||| |||||||||||||||    
T  1733235 tcaaagcaagacatcacgtgaaggattaaggat-gaagaaatgaagatcaagagttcttagaatgttgttgaagataatacaa 1733316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 5171763 - 5171657
Alignment:
Q  402 atttaagcttaacatttgtaacctaacagacagttttt---cattcaataatattttagagagttttcacaatttctgctggactctagaaccctatttt 498  Q
    |||||||||||||| |||||  |||| ||||| |||||   |||| |||||||||||||||||||||| ||||||||  |||| ||| ||||||||||||    
T  5171763 atttaagcttaacagttgtagtctaagagacaatttttattcattaaataatattttagagagttttctcaatttctagtggattcttgaaccctatttt 5171664  T
Q  499 cacaagt 505  Q
     ||||||    
T  5171663 tacaagt 5171657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 33051529 - 33051635
Alignment:
Q  402 atttaagcttaacatttgtaacctaacagacagttt---ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctatttt 498  Q
    |||||||||||||| |||||  |||| |||||  ||   ||||||||||||||||||||||||||||| ||||||||  |||| || |||||||||||||    
T  33051529 atttaagcttaacaattgtagtctaagagacaacttatattcattcaataatattttagagagttttctcaatttctagtggattccagaaccctatttt 33051628  T
Q  499 cacaagt 505  Q
    || ||||    
T  33051629 caaaagt 33051635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 23457596 - 23457663
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    ||||||||||||||||||||||||||||| |||||| || |||| ||  |||||||||||||||||||    
T  23457596 ttcattcaataatattttagagagttttctcaatttttggtggattccggaaccctattttcacaagt 23457663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 28737787 - 28737854
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| |||  ||| ||||||||||||||    
T  28737787 ttcattcaataatattttagagagttttctcaatttctgttggattctgaaactctattttcacaagt 28737854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 662 - 864
Target Start/End: Original strand, 35707826 - 35708028
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| | ||||| ||||||| |||||| || | | |||||||||||  ||||||||| ||     |||| |||||||||||||||| |||| |    
T  35707826 tcaatggtttgagaaacatgttgtattgttttcacttgatttgttgtaattcagttttatcctagattgcacgacttcataggtgttttgagtgttttgt 35707925  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    |||||| ||||||||||||||  ||| |||||||||| ||| || |||||| ||   |  |||||| ||||| | ||||||||| ||| ||||||| |||    
T  35707926 agtgaggaatcatgtaaatcataaaatcaagacatcatgtgaagtatcaaggat-gaagaattgaatatcaaggtttcttagaaggttgttgaagacaat 35708024  T
Q  861 acaa 864  Q
    ||||    
T  35708025 acaa 35708028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 668 - 811
Target Start/End: Complemental strand, 19949640 - 19949496
Alignment:
Q  668 gtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgag 766  Q
    ||||| ||||||| |||||||||||||| || ||||||||||||  |  |||||  || || |||| |||||||||||||||||||| |||| |||| ||    
T  19949640 gtttgaggaacatattgtattattttcacttgagtcgttgtaatatagttttattatagataatgaaactccataggtgttttgagtgttttgtagtaag 19949541  T
Q  767 aaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaag 811  Q
     ||||||||| || |  ||| ||| |||||| ||| |||||||||    
T  19949540 gaatcatgtagattatcaaatcaaaacatcatgtgaaggatcaag 19949496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 718 - 861
Target Start/End: Original strand, 25474116 - 25474259
Alignment:
Q  718 ttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatat 816  Q
    |||||||| ||||||  |||||| ||||||||||| | |||| ||||||| ||||||||||||||  ||| |||||||||| ||| || |||||| || |    
T  25474116 ttatcctagatcatgcaactccaaaggtgttttgactgttttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaagaatcaaggatgt 25474215  T
Q  817 caatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
     |  ||||||| |||| ||||||||||| ||| ||||||| ||||    
T  25474216 -agaattgaaggtcaagggttcttagaaggttgttgaagacaata 25474259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 664 - 779
Target Start/End: Original strand, 35031727 - 35031843
Alignment:
Q  664 aatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tag 762  Q
    ||||||||| ||||||| ||||||| |||||| |  ||||||||||| | || ||||||||| ||||||  | |||||||||||||||||| |||| |||    
T  35031727 aatggtttgaggaacatattgtattgttttcactcgagtcgttgtaacttacttttatcctagatcatgcaattccataggtgttttgagtgttttgtag 35031826  T
Q  763 tgagaaatcatgtaaat 779  Q
    | || |||||| |||||    
T  35031827 tcaggaatcatataaat 35031843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 663 - 750
Target Start/End: Complemental strand, 21843093 - 21843006
Alignment:
Q  663 caatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgtttt 750  Q
    |||||||||  ||||||| ||||||| ||||||||  |||| |||||||| || ||||||||||||||||  |||| |||||||||||    
T  21843093 caatggttttaggaacatgttgtattgttttcattcgagtcattgtaatttacttttatcctaaatcatgcaactctataggtgtttt 21843006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 662 - 764
Target Start/End: Complemental strand, 32276605 - 32276503
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    |||||||||||  |||||||||| ||| |||| |||  |||| |||||||| | |||||| |||||||||   ||||||| ||||||||||||| |||||    
T  32276605 tcaatggtttgaagaacattttgcattgtttttattcgagtcattgtaattgaagtttattctaaatcattcaactccatgggtgttttgagtcctttta 32276506  T
Q  762 gtg 764  Q
    |||    
T  32276505 gtg 32276503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 708 - 864
Target Start/End: Complemental strand, 16593796 - 16593640
Alignment:
Q  708 taattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggagga 806  Q
    |||||||  ||||||||| ||||||  |||||||||||||| ||||| |||| ||||||  ||||||||||||||  ||| ||||||||||  || ||||    
T  16593796 taattcagttttatcctagatcatgcaactccataggtgttctgagtgttttgtagtgaagaatcatgtaaatcatcaaatcaagacatcatttgaagga 16593697  T
Q  807 tcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||||  ||   |  | |||||||||| ||||||||||| ||| ||||||| |||||||    
T  16593696 tcaacgat-gaagaaatgaagatcaagggttcttagaaggttgttgaagacaatacaa 16593640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 590 - 646
Target Start/End: Complemental strand, 19548239 - 19548183
Alignment:
Q  590 aaaaccttaaaacattagatatatgaatcacctctattatatatccaacatttcctc 646  Q
    |||||||||| ||||||||||||||  || ||||| |||||||||||||||||||||    
T  19548239 aaaaccttaagacattagatatatgggtctcctctcttatatatccaacatttcctc 19548183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 680 - 798
Target Start/End: Complemental strand, 17240928 - 17240812
Alignment:
Q  680 ttttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaat 779  Q
    |||| |||| ||||||||  |||||| |||||| |  ||||| ||||||||||  ||| ||||||||||  |||| |||||||||| ||||||| |||||    
T  17240928 ttttctattgttttcattcgagtcgtcgtaatttagttttattctaaatcatgcaacttcataggtgtt--gagtgtttttagtgaaaaatcatataaat 17240831  T
Q  780 cagtaaaacaagacatcac 798  Q
      | |||||||||||||||    
T  17240830 tggcaaaacaagacatcac 17240812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 680 - 816
Target Start/End: Complemental strand, 22388827 - 22388695
Alignment:
Q  680 ttttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaat 779  Q
    |||| |||| ||||||||| |||| ||||||| ||  |||||||| |||||||  ||| |||     ||||||||||||| |||||||||||||||||||    
T  22388827 ttttttattgttttcatttgagtcattgtaatccagttttatcctgaatcatgcaacttcatt----ttttgagtcttttcagtgagaaatcatgtaaat 22388732  T
Q  780 cagtaaaacaagacatcacgtggaggatcaagtatat 816  Q
      | |||| | ||||| ||||| ||||||||| ||||    
T  22388731 tggcaaaatatgacattacgtgaaggatcaagaatat 22388695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 739 - 798
Target Start/End: Original strand, 28413918 - 28413977
Alignment:
Q  739 cataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcac 798  Q
    |||||||||| || ||| ||||||||| |||||||||||||||| ||| |||||||||||    
T  28413918 cataggtgttctgggtcattttagtgataaatcatgtaaatcagaaaatcaagacatcac 28413977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 32162106 - 32162041
Alignment:
Q  441 attcaataatattttagaga-gttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||||||||||||| |||||| || |||||| |||| ||  |||||||||||||||||||    
T  32162106 attcaataatattttagagaagttttctcagtttctggtggattcctgaaccctattttcacaagt 32162041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 4184878 - 4184946
Alignment:
Q  438 ttcattcaataatattttagagag-ttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||||||||||||||||| ||||| ||||||||  |||| ||   ||||||||||||||||||    
T  4184878 ttcattcaataatattttagagagtttttctcaatttctcgtggattccgaaaccctattttcacaagt 4184946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 502
Target Start/End: Original strand, 19582057 - 19582124
Alignment:
Q  435 tttttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcaca 502  Q
    ||||| |||||||||||||||||||||||||  ||||||||  || | || |||||||| ||||||||    
T  19582057 ttttttattcaataatattttagagagttttttcaatttctagtgaattcgagaacccttttttcaca 19582124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 963 - 1014
Target Start/End: Complemental strand, 21504117 - 21504066
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgt 1014  Q
    ||||||| |||||| |||||  |||||||||||||||||||||| |||||||    
T  21504117 tcctcctattgttcactctaaagtatgtttttctattattttataatgatgt 21504066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 737 - 775
Target Start/End: Complemental strand, 23255669 - 23255631
Alignment:
Q  737 tccataggtgttttgagtctttttagtgagaaatcatgt 775  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  23255669 tccataggtgttttgagtaattttagtgagaaatcatgt 23255631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 1218426 - 1218389
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttct 475  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  1218426 ttcattcaataatattttagagaattttctcaatttct 1218389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 962 - 1015
Target Start/End: Complemental strand, 15454042 - 15453989
Alignment:
Q  962 ctcctcctcttgttctctctatggtatgtttttctattattttatgatgatgtc 1015  Q
    ||||||||||||||||||||| | ||| ||||| |||||||| || ||||||||    
T  15454042 ctcctcctcttgttctctctaggttatatttttatattatttgataatgatgtc 15453989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 963 - 1004
Target Start/End: Complemental strand, 18235850 - 18235809
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattatttt 1004  Q
    ||||| |||| |||||||||||||||||||||||||| ||||    
T  18235850 tcctcttcttattctctctatggtatgtttttctattgtttt 18235809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 669 - 722
Target Start/End: Complemental strand, 29647630 - 29647577
Alignment:
Q  669 tttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatc 722  Q
    |||| ||||| |||| |||| ||||||||| |||||||||||||||| ||||||    
T  29647630 tttgaggaactttttatattgttttcatttgagtcgttgtaattcacttttatc 29647577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 6e-46; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 669 - 923
Target Start/End: Original strand, 26070504 - 26070758
Alignment:
Q  669 tttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaa 768  Q
    |||| |||| |||| ||||| ||||||||  |||   |||||||||  |||||| |||||||||  |||||||| |||||||||||||||||||||||||    
T  26070504 tttgaggaaaatttagtattgttttcattcgagttaatgtaattcagttttatcataaatcatgcaactccataagtgttttgagtctttttagtgagaa 26070603  T
Q  769 atcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcg 868  Q
    |||||||||||  | ||||||||||||||| || ||||||||| |||| || |||||||||| ||||||| || || ||||||||||| ||| |||||      
T  26070604 atcatgtaaattggcaaaacaagacatcacatgaaggatcaaggatatgaagattgaagatctatggttcgtataaggtttttgaagacaatgcaagtta 26070703  T
Q  869 ggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa 923  Q
    |  ||||||||  ||||||||||  ||||||||||| ||| ||| ||||||||||    
T  26070704 gagaaaattcagttcaagttccaaggcatttcaagacggaagaaggctcgaaaaa 26070758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 662 - 864
Target Start/End: Complemental strand, 7742961 - 7742759
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    |||||||||||  |||||||||||||| ||||| ||  |||| ||||||||||| ||||||||||||||||  |   |||| ||||||||||| ||||||    
T  7742961 tcaatggtttgaagaacattttgtattgttttcgttcgagtctttgtaattcacttttatcctaaatcatgtaaaatcatatgtgttttgagttttttta 7742862  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
     |||||||||||||||||||||||||||| |||||||||| || ||| |  |||| || | |||||||||||||||||||||| || |||||||| ||||    
T  7742861 atgagaaatcatgtaaatcagtaaaacaaaacatcacgtgaagaatcgaagatatgaagactgaagatcaatggttcttagaaggtctttgaagacaata 7742762  T
Q  862 caa 864  Q
    |||    
T  7742761 caa 7742759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 660 - 923
Target Start/End: Complemental strand, 19763984 - 19763716
Alignment:
Q  660 tctcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt 759  Q
    |||||| |||||||||||| ||||||||| ||||||||| || |  |||| ||||  ||||||||||||||||  ||| |||  ||||||||||||||||    
T  19763984 tctcaagggtttgtggaactttttgtattgttttcatttgaggcaatgtagttcagttttatcctaaatcatgcaacttcat--gtgttttgagtctttt 19763887  T
Q  760 tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtata-------tcaatattgaagatcaatggttcttagaaagtttttg 852  Q
    ||||||||||||||||||||| | ||||| |||||||| ||| || |||||| | |       | || |||||||||||| ||||||||||| |||||||    
T  19763886 tagtgagaaatcatgtaaatcggcaaaacgagacatcaagtgaagaatcaaggaaatgaagattgaagattgaagatcaagggttcttagaaggtttttg 19763787  T
Q  853 aagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa 923  Q
    ||||||||||||   |   ||||||||| ||||||||||  | |||  |||||||| ||||||||||||||    
T  19763786 aagataatacaaagtgaagaaaattcatttcaagttccaaaggattgaaagatggaagaacgctcgaaaaa 19763716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 662 - 888
Target Start/End: Original strand, 16634069 - 16634296
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttt- 760  Q
    ||||||||||| | ||||| ||||||| |||||| |  |||||||||||||||| ||||| ||||||||||  |||| ||||||||||||| | ||||      
T  16634069 tcaatggtttgagaaacatattgtattgttttcactcgagtcgttgtaattcacttttattctaaatcatgcaactctataggtgttttgaatgttttgc 16634168  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    ||||||||||||| ||||||   ||| |||||||||||||| |||| |||  |||| ||  ||||||| ||||||||||||||| ||||||||||| |||    
T  16634169 agtgagaaatcatataaatcgacaaatcaagacatcacgtgaaggaacaataatatgaagtttgaagaccaatggttcttagaaggtttttgaagaaaat 16634268  T
Q  861 acaagtcgggaaaaattcatctcaagtt 888  Q
    |||||  |  |||||||||| |||||||    
T  16634269 acaagatgaaaaaaattcatttcaagtt 16634296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 662 - 862
Target Start/End: Original strand, 20694663 - 20694863
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||| |||| ||   ||| |||| ||||||||||||||||||    
T  20694663 tcaatggtttgaggaactttttgtattgttttcattcgagtcattgtaattcagttttatcccaaattattcaactgcatatgtgttttgagtcttttta 20694762  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    || |||||||||||||||| | ||||||||||||||  || ||||| | | | || || ||||||||| |||||||||||||| || |||||||| ||||    
T  20694763 gtaagaaatcatgtaaatcggcaaaacaagacatcatatgaaggataacggacattaagattgaagataaatggttcttagaaggtatttgaagacaata 20694862  T
Q  862 c 862  Q
    |    
T  20694863 c 20694863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 662 - 841
Target Start/End: Complemental strand, 24411021 - 24410842
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| |||| |||||||||| ||||||||| |||||||||||||||  ||||||||||||| ||  |||    ||||||||||||| ||||||    
T  24411021 tcaatggtttgaggaaaattttgtattgttttcatttgagtcgttgtaattcagttttatcctaaatcgtgcaacttgcgaggtgttttgagtattttta 24410922  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttctta 841  Q
    |||||||||||||| |||  | |||| |||||||||| || |||||| || || | || ||| |||||||||||||||||    
T  24410921 gtgagaaatcatgtcaattggcaaaataagacatcacatgaaggatcgaggatctgaagattcaagatcaatggttctta 24410842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 662 - 856
Target Start/End: Original strand, 24841776 - 24841970
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| ||||||| ||||||| |||||| |  ||||||||||| |||| ||||||||| ||||||  |||||||||||||||| ||| |||| |    
T  24841776 tcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaagtcacttttatcctagatcatggaactccataggtgtttttagtgttttgt 24841875  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaaga 856  Q
    |||||||||||||||||||    ||| ||||||| |||||| ||||||||| ||||    ||||||| |||||||||||||||| | |||||||||    
T  24841876 agtgagaaatcatgtaaattgaaaaatcaagacaacacgtgaaggatcaaggatatgtggattgaag-tcaatggttcttagaaggattttgaaga 24841970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 676 - 865
Target Start/End: Complemental strand, 11274408 - 11274218
Alignment:
Q  676 aacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatg 774  Q
    ||||| ||||||| |||||| || || ||||| || |  | ||||||||||||||||  |||||||||||||||||||| |||| |||| ||||||||||    
T  11274408 aacatattgtattgttttcacttgagccgttgcaacttgcttttatcctaaatcatgcaactccataggtgttttgagtgttttgtagtaagaaatcatg 11274309  T
Q  775 taaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaag 865  Q
    || |||   ||| ||||||||||| || ||||||||| |||| || |||||||| ||||||||||||||| || |||||||| ||||||||    
T  11274308 tatatcgacaaatcaagacatcacatgaaggatcaaggatatgaagattgaagaccaatggttcttagaaggtctttgaagacaatacaag 11274218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 745 - 923
Target Start/End: Complemental strand, 17695464 - 17695293
Alignment:
Q  745 tgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaa 844  Q
    ||||||||||||||||||||| ||||||||||||  || ||||||||| |||||       ||||||  ||| |||| ||||||||||||||| ||||||    
T  17695464 tgttttgagtctttttagtgaaaaatcatgtaaagtagcaaaacaagaaatcac-------atcaaggttatgaataatgaagatcaatggttattagaa 17695372  T
Q  845 agtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa 923  Q
     ||||||||||| ||||||||| ||| ||||||||||  ||||||||  |||||||||||  || ||||||||||||||    
T  17695371 ggtttttgaagacaatacaagttggggaaaattcatcctaagttccaaggcatttcaagaccgaagaacgctcgaaaaa 17695293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 701 - 923
Target Start/End: Original strand, 18178162 - 18178385
Alignment:
Q  701 gtcgttgtaattcacgtttatcctaaatcat-gagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcag-taaaacaagacatcac 798  Q
    ||||||||||||||  ||||||||||||||| |  ||| ||||||| |||| ||||||||||||||||||||||||||||  |  ||||||||||| | |    
T  18178162 gtcgttgtaattcagttttatcctaaatcattgcaacttcataggtatttttagtctttttagtgagaaatcatgtaaattggaaaaaacaagacaccgc 18178261  T
Q  799 gtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatt 898  Q
     || |||||| || |||| || |||||||| |||| |||||| ||| || |||||||||||||||| | |   ||||||||||||||||||||  || ||    
T  18178262 atgaaggatcgaggatatgaagattgaagaccaattgttcttggaaggtctttgaagataatacaaattgaataaaattcatctcaagttccaaggc-tt 18178360  T
Q  899 tcaagatggatgaacgctcgaaaaa 923  Q
    |||||| ||| |||||||| |||||    
T  18178361 tcaagacggaagaacgctcaaaaaa 18178385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 682 - 862
Target Start/End: Original strand, 22229847 - 22230027
Alignment:
Q  682 ttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatc 780  Q
    ||||||| |||||| || |||||||||||||||  ||||||||| | ||||  |||||| | |||||||| || |||| ||||||| |||||||||||||    
T  22229847 ttgtattgttttcacttgagtcgttgtaattcagttttatcctagaccatgcaactccacaagtgttttgggtattttgtagtgaggaatcatgtaaatc 22229946  T
Q  781 agtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatac 862  Q
    |  ||| |||||||||||||| ||||||||  ||||  | |||||||||||| ||||||||||| ||| |||||||||||||    
T  22229947 aacaaatcaagacatcacgtgaaggatcaaagatatgga-attgaagatcaagggttcttagaaggttgttgaagataatac 22230027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 660 - 860
Target Start/End: Complemental strand, 25594786 - 25594585
Alignment:
Q  660 tctcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt 759  Q
    ||||||||||||| ||||||| ||||||| |||||| |  ||| |||||| ||||  |||||||||||| |||  ||| |||| ||||||||||| ||||    
T  25594786 tctcaatggtttgaggaacatattgtattgttttcactggagttgttgtatttcatttttatcctaaatgatgcaacttcatatgtgttttgagtgtttt 25594687  T
Q  760 -tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagata 858  Q
     |||||||||||||||||||||   |||  |||||||||| || | ||||||| |||| || |||||| |||||||| | |||||| ||||||| |||||    
T  25594686 atagtgagaaatcatgtaaatcgaaaaattaagacatcacatgaacgatcaaggatatgaagattgaatatcaatggatattagaaggtttttgtagata 25594587  T
Q  859 at 860  Q
    ||    
T  25594586 at 25594585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 662 - 864
Target Start/End: Original strand, 17027550 - 17027752
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    |||| |||||| ||||||| ||| ||| |||||| || |||||||||||||||| |||||||||||||| |  |||||||||||||||||| | ||||      
T  17027550 tcaagggtttgaggaacatattgaattgttttcacttgagtcgttgtaattcacttttatcctaaatcacgcaactccataggtgttttgactgttttgc 17027649  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
      ||||||||||||||||||   ||| |||||||||||||| | ||||||  |||| || ||||||| | |||| ||||||||| ||| ||||||| |||    
T  17027650 catgagaaatcatgtaaatcgaaaaatcaagacatcacgtgcaagatcaaagatatgaagattgaag-ttaatgcttcttagaaggttcttgaagacaat 17027748  T
Q  861 acaa 864  Q
    ||||    
T  17027749 acaa 17027752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 662 - 863
Target Start/End: Original strand, 20083488 - 20083691
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtc--tttt 759  Q
    ||||| ||||| |||||||||| |||| |||| |||  |||  ||||||||||  | ||||||||||||||  | |||||||||||||||||||  ||||    
T  20083488 tcaatagtttgaggaacattttttattgtttttattcgagtatttgtaattcagttctatcctaaatcatgcaattccataggtgttttgagtctttttt 20083587  T
Q  760 tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataa 859  Q
    |||||| |||| ||||||||| | ||||||| |||||||||| | ||| ||| |||| || | ||||| ||||||||| ||| ||||| |||||| | ||    
T  20083588 tagtgaaaaattatgtaaatcggcaaaacaaaacatcacgtgaaagattaaggatatgaaaaatgaagttcaatggtttttataaagtatttgaaaacaa 20083687  T
Q  860 taca 863  Q
    ||||    
T  20083688 taca 20083691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 662 - 890
Target Start/End: Original strand, 24517377 - 24517597
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||||| ||||||| ||||||    |||||||||||||||| |||||||| |||||||  |||||||||||||||||        ||    
T  24517377 tcaatggtttgaggaacatattgtattgttttcacccgagtcgttgtaattcacatttatccttaatcatgtaactccataggtgttttg--------ta 24517468  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
     | |||||||||||||||| ||||| ||| |||||||||| ||||||||| |||  || |||| ||| |||||||| | | || |||||| |||||||||    
T  24517469 ataagaaatcatgtaaatcggtaaatcaatacatcacgtgaaggatcaaggatacaaagattgcagaccaatggttatcataaggttttttaagataata 24517568  T
Q  862 caagtcgggaaaaattcatctcaagttcc 890  Q
     ||  ||   ||||||||| |||||||||    
T  24517569 gaaagcgaagaaaattcatttcaagttcc 24517597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 717 - 889
Target Start/End: Complemental strand, 11997931 - 11997757
Alignment:
Q  717 tttatcctaaatcatgagactccataggtgttttgagtcttttt-agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagt-at 814  Q
    ||||| ||||||||||  ||| |||||||||||||||| ||||| ||||||||| |||||||||| | | | |||||||||   |  |||||||||  ||    
T  11997931 tttatactaaatcatgcaacttcataggtgttttgagttttttttagtgagaaaacatgtaaatcggcagagcaagacatcttattaaggatcaagagat 11997832  T
Q  815 atcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttc 889  Q
    || || | |||||||||||| || |||||| |||||| |||||||||||||| || ||||||||||| |||||||    
T  11997831 atgaagaatgaagatcaatgatttttagaaggtttttaaagataatacaagttggaaaaaattcatcccaagttc 11997757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 665 - 797
Target Start/End: Complemental strand, 15697425 - 15697293
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtg 764  Q
    |||||| | ||||| ||||||||| ||||||||| || ||||| ||||||  ||||||| ||||||||   ||| |||||| ||||||||||||||| |     
T  15697425 atggttagaggaactttttgtattgttttcatttgagacgttgcaattcagttttatccgaaatcatgcatctctataggtattttgagtctttttatta 15697326  T
Q  765 agaaatcatgtaaatcagtaaaacaagacatca 797  Q
    ||||||||  |||||| ||||||||||||||||    
T  15697325 agaaatcagataaatccgtaaaacaagacatca 15697293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 700 - 780
Target Start/End: Original strand, 25367655 - 25367735
Alignment:
Q  700 agtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatc 780  Q
    |||||||| ||||||  |||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||    
T  25367655 agtcgttgaaattcagttttatcataaatcatgcaacttcataggtgttttgagtctttttagtgagaaatcatgtaaatc 25367735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 749 - 922
Target Start/End: Original strand, 25943702 - 25943875
Alignment:
Q  749 ttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtata-tcaatattgaagatcaatggttcttagaaagt 847  Q
    ||||||||||||||| |||||||||||||||||  |||| || |||||||||||| ||||||  ||| | || ||| || |||||||||||||||||  |    
T  25943702 ttgagtctttttagtaagaaatcatgtaaatca-caaaataatacatcacgtggaagatcaaagatattgaagattaaatatcaatggttcttagaattt 25943800  T
Q  848 ttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaa 922  Q
    ||||  |   |||||||||  | |||||||||||| ||||| || || ||||||||| ||| |||||||||||||    
T  25943801 tttttgaatcaatacaagttagtaaaaattcatctaaagtttcaatgtatttcaagacggaagaacgctcgaaaa 25943875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 704 - 864
Target Start/End: Complemental strand, 26330117 - 26329959
Alignment:
Q  704 gttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtgg 802  Q
    |||||||||| | ||||||||| ||||||  ||| |||||||||||||||| |||| ||||  ||||||||||||||    ||| ||||||||||| ||     
T  26330117 gttgtaattcccttttatcctagatcatgcaacttcataggtgttttgagtgttttgtagt--gaaatcatgtaaattgaaaaatcaagacatcacatga 26330020  T
Q  803 aggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||||||||| |||| || ||||||| |||||||| ||||||| |||||| |||| |||||||    
T  26330019 aggatcaaggatatgaagattgaag-tcaatggtccttagaaggttttttaagacaatacaa 26329959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 662 - 844
Target Start/End: Original strand, 19331534 - 19331715
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||| ||||| | ||| ||||||||| | ||||||  ||||||||||||| |  ||||||||||||||||  | |||||  |||||||||||||||||     
T  19331534 tcaattgtttgagaaactttttgtattgtgttcattcgagtcgttgtaatttagttttatcctaaatcatgcaattccat--gtgttttgagtctttttt 19331631  T
Q  762 gtgagaaatcatgtaaatcagt-aaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaa 844  Q
    |||||||||||||||||||  | |||||||  ||||| ||| |||||| || |||| || ||||||  |||||| || ||||||    
T  19331632 gtgagaaatcatgtaaatcgttaaaaacaaagcatcaagtgaaggatcgaggatatgaagattgaaattcaatgatttttagaa 19331715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 662 - 816
Target Start/End: Original strand, 18222516 - 18222671
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| | ||||| ||||||| |||| | |  |||| ||||||||||| ||||||||||||||||  | |||||||||||||||||| |||| |    
T  18222516 tcaatggtttgagaaacatattgtattgttttaactcgagtcattgtaattcacttttatcctaaatcatgcaaatccataggtgttttgagtgttttat 18222615  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatat 816  Q
    ||| || ||| ||||||||||  ||| |||| || |||||| | ||||||| ||||    
T  18222616 agtaagtaattatgtaaatcaacaaatcaaggcaacacgtgaaagatcaaggatat 18222671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 662 - 889
Target Start/End: Complemental strand, 16622759 - 16622541
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||||| ||||||| | |||| | || | |||||||| ||| ||||||||| ||||||  ||| |||||||||||||         |    
T  16622759 tcaatggtttgaggaacatgttgtattgtattcactctatttgttgtaatacacttttatcctagatcatgcaacttcataggtgttttgc--------a 16622668  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    ||||||||||||||||||    ||| ||||||||||| || ||||| ||| |||| || |||||||| || |||||||||| ||| ||||||||| ||||    
T  16622667 gtgagaaatcatgtaaattgacaaatcaagacatcacatgaaggattaaggatatgaagattgaagaccagtggttcttag-aaggttttgaagacaata 16622569  T
Q  862 caagtcgggaaaaattcatctcaagttc 889  Q
    ||| | |   ||||||||| ||||||||    
T  16622568 caaattgaagaaaattcatttcaagttc 16622541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 690 - 807
Target Start/End: Original strand, 30790827 - 30790944
Alignment:
Q  690 ttttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaaca 789  Q
    |||| |||| ||||||| |||||||  |||||||||||| ||   ||| ||| ||||||||||||||||||||||| |||| ||||||||| | || |||    
T  30790827 tttttatttgagtcgttataattcagttttatcctaaattatccaacttcattggtgttttgagtctttttagtgaaaaattatgtaaatcggcaacaca 30790926  T
Q  790 agacatcacgtggaggat 807  Q
    |||||||| ||| |||||    
T  30790927 agacatcatgtgaaggat 30790944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 662 - 843
Target Start/End: Complemental strand, 17382127 - 17381954
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||||| ||||||| |||||| |  | |||||||| ||||| ||||||||||||||||  |||  ||  ||||||||        ||    
T  17382127 tcaatggtttgaggaacatattgtattgttttcactcaaatcgttgtatttcacttttatcctaaatcatgcaactttatgagtgttttg--------ta 17382036  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttaga 843  Q
    |||||||||||||||||||   ||| |||||||| | ||| ||||||||| |||| ||  ||||||| ||||||||||||||    
T  17382035 gtgagaaatcatgtaaatcgtcaaatcaagacataatgtgaaggatcaaggatatgaagtttgaagaccaatggttcttaga 17381954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 662 - 750
Target Start/End: Complemental strand, 23157880 - 23157792
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgtttt 750  Q
    ||||||||||| ||||| ||| ||||| ||||||||| |||||||||||||||| |||||| |||||||||  | | ||||||||||||    
T  23157880 tcaatggtttgaggaacttttggtattgttttcatttgagtcgttgtaattcacttttatcataaatcatgcaaatgcataggtgtttt 23157792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 662 - 864
Target Start/End: Complemental strand, 12340106 - 12339904
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| ||||||| || ||||||||||| ||  ||| ||||||||||  ||||| ||| ||||||  ||| |||| || ||||| || |||| |    
T  12340106 tcaatggtttgaggaacatattatattattttcacttgtgtcattgtaattcagttttatactagatcatgcaacttcatatgtattttgcgtgttttgt 12340007  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    ||| || |||||| |||||||  ||| |||||||||||||| ||||||||| ||   |  |||||| ||||| ||||||||||| ||  ||||||| |||    
T  12340006 agtaaggaatcatataaatcaacaaatcaagacatcacgtgaaggatcaaggat-gaagaattgaaaatcaagggttcttagaaggtcgttgaagacaat 12339908  T
Q  861 acaa 864  Q
    ||||    
T  12339907 acaa 12339904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 828 - 942
Target Start/End: Original strand, 24130817 - 24130932
Alignment:
Q  828 atcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa-aga 926  Q
    |||||||| |||||||| ||||||||| | ||||||| | ||| |||||||||| |||||||||  |||||||||||   | ||||||| ||||||  ||    
T  24130817 atcaatggatcttagaaggtttttgaatacaatacaaattggggaaaattcatcccaagttccagggcatttcaagagcaaagaacgctagaaaaaggga 24130916  T
Q  927 cgaaaaatgcaaaatt 942  Q
    ||||||||||||||||    
T  24130917 cgaaaaatgcaaaatt 24130932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 662 - 751
Target Start/End: Original strand, 25680619 - 25680708
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttg 751  Q
    ||||||||||| ||||||| ||||||| |||||| |  |||||||||||||||  ||||| ||||||||||  ||| |||||||||||||    
T  25680619 tcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaattcaattttattctaaatcatgcaacttcataggtgttttg 25680708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 673 - 778
Target Start/End: Complemental strand, 29150986 - 29150882
Alignment:
Q  673 tggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatca 772  Q
    |||||||| |||||||||||||| || | || ||||||||||  |||||| |||||||||  | | |||| ||||||||||| ||||||||||||||||     
T  29150986 tggaacatcttgtattattttcacttgaatcattgtaattcatttttatcttaaatcatgcaatttcataagtgttttgagt-tttttagtgagaaatct 29150888  T
Q  773 tgtaaa 778  Q
    ||||||    
T  29150887 tgtaaa 29150882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 666 - 781
Target Start/End: Original strand, 15205670 - 15205786
Alignment:
Q  666 tggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtg 764  Q
    ||||||| ||||||| ||||||| |||||| |  |||||||||||||||  ||| ||||| ||||||  | |||||||||||||||||| ||||  ||||    
T  15205670 tggtttgaggaacatattgtattgttttcactcgagtcgttgtaattcagttttctcctagatcatgcaattccataggtgttttgagtgttttgcagtg 15205769  T
Q  765 agaaatcatgtaaatca 781  Q
    || ||| ||||||||||    
T  15205770 aggaataatgtaaatca 15205786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 438 - 502
Target Start/End: Original strand, 18252366 - 18252430
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcaca 502  Q
    ||||||||||||||||||| ||||||||| ||||||||  |||| | ||||||||||||||||||    
T  18252366 ttcattcaataatattttaaagagttttctcaatttctagtggattatagaaccctattttcaca 18252430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 737 - 811
Target Start/End: Complemental strand, 25075329 - 25075254
Alignment:
Q  737 tccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaag 811  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||  ||| |||||||||| ||| |||||||||    
T  25075329 tccataggtgttttgagtgttttgtagtaagaaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaag 25075254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 737 - 811
Target Start/End: Complemental strand, 25133298 - 25133223
Alignment:
Q  737 tccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaag 811  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||  ||| |||||||||| ||| |||||||||    
T  25133298 tccataggtgttttgagtgttttgtagtaagaaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaag 25133223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 742 - 864
Target Start/End: Original strand, 30072218 - 30072341
Alignment:
Q  742 aggtgttttgagt-ctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttctt 840  Q
    ||||||||||||| |||| ||||| |||||||| | ||||   ||| ||||||||||| || ||||||||  |||| || ||||||||| ||||||||||    
T  30072218 aggtgttttgagtgctttgtagtgggaaatcatattaatcgacaaatcaagacatcacatgaaggatcaaagatatgaagattgaagattaatggttctt 30072317  T
Q  841 agaaagtttttgaagataatacaa 864  Q
    | || |||||| |||| |||||||    
T  30072318 aaaaggtttttaaagacaatacaa 30072341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 738 - 864
Target Start/End: Complemental strand, 22643920 - 22643794
Alignment:
Q  738 ccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggtt 837  Q
    |||||||||| ||| ||||| |||||||||||||||| | ||| | ||||||||||| || |||||||||| ||  ||| || ||| || |||| |||||    
T  22643920 ccataggtgtcttgtgtcttgttagtgagaaatcatgcatatcggcaaaacaagacaccaagtggaggatcgagggtataaagattaaatatcagtggtt 22643821  T
Q  838 cttagaaagtttttgaagataatacaa 864  Q
    |||| || || |||||| | |||||||    
T  22643820 cttaaaaggtatttgaatacaatacaa 22643794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 443 - 505
Target Start/End: Original strand, 26140298 - 26140360
Alignment:
Q  443 tcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||||||||||||||||| |||||| || |||| ||| |||||||||||||| ||||    
T  26140298 tcaataatattttagagagttttctcaatttttggtggattcttgaaccctattttcataagt 26140360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 708 - 856
Target Start/End: Original strand, 22754963 - 22755112
Alignment:
Q  708 taattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta-gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggagga 806  Q
    |||||||  ||||||||| || |||  ||| |||||||||||||||| |||| | ||||||||||||||||||||  ||| |||||||| ||||  ||||    
T  22754963 taattcagttttatcctagattatgcaacttcataggtgttttgagtgttttgaagtgagaaatcatgtaaatcatcaaatcaagacataacgtacagga 22755062  T
Q  807 tcaagtatatcaat--attgaagatcaatggttcttagaaagtttttgaaga 856  Q
    ||||  | || |||  |||||||||||| |||||||| || ||| |||||||    
T  22755063 tcaa--agattaatgaattgaagatcaagggttcttataaggttgttgaaga 22755112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 741 - 798
Target Start/End: Complemental strand, 24279638 - 24279581
Alignment:
Q  741 taggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcac 798  Q
    ||||||||||||||| ||||||||||||||||| ||||||   |||||||||||||||    
T  24279638 taggtgttttgagtcattttagtgagaaatcatataaatcgacaaaacaagacatcac 24279581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 741 - 798
Target Start/End: Original strand, 24382576 - 24382633
Alignment:
Q  741 taggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcac 798  Q
    ||||||||||||||| ||||||||||||||||| ||||||   |||||||||||||||    
T  24382576 taggtgttttgagtcattttagtgagaaatcatataaatcgacaaaacaagacatcac 24382633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 700 - 776
Target Start/End: Complemental strand, 16603667 - 16603590
Alignment:
Q  700 agtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgta 776  Q
    ||||||||||||| |  |||| |||||||||||  | | |||||||||||||||| |||| |||||||||||||||||    
T  16603667 agtcgttgtaattaaattttagcctaaatcatgcaatttcataggtgttttgagtgttttctagtgagaaatcatgta 16603590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 751
Target Start/End: Complemental strand, 22967932 - 22967845
Alignment:
Q  664 aatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttg 751  Q
    ||||||||| ||||||| ||||| | ||||||||  ||||  |||||||||| | |||| ||||| |||| ||| |||||||||||||    
T  22967932 aatggtttgaggaacatattgtactgttttcattcaagtcaatgtaattcacttgtatcataaataatgaaacttcataggtgttttg 22967845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 963 - 1014
Target Start/End: Complemental strand, 25594192 - 25594141
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgt 1014  Q
    |||||||||||||||||||| | |||||||||||||| |||| | |||||||    
T  25594192 tcctcctcttgttctctctaagatatgtttttctattgttttgttatgatgt 25594141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 2e-45; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 662 - 923
Target Start/End: Original strand, 16439482 - 16439742
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||| ||||| || ||| |||||||| |||| |||  ||||||| ||||| || |||||||||||| |||  ||| || | ||||||||||||||||||    
T  16439482 tcaatagtttgagggacaatttgtattgtttttattg-agtcgttataattaacttttatcctaaataatgcaacttcacatgtgttttgagtcttttta 16439580  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    ||||||||||||||||||||| ||||||||||||||  || | ||||| | |||| || | |||||||||||||||||||||| | ||||||||| ||||    
T  16439581 gtgagaaatcatgtaaatcagaaaaacaagacatcagatgaaagatcagggatatgaagaatgaagatcaatggttcttagaatggttttgaagaaaata 16439680  T
Q  862 caagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa 923  Q
    |||||  || |||||||||| |||| ||||   ||||| |||| ||| ||||||||||||||    
T  16439681 caagttcgggaaaattcatcgcaagatccaagacattttaagacggaagaacgctcgaaaaa 16439742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 690 - 942
Target Start/End: Complemental strand, 26499910 - 26499658
Alignment:
Q  690 ttttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaaca 789  Q
    ||||||||  ||||||||||||||   ||||||||||||||||  | | |||||||||| ||||| ||||||||||||||||||| ||||| | ||||||    
T  26499910 ttttcattcaagtcgttgtaattcgattttatcctaaatcatgtaatttcataggtgttatgagtgtttttagtgagaaatcatgcaaatcggcaaaaca 26499811  T
Q  790 agacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatac-aagtcgggaaaaattcatctcaagtt 888  Q
    ||| | |||||| | |||| || |||| || |||||||||||||||||||||||| ||||||||||| ||||| ||||   | ||||||||| |||||||    
T  26499810 agataccacgtgaaagatcgaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaatacaaagtaaag-aaaattcatttcaagtt 26499712  T
Q  889 ccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaatgcaaaatt 942  Q
     ||  ||||| ||||| |||  |||||||||||||  ||||||| |||||||||    
T  26499711 tcaaggcattgcaagacggaacaacgctcgaaaaagaacgaaaactgcaaaatt 26499658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 704 - 904
Target Start/End: Complemental strand, 9943199 - 9942999
Alignment:
Q  704 gttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtgga 803  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||| ||| |||||| |||||||||||||||||| | |||||||||||| |  |  |    
T  9943199 gttgtaattcacttttatcctaaatcatgcaactccataggtgtttttagtatttttattgagaaatcatgtaaatcggaaaaacaagacattaaatcaa 9943100  T
Q  804 ggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaag 903  Q
    ||| |||| |||| || | |||| |||||||| ||||| || |||||| |||| |||  |||| ||| ||||||||||||||||||||   |||||||||    
T  9943099 ggaccaaggatatgaagaatgaaaatcaatggctcttataaggtttttaaagacaatgtaagttggggaaaattcatctcaagttccaagacatttcaag 9943000  T
Q  904 a 904  Q
    |    
T  9942999 a 9942999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 662 - 864
Target Start/End: Complemental strand, 17860540 - 17860338
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| |||||||||||||||||||||| |  |||| |||| ||| || |||||| |||||||||  |||||||| ||| ||||||| |||| |    
T  17860540 tcaatggtttgaggaacattttgtattattttcactcgagtcattgtcatttacttttatcttaaatcatgcaactccatacgtgctttgagtgttttgt 17860441  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    ||||||||||||||||| |||  ||| || ||||||||||| ||||| |||||||  || |||||||  ||||||||||||||| ||||||| ||| |||    
T  17860440 agtgagaaatcatgtaattcaacaaatcaggacatcacgtgaaggataaagtataagaa-attgaaggacaatggttcttagaaggtttttgtagacaat 17860342  T
Q  861 acaa 864  Q
    ||||    
T  17860341 acaa 17860338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 662 - 923
Target Start/End: Complemental strand, 26512869 - 26512609
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||||| ||||||||||||| ||||||||  | |||||||||||||| |||| |||| ||||||  || | |||| |||||||||||||  ||    
T  26512869 tcaatggtttgtgtaacattttgtattgttttcattcgattcgttgtaattcacttttaacctagatcatgcaacccgatagctgttttgagtcttccta 26512770  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    ||||||||||||||||| |  | |||||||| | || ||| || |||||| |||| ||   ||||||||||||||||||| || || | |||| | ||||    
T  26512769 gtgagaaatcatgtaaa-cgatgaaacaagaaaacatgtgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaata 26512671  T
Q  862 caagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa 923  Q
    ||||  |  |||||||||||||||||| ||  ||||||||||| |||  |||||||| ||||    
T  26512670 caagatgataaaaattcatctcaagtttcaaggcatttcaagaaggaaaaacgctcggaaaa 26512609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 662 - 923
Target Start/End: Complemental strand, 26517985 - 26517725
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||||| ||||||||||||| ||||||||  | |||||||||||||| |||| |||| ||||||  || | |||| |||||||||||||  ||    
T  26517985 tcaatggtttgtgtaacattttgtattgttttcattcgattcgttgtaattcacttttaacctagatcatgcaacccgatagctgttttgagtcttccta 26517886  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    ||||||||||||||||| |  | |||||||| | || ||| || |||||| |||| ||   ||||||||||||||||||| || || | |||| | ||||    
T  26517885 gtgagaaatcatgtaaa-cgatgaaacaagaaaacatgtgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaata 26517787  T
Q  862 caagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaa 923  Q
    ||||  |  |||||||||||||||||| ||  ||||||||||| |||  |||||||| ||||    
T  26517786 caagatgataaaaattcatctcaagtttcaaggcatttcaagaaggaaaaacgctcggaaaa 26517725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 674 - 840
Target Start/End: Complemental strand, 12972464 - 12972298
Alignment:
Q  674 ggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcat 773  Q
    |||| ||||||||||  |||||||  || ||||||||||||  | ||||||||||||||  ||| |||| ||||||||||||||||||| ||||||||||    
T  12972464 ggaaaattttgtattgctttcattcaagacgttgtaattcagttgtatcctaaatcatgcaacttcatacgtgttttgagtctttttagggagaaatcat 12972365  T
Q  774 gtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttctt 840  Q
    ||||||||| ||| |||||||| ||||| | |||| |  |||| || ||||||||||||||||||||    
T  12972364 gtaaatcagaaaaccaagacataacgtgaaagatcgatgatatgaagattgaagatcaatggttctt 12972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 707 - 864
Target Start/End: Complemental strand, 9396652 - 9396496
Alignment:
Q  707 gtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggagga 806  Q
    ||||||||  ||||| ||||||||||  ||| |||| |||||||||||||||||||||||||||||| |||||| | |||||||||||||||||| ||||    
T  9396652 gtaattcatctttattctaaatcatgcaacttcatatgtgttttgagtctttttagtgagaaatcat-taaatcggcaaaacaagacatcacgtgaagga 9396554  T
Q  807 tcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||||| | |  || | |||||||||| | |||||||||| |||||||||| |||||||    
T  9396553 tcaaggacaagaagaatgaagatcaacgattcttagaaattttttgaagacaatacaa 9396496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 662 - 811
Target Start/End: Complemental strand, 32930564 - 32930415
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| |||||||||||| || ||| |||   ||||||| |||||||| |||||||| || ||||  | |  |||| |||||||||||||||||    
T  32930564 tcaatggtttgcggaacattttgttttgtttccataagagtcgttttaattcacttttatccttaaacatgcaatttgatagatgttttgagtcttttta 32930465  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaag 811  Q
    ||||||||||||||||||  | ||||||||||||||| ||||||||||||    
T  32930464 gtgagaaatcatgtaaattggcaaaacaagacatcacatggaggatcaag 32930415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 700 - 816
Target Start/End: Original strand, 24617572 - 24617688
Alignment:
Q  700 agtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacg 799  Q
    |||||| ||||||||  ||||||||||||||||  ||| |||  ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |    
T  24617572 agtcgtcgtaattcagttttatcctaaatcatgtaacttcatgagtgttttgagtctttttagtgagaaattatgtaaatcagcaaaacaagacatcatg 24617671  T
Q  800 tggaggatcaagtatat 816  Q
    || ||| ||||| ||||    
T  24617672 tgaagggtcaaggatat 24617688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 662 - 865
Target Start/End: Complemental strand, 14924509 - 14924306
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| |||||| ||| |||  | ||||||  ||||||||||  |||| ||||| ||||||||||  | |  ||||| |||||||||||||| |    
T  14924509 tcaatggtttgaggaacaatttatatcttattcattcgagtcgttgtacctcacttttattctaaatcatgcaattatataggggttttgagtcttttaa 14924410  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    ||||||||||||||||| |||  |||||||||||||  || || | ||   |||| || |||||||||||||||||| | ||| ||||||||||| ||||    
T  14924409 gtgagaaatcatgtaaaccagctaaacaagacatcaaatgaagaaccagagatatgaaaattgaagatcaatggttcatggaatgtttttgaagacaata 14924310  T
Q  862 caag 865  Q
    ||||    
T  14924309 caag 14924306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 757 - 864
Target Start/End: Complemental strand, 33638501 - 33638394
Alignment:
Q  757 ttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaaga 856  Q
    |||||||||||||||||||||||| | ||||||| | |||| ||| ||||||||| |||| || ||||||||||||||||||||| || || ||||||||    
T  33638501 ttttagtgagaaatcatgtaaatcggcaaaacaatatatcaagtgaaggatcaaggatatgaagattgaagatcaatggttcttataaggtctttgaaga 33638402  T
Q  857 taatacaa 864  Q
    ||||||||    
T  33638401 taatacaa 33638394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 735 - 798
Target Start/End: Original strand, 15178102 - 15178165
Alignment:
Q  735 actccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcac 798  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||| |||||||||||    
T  15178102 actccataggtgttttgagtaattttagtgagaaatcatgtgaatcagtaaatcaagacatcac 15178165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 723 - 864
Target Start/End: Complemental strand, 24507473 - 24507332
Alignment:
Q  723 ctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaata 821  Q
    ||||||||||  |||||||||||||||||||  |||| |||||||||||| |||||||||  ||| |||||||||||||| |||||  |  |||| || |    
T  24507473 ctaaatcatgcaactccataggtgttttgagagttttgtagtgagaaatcctgtaaatcaacaaatcaagacatcacgtgaaggattgacgatatgaaga 24507374  T
Q  822 ttgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||||||| |||||||| ||||||  ||| |||||| |||||||    
T  24507373 ttgaaga-caatggttgttagaagttttatgaagaaaatacaa 24507332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 668 - 864
Target Start/End: Original strand, 15574953 - 15575149
Alignment:
Q  668 gtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgag 766  Q
    ||||| ||||||| || |||| |||||| | |||||||||||||| |  |||| |||| ||||||  ||||||||||| |||| ||| |||| ||| |||    
T  15574953 gtttgaggaacatgttatattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccataggttttttaagtgttttgtagcgag 15575052  T
Q  767 aaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
     |||||||||||| |  ||| |||||||||||||| ||||||||  ||   |  |||||||||||| ||||||||||| ||  ||||||| |||||||    
T  15575053 gaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaacgat-gaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaa 15575149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 665 - 760
Target Start/End: Complemental strand, 1755650 - 1755555
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttt 760  Q
    |||||||| ||| ||||||||||| ||||||||| | |||||||||||||| | |||||  |||||||  ||| |||| |||||||||||||||||    
T  1755650 atggtttgaggatcattttgtattgttttcatttgattcgttgtaattcacttgtatccctaatcatgtaactacatacgtgttttgagtcttttt 1755555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 666 - 798
Target Start/End: Complemental strand, 14768356 - 14768224
Alignment:
Q  666 tggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtga 765  Q
    ||||||| ||||  |||||||||  |||||||  |||  ||||||||||| ||||| ||||| ||||  | | ||||  ||||||||||||||| ||  |    
T  14768356 tggtttgaggaattttttgtattggtttcattcgagttattgtaattcacatttattctaaaacatgcaatttcataaatgttttgagtcttttcagata 14768257  T
Q  766 gaaatcatgtaaatcagtaaaacaagacatcac 798  Q
    ||||||||||||||| | |||||||||||||||    
T  14768256 gaaatcatgtaaatcggcaaaacaagacatcac 14768224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 662 - 758
Target Start/End: Complemental strand, 20495885 - 20495790
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttt 758  Q
    ||||||||||| ||||||||||| ||| |||| |||| |||||||||||||||  |||||| ||||| |||  ||| |||| |||||||||||||||    
T  20495885 tcaatggtttgaggaacattttg-attgtttttatttgagtcgttgtaattcaattttatcttaaattatgcaacttcataagtgttttgagtcttt 20495790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 735 - 798
Target Start/End: Original strand, 15165788 - 15165851
Alignment:
Q  735 actccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcac 798  Q
    |||||||| |||||||||||  ||||||||||||||||||| |||| ||||| |||||||||||    
T  15165788 actccatacgtgttttgagtaattttagtgagaaatcatgtgaatcggtaaatcaagacatcac 15165851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 963 - 1010
Target Start/End: Complemental strand, 30235907 - 30235860
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatg 1010  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||    
T  30235907 tcctcctcttgttctctctagggtatgtttttctattgttttatgatg 30235860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 404 - 498
Target Start/End: Complemental strand, 34373962 - 34373865
Alignment:
Q  404 ttaagcttaacatttgtaacctaacagacagttttt---cattcaataatattttagagagttttcacaatttctgctggactctagaaccctatttt 498  Q
    |||||||||||| ||||| ||||| || ||| ||||   ||||||||||||||||||||||||||| ||||||||| |||| || | |||| ||||||    
T  34373962 ttaagcttaacagttgtagcctaagaggcagcttttgatcattcaataatattttagagagttttctcaatttctggtggattccataaccatatttt 34373865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 12882072 - 12882140
Alignment:
Q  438 ttcattcaataatattttagagag-ttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||||||||||||||||| ||||| ||||||||| |||| ||   ||||||||||||||||||    
T  12882072 ttcattcaataatattttagagagtttttctcaatttctggtggattccgaaaccctattttcacaagt 12882140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 964 - 1014
Target Start/End: Complemental strand, 16174890 - 16174840
Alignment:
Q  964 cctcctcttgttctctctatggtatgtttttctattattttatgatgatgt 1014  Q
    |||| |||||||||||||| ||||| ||||||||||||||||| |||||||    
T  16174890 cctcttcttgttctctctacggtatatttttctattattttataatgatgt 16174840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 725 - 851
Target Start/End: Complemental strand, 22559241 - 22559116
Alignment:
Q  725 aaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattg 824  Q
    ||||||||  ||| ||||||||||||| ||||||| ||||||||||||||||||||   |||||||| | | || || | ||||||| |||| ||||       
T  22559241 aaatcatgcaacttcataggtgttttgggtctttt-agtgagaaatcatgtaaatcgaaaaaacaaggcctaacatgaatgatcaaggatatgaataaaa 22559143  T
Q  825 aagatcaatggttcttagaaagttttt 851  Q
    ||| ||||||||| |||||| ||||||    
T  22559142 aagttcaatggttgttagaaggttttt 22559116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 662 - 861
Target Start/End: Original strand, 30355349 - 30355539
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    |||||||||||   ||||| ||||||| |||||| |  ||||||| |||||||| |||||| |||||||||  |||  ||||||||||||        ||    
T  30355349 tcaatggtttgataaacatattgtatt-ttttcactcaagtcgttttaattcacttttatcataaatcatgcaactttataggtgttttg--------ta 30355439  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    || || | ||| |||||||   ||| |||||| |||| || |||||| || |||| || ||||||||||||| |||||||||| ||||||||||| ||||    
T  30355440 gtaaggattcacgtaaatcgacaaaccaagacctcacatgaaggatcgaggatatgaagattgaagatcaatcgttcttagaaggtttttgaagacaata 30355539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 963 - 1015
Target Start/End: Original strand, 16528227 - 16528279
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgtc 1015  Q
    |||||||||||||||||||| ||||||||||| |||| |||| | ||||||||    
T  16528227 tcctcctcttgttctctctagggtatgtttttgtattgttttgttatgatgtc 16528279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 811
Target Start/End: Original strand, 15998537 - 15998684
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagt 763  Q
    |||||||| |||| || ||||||| |||||  || | |||||| |||| |  ||| || || ||||||  ||| |||||||||||||||| |||| ||||    
T  15998537 atggtttgaggaaaatattgtattcttttcccttgattcgttgaaattaagttttctcatatatcatgcaacttcataggtgttttgagtgttttgtagt 15998636  T
Q  764 gagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaag 811  Q
    ||| |||||||||||| |  ||| |||||||||| ||| | |||||||    
T  15998637 gaggaatcatgtaaatgaccaaatcaagacatcatgtgaatgatcaag 15998684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 779
Target Start/End: Complemental strand, 17198845 - 17198737
Alignment:
Q  664 aatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgtttt-gagtctttttag 762  Q
    ||||||||| ||||| ||||||||| ||||||| | ||| |||||||||||  |||||        |||  |||| ||||||||||| ||||||||||||    
T  17198845 aatggtttgaggaactttttgtattgttttcatctgagttgttgtaattcagttttat--------atgcaactctataggtgtttttgagtctttttag 17198754  T
Q  763 tgagaaatcatgtaaat 779  Q
    ||||||||| |||||||    
T  17198753 tgagaaatcttgtaaat 17198737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 821 - 864
Target Start/End: Original strand, 33638268 - 33638311
Alignment:
Q  821 attgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||||||||||||||||||||| || || ||||||||||||||||    
T  33638268 attgaagatcaatggttcttataaggtctttgaagataatacaa 33638311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 584 - 642
Target Start/End: Complemental strand, 15092160 - 15092102
Alignment:
Q  584 ttacctaaaaccttaaaacattagatatatgaatcacctctattatatatccaacattt 642  Q
    ||||||||||||||||| ||| || |||||| ||| |||||  ||||||||||||||||    
T  15092160 ttacctaaaaccttaaagcatcaggtatatggatcccctctcgtatatatccaacattt 15092102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 678 - 779
Target Start/End: Complemental strand, 26518608 - 26518507
Alignment:
Q  678 cattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaa 777  Q
    ||||||||||  ||||||||  |||||||||||||||| ||||||    ||||||  |||  |||||| |||||| |||| ||| | |||||||||||||    
T  26518608 cattttgtatagttttcattcgagtcgttgtaattcacctttatcaaggatcatgcaacttgataggtattttgaatcttcttaataagaaatcatgtaa 26518509  T
Q  778 at 779  Q
    ||    
T  26518508 at 26518507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 823 - 904
Target Start/End: Complemental strand, 32930375 - 32930295
Alignment:
Q  823 tgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaaga 904  Q
    |||| ||||||| ||||| ||| |||||| |||| ||||||||| ||||||| || ||| |||||||||  |||||||||||    
T  32930375 tgaaaatcaatgattcttggaaggtttttaaagacaatacaagttgggaaaa-ttaatcacaagttccaaggcatttcaaga 32930295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 4e-44; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 674 - 933
Target Start/End: Complemental strand, 23908350 - 23908091
Alignment:
Q  674 ggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcat 773  Q
    ||||||||||||||| ||||||||  | |||||||||||| | ||||||| |||| |||  | | |||||||| ||||||||||| ||| ||||||||||    
T  23908350 ggaacattttgtattgttttcattcgattcgttgtaattcccttttatccaaaataatgcaatttcataggtgctttgagtctttctagggagaaatcat 23908251  T
Q  774 gtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaa 873  Q
    ||||| | | ||| ||||||||| | || ||||||||| |||| || ||| ||||||||||||| |||||||||||||||||| ||||||| | ||| ||    
T  23908250 gtaaagcggcaaagcaagacatctcatgaaggatcaagaatatgaagatttaagatcaatggtttttagaaagtttttgaagacaatacaaattggggaa 23908151  T
Q  874 aattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaa 933  Q
    |||||||  ||| |||||  | ||||||| | ||| ||||||| |||||| |||||||||    
T  23908150 aattcattccaaattccaaggaatttcaaaaaggaagaacgcttgaaaaatgacgaaaaa 23908091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 662 - 840
Target Start/End: Complemental strand, 26387936 - 26387758
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| | ||| ||||||||| |||||||||  ||||| |||||| |  ||||||||||||||||  ||||||||| |||||||||||||||||    
T  26387936 tcaatggtttgagaaacgttttgtattcttttcatttgtgtcgtagtaattaagttttatcctaaatcatgcaactccatagatgttttgagtcttttta 26387837  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttctt 840  Q
     ||||||||||||||||||||  ||||||||||||| ||| ||||||||  |||| |||||||||||| ||||||||||    
T  26387836 atgagaaatcatgtaaatcagctaaacaagacatcaagtgaaggatcaaagatatgaatattgaagattaatggttctt 26387758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 662 - 866
Target Start/End: Complemental strand, 21829224 - 21829020
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||   ||| |||| | |||||| ||||| |||    
T  21829224 tcaatggtttgaggaacattttgtattattttcatttgagtcgttgtaattcagttttatcctaaatcatacaacttcatatgagttttgggtcttgtta 21829125  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    |||||||||| ||||||||    |||||||||||||| || || |||||| |||| || |||||||||||||||||| | ||| || |||||||| ||||    
T  21829124 gtgagaaatcttgtaaatcgtcgaaacaagacatcacatgaagtatcaaggatatgaagattgaagatcaatggttcatcgaaggtctttgaagacaata 21829025  T
Q  862 caagt 866  Q
     ||||    
T  21829024 taagt 21829020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 662 - 864
Target Start/End: Original strand, 11474869 - 11475072
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtc-ttttt 760  Q
    ||||||||||| ||||| ||||||||||||||||||  | |||||||||||||  ||||||||||||||||  ||| |||| |||||||||||| |||||    
T  11474869 tcaatggtttgaggaactttttgtattattttcattcgactcgttgtaattcaattttatcctaaatcatgcaacttcatatgtgttttgagtctttttt 11474968  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    |||||||||||||||||||| | ||||||||||||||| || |||||| |  |||| |  ||| ||||| ||||||||||||||  | |||||||| |||    
T  11474969 agtgagaaatcatgtaaatcggcaaaacaagacatcacatgaaggatcgaagatatgaggattcaagataaatggttcttagaagatatttgaagacaat 11475068  T
Q  861 acaa 864  Q
    ||||    
T  11475069 acaa 11475072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 662 - 864
Target Start/End: Complemental strand, 19219303 - 19219100
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| ||| ||| || ||||| ||||| |  |||||||||||||||| ||||||| ||||||||  || |||||  |||||||||| |||| |    
T  19219303 tcaatggtttgaggagcatattttattactttcactagagtcgttgtaattcacttttatccaaaatcatgcaacaccataaatgttttgagtgttttgt 19219204  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    |||||| |||||||||||||   ||| ||||||||||| || ||||||||| |||| || |||||||||||||||||||||||| ||||||||||| |||    
T  19219203 agtgaggaatcatgtaaatcttcaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaat 19219104  T
Q  861 acaa 864  Q
    ||||    
T  19219103 acaa 19219100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 662 - 846
Target Start/End: Complemental strand, 8402642 - 8402459
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| |||||| |||||||| ||||||||  |||||||||||||||  |||||| |||||||||  ||||||||||||||||||||| |||||    
T  8402642 tcaatggtttgaggaacaatttgtattgttttcattcgagtcgttgtaattcatttttatcttaaatcatgcaactccataggtgttttgagtc-tttta 8402544  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaag 846  Q
    | ||| |||| ||||||||  || | |||||||||| ||| |||||| || |||| || |||||||| | ||||||||| |||||    
T  8402543 gcgaggaatcgtgtaaatcgatagatcaagacatcaagtgaaggatcgaggatatgaagattgaagaactatggttcttcgaaag 8402459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 705 - 904
Target Start/End: Original strand, 18474236 - 18474435
Alignment:
Q  705 ttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggag 804  Q
    |||||||||||  |||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| | || ||||||||| || || ||    
T  18474236 ttgtaattcactgttatcctaaatcatgcaactccataggtgttttgagtcttttcagtgagaaatcatgtaaatcgggaacacaagacattacatgaag 18474335  T
Q  805 gatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaaga 904  Q
    |||| |  || | || ||||||  |||||||| ||||||| || |||||||| |||||||   |   ||||||||| |||||||||| |||||| |||||    
T  18474336 gatcgaagatgtaaagattgaatttcaatggtacttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaagttccaatgcattgcaaga 18474435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 748 - 913
Target Start/End: Original strand, 26418829 - 26418994
Alignment:
Q  748 tttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagt 847  Q
    ||||| ||||||||||||||||||||||||||| | |||| |||||||| | || ||||||||| |||| || ||| |||||  ||||||||||||| ||    
T  26418829 tttgaatctttttagtgagaaatcatgtaaatcggaaaaataagacatcgcatgaaggatcaaggatatgaagattaaagattgatggttcttagaaggt 26418928  T
Q  848 ttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaac 913  Q
    |||| |||| ||||||| | ||| |||||||||| || ||| ||  ||||||||||||||| ||||    
T  26418929 ttttaaagaaaatacaaattggggaaaattcatcccatgttgcaaggcatttcaagatggaagaac 26418994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 679 - 863
Target Start/End: Original strand, 19285139 - 19285322
Alignment:
Q  679 attttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaa 778  Q
    |||||||||||||||||||  |||||||||||||||  ||| |||||||||  |  ||||| ||||||||| |||||| ||| |||||| ||| ||||||    
T  19285139 attttgtattattttcattcgagtcgttgtaattcaattttgtcctaaatccagcaactccttaggtgtttcgagtctctttcgtgagatatcgtgtaaa 19285238  T
Q  779 tcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataataca 863  Q
    |||| ||||||||| ||||  || |||||| || ||||||| |||||  ||||||||||||| ||| || |||||||| ||||||    
T  19285239 tcagaaaaacaagatatcaaatgtaggatcgag-atatcaagattgataatcaatggttcttggaaggtatttgaagacaataca 19285322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 664 - 826
Target Start/End: Original strand, 26297774 - 26297934
Alignment:
Q  664 aatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagt 763  Q
    ||||||||| | ||| |||| |||| ||||||||  |||||||||||||||  ||||||||||||||||  ||| |||| |||||  |||||| ||||||    
T  26297774 aatggtttgagaaactttttatattgttttcattcgagtcgttgtaattcaattttatcctaaatcatgcaacttcatatgtgtt--gagtctatttagt 26297871  T
Q  764 gagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaa 826  Q
    || |||||||||||||| | |||||||||||||| ||| |||||| || |||| || ||||||    
T  26297872 gataaatcatgtaaatcggcaaaacaagacatcaagtgaaggatcgaggatatgaagattgaa 26297934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 682 - 890
Target Start/End: Original strand, 10341838 - 10342038
Alignment:
Q  682 ttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatca 781  Q
    ||||||| |||||| |  |||||||||||||||| ||||| | ||||||||  |||||||||||||||||        | ||||||||||||||||||||    
T  10341838 ttgtattgttttcactaaagtcgttgtaattcacttttattcaaaatcatgcaactccataggtgttttg--------ttgtgagaaatcatgtaaatca 10341929  T
Q  782 gtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatc 881  Q
      ||| | | |||||| ||| ||||| ||| |||  || ||||||||||| |||||||||||| ||||||||||| |||||||   | |||||| ||||     
T  10341930 acaaatccaaacatcaagtgaaggattaaggatagaaagattgaagatcagtggttcttagaaggtttttgaagacaatacaaagtgagaaaaactcatt 10342029  T
Q  882 tcaagttcc 890  Q
    |||||||||    
T  10342030 tcaagttcc 10342038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 669 - 864
Target Start/End: Original strand, 21017907 - 21018102
Alignment:
Q  669 tttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgaga 767  Q
    |||| ||||||| || |||||||||||    |||||||||||||||  ||||||||| ||||||  |||| | | ||||||||||| |||| || |||||    
T  21017907 tttgaggaacatattatattattttcaaccgagtcgttgtaattcagttttatcctagatcatgcaactctaaatgtgttttgagtgttttgtattgaga 21018006  T
Q  768 aatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    |||||||||| |||  ||| |||||||| ||||| ||||||||  |||| || |||||||| ||||||||  || ||  ||||||||||||||||||    
T  21018007 aatcatgtaattcaacaaatcaagacattacgtgaaggatcaatgatatgaa-attgaagaccaatggtttctataacttttttgaagataatacaa 21018102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 662 - 915
Target Start/End: Original strand, 33577757 - 33578004
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    |||||||||||  |||| ||||||||| |||| |||| | || ||||||||||  | ||||||||||||||  ||  ||| |||| ||||||||||||||    
T  33577757 tcaatggtttgaagaacgttttgtattgtttttatttgattcattgtaattcatttatatcctaaatcatgcaacctcattggtggtttgagtcttttta 33577856  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaa-gtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
      || ||| |||||||||| | |||  |||||||||| || |||||||| |||||| || | ||||||| |||| |||        |||||||||| |||    
T  33577857 aagaaaaaacatgtaaatcggcaaagtaagacatcacatgaaggatcaaggtatatgaagaatgaagataaatgattc-------atttttgaagacaat 33577949  T
Q  861 acaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgc 915  Q
    ||| || |||||||| |||||||||||| ||   |||||||||||||| ||||||    
T  33577950 acatgttgggaaaaaatcatctcaagtttcaagacatttcaagatggaagaacgc 33578004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 688 - 811
Target Start/End: Complemental strand, 26797313 - 26797191
Alignment:
Q  688 tattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaa 787  Q
    ||||||||||  ||||||| ||||||   ||||||||||||||||  ||| ||||||||||| |||||||||||| |||| ||||||||||||   ||||    
T  26797313 tattttcattcgagtcgttataattctgttttatcctaaatcatgcaacttcataggtgttt-gagtctttttagagagatatcatgtaaatcgacaaaa 26797215  T
Q  788 caagacatcacgtggaggatcaag 811  Q
    |||||||||| ||| |||||||||    
T  26797214 caagacatcaagtgaaggatcaag 26797191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 680 - 789
Target Start/End: Complemental strand, 30493338 - 30493228
Alignment:
Q  680 ttttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgag-aaatcatgtaaa 778  Q
    ||||||||| ||||||||  |||||||||| || |  ||||||||||||||||  | ||||| |||||||||||||||||||||||| ||||||||||||    
T  30493338 ttttgtattgttttcattcgagtcgttgtagtttagttttatcctaaatcatgcaaatccatgggtgttttgagtctttttagtgagaaaatcatgtaaa 30493239  T
Q  779 tcagtaaaaca 789  Q
    | || ||||||    
T  30493238 taagcaaaaca 30493228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 662 - 810
Target Start/End: Original strand, 11521163 - 11521311
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| ||||||| |||||||||||| | || | | | |||||||||  ||||||||| ||||||  | ||||||| |||||||||| |||| |    
T  11521163 tcaatggtttgaggaacatattgtattatttttacttgatttg-tgtaattcagttttatcctagatcatgcaagtccatagttgttttgagtgttttgt 11521261  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaa 810  Q
    |||||| ||||||||||||||  ||| ||| |||| ||||||||||||||    
T  11521262 agtgaggaatcatgtaaatcaacaaatcaaaacattacgtggaggatcaa 11521311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 662 - 781
Target Start/End: Original strand, 13911288 - 13911408
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| ||||||| | ||||| |||||| || | || ||||||||||| ||||||||| ||||||  ||| |||| ||||||| ||| |||| |    
T  13911288 tcaatggtttgaggaacatatggtattgttttcacttgaatcattgtaattcacttttatcctagatcatgcaacttcatatgtgtttttagtgttttgt 13911387  T
Q  761 agtgagaaatcatgtaaatca 781  Q
    |||||||||||||||||||||    
T  13911388 agtgagaaatcatgtaaatca 13911408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 662 - 864
Target Start/End: Complemental strand, 1475372 - 1475169
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgt-tttgagtcttt-t 759  Q
    ||||||||||| |||| || |||||||||||||| |  |||||||||||||||  | ||||||| ||||||  ||||||| ||| | ||||||| |||      
T  1475372 tcaatggtttgaggaatatattgtattattttcactcgagtcgttgtaattcaattatatcctagatcatgcaactccatgggtatatttgagtgtttcg 1475273  T
Q  760 tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaata-ttgaagatcaatggttcttagaaagtttttgaagata 858  Q
    ||||||  ||| ||||||||||  ||| |||||||||| ||| |||||||||   || || | |||||||||||  |||||||||| ||| |||||||||    
T  1475272 tagtgaagaataatgtaaatcatcaaatcaagacatcatgtgaaggatcaag--gatgaagagttgaagatcaagagttcttagaaggttattgaagata 1475175  T
Q  859 atacaa 864  Q
    ||||||    
T  1475174 atacaa 1475169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 680 - 891
Target Start/End: Complemental strand, 5632607 - 5632405
Alignment:
Q  680 ttttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaat 779  Q
    |||||| || ||||||||| | |||||||||||||| |||||| | |||||||  |||||||||||||||||        ||||||||||||||||||||    
T  5632607 ttttgtgttgttttcatttgattcgttgtaattcacttttatcttgaatcatgcaactccataggtgttttg--------tagtgagaaatcatgtaaat 5632516  T
Q  780 cagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattca 879  Q
    |   ||| ||||||||||| ||||| ||  |  |||| || |||||||| ||| |||||||| || || ||||||||||||| || | |   ||||||||    
T  5632515 cgacaaaccaagacatcacatggagaattgataatataaagattgaaga-caacggttcttataaggtatttgaagataataaaaattgaagaaaattca 5632417  T
Q  880 tctcaagttcca 891  Q
    | ||||||||||    
T  5632416 tttcaagttcca 5632405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 739 - 926
Target Start/End: Original strand, 21813586 - 21813775
Alignment:
Q  739 cataggtgttttgagtcttttt-agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagt-atatcaatattgaagatcaatggt 836  Q
    ||||||| |||||||||||||| | ||| ||| ||||||| |||| ||||||||||| || || |||||| |||  |||| || | ||| |||||| | |    
T  21813586 cataggtattttgagtcttttttattgataaaccatgtaattcagcaaaacaagacaccaagttgaggattaagggatatgaagaatgatgatcaaagtt 21813685  T
Q  837 tcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaaga 926  Q
     ||||||| | ||||||||||||||||||| |||||||| | ||| |||||||||   |||||  ||||||  ||| |||||||||||||    
T  21813686 acttagaaggattttgaagataatacaagttgggaaaaaattatcccaagttccaagacatttttagatggtagaatgctcgaaaaaaga 21813775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 669 - 864
Target Start/End: Original strand, 25883133 - 25883328
Alignment:
Q  669 tttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgaga 767  Q
    |||| ||||||| || |||| |||||| |  | |||||||||||||  ||||||||| || |||  ||| |||||||||||||||| |||| |||||||     
T  25883133 tttgaggaacatattatattgttttcactcgaatcgttgtaattcagttttatcctagattatgcaactacataggtgttttgagtgttttatagtgagg 25883232  T
Q  768 aatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||||||||| ||||  ||| |||||||||  ||  ||||||||| ||   |  |||||||||||| ||||||||||| ||| ||||||| |||||||    
T  25883233 aatcatgtacatcatcaaatcaagacatcttgttaaggatcaaggat-gaagaattgaagatcaagggttcttagaaggttgttgaagacaatacaa 25883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 707 - 860
Target Start/End: Complemental strand, 25919509 - 25919365
Alignment:
Q  707 gtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggagga 806  Q
    ||||||||| ||||||||||||||||  ||||||||| |||||||        ||||||| |||||||||||||   ||| ||||| ||||| || ||||    
T  25919509 gtaattcacttttatcctaaatcatgcaactccatagatgttttg--------tagtgaggaatcatgtaaatcgacaaaccaagatatcacatgaagga 25919418  T
Q  807 tcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    ||||| |||| || |||||||||||| | || |||| |||||||||||||||||    
T  25919417 tcaaggatatgaagattgaagatcaacgatttttag-aagtttttgaagataat 25919365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 705 - 866
Target Start/End: Original strand, 25188823 - 25188985
Alignment:
Q  705 ttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggag 804  Q
    ||||||||||| |||||| |||||||||  ||||||||  | ||||||| | ||||  ||  |||||||| ||||||||||| |||||||||||  | ||    
T  25188823 ttgtaattcacttttatcataaatcatgcaactccatatatattttgagccgttttgttgttaaatcatgaaaatcagtaaagcaagacatcacaagaag 25188922  T
Q  805 gatcaa-gtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagt 866  Q
    |||||| | |||| || | |||| ||||||||||||||  | |||||| |||| |||||||||    
T  25188923 gatcaaggaatatgaagaatgaatatcaatggttcttaagaggttttttaagacaatacaagt 25188985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 662 - 816
Target Start/End: Complemental strand, 33914654 - 33914504
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    |||| |||||| ||||||| ||||||| |||| | |  ||||||||||||||||||| |||| ||||||||  |||| ||    ||||||||| |||| |    
T  33914654 tcaacggtttgaggaacatattgtattgtttttactcgagtcgttgtaattcacgtt-atcccaaatcatgcaactctat----gttttgagtgttttgt 33914560  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatat 816  Q
    ||||||||||||||||||||    || |||||||||||||| ||||||||| ||||    
T  33914559 agtgagaaatcatgtaaatcgacgaatcaagacatcacgtgaaggatcaaggatat 33914504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 691 - 760
Target Start/End: Original strand, 16970291 - 16970360
Alignment:
Q  691 tttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttt 760  Q
    |||||||| |||||||||||||||||||||||||||||||| | ||| ||| ||||||| |||| |||||    
T  16970291 tttcatttaagtcgttgtaattcacgtttatcctaaatcataaaacttcatgggtgtttagagtgttttt 16970360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 768 - 865
Target Start/End: Original strand, 16970591 - 16970688
Alignment:
Q  768 aatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaag 865  Q
    |||||||||||||   ||| |||||||||| ||| ||||||||| |||| ||  ||||||| ||| ||||||||||| ||||||||||| ||||||||    
T  16970591 aatcatgtaaatcgacaaatcaagacatcatgtgaaggatcaaggatatgaagtttgaagaccaacggttcttagaaggtttttgaagaaaatacaag 16970688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 680 - 864
Target Start/End: Original strand, 28422494 - 28422677
Alignment:
Q  680 ttttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaa 778  Q
    ||||||||| ||||||||  | || ||||||||||| |||||| |||||||||  |||| || |||||||||| | |||| ||||||||||||||||| |    
T  28422494 ttttgtattgttttcattcgaatcattgtaattcacttttatc-taaatcatgcaactcaattggtgttttgaatgttttgtagtgagaaatcatgtaga 28422592  T
Q  779 tcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||   ||| ||| |||||||||| |||||  || |||| || ||||||| ||||| | | |||||| || |||||||| |||||||    
T  28422593 tcgacaaatcaatacatcacgtgaaggattgaggatatgaagattgaagttcaat-gatgttagaaggtatttgaagacaatacaa 28422677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 438 - 502
Target Start/End: Complemental strand, 1320188 - 1320124
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcaca 502  Q
    ||||||||||||||||||||||| ||||| | ||||||| |||| ||| ||||||||||||||||    
T  1320188 ttcattcaataatattttagagaattttctctatttctggtggattctggaaccctattttcaca 1320124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 662 - 851
Target Start/End: Complemental strand, 19263990 - 19263809
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||| ||| || |||| || ||| |  |||||||||||||||| |||||||||||||| ||  || |||| ||||||||        ||    
T  19263990 tcaatggtttgaggatcatattatattgttgtcactagagtcgttgtaattcacttttatcctaaatcaggatgctgcataagtgttttg--------ta 19263899  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagttttt 851  Q
    || || ||||||| |||||   ||| |||| |||||| || ||||||||| |||| || |||||||||||||||||| ||||| ||||||    
T  19263898 gtaaggaatcatggaaatcgtcaaatcaagtcatcacatgaaggatcaaggatatgaagattgaagatcaatggttcatagaaggttttt 19263809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 707 - 779
Target Start/End: Original strand, 27415236 - 27415309
Alignment:
Q  707 gtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaat 779  Q
    ||||||||| |||||| |||||||||  ||| |||||||||||||||| |||| |||| |||||||||||||||    
T  27415236 gtaattcacttttatcgtaaatcatgcaacttcataggtgttttgagtgttttgtagtaagaaatcatgtaaat 27415309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 662 - 809
Target Start/End: Original strand, 12573313 - 12573461
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| ||||   |||||||| |||||| |  || ||||||||||||  ||||||||| ||||||   |||| ||||| |||| ||| |||| |    
T  12573313 tcaatggtttgaggaatgctttgtattgttttcactcgagacgttgtaattcatttttatcctagatcatgcagctccgtaggtttttttagtgttttgt 12573412  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatca 809  Q
    |||||| ||||||||||||||  |||  ||||||| ||||| |||||||    
T  12573413 agtgaggaatcatgtaaatcaacaaatgaagacattacgtgaaggatca 12573461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 662 - 809
Target Start/End: Original strand, 13549777 - 13549925
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| ||||   |||||||| |||||| |  || ||||||||||||  ||||||||| ||||||   |||| ||||| |||| ||| |||| |    
T  13549777 tcaatggtttgaggaatgctttgtattgttttcactcgagacgttgtaattcatttttatcctagatcatgcagctccgtaggtttttttagtgttttgt 13549876  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatca 809  Q
    |||||| ||||||||||||||  |||  ||||||| ||||| |||||||    
T  13549877 agtgaggaatcatgtaaatcaacaaatgaagacattacgtgaaggatca 13549925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 662 - 770
Target Start/End: Complemental strand, 19546075 - 19545967
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||| | ||||||| |||| |||| |||| |||||||||||  |||||||| ||||||  | |  |||| |||||||||| ||||||    
T  19546075 tcaatggtttgaggaacttattgtattgtttttatttgagtcattgtaattcactattatcctatatcatgtaattttatagttgttttgagttttttta 19545976  T
Q  762 gtgagaaat 770  Q
     ||||||||    
T  19545975 atgagaaat 19545967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 963 - 1014
Target Start/End: Original strand, 10342332 - 10342383
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgt 1014  Q
    |||||||||||||||||||| ||||| ||||||||||||||| | |||||||    
T  10342332 tcctcctcttgttctctctagggtatatttttctattattttgttatgatgt 10342383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 2472828 - 2472760
Alignment:
Q  438 ttcattcaataatattttagagagtttt-cacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||| ||||||||||||||| ||||||| | ||||||||| |||| ||  |||||||||||||||||||    
T  2472828 ttcaatcaataatattttagtgagtttttctcaatttctggtggattccggaaccctattttcacaagt 2472760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 662 - 714
Target Start/End: Original strand, 12409481 - 12409533
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattca 714  Q
    |||||||||||  |||||| |||||||||||||| || |||||||||||||||    
T  12409481 tcaatggtttgaagaacatattgtattattttcacttgagtcgttgtaattca 12409533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 963 - 999
Target Start/End: Complemental strand, 14280828 - 14280792
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctatt 999  Q
    |||||||||||||||||||| ||||||||||||||||    
T  14280828 tcctcctcttgttctctctagggtatgtttttctatt 14280792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 586 - 642
Target Start/End: Complemental strand, 37626700 - 37626644
Alignment:
Q  586 acctaaaaccttaaaacattagatatatgaatcacctctattatatatccaacattt 642  Q
    |||||||| ||||| ||||||| |||||| || |||||| |||||||||||||||||    
T  37626700 acctaaaatcttaagacattaggtatatgtatgacctctcttatatatccaacattt 37626644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 674 - 780
Target Start/End: Complemental strand, 2729698 - 2729591
Alignment:
Q  674 ggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatca 772  Q
    ||||||| || |||| |||||| |  |||| ||||||||||  ||||||||||| ||||  ||| |||| ||||||||||| |||| |||||| |||||     
T  2729698 ggaacatattatattgttttcactcgagtccttgtaattcatttttatcctaaaccatgcaacttcatatgtgttttgagtgttttgtagtgataaatct 2729599  T
Q  773 tgtaaatc 780  Q
    ||||||||    
T  2729598 tgtaaatc 2729591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 963 - 1014
Target Start/End: Complemental strand, 19542630 - 19542579
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgt 1014  Q
    |||||||||||||||||||| ||||| |||||||| || ||||| |||||||    
T  19542630 tcctcctcttgttctctctagggtatatttttctactagtttataatgatgt 19542579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 765 - 864
Target Start/End: Complemental strand, 19543112 - 19543013
Alignment:
Q  765 agaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||||||||||| |||| | || |||||||||||| || |||||| || || | || ||||||  ||||| |||||||||| || |||||||| |||||||    
T  19543112 agaaatcatgttaatcgggaacacaagacatcacatgaaggatcgagaatgtaaagattgaatttcaatagttcttagaaggtatttgaagacaatacaa 19543013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 825 - 942
Target Start/End: Original strand, 21653531 - 21653650
Alignment:
Q  825 aagatcaatggttcttagaa-agtttttg-aagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaa 922  Q
    ||||||||||||||||| || | |||||| |||| |||| |||| ||| |||||||||| ||||||  |  |||||||||||  || |||||||||||||    
T  21653531 aagatcaatggttcttataagattttttgtaagacaataaaagttgggcaaaattcatcccaagttttaaggcatttcaagaccgaagaacgctcgaaaa 21653630  T
Q  923 aagacgaaaaatgcaaaatt 942  Q
    | || ||||| |||| ||||    
T  21653631 aggatgaaaattgcagaatt 21653650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 737 - 804
Target Start/End: Original strand, 26484767 - 26484834
Alignment:
Q  737 tccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggag 804  Q
    |||| ||| |||||||||| |||| |||| |||||||||||||| | ||| ||||||||||| |||||    
T  26484767 tccaaaggcgttttgagtcattttggtgataaatcatgtaaatcggcaaatcaagacatcacatggag 26484834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 666 - 732
Target Start/End: Complemental strand, 4775795 - 4775729
Alignment:
Q  666 tggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatg 732  Q
    ||||||||||||||| || |||| ||||||  | ||||||||||||||||  |||||||| ||||||    
T  4775795 tggtttgtggaacatattttattgttttcacctgagtcgttgtaattcactcttatcctagatcatg 4775729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 662 - 808
Target Start/End: Complemental strand, 27374543 - 27374398
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||  ||||  ||||||||| ||||||||  |||| || |||| ||  ||||||||||||||||  ||| | |||||  ||||| || |||||    
T  27374543 tcaatggtttaaggaagtttttgtattgttttcattcgagtcattataatccagttttatcctaaatcatgcaacttcgtaggttatttgaatc-tttta 27374445  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatc 808  Q
    ||| |||||||||| |||  | ||||||||| |||| ||| ||||||    
T  27374444 gtgcgaaatcatgtgaattggcaaaacaagagatcatgtgaaggatc 27374398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 586 - 656
Target Start/End: Complemental strand, 43481687 - 43481617
Alignment:
Q  586 acctaaaaccttaaaacattagatatatgaatcacctctattatatatccaacatttcctccaatcctagt 656  Q
    |||||||| |||||  ||| || ||||||  || ||||| ||||||||||||||||||||||| |||||||    
T  43481687 acctaaaatcttaatgcatcaggtatatgggtcccctctcttatatatccaacatttcctccattcctagt 43481617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 435 - 476
Target Start/End: Original strand, 52708801 - 52708842
Alignment:
Q  435 tttttcattcaataatattttagagagttttcacaatttctg 476  Q
    ||||| |||||||||||||||||||||||||| |||| ||||    
T  52708801 ttttttattcaataatattttagagagttttctcaatatctg 52708842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 6e-40; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 681 - 865
Target Start/End: Complemental strand, 5312858 - 5312674
Alignment:
Q  681 tttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatc 780  Q
    |||||||| ||||||||| |||||||||||||||| |||||| || | ||||  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  5312858 tttgtattgttttcatttgagtcgttgtaattcacttttatcttatagcatgcaactccataggtgttttgagtctttttagtgataaatcatgtaaatc 5312759  T
Q  781 agtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaag 865  Q
     | ||||  | |||||| ||| ||||||||| |||| |  |||||| || ||||||||||||||  |||||||||| ||||||||    
T  5312758 ggcaaaaataaacatcaagtgaaggatcaaggatatgaggattgaacataaatggttcttagaagatttttgaagacaatacaag 5312674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 662 - 933
Target Start/End: Original strand, 18496588 - 18496859
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||| ||||| |||||  |||| ||| ||||||||  | || ||||||||||  |||||||||||||||| |||| ||||||||||||||| || |||     
T  18496588 tcaattgtttgaggaactatttgaattgttttcattcgaatcattgtaattcatttttatcctaaatcatgcgacttcataggtgttttgagcctatttg 18496687  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    |||||| |||||||||||| | |||||  ||||||  ||| ||||||||| |||| || ||||||||  |||||||||||||| ||| ||||||| ||||    
T  18496688 gtgagatatcatgtaaatcggaaaaacgggacatcgagtgaaggatcaaggatatgaagattgaagaataatggttcttagaatgttgttgaagaaaata 18496787  T
Q  862 caagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaa 933  Q
    ||||  |   ||||||||| ||||||||||  ||||||||||| | | ||||| |||||||| | |||||||    
T  18496788 caagatgaagaaaattcatttcaagttccaaggcatttcaagacgtaagaacggtcgaaaaagggcgaaaaa 18496859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 664 - 864
Target Start/End: Original strand, 30405621 - 30405819
Alignment:
Q  664 aatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagt 763  Q
    ||||||||| ||||| ||||||||| |||| |||| | || ||||||||||| ||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  30405621 aatggtttgaggaactttttgtattgtttttatttgactcattgtaattcac-tttatcctaaaccatgcaactccataggtgttttgagt-tttttagt 30405718  T
Q  764 gagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataataca 863  Q
    ||||||||||||||||| | |||| |||| |||| ||| |||||| || |||| || ||||||| |||||| ||||||||| || |||||| | ||||||    
T  30405719 gagaaatcatgtaaatcggcaaaataagaaatcatgtgaaggatcgaggatatgaagattgaagttcaatgattcttagaaggtatttgaatacaataca 30405818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 666 - 841
Target Start/End: Complemental strand, 3269053 - 3268878
Alignment:
Q  666 tggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtga 765  Q
    ||||||| | ||||||||||||| ||||| ||| ||| |||||||||||| ||||||||||||||||  ||| | || ||||||| ||||||||||||||    
T  3269053 tggtttgagtaacattttgtattgttttcgtttgagttgttgtaattcacttttatcctaaatcatgcaacttcgtatgtgttttaagtctttttagtga 3268954  T
Q  766 gaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttctta 841  Q
    ||||||||||||||| | ||||||||| ||||| || |||||||||||||| || | |||| || |||| ||||||    
T  3268953 gaaatcatgtaaatcggcaaaacaagatatcacatgaaggatcaagtatatgaagaatgaaaattaatgattctta 3268878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 700 - 844
Target Start/End: Complemental strand, 24597057 - 24596913
Alignment:
Q  700 agtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacg 799  Q
    |||||||||||||||  ||||||||||||||||  ||||| |||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||    
T  24597057 agtcgttgtaattcaattttatcctaaatcatgcaactccgtaggtgttttaagtctttttagtgagaaatcgtgtaaatcggcaaaacaagacatcacg 24596958  T
Q  800 tggaggatcaagtatatcaatattgaagatcaatggttcttagaa 844  Q
    |||| |||| || |||| || ||||||| ||| |||||| |||||    
T  24596957 tggaagatcgaggatataaagattgaagttcagtggttcatagaa 24596913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 679 - 861
Target Start/End: Complemental strand, 12358836 - 12358655
Alignment:
Q  679 attttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaa 778  Q
    |||||||||| || |||||| |||||||||||||||  |||||||||||||||   ||| |||||||||||||||||||||||||||||||| || ||||    
T  12358836 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 12358737  T
Q  779 tcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    || | ||| ||| | |||   | || ||||||| |||| || |||||||||||||||||||||||| ||||||||||| ||||    
T  12358736 tcggaaaagcaaaatatcttat-gaagatcaaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaata 12358655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 662 - 864
Target Start/End: Original strand, 29544542 - 29544745
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttt- 760  Q
    ||||| ||||| ||||||| ||||||| |||||| |  |||||||||||||||| ||| ||||||||  ||  | |||||| ||||||||||| |||||     
T  29544542 tcaatagtttgaggaacatattgtattgttttcactcgagtcgttgtaattcacttttctcctaaattgtgcaattccataagtgttttgagtgtttttt 29544641  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    ||| || |||||||||||||   ||| ||||||||||| || ||||||||  |||| || |||||||||||||| ||||||||| ||||||||||| |||    
T  29544642 agtaaggaatcatgtaaatcgacaaaccaagacatcacatgaaggatcaaagatatgaagattgaagatcaatgattcttagaaggtttttgaagacaat 29544741  T
Q  861 acaa 864  Q
    ||||    
T  29544742 acaa 29544745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 662 - 828
Target Start/End: Complemental strand, 20461739 - 20461573
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| |||||| |||||||| ||||||||  ||||||||||| |||  || ||||||||||| |  ||   |||||||||| |||||||||||    
T  20461739 tcaatggtttgaggaacaatttgtattgttttcattcgagtcgttgtaactcaatttcatcctaaatcacgcaacatgataggtgtttcgagtcttttta 20461640  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaaga 828  Q
    ||||||||||||||||||| | |||| ||||||||| ||| ||||||||| |||| || ||||||||    
T  20461639 gtgagaaatcatgtaaatcggcaaaataagacatcaagtgaaggatcaaggatatgaagattgaaga 20461573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 682 - 811
Target Start/End: Complemental strand, 8309103 - 8308974
Alignment:
Q  682 ttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaatca 781  Q
    ||||||| ||||||||| |||| |||| ||| |  ||||||||||||||||  ||||||||  ||||||||||||||||||| |||||||||||||||||    
T  8309103 ttgtattgttttcatttgagtcattgtgatttagttttatcctaaatcatgcaactccatacatgttttgagtctttttagtaagaaatcatgtaaatca 8309004  T
Q  782 gtaaaacaagacatcacgtggaggatcaag 811  Q
    | |||||||||||||||||| || ||||||    
T  8309003 gcaaaacaagacatcacgtgaagaatcaag 8308974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 676 - 856
Target Start/End: Complemental strand, 9761493 - 9761313
Alignment:
Q  676 aacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttt-ttagtgagaaatcatg 774  Q
    ||||| ||||||| |||||| | ||||||||||||||||| ||||||||| || |||  | |||||||||||||||||| |||  |||||| ||||||||    
T  9761493 aacatattgtatttttttcactctagtcgttgtaattcacttttatcctagattatgcaattccataggtgttttgagtttttaatagtgataaatcatg 9761394  T
Q  775 taaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaaga 856  Q
    ||||||   ||| |||||||||||||| ||||||||| |||| || ||||||| ||||||||||||| || |||||| ||||    
T  9761393 taaatcgacaaatcaagacatcacgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaaga 9761313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 662 - 865
Target Start/End: Original strand, 1074475 - 1074679
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| |||||   ||||||||||||||||  | || ||||||||  | |||||||||||| ||   |||||||| |||||||| ||||||| |    
T  1074475 tcaatggtttgaggaaccaattgtattattttcattcgattcattgtaatttgcttttatcctaaattatacaactccataagtgttttgtgtctttttt 1074574  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    |||||||||||||||||||  | ||| |||||||||| ||  ||||||||| |||| || |||||||| |||||||||||| || ||| ||||||| |||    
T  1074575 agtgagaaatcatgtaaattggaaaagcaagacatcaagtaaaggatcaaggatatgaaaattgaagaccaatggttcttaaaaggttgttgaagacaat 1074674  T
Q  861 acaag 865  Q
    |||||    
T  1074675 acaag 1074679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 662 - 864
Target Start/End: Complemental strand, 20470902 - 20470699
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| ||||||| || |||| |||||| || |||||||||||||||| || | |||||||||||   || ||||| |||||||||| |||| |    
T  20470902 tcaatggtttgaggaacatattatattgttttcacttaagtcgttgtaattcactttcagcctaaatcatgcatctgcatagctgttttgagtgttttat 20470803  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    ||||| ||| ||||||||||   ||| ||||||||| | || | ||||||| || | |||||||||| |||||||||||||||| ||| ||||||| |||    
T  20470802 agtgataaagcatgtaaatcgacaaatcaagacatcgcatgaacgatcaaggatgtgaatattgaagttcaatggttcttagaaggttcttgaagacaat 20470703  T
Q  861 acaa 864  Q
    ||||    
T  20470702 acaa 20470699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 665 - 891
Target Start/End: Complemental strand, 22532732 - 22532507
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaa--tcatgagactccataggtgttttgagtctttttag 762  Q
    |||||||| |||||||||| |||| ||||||||  | ||| | |||||||| |||||||||||  |||||  |||  ||  ||||| ||||| |||||||    
T  22532732 atggtttgaggaacattttctattgttttcattggattcgctataattcacttttatcctaaaaatcatggaacttgat--gtgttatgagtatttttag 22532635  T
Q  763 tgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatac 862  Q
    |||||||||||||||||| | ||| ||||||||||| ||  ||||| || |||  || | |||| ||||||||||||||||||||||||||||| ||| |    
T  22532634 tgagaaatcatgtaaatcggcaaa-caagacatcacatgatggatcgaggatacgaagaatgaatatcaatggttcttagaaagtttttgaagacaatcc 22532536  T
Q  863 aagtcgggaaaaattcatctcaagttcca 891  Q
    ||||   | ||||||||||||||||||||    
T  22532535 aagttatggaaaattcatctcaagttcca 22532507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 676 - 864
Target Start/End: Complemental strand, 9801952 - 9801764
Alignment:
Q  676 aacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttt-ttagtgagaaatcatg 774  Q
    ||||| ||||||| |||||| | ||||||||||||||||| ||||||||| || |||  | |||||||||||||||||| |||  |||||| ||||||||    
T  9801952 aacatattgtatttttttcactctagtcgttgtaattcacttttatcctagattatgcaattccataggtgttttgagtttttaatagtgataaatcatg 9801853  T
Q  775 taaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||||||   ||| ||| |||||| ||| ||||||||| |||| || ||||||| ||||||||||||| || |||||| |||| |||||||    
T  9801852 taaatcgacaaatcaaaacatcatgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaagaaaatacaa 9801764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 674 - 841
Target Start/End: Original strand, 23124935 - 23125103
Alignment:
Q  674 ggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatca 772  Q
    ||||||| ||||||| |||||| |  |||||||||||||||| ||||||| |||||||   |||| ||||||||||||||| |||| |||||||||||||    
T  23124935 ggaacatattgtattgttttcactcgagtcgttgtaattcacatttatccaaaatcatacaactctataggtgttttgagtgttttctagtgagaaatca 23125034  T
Q  773 tgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttctta 841  Q
    ||||||||    || |||||||||| ||| |||||| || |||| || ||||||| |||||||||||||    
T  23125035 tgtaaatcgaccaatcaagacatcatgtgaaggatcgaggatatgaagattgaagttcaatggttctta 23125103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 662 - 864
Target Start/End: Original strand, 7142121 - 7142323
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||  ||||||| || ||||  ||||| |  |||||||||||||||| ||||||| | ||||||  |||||||||||||||| ||| |||| |    
T  7142121 tcaatggtttaaggaacatattttattgctttcactcgagtcgttgtaattcacttttatccaagatcatgcaactccataggtgttttaagtgttttgt 7142220  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataat 860  Q
    ||||||||||||||||||||   ||| |||||||||||||| ||||||||  |||| || ||||||  || |||||| |||  | ||||||||||| |||    
T  7142221 agtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaagatatgaagattgaa-ttcgatggtttttaataggtttttgaagagaat 7142319  T
Q  861 acaa 864  Q
    ||||    
T  7142320 acaa 7142323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 669 - 932
Target Start/End: Complemental strand, 2353326 - 2353062
Alignment:
Q  669 tttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgaga- 767  Q
    |||| ||||||||||||||| | ||||||  || |||||||||||||    |||||||||||||  ||||||||||||||||| | |||||||||||||     
T  2353326 tttggggaacattttgtattgtattcattcgagacgttgtaattcac----atcctaaatcatgcaactccataggtgttttgggcctttttagtgagaa 2353231  T
Q  768 ---aatcatgtaaatcagtaaaacaagacatcacgtggaggatcaa-gtatatcaatattgaagatcaatggttcttagaaagtttttgaagataataca 863  Q
       |||||||||||||   ||| ||||||||| | ||  ||||||| | || | || | ||||||||||||||| |||||| || |||  ||| ||||||    
T  2353230 attaatcatgtaaatcgacaaagcaagacatctcatgatggatcaatggatgtgaaaaatgaagatcaatggttattagaaggtgtttatagacaataca 2353131  T
Q  864 agtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaa 932  Q
     |  | |||||||||||||||||||| |  || |||||||| ||| || ||||||||||| || |||||    
T  2353130 tgatgagaaaaattcatctcaagttctaaggcttttcaagacggaagatcgctcgaaaaaggatgaaaa 2353062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 674 - 792
Target Start/End: Complemental strand, 17881578 - 17881460
Alignment:
Q  674 ggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcat 773  Q
    ||||| ||||||||||||||||||  | || |||||||| |  |||||| |||||||||  |||  |||||| |||||||||||||||||||||| ||||    
T  17881578 ggaactttttgtattattttcattcgaatcattgtaatttaattttatcataaatcatgcaacttaataggtattttgagtctttttagtgagaagtcat 17881479  T
Q  774 gtaaatcagtaaaacaaga 792  Q
    ||||||| | |||||||||    
T  17881478 gtaaatcggaaaaacaaga 17881460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 745 - 875
Target Start/End: Original strand, 14649609 - 14649732
Alignment:
Q  745 tgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaa 844  Q
    ||||||||||||||||||| | ||||||||||||  || ||||||||| |||||       |||||| |||| |||| ||||||||||||||| ||||||    
T  14649609 tgttttgagtctttttagtaaaaaatcatgtaaaatagcaaaacaagaaatcac-------atcaaggatatgaataatgaagatcaatggttattagaa 14649701  T
Q  845 agtttttgaagataatacaagtcgggaaaaa 875  Q
     ||||||||||| ||||||||| ||| ||||    
T  14649702 ggtttttgaagacaatacaagttggggaaaa 14649732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 717 - 864
Target Start/End: Original strand, 21471874 - 21472021
Alignment:
Q  717 tttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtata 815  Q
    ||||||||| ||||||  | |||||||||||||||||| |||| ||||||| |||||||||||||| |||| || |||||||||||  |||||||| ||     
T  21471874 tttatcctagatcatgcaattccataggtgttttgagtgttttgtagtgaggaatcatgtaaatcaataaatcatgacatcacgtgagggatcaaggat- 21471972  T
Q  816 tcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
      |  ||||||||| || ||||||||||| ||| ||||||| |||||||    
T  21471973 gaagaattgaagataaagggttcttagaaggttattgaagaaaatacaa 21472021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 666 - 866
Target Start/End: Complemental strand, 7372654 - 7372455
Alignment:
Q  666 tggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatc-ctaaatcatgagactccataggtgttttgagtcttttt-agt 763  Q
    |||||||  |||| ||||||||| ||||||||  |||||||||||||||  |||||| | ||||||||  ||| |||||||||||| ||| ||||| |||    
T  7372654 tggtttgatgaactttttgtattgttttcattcgagtcgttgtaattcaattttatcacgaaatcatgcaacttcataggtgttttcagtgttttttagt 7372555  T
Q  764 gagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataataca 863  Q
    |||||||| |||||||||| ||| ||||| ||||  || ||||||||| |||| ||  | |||| ||||| | ||||||||  ||||| |||| ||||||    
T  7372554 gagaaatcttgtaaatcagcaaatcaagatatca--tgaaggatcaaggatataaagctggaagttcaat-gatcttagaagatttttaaagacaataca 7372458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 662 - 864
Target Start/End: Complemental strand, 22067898 - 22067692
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccatagg--tgttttgagtctttt 759  Q
    ||||||||||| |||||||  |||||| |||||| |  |||| ||||||||||  ||||||||| ||||||  ||||||||||  | |||||||| ||||    
T  22067898 tcaatggtttgaggaacataatgtattgttttcactcgagtcattgtaattcaattttatcctagatcatgcaactccataggtattttttgagtgtttt 22067799  T
Q  760 -tagtgagaaatc--atgtaaatcagtaaaacaagacatcacgtggaggatcaagtat-atcaatattgaagatcaatggttcttagaaagtttttgaag 855  Q
     ||||||| ||||  ||||||||||  ||| |||||||||| ||| ||||||||| || | ||  |||||| ||||| ||||||||||| ||| ||||||    
T  22067798 gtagtgaggaatcatatgtaaatcatcaaatcaagacatcatgtgaaggatcaaggatgaaca--attgaaaatcaagggttcttagaaggttgttgaag 22067701  T
Q  856 ataatacaa 864  Q
    | |||||||    
T  22067700 acaatacaa 22067692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 735 - 933
Target Start/End: Original strand, 25706250 - 25706448
Alignment:
Q  735 actccataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagt-atatcaatattgaagatcaat 833  Q
    |||||||||||||||| |||||||||  ||  ||||| ||||| || | ||||||||||| | | || |||||||||  || | || | |||||| ||||    
T  25706250 actccataggtgttttaagtctttttgttgctaaatcttgtaattcggaaaaacaagacacctcatgaaggatcaagggatttaaagagtgaaga-caat 25706348  T
Q  834 ggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaa 933  Q
    ||||||| ||| ||||||||||| |||| |||| ||| |||||||||| ||||||||||  || ||||| | ||| ||||||||||| || ||| |||||    
T  25706349 ggttcttggaaggtttttgaagacaatataagttggggaaaattcatcccaagttccatgacaattcaatacggaagaacgctcgaagaaggacaaaaaa 25706448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 396 - 505
Target Start/End: Complemental strand, 8916561 - 8916449
Alignment:
Q  396 cctagcatttaagcttaacatttgtaacctaacag---acagtttttcattcaataatattttagagagttttcacaatttctgctggactctagaaccc 492  Q
    ||||| |||||||||||||| ||||||| ||| ||   ||  || ||||||||||||||||||||||||||||| ||||||||| |||| || ||||| |    
T  8916561 cctagtatttaagcttaacagttgtaacataagaggaaacttttattcattcaataatattttagagagttttctcaatttctggtggattccagaactc 8916462  T
Q  493 tattttcacaagt 505  Q
    ||||| |||||||    
T  8916461 tatttccacaagt 8916449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 791 - 861
Target Start/End: Complemental strand, 21545789 - 21545719
Alignment:
Q  791 gacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    ||||||||||| ||||||||| |||| || ||||||||||||||||||||||||||| |||||||| ||||    
T  21545789 gacatcacgtgaaggatcaaggatatgaagattgaagatcaatggttcttagaaagtatttgaagacaata 21545719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 662 - 776
Target Start/End: Original strand, 4828814 - 4828926
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||| ||||||||| |||| | |  | || |||||||| || ||||||||||||||||  ||||||||| ||  |||||||||||||    
T  4828814 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttta 4828911  T
Q  762 gtgagaaatcatgta 776  Q
     ||||||||||||||    
T  4828912 atgagaaatcatgta 4828926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 662 - 816
Target Start/End: Original strand, 7815346 - 7815501
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||  | ||||| ||||||| |||||| |   || |||||||||||  ||||| ||||||||||  ||| |||||||||||||||| |||| |    
T  7815346 tcaatggtttaagaaacatattgtatttttttcactcgggtggttgtaattcagttttattctaaatcatgcaacttcataggtgttttgagtgttttgt 7815445  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatat 816  Q
    |||||  ||||||||||||||  |||  ||||||||| ||| ||||||||| ||||    
T  7815446 agtgatgaatcatgtaaatcaacaaataaagacatcatgtgaaggatcaaggatat 7815501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 438 - 501
Target Start/End: Complemental strand, 11000965 - 11000902
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcac 501  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| ||  |||||||||||||||    
T  11000965 ttcattcaataatattttagagagttttcccaatttctggtggattcctgaaccctattttcac 11000902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 435 - 502
Target Start/End: Complemental strand, 18790314 - 18790247
Alignment:
Q  435 tttttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcaca 502  Q
    ||||||||||| |||||||||||||||||||| ||||||||| |||| |||| || ||||||||||||    
T  18790314 tttttcattcagtaatattttagagagttttctcaatttctggtggattctaaaatcctattttcaca 18790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 662 - 811
Target Start/End: Complemental strand, 1255305 - 1255155
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    ||||||||||| |||| |  ||||||| |||||| |  |||| ||||||||||  ||||||||||||||||  ||| |||||||||||||||| |||| |    
T  1255305 tcaatggtttgaggaataaattgtattgttttcactcgagtcattgtaattcatttttatcctaaatcatgcaacttcataggtgttttgagtgttttgt 1255206  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaag 811  Q
    | ||| |||| || |||||||  ||| ||| ||||||| || |||||||||    
T  1255205 aatgaaaaattatttaaatcaacaaatcaaaacatcacatgaaggatcaag 1255155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 1786594 - 1786694
Alignment:
Q  402 atttaagcttaacatttgtaacctaacag---acagtttttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctatttt 498  Q
    |||||||||||||| ||||| ||||| ||   ||  || |||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||    
T  1786594 atttaagcttaacagttgtagcctaagaggaaacttttattcattaaataatattttagagagttttcgcaatttctgatggattctggaaccctatttt 1786693  T
Q  499 c 499  Q
    |    
T  1786694 c 1786694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 740 - 797
Target Start/End: Complemental strand, 7326884 - 7326827
Alignment:
Q  740 ataggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatca 797  Q
    |||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||    
T  7326884 ataggtgttttgagtcattttagtgagaaatcatataaatcagcaaagcaagacatca 7326827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 662 - 750
Target Start/End: Complemental strand, 21545891 - 21545803
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgtttt 750  Q
    ||||||||||| ||||||| ||||||| |||||| |  ||||||||||| |||| ||||||||||||||||  ||| ||||||| ||||    
T  21545891 tcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaactcacttttatcctaaatcatgcaactacataggtttttt 21545803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 445 - 505
Target Start/End: Original strand, 24840100 - 24840160
Alignment:
Q  445 aataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||||||||||||||| ||||||||| |||| ||  |||||||||||||||||||    
T  24840100 aataatattttagagagttttctcaatttctggtggattccggaaccctattttcacaagt 24840160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 743 - 810
Target Start/End: Complemental strand, 3487376 - 3487309
Alignment:
Q  743 ggtgttttgagtctttttagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaa 810  Q
    ||||||||||||||||||| ||||||||||||| |||| | ||||||||||||||  || ||||||||    
T  3487376 ggtgttttgagtctttttaatgagaaatcatgtgaatcggcaaaacaagacatcaaatgaaggatcaa 3487309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 682 - 807
Target Start/End: Original strand, 10292797 - 10292923
Alignment:
Q  682 ttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatc 780  Q
    ||||||| |||||| |  |||||||||||||||  ||||||| | ||||||  || |||||||||||| || | |||| ||||||| |||||||||||||    
T  10292797 ttgtatttttttcaatcgagtcgttgtaattcagttttatccaagatcatgcaacaccataggtgtttagactattttgtagtgaggaatcatgtaaatc 10292896  T
Q  781 agtaaaacaagacatcacgtggaggat 807  Q
    |  ||| |||||||||| ||| |||||    
T  10292897 atcaaatcaagacatcatgtgaaggat 10292923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 438 - 503
Target Start/End: Complemental strand, 1690270 - 1690205
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaa 503  Q
    |||||| |||| ||||||||||| ||||| ||||||||| |||| || ||||||||||||||||||    
T  1690270 ttcattaaatactattttagagaattttctcaatttctgatggattccagaaccctattttcacaa 1690205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 966 - 1015
Target Start/End: Original strand, 9552725 - 9552774
Alignment:
Q  966 tcctcttgttctctctatggtatgtttttctattattttatgatgatgtc 1015  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  9552725 tcctcttgttctctctagggtatatttttctattattttgtgatgatgtc 9552774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 402 - 502
Target Start/End: Original strand, 11228892 - 11228995
Alignment:
Q  402 atttaagcttaacatttgtaacctaacagacagttttt---cattcaataatattttagagagttttcacaatttctgctggactctagaaccctatttt 498  Q
    |||||||||||||||||||| | ||| || ||  ||||   || |||||||||||||||||||||||  ||||||||| |||| ||| ||||||| ||||    
T  11228892 atttaagcttaacatttgtagcataagaggcaacttttattcactcaataatattttagagagttttatcaatttctggtggattctggaaccctttttt 11228991  T
Q  499 caca 502  Q
    ||||    
T  11228992 caca 11228995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 1365621 - 1365689
Alignment:
Q  438 ttcattcaataatattttagagag-ttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||||||||||||||||| ||||| |||||| || |||| | | |||||||||||||||||||    
T  1365621 ttcattcaataatattttagagagtttttctcaatttttggtggattatggaaccctattttcacaagt 1365689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 441 - 505
Target Start/End: Original strand, 1369758 - 1369822
Alignment:
Q  441 attcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||||||||| ||||||||| ||||||||| |||| ||  |||||||||||| ||||||    
T  1369758 attcaataatattttatagagttttctcaatttctggtggattccggaaccctattttaacaagt 1369822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 963 - 1015
Target Start/End: Original strand, 9760676 - 9760728
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgtc 1015  Q
    ||||||| |||||||||||| ||||||||||||||||||||| | ||||||||    
T  9760676 tcctcctattgttctctctaaggtatgtttttctattattttgtaatgatgtc 9760728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 665 - 943
Target Start/End: Original strand, 2351023 - 2351301
Alignment:
Q  665 atggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtg 764  Q
    |||||||| | ||||||||||||| ||||||||  |||  ||||||||||  ||  |||  ||||||| ||||  |||||||| || |||||||||| ||    
T  2351023 atggtttgagaaacattttgtattgttttcattccagttattgtaattcaatttcttccataatcatgcgactttataggtgtcttaagtctttttattg 2351122  T
Q  765 agaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaa-gtatatcaatattgaagatcaatggttcttagaaagtttttgaagataataca 863  Q
    | ||||| ||||| |||| |||| |||||| ||  || | ||| || | || | || | |||| ||||||||  |||| |||| |||| |||| ||||||    
T  2351123 ataaatcgtgtaattcagaaaaagaagacaacaaatgaaagatgaatggatttgaagaatgaatatcaatggaacttaaaaagctttt-aagaaaataca 2351221  T
Q  864 agtcgggaaaaattcatctcaagttccattgcatttcaagatggatgaacgctcgaaaaaagacgaaaaatgcaaaattc 943  Q
    |||  |||||||||| || |||||||      |||||||||| || |||| |||||||||  |||||||||||| |||||    
T  2351222 agttaggaaaaattcttcccaagttctcagatatttcaagatagaagaactctcgaaaaagaacgaaaaatgcataattc 2351301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 5934554 - 5934621
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    ||||||||||||||||||||||| ||||| ||||||||  |||| |||  || |||||||||||||||    
T  5934554 ttcattcaataatattttagagaattttctcaatttctaatggattctgaaatcctattttcacaagt 5934621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 447 - 505
Target Start/End: Original strand, 11228679 - 11228738
Alignment:
Q  447 taatattttagagagttttcacaa-tttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||||||||||||| ||| |||||| |||| ||||||||||||||| |||||||    
T  11228679 taatattttagagagttttctcaattttctggtggattctagaaccctatttccacaagt 11228738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 35814821 - 35814888
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    ||||||||||||||||||||||||||||| |||||| || | || || |||||| |||||| ||||||    
T  35814821 ttcattcaataatattttagagagttttctcaatttatggtagattcaagaaccttatttttacaagt 35814888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 680 - 751
Target Start/End: Original strand, 37144961 - 37145032
Alignment:
Q  680 ttttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttg 751  Q
    ||||||||||||||||||  ||||||||||||  |  ||||||||||||||||  ||||| |||||||||||    
T  37144961 ttttgtattattttcattcaagtcgttgtaatatatttttatcctaaatcatgcaactccgtaggtgttttg 37145032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 968 - 1014
Target Start/End: Complemental strand, 7777626 - 7777580
Alignment:
Q  968 ctcttgttctctctatggtatgtttttctattattttatgatgatgt 1014  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||||    
T  7777626 ctcttgttctctctagggtatgtttttctattgttttattatgatgt 7777580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 963 - 1016
Target Start/End: Original strand, 9801118 - 9801171
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgtcc 1016  Q
    |||||||||||||||||||| ||| |||||||| |||||||| | |||||||||    
T  9801118 tcctcctcttgttctctctagggtgtgtttttcaattattttgtaatgatgtcc 9801171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 674 - 754
Target Start/End: Complemental strand, 2632516 - 2632436
Alignment:
Q  674 ggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagt 754  Q
    ||||||| |||||||||||||| |  | |||||||||||||  ||||||| | ||||||  ||| ||||||||||||||||    
T  2632516 ggaacatattgtattattttcaatcgaatcgttgtaattcagttttatccaagatcatgcaacttcataggtgttttgagt 2632436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 963 - 1015
Target Start/End: Complemental strand, 5312317 - 5312265
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgtc 1015  Q
    |||||||||||||||||||| |||||||||||| ||| |||| | ||||||||    
T  5312317 tcctcctcttgttctctctagggtatgtttttcaattgttttgtaatgatgtc 5312265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 19140060 - 19140020
Alignment:
Q  674 ggaacattttgtattattttcattttagtcgttgtaattca 714  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  19140060 ggaacattttgtattatttttatttgagtcgttgtaattca 19140020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 674 - 714
Target Start/End: Complemental strand, 20739459 - 20739419
Alignment:
Q  674 ggaacattttgtattattttcattttagtcgttgtaattca 714  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  20739459 ggaacattttgtattatttttatttgagtcgttgtaattca 20739419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 445 - 505
Target Start/End: Original strand, 27142623 - 27142683
Alignment:
Q  445 aataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagt 505  Q
    |||||||||| ||||||||||| ||||||||| |||  ||  |||||||||||||||||||    
T  27142623 aataatatttcagagagttttctcaatttctggtggtttcaggaaccctattttcacaagt 27142683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 669 - 864
Target Start/End: Original strand, 46054728 - 46054920
Alignment:
Q  669 tttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaa 768  Q
    |||| |||||| ||| |||| |||| |||  ||||||||||||| || |||||  |||||||||  ||| ||||   |||||||| || |||||| ||||    
T  46054728 tttgaggaacaatttatattgttttaattcaagtcgttgtaatttacttttataataaatcatgcaacttcata--agttttgagcctctttagttagaa 46054825  T
Q  769 atcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    || ||||||||  | |||||||||| |||| |  ||||| ||  |||| || ||||||||| ||| | ||||| |||||| ||||||| |||||||    
T  46054826 attatgtaaattggcaaaacaagacgtcacataaaggattaaagatatgaagattgaagattaat-gatcttacaaagttgttgaagacaatacaa 46054920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 497
Target Start/End: Complemental strand, 4956003 - 4955944
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattt 497  Q
    |||||||||||||||||||| |||||||| ||||||||  |||| ||||| || ||||||    
T  4956003 ttcattcaataatattttagggagttttctcaatttctaatggattctaggactctattt 4955944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 744
Target Start/End: Original strand, 7956223 - 7956286
Alignment:
Q  681 tttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccatagg 744  Q
    |||||||| ||||||||  |||||||||||||| | |||||| ||||||| || ||||||||||    
T  7956223 tttgtattgttttcattcgagtcgttgtaattcgcttttatcttaaatcaagaaactccatagg 7956286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 963 - 1014
Target Start/End: Complemental strand, 17880481 - 17880430
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgt 1014  Q
    ||||||| |||||||||||||||||||||||  ||||||||| | |||||||    
T  17880481 tcctcctattgttctctctatggtatgttttattattattttgtaatgatgt 17880430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 402 - 502
Target Start/End: Complemental strand, 6451928 - 6451825
Alignment:
Q  402 atttaagcttaacatttgtaacctaacagacagtttt---tcattcaataatattttagagagttttcacaatttctgctggactctagaaccctatttt 498  Q
    |||||| ||||||| ||||| ||||| |||||  |||   |||||||||||||||||||||||||||  |||||| || |||| ||   |||| ||||||    
T  6451928 atttaaacttaacagttgtagcctaagagacaactttaattcattcaataatattttagagagttttttcaatttttgttggattccgaaaccttatttt 6451829  T
Q  499 caca 502  Q
    ||||    
T  6451828 caca 6451825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 966 - 1015
Target Start/End: Complemental strand, 24596531 - 24596482
Alignment:
Q  966 tcctcttgttctctctatggtatgtttttctattattttatgatgatgtc 1015  Q
    |||||||||||||||||  |||||||||| |||| |||||| ||||||||    
T  24596531 tcctcttgttctctctagtgtatgtttttatattgttttataatgatgtc 24596482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 648
Target Start/End: Complemental strand, 31412620 - 31412559
Alignment:
Q  587 cctaaaaccttaaaacattagatatatgaatcacctctattatatatccaacatttcctcca 648  Q
    |||||| |||||| ||||||||||||||||  |||||| ||| ||||||||| |||| ||||    
T  31412620 cctaaatccttaagacattagatatatgaactacctctcttacatatccaacctttcatcca 31412559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 700 - 864
Target Start/End: Complemental strand, 27009 - 26844
Alignment:
Q  700 agtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcac 798  Q
    |||| |||||||| || |||||||||||||||   ||| |||||||||||||||| |||  |||||||||||||||||||||   |||  ||||||||||    
T  27009 agtcattgtaatttacttttatcctaaatcatacaactacataggtgttttgagtgtttagtagtgagaaatcatgtaaatcgacaaattaagacatcac 26910  T
Q  799 gtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||| | ||||||| |||| || ||||||| |||||||||||||||||||| ||||||| |||||||    
T  26909 gtgaaagatcaaggatatgaaaattgaagttcaatggttcttagaaagttcttgaagacaatacaa 26844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 68; Significance: 8e-30; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 658 - 864
Target Start/End: Original strand, 21416 - 21623
Alignment:
Q  658 gatctcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctt 757  Q
    ||||| || |||||| ||||| | ||||||| |||||| |  |||||||||||||||| ||||||||||||||||  ||| ||||  ||||||| || ||    
T  21416 gatctaaagggtttgaggaacttattgtattgttttcactcgagtcgttgtaattcacttttatcctaaatcatgcaacttcataattgttttgggtgtt 21515  T
Q  758 ttt-agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaaga 856  Q
    ||  |||||| |||||||||||||   ||| |||||||| || || ||||||||  |||| || |||||||||||||||||||||||| |||||| ||||    
T  21516 ttgcagtgaggaatcatgtaaatcgacaaaccaagacattacatgaaggatcaatgatatgaagattgaagatcaatggttcttagaaggtttttaaaga 21615  T
Q  857 taatacaa 864  Q
     |||||||    
T  21616 caatacaa 21623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 767 - 864
Target Start/End: Original strand, 6324 - 6420
Alignment:
Q  767 aaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||||||||||||||   ||| |||||||||||||| ||||||||| |||| || |||||||| ||||||||| |||||  |||||||||| |||||||    
T  6324 aaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaggatatgaa-attgaagaccaatggttcctagaagatttttgaagaaaatacaa 6420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 669 - 864
Target Start/End: Complemental strand, 228269 - 228076
Alignment:
Q  669 tttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaa 768  Q
    |||||||||||||||  ||| ||||||||  |||||||||||||||  |||||| |||||||||  || | | | ||||| |  || ||| |||||||||    
T  228269 tttgtggaacattttaaattgttttcattcgagtcgttgtaattcatttttatcataaatcatgcaaccctaaaagtgttgtatgt-tttatagtgagaa 228171  T
Q  769 atcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||||||||||||   ||| |||||||||||||| |||||| ||| ||| ||||||||||| ||||||||||||||| || |||||||| |||||||    
T  228170 atcatgtaaatcgacaaatcaagacatcacgtgaaggatcgagtgtatgaatattgaaga-caatggttcttagaaggtatttgaagacaatacaa 228076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 662 - 864
Target Start/End: Complemental strand, 11789 - 11587
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    |||||| ||||  |||| ||||||||  ||||||||| | |||||||||||||  ||| ||||||||||||  ||| ||| |||||||||||||||||      
T  11789 tcaatgatttgatgaactttttgtatagttttcatttgaatcgttgtaattcagttttgtcctaaatcatgcaactacatgggtgttttgagtcttttcc 11690  T
Q  762 gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataata 861  Q
    ||  |||||||||||||||   |||||||||||||| ||  |||||  || || | || |||||| ||||||| |||||| || || |||||||| ||||    
T  11689 gtacgaaatcatgtaaatcgacaaaacaagacatcaagttaaggattgagaatttgaagattgaatatcaatgattcttataaggtatttgaagacaata 11590  T
Q  862 caa 864  Q
    |||    
T  11589 caa 11587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 662 - 827
Target Start/End: Original strand, 58768 - 58934
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtcttttta 761  Q
    ||||||||||| ||||| ||||||||| ||||||||   ||| ||||||| || ||||||||| |||||||  ||||  || || |||  ||||||||||    
T  58768 tcaatggtttgaggaactttttgtattgttttcattcgggtcattgtaatccaggtttatcctgaatcatgcaactctttatgtttttcaagtcttttta 58867  T
Q  762 gtgagaaatcatgtaaa-tcagtaaaacaagacatcacgtggaggatcaagtatatcaatattgaag 827  Q
    ||||||||||||||||| |  |||||||| |||||||| || |||||| || |||| || |||||||    
T  58868 gtgagaaatcatgtaaattgggtaaaacaggacatcacatgaaggatcgagaatatgaagattgaag 58934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 48; Significance: 7e-18; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 662 - 812
Target Start/End: Complemental strand, 13163 - 13012
Alignment:
Q  662 tcaatggtttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttt-t 760  Q
    |||||||||||||||  || ||||||| ||| ||    ||| |||| ||||||| |||||||||||| |||  |||||| ||||||||||||| |||| |    
T  13163 tcaatggtttgtggattatattgtattctttccacacgagttgttggaattcacttttatcctaaattatgcaactccacaggtgttttgagtgttttgt 13064  T
Q  761 agtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagt 812  Q
    |||||| |||||||||||||   ||| ||||||||||| || ||||||||||    
T  13063 agtgaggaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaagt 13012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 963 - 1004
Target Start/End: Complemental strand, 8269 - 8228
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattatttt 1004  Q
    ||||||||||||||||||||  ||||||||||||||| ||||    
T  8269 tcctcctcttgttctctctagtgtatgtttttctattgtttt 8228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 963 - 1004
Target Start/End: Complemental strand, 11299 - 11258
Alignment:
Q  963 tcctcctcttgttctctctatggtatgtttttctattatttt 1004  Q
    ||||||||||||||||||||  ||||||||||||||| ||||    
T  11299 tcctcctcttgttctctctagtgtatgtttttctattgtttt 11258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 723 - 864
Target Start/End: Original strand, 1892 - 2033
Alignment:
Q  723 ctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaata 821  Q
    ||||||||||  |||||||||||||||||||  |||| |||||||||||| |||||||||  ||| |||||||||||||| |||||  |  |||| || |    
T  1892 ctaaatcatgcaactccataggtgttttgagagttttgtagtgagaaatcctgtaaatcaacaaatcaagacatcacgtgaaggattgacgatatgaaga 1991  T
Q  822 ttgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    ||||||| |||||||| ||||||  ||| |||||| |||||||    
T  1992 ttgaaga-caatggttgttagaagttttatgaagaaaatacaa 2033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 723 - 864
Target Start/End: Original strand, 12328 - 12469
Alignment:
Q  723 ctaaatcatgagactccataggtgttttgagtctttt-tagtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaagtatatcaata 821  Q
    ||||||||||  |||||||||||||||||||| |||| |||||||||||||||||||||   ||| |||||||||||||| |||||  |  |||| || |    
T  12328 ctaaatcatgcaactccataggtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggattgacgatatgaaga 12427  T
Q  822 ttgaagatcaatggttcttagaaagtttttgaagataatacaa 864  Q
    | ||||| |||||||| ||||||  ||| |||||| |||||||    
T  12428 tcgaaga-caatggttgttagaagttttatgaagaaaatacaa 12469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 15241 - 15136
Alignment:
Q  402 atttaagcttaacatttgtaacctaac-agacagttt-ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttc 499  Q
    |||||||||||||| ||||| |||||  |||  |||| ||||||||||||||||||||||  ||||| ||||||||| |||| ||||||||||||||||     
T  15241 atttaagcttaacaattgtagcctaaggagaacgtttattcattcaataatattttagaggattttctcaatttctggtggattctagaaccctattttt 15142  T
Q  500 acaagt 505  Q
    ||||||    
T  15141 acaagt 15136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 438 - 508
Target Start/End: Original strand, 9652 - 9722
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttcacaagtgtt 508  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| |   ||||||||||||||||||||||    
T  9652 ttcattcaataatatttcagagagttttctcaatttctggtggatttcggaaccctattttcacaagtgtt 9722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 735 - 811
Target Start/End: Original strand, 447072 - 447149
Alignment:
Q  735 actccataggtgttttgagtcttttta-gtgagaaatcatgtaaatcagtaaaacaagacatcacgtggaggatcaag 811  Q
    |||||||||| ||||||||| |||| | ||||| |||||||||||||| |||| |||||||||| ||| |||||||||    
T  447072 actccataggcgttttgagtgttttgaagtgaggaatcatgtaaatcattaaatcaagacatcatgtgaaggatcaag 447149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 680 - 807
Target Start/End: Complemental strand, 1907 - 1780
Alignment:
Q  680 ttttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaat 779  Q
    ||||||||| |||||||| ||||| |||||||  |  |||||||||||| |||  |||   |||||  ||||| ||||||||||||||||||||| ||||    
T  1907 ttttgtattgttttcattctagtcattgtaatctagttttatcctaaattatgcaactttgtaggttatttgaatctttttagtgagaaatcatggaaat 1808  T
Q  780 cagtaaaacaagacatcacgtggaggat 807  Q
      | ||||||||| |||| ||| |||||    
T  1807 tggcaaaacaagagatcatgtgaaggat 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 669 - 798
Target Start/End: Original strand, 1473 - 1602
Alignment:
Q  669 tttgtggaacattttgtattattttcattttagtcgttgtaattcacgtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaa 768  Q
    |||| ||| ||||||||||| ||||||||  | || || |||||||| |||||| | |||||||  |||| | || ||||| ||||||||||  ||| ||    
T  1473 tttgaggagcattttgtattgttttcattcgattcattttaattcacttttatcattaatcatgcaactcaaaagatgtttcgagtcttttttatgaaaa 1572  T
Q  769 atcatgtaaatcagtaaaacaagacatcac 798  Q
    |||||||||||| | |||||| || |||||    
T  1573 atcatgtaaatcggaaaaacatgaaatcac 1602  T

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Target: scaffold0282 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 782 - 890
Target Start/End: Complemental strand, 22584 - 22477
Alignment:
Q  782 gtaaaacaagacatcacgtggaggatcaagtatatcaatattgaagatcaatggttcttagaaagtttttgaagataatacaagtcgggaaaaattcatc 881  Q
    ||||| |||||||||||||| || |||||| |||| || | ||||| |||||||||| ||||| |||||| |||| ||||||||  |   |||||||||     
T  22584 gtaaatcaagacatcacgtgaagaatcaaggatatgaagaatgaag-tcaatggttcatagaaggttttttaagacaatacaaggtgaagaaaattcatt 22486  T
Q  882 tcaagttcc 890  Q
    |||||||||    
T  22485 tcaagttcc 22477  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 504
Target Start/End: Original strand, 145683 - 145750
Alignment:
Q  438 ttcattcaataatattttagagagtttt-cacaatttctgctggactctagaaccctattttcacaag 504  Q
    ||||||||||||||||||||| | |||| | |||||| || |||| |||||||||||||||| |||||    
T  145683 ttcattcaataatattttagataatttttctcaatttttggtggattctagaaccctatttttacaag 145750  T

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Target: scaffold0240 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 438 - 500
Target Start/End: Original strand, 15997 - 16059
Alignment:
Q  438 ttcattcaataatattttagagagttttcacaatttctgctggactctagaaccctattttca 500  Q
    ||||||||||||||||||| |||||||||  |||||||| |||| |||| ||  |||||||||    
T  15997 ttcattcaataatattttatagagttttctaaatttctggtggattctataatactattttca 16059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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