View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1798_low_30 (Length: 322)
Name: NF1798_low_30
Description: NF1798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1798_low_30 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 20)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 57 - 306
Target Start/End: Original strand, 5174581 - 5174830
Alignment:
| Q |
57 |
atattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaatt |
156 |
Q |
| |
|
|||||||||| || |||| || |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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|
| T |
5174581 |
atattgttgacaaagtttcacgttttattgacaagacagacttgtttgttgctgataatccggtgggactcgaatctcgagtgcaagatatgattcaatt |
5174680 |
T |
|
| Q |
157 |
gctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatc |
256 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
5174681 |
gctagacatccaacaatctaatgatgttctactgatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatc |
5174780 |
T |
|
| Q |
257 |
ggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5174781 |
ggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
5174830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 57 - 306
Target Start/End: Original strand, 5276420 - 5276669
Alignment:
| Q |
57 |
atattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaatt |
156 |
Q |
| |
|
|||||||||| || |||| | |||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |
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|
| T |
5276420 |
atattgttgacaaagtttcatgttttattgacaagacatgcttgtttgttgctgataatccagtgggactcaaatctcgagtgcaagatatgattccatt |
5276519 |
T |
|
| Q |
157 |
gctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatc |
256 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
5276520 |
gctagacatccaacaatctaatgatgttctactggtagggatgtggggtatgggacgtattggtaaaactaccttagccaaagatattttcaacaaaatc |
5276619 |
T |
|
| Q |
257 |
ggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5276620 |
ggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
5276669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 43 - 306
Target Start/End: Complemental strand, 5184253 - 5183990
Alignment:
| Q |
43 |
tgaggcaaccaaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaa |
142 |
Q |
| |
|
|||||||| ||| || ||||||||||||||| |||||| || | ||||||||| ||||| |||| |||||||| |||||| ||||||||||||| | | |
|
|
| T |
5184253 |
tgaggcaatcaaagacattgttgaaaatgttacacatttgctaggcaagacagatttgttcattgcggataatccggtgggagtcgaatctcgagtacga |
5184154 |
T |
|
| Q |
143 |
gatatgattcaattgctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagata |
242 |
Q |
| |
|
||| |||||||||||||||||||||||| ||| |||| |||| |||| ||||||| |||||||||||||||||||||||||| || ||||||||| | |
|
|
| T |
5184153 |
gatgtgattcaattgctagacatccaacgatcaaatggtgttatactactagggatctggggtatgggaggtattggtaaaacaacgttagccaaatcca |
5184054 |
T |
|
| Q |
243 |
ttttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
||| ||| |||| ||||| |||||||| |||||||||||| || | ||||||||||||||||| |
|
|
| T |
5184053 |
tttacaatgaaattggtcgcaattttgagggtaggagcttccttgcaaatattagggaagtttg |
5183990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 54 - 312
Target Start/End: Complemental strand, 5069367 - 5069103
Alignment:
| Q |
54 |
aggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattca |
153 |
Q |
| |
|
|||||||||||||||||||| | | ||||||||| ||||||||||| ||||| |||||||||||||| | |||||||||||||| ||||||||||| |
|
|
| T |
5069367 |
aggatattgttgaaaatgttacgcgtaagcttgacaaggcagacttgtttattgctaataatccagtgggagttgaatctcgagtgcaggatatgattca |
5069268 |
T |
|
| Q |
154 |
attgctagac------atccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttc |
247 |
Q |
| |
|
| |||| ||| ||||||| ||| ||||||||||| ||| |||||||||||||||||||||| |||||||||| ||| | ||||||| ||||| | |
|
|
| T |
5069267 |
actgctggaccaagatatccaactatcaaatgatgttctccttctagggatgtggggtatgggaggagttggtaaaacgaccattgccaaagctatttac |
5069168 |
T |
|
| Q |
248 |
aacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgtgatga |
312 |
Q |
| |
|
|| ||||| || || |||||||||||||| |||||| || | ||||||||||||||||| ||||| |
|
|
| T |
5069167 |
aataaaattggccgcaattttgaaggtagaagcttccttgcaaatattagggaagtttgggatga |
5069103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 52 - 306
Target Start/End: Complemental strand, 5105170 - 5104910
Alignment:
| Q |
52 |
caaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgatt |
151 |
Q |
| |
|
||||||||||||| | ||||| ||||| |||||||||||||| |||||| ||||| ||||||| |||||| | ||||||||||| |||||||||||| |
|
|
| T |
5105170 |
caaggatattgttaacaatgtaacgcatttgcttgacaagacagatttgtttattgctaataatccggtgggagttgaatctcgagttcaagatatgatt |
5105071 |
T |
|
| Q |
152 |
caattgctagac------atccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattt |
245 |
Q |
| |
|
||| |||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||| ||| | ||||||| ||||| |
|
|
| T |
5105070 |
caactgctagaccaagatatccaacaatcaaatgatgttctcctactagggatgtggggtatgggaggagttggtaaaacaaccattgccaaagctattt |
5104971 |
T |
|
| Q |
246 |
tcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
||| ||||| || | ||||||||| ||||| |||||| || | ||||||||||||||||| |
|
|
| T |
5104970 |
acaataaaattggccataattttgatggtagaagcttccttgcaaatattagggaagtttg |
5104910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 303
Target Start/End: Original strand, 5394760 - 5395004
Alignment:
| Q |
59 |
attgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgc |
158 |
Q |
| |
|
|||||||||||| ||| || ||| |||||||| |||||||||||| ||||| || |||||||||| | |||||||| || | |||| ||||||| |||| |
|
|
| T |
5394760 |
attgttgaaaatatttcacgtttgcttgacaaaacagacttgtttattgctaattatccagtgggcgtggaatctcgggtacgagatgtgattcagttgc |
5394859 |
T |
|
| Q |
159 |
tagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcgg |
258 |
Q |
| |
|
||||||| || | | | ||||||||| |||| ||||||| |||||||||||||||||||||||||| ||||||||||||| || | ||||| ||| || |
|
|
| T |
5394860 |
tagacatacagcgacccaatgatgttgtactactagggatatggggtatgggaggtattggtaaaaccaccttagccaaagccatatacaacagaattgg |
5394959 |
T |
|
| Q |
259 |
tcgtaattttgaaggtaggagcttcattcccaatattagggaagt |
303 |
Q |
| |
|
||| |||||||| |||||||||||| || | |||||||||||||| |
|
|
| T |
5394960 |
tcgcaattttgagggtaggagcttccttgcaaatattagggaagt |
5395004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 54 - 306
Target Start/End: Original strand, 5368166 - 5368424
Alignment:
| Q |
54 |
aggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattca |
153 |
Q |
| |
|
|||||||||||||||||||| | | |||||||||||||| |||||| |||||||||||||||||||| | |||||||||||||||| ||||||||| |
|
|
| T |
5368166 |
aggatattgttgaaaatgttacgcgtaagcttgacaagacagaattgtttattgctgataatccagtgggagttgaatctcgagtgcaaggtatgattca |
5368265 |
T |
|
| Q |
154 |
att------gctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttc |
247 |
Q |
| |
|
| | || ||| ||||||||||| ||||||||||| || | ||||||||||||||||| || |||||||||| ||| | ||||||| ||||| | |
|
|
| T |
5368266 |
actaatggagcaagatatccaacaatcaaatgatgttcttctactggggatgtggggtatggggggagttggtaaaacaaccattgccaaagctatttac |
5368365 |
T |
|
| Q |
248 |
aacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
|| ||||| || || |||||||||||||| |||||| || | ||||||||||||||||| |
|
|
| T |
5368366 |
aataaaattggccgcaattttgaaggtagaagcttccttgcaaatattagggaagtttg |
5368424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 53 - 306
Target Start/End: Original strand, 5423458 - 5423717
Alignment:
| Q |
53 |
aaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattc |
152 |
Q |
| |
|
||||||||||||||||||||| | | |||||||||||||| |||||| ||||| ||||||| |||||| | ||||||||||||||||||||||||| |
|
|
| T |
5423458 |
aaggatattgttgaaaatgttacgcgtaagcttgacaagacagatttgtttattgctaataatcctgtgggagttgaatctcgagtgcaagatatgattc |
5423557 |
T |
|
| Q |
153 |
aattgctagac------atccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatatttt |
246 |
Q |
| |
|
|| |||| ||| || ||||||| || ||||||| || ||||||||||||||||||| || |||||||||| ||| | ||||||| ||||| |
|
|
| T |
5423558 |
aactgctggaccaagatataaaacaatcagataatgttcttctactagggatgtggggtatggggggagttggtaaaacaaccattgccaaagctattta |
5423657 |
T |
|
| Q |
247 |
caacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
||| ||||| ||||| |||||||||||||| |||||| || | ||||||||||||||||| |
|
|
| T |
5423658 |
caataaaattggtcgcaattttgaaggtagaagcttccttgcaaatattagggaagtttg |
5423717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 56 - 306
Target Start/End: Complemental strand, 5076019 - 5075769
Alignment:
| Q |
56 |
gatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaat |
155 |
Q |
| |
|
||||| || |||||| ||| || ||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
5076019 |
gatatagtggaaaatatttcacgtttgcttgacaagacagatttgttcattgctgataatccagtgggagtcgaatctcgagtagaagatatgattcaac |
5075920 |
T |
|
| Q |
156 |
tgctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaat |
255 |
Q |
| |
|
| || ||||||||||| | ||||| | |||| ||||||| ||||||||||| || ||||||||||| ||| | || |||| |||| ||| ||||| |
|
|
| T |
5075919 |
ggttaaacatccaacaaaccaatgaaaatgtactactagggatttggggtatgggtgggattggtaaaaccaccattgcaaaagccatttacaataaaat |
5075820 |
T |
|
| Q |
256 |
cggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
|||||||| |||| ||||||||||||| || | ||||| ||||||||||| |
|
|
| T |
5075819 |
tggtcgtaaatttgcaggtaggagcttccttgcaaatatcagggaagtttg |
5075769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 306
Target Start/End: Original strand, 5341439 - 5341658
Alignment:
| Q |
87 |
acaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttct |
186 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||| | ||||| ||| ||||||||||||||||| |||| || ||||||||||| |||||| |||| |
|
|
| T |
5341439 |
acaagacagacttgtttgttgttgataatccagcgggggttgaatcccgattgcaagatatgattcaactgcttgatatccaacaatcaaatgatattct |
5341538 |
T |
|
| Q |
187 |
acttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcatt |
286 |
Q |
| |
|
||| |||||||||||||||||||||| |||||||| |||||| | | |||| |||| || ||| | || | || |||||||||||||| ||| || |
|
|
| T |
5341539 |
actattagggatgtggggtatgggaggaattggtaagactaccattgtgaaagccatttataataaacttggccacaactttgaaggtaggagtttcctt |
5341638 |
T |
|
| Q |
287 |
cccaatattagggaagtttg |
306 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
5341639 |
gcaaatattagggaagtttg |
5341658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 83 - 306
Target Start/End: Complemental strand, 5134172 - 5133943
Alignment:
| Q |
83 |
cttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagaca------tccaacaatcta |
176 |
Q |
| |
|
|||||||| | ||| |||||| ||||| |||||||||||||| | |||||||| ||| ||||||||||||||||||||||| | ||||||| | |
|
|
| T |
5134172 |
cttgacaaaatagatttgtttattgctaataatccagtgggagttgaatctcgtatgctagatatgattcaattgctagacaaagatattgaacaatcaa |
5134073 |
T |
|
| Q |
177 |
atgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtag |
276 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||||| |||||||||| ||| | || |||| |||| ||| ||||| || || ||||||||||||| |
|
|
| T |
5134072 |
atgatgttatacttctagggatgtggggtatgggaggcgttggtaaaacaaccattgcgaaagccatttacaataaaattggccgcgattttgaaggtag |
5133973 |
T |
|
| Q |
277 |
gagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
||||||| || | ||||||||||||||||| |
|
|
| T |
5133972 |
gagcttccttgcaaatattagggaagtttg |
5133943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 57 - 312
Target Start/End: Original strand, 5348120 - 5348381
Alignment:
| Q |
57 |
atattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaatt |
156 |
Q |
| |
|
||||||||||||||||| | ||| ||| ||||| |||| || ||| ||||| |||||||||||||| | |||||| || |||| |||||||||||| | |
|
|
| T |
5348120 |
atattgttgaaaatgttatgcataggcttaacaaggcagatttatttattgctaataatccagtgggagttgaatctagattgcaggatatgattcaact |
5348219 |
T |
|
| Q |
157 |
gctagac------atccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaac |
250 |
Q |
| |
|
|| ||| || |||||||| ||||||||||| || |||||||||||||||||||||| |||||||||| ||| | ||||||| ||||| ||| |
|
|
| T |
5348220 |
actggaccaagatatacaacaatcaaatgatgttctcctactagggatgtggggtatgggaggagttggtaaaacgaccattgccaaagctatttacaat |
5348319 |
T |
|
| Q |
251 |
aaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgtgatga |
312 |
Q |
| |
|
||||| || || |||||||||||||| |||||| || | ||||||||||||||||| ||||| |
|
|
| T |
5348320 |
aaaattggccgcaattttgaaggtagaagcttccttgcaaatattagggaagtttgggatga |
5348381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 52 - 306
Target Start/End: Complemental strand, 5356914 - 5356654
Alignment:
| Q |
52 |
caaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgatt |
151 |
Q |
| |
|
||||||||||||| ||||| || || ||| ||||||||||||||||| ||||||||| ||||||| |||||| | |||||||| ||||||||||||||| |
|
|
| T |
5356914 |
caaggatattgttaaaaatattacacgtttgcttgacaagacagacttatttgttgctaataatccggtgggagttgaatctcgtgtgcaagatatgatt |
5356815 |
T |
|
| Q |
152 |
caattgct------agacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattt |
245 |
Q |
| |
|
| |||| ||| ||||||||||| ||||||||| | ||| |||||||||||||||||||||| |||| ||||| ||| | | |||| ||||| |
|
|
| T |
5356814 |
aagctgctagaacaagatatccaacaatcaaatgatgttttccttctagggatgtggggtatgggaggagttggcaaaacaaccatcggaaaagctattt |
5356715 |
T |
|
| Q |
246 |
tcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
||| ||||| || || ||||||| ||||| |||||| || | ||||||||||||||||| |
|
|
| T |
5356714 |
acaataaaattggccgcgattttgatggtagaagcttccttgcaaatattagggaagtttg |
5356654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 312
Target Start/End: Original strand, 5093751 - 5094011
Alignment:
| Q |
52 |
caaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgatt |
151 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||| |||||||| ||||| |||||||||| || |||||| | | ||||||||||||||| | ||| |
|
|
| T |
5093751 |
caaggatattgttgaaaaaattactcatttgcttgataagacagatttgttcattgctgataaacctgtgggagttggttctcgagtgcaagatgttatt |
5093850 |
T |
|
| Q |
152 |
caattgctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaaca |
251 |
Q |
| |
|
|| || |||||||||||||||| |||||||| || || | ||||||||||||||||| || ||||||||||| ||| | || |||| ||| | || |
|
|
| T |
5093851 |
gaactgttagacatccaacaatcaaatgatgtactgctacttgggatgtggggtatgggggggattggtaaaacaaccattgcaaaagctatctataatg |
5093950 |
T |
|
| Q |
252 |
aaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgtgatga |
312 |
Q |
| |
|
|||| || |||||||||||||||||||||||| || | ||| ||||||||||||| ||||| |
|
|
| T |
5093951 |
aaattggccgtaattttgaaggtaggagcttccttgcaaatgttagggaagtttgggatga |
5094011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 312
Target Start/End: Complemental strand, 5159793 - 5159533
Alignment:
| Q |
52 |
caaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgatt |
151 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||| |||||||| ||||| ||||||||||||| |||||| | | ||||||||||||||| | ||| |
|
|
| T |
5159793 |
caaggatattgttgaaaaaattactcatttgcttgataagacagatttgttcattgctgataatcctgtgggagttggttctcgagtgcaagatgttatt |
5159694 |
T |
|
| Q |
152 |
caattgctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaaca |
251 |
Q |
| |
|
|| |||||||||||||||| || |||||||| || || | ||||||||||||||||| || ||||| ||||| ||| | || |||| ||| | || |
|
|
| T |
5159693 |
gaactgctagacatccaacactccaatgatgtactgctacttgggatgtggggtatgggggggattggcaaaacaaccattgcaaaagctatctataatg |
5159594 |
T |
|
| Q |
252 |
aaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttgtgatga |
312 |
Q |
| |
|
|||| || |||||||||||||||||||||||| || | ||| ||||||||||||| ||||| |
|
|
| T |
5159593 |
aaattggccgtaattttgaaggtaggagcttccttgcaaatgttagggaagtttgggatga |
5159533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 5149249 - 5149087
Alignment:
| Q |
57 |
atattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaatt |
156 |
Q |
| |
|
||||||||||||| ||| || || || |||||||| |||||||| |||||| |||||||||| ||| | ||| ||||||| ||||||||||||||| | |
|
|
| T |
5149249 |
atattgttgaaaaagttactcacttgctagacaagaccgacttgttcgttgctcataatccagtcggagttgaaactcgagtacaagatatgattcaact |
5149150 |
T |
|
| Q |
157 |
gctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattgg |
219 |
Q |
| |
|
||||||||||||| |||| |||||||| ||| | |||| |||||||||||||| || ||||| |
|
|
| T |
5149149 |
gctagacatccaaaaatcaaatgatgtactattactaggaatgtggggtatggggggaattgg |
5149087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 160 - 306
Target Start/End: Complemental strand, 5692295 - 5692149
Alignment:
| Q |
160 |
agacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggt |
259 |
Q |
| |
|
||||||||||||||||||| |||||| ||| |||||||||||||| |||||||| ||||| ||||| ||| | || |||| |||| ||| ||||| || |
|
|
| T |
5692295 |
agacatccaacaatctaataatgttcgactaatagggatgtggggcatgggaggaattggcaaaaccaccattgcaaaagccatttacaataaaattggc |
5692196 |
T |
|
| Q |
260 |
cgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
|| ||||||||||| ||||||||| || | ||||| ||||||||||| |
|
|
| T |
5692195 |
cgcaattttgaaggaaggagcttccttgcaaatataagggaagtttg |
5692149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 210
Target Start/End: Original strand, 5431142 - 5431275
Alignment:
| Q |
77 |
cattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatcta |
176 |
Q |
| |
|
||||| |||||||||| |||| |||| |||||||||| ||||||||| | || |||||| |||||||| | |||||| |||||||||||||||||| | |
|
|
| T |
5431142 |
catttgcttgacaagaaagacatgttcattgctgataagccagtgggaattgattctcgaatgcaagatgttattcaacggctagacatccaacaatcaa |
5431241 |
T |
|
| Q |
177 |
atgatgttctacttatagggatgtggggtatggg |
210 |
Q |
| |
|
||| ||| |||| | ||||||||||||||||| |
|
|
| T |
5431242 |
atggtgtaatactacttgggatgtggggtatggg |
5431275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 170
Target Start/End: Original strand, 5444802 - 5444914
Alignment:
| Q |
58 |
tattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattg |
157 |
Q |
| |
|
||||||||| || ||| |||||| ||| |||| |||||||||||| |||| |||||||||||||| | |||||||||||| ||||| |||||||| | |
|
|
| T |
5444802 |
tattgttgacaacatttcacatttgcttaacaaaacagacttgtttattgcgaataatccagtgggaattgaatctcgagtgaaagatgtgattcaacag |
5444901 |
T |
|
| Q |
158 |
ctagacatccaac |
170 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
5444902 |
ctacacatccaac |
5444914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 162
Target Start/End: Complemental strand, 5692539 - 5692407
Alignment:
| Q |
30 |
ataggaacgaatttgaggcaaccaaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcga |
129 |
Q |
| |
|
||||||||||| |||||| | || |||||||| |||| ||| | | ||| || ||||||| |||||||||||||||| || || |||||||| | || |
|
|
| T |
5692539 |
ataggaacgaaagtgaggctataaaagatattgtcaaaaaagttgtgcgtttgctagacaagaaagacttgtttgttgctaatcattcagtgggagttga |
5692440 |
T |
|
| Q |
130 |
atctcgagtgcaagatatgattcaattgctaga |
162 |
Q |
| |
|
| ||||||||||||||||||| |||||| |||| |
|
|
| T |
5692439 |
acctcgagtgcaagatatgatgcaattgttaga |
5692407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 109; Significance: 8e-55; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 30 - 282
Target Start/End: Complemental strand, 4126751 - 4126499
Alignment:
| Q |
30 |
ataggaacgaatttgaggcaaccaaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcga |
129 |
Q |
| |
|
|||||||||||| ||||| | |||||||||||||||||||||| | |||| |||||||||||||||||||| ||||||||||||| || ||| |||| |
|
|
| T |
4126751 |
ataggaacgaatgtgaggttatcaaggatattgttgaaaatgttacaaatttgcttgacaagacagacttgttcattgctgataatcctgtcggagtcga |
4126652 |
T |
|
| Q |
130 |
atctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactacc |
229 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||| ||||| || |||||||||||||| | ||||||||||| ||||| || ||||||||||| ||| |
|
|
| T |
4126651 |
atctcgagtgcaagatatgattcaacttctagacactcaacagtcaaatgatgttctactgctggggatgtgggggatgggtggaattggtaaaaccacc |
4126552 |
T |
|
| Q |
230 |
ttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagctt |
282 |
Q |
| |
|
| || |||| |||| ||| ||||| || || |||||||||||||||||||| |
|
|
| T |
4126551 |
attgcaaaagccatttacaataaaattggccggaattttgaaggtaggagctt |
4126499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 31 - 306
Target Start/End: Complemental strand, 4323415 - 4323140
Alignment:
| Q |
31 |
taggaacgaatttgaggcaaccaaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaa |
130 |
Q |
| |
|
|||||||||| ||||| | |||||||||||||||||||||| || ||| || ||||||||||||||||| |||||||||||||| ||||| |||| |
|
|
| T |
4323415 |
taggaacgaaagtgaggttatcaaggatattgttgaaaatgttacacgtttactggacaagacagacttgttcgttgctgataatcctgtgggtatcgat |
4323316 |
T |
|
| Q |
131 |
tctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactacct |
230 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||| |||||| | |||||||||||||| ||||||||||||| ||||| || ||||| ||||| ||| |
|
|
| T |
4323315 |
tctcgagtgcaagatatgattcaacttctagacactcaacaaacaaatgatgttctactactagggatgtgggggatgggtggaattggaaaaaccaccg |
4323216 |
T |
|
| Q |
231 |
tagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
| || || | |||| ||| ||||| ||||| |||||||||||||||||||| ||| | ||||||||||| ||||| |
|
|
| T |
4323215 |
ttgcaaaggccatttacaataaaattggtcgcaattttgaaggtaggagctttattgcaaatattagggaggtttg |
4323140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 56 - 306
Target Start/End: Original strand, 4342656 - 4342906
Alignment:
| Q |
56 |
gatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaat |
155 |
Q |
| |
|
|||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||| |||| || ||| |||| |||||||||||||||||||||||| |
|
|
| T |
4342656 |
gatattgttgaaaatgttatacgtttgcttgacaagacagacttgttcattgctgattatccggtcggagtcgattctcgagtgcaagatatgattcaac |
4342755 |
T |
|
| Q |
156 |
tgctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaat |
255 |
Q |
| |
|
| |||||| |||||||| |||||||||||||| ||||||||||||| ||||| || || || ||||| ||| | || |||| |||| ||| ||||| |
|
|
| T |
4342756 |
ttatagacactcaacaatcaaatgatgttctactactagggatgtgggggatgggtggaatggggaaaaccaccattgcaaaagccatttacaataaaat |
4342855 |
T |
|
| Q |
256 |
cggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
||||| |||||||||| |||||||| || | ||||||||||| ||||| |
|
|
| T |
4342856 |
tggtcgcaattttgaagccaggagctttcttgcaaatattagggaggtttg |
4342906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 55 - 282
Target Start/End: Original strand, 4358123 - 4358350
Alignment:
| Q |
55 |
ggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaa |
154 |
Q |
| |
|
||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||||||||||||||| |
|
|
| T |
4358123 |
ggatattgttgaaaatgttactcgtttgcttgacaagacagacttgttcattgctgataatccagtaggagtcgattctcgagtgcaagatatgattcaa |
4358222 |
T |
|
| Q |
155 |
ttgctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaa |
254 |
Q |
| |
|
| ||||| | |||||||| || |||| |||||| ||||||||||||| ||||| || || || ||||| ||| | || ||| |||| ||| |||| |
|
|
| T |
4358223 |
ctcctagaaactcaacaatcaaacgatgctctactactagggatgtgggggatgggtggaatcggaaaaaccaccattgcaaaatccatttacaataaaa |
4358322 |
T |
|
| Q |
255 |
tcggtcgtaattttgaaggtaggagctt |
282 |
Q |
| |
|
| ||||| |||||||||||||||||||| |
|
|
| T |
4358323 |
ttggtcgcaattttgaaggtaggagctt |
4358350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 225
Target Start/End: Complemental strand, 4135858 - 4135663
Alignment:
| Q |
30 |
ataggaacgaatttgaggcaaccaaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcga |
129 |
Q |
| |
|
||||||||||| ||||| | |||||||||||||||||| ||| |||||| ||||||||||||||| |||| ||||||| ||||||| || |||| |
|
|
| T |
4135858 |
ataggaacgaaagtgaggatatcaaggatattgttgaaaaagttacacatttgcttgacaagacagacctgttcattgctgaccatccagttagagtcga |
4135759 |
T |
|
| Q |
130 |
atctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaac |
225 |
Q |
| |
|
||||||||||| ||||||||||||| | || |||| | | || |||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
4135758 |
atctcgagtgctagatatgattcaactactggacactccattttcaaatgatgttctactactagggatgtggggtatggaaggtattggtaaaac |
4135663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 30 - 306
Target Start/End: Original strand, 4333240 - 4333516
Alignment:
| Q |
30 |
ataggaacgaatttgaggcaaccaaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcga |
129 |
Q |
| |
|
||||||||||| ||||| | |||||||||||||||||||||| || ||| ||||||||||| |||||||| |||||||| |||| || ||| |||| |
|
|
| T |
4333240 |
ataggaacgaaagtgaggtcatcaaggatattgttgaaaatgttgcacgtttgcttgacaagactgacttgttcattgctgatcatccggtaggagtcga |
4333339 |
T |
|
| Q |
130 |
atctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactacc |
229 |
Q |
| |
|
||||||||| ||||||||||||||| | ||||||| |||| ||| ||| | |||||||| |||| |||||||| ||||| || ||||| ||||| || |
|
|
| T |
4333340 |
atctcgagtacaagatatgattcaacttctagacactcaactatcaaataaagttctactgctaggaatgtgggggatgggtgggattgggaaaaccaca |
4333439 |
T |
|
| Q |
230 |
ttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
| || || | |||| ||| ||||| || || || ||| ||||||||||||| || | ||||||||||| ||||| |
|
|
| T |
4333440 |
attgcgaaggccatttacaataaaattggccgcaaatttcaaggtaggagctttcttgcaaatattagggaggtttg |
4333516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 52 - 300
Target Start/End: Original strand, 4350941 - 4351189
Alignment:
| Q |
52 |
caaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgatt |
151 |
Q |
| |
|
||||| ||||||||||||| || || ||| ||||||||| |||||| || ||| ||||||||| |||||| ||||||||| ||||||||||||||| |
|
|
| T |
4350941 |
caagggtattgttgaaaatattacacgtttgtttgacaagatagacttattcattgttgataatcctgtgggagtcgaatctcaggtgcaagatatgatt |
4351040 |
T |
|
| Q |
152 |
caattgctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaaca |
251 |
Q |
| |
|
|| | ||||||| || ||||| || ||||||||||| |||||||||||||| ||||| || || || ||| | ||| | || |||| |||| ||| | |
|
|
| T |
4351041 |
aaacttctagacactcaccaatcaaaagatgttctactaatagggatgtgggggatgggtggaatcggcaaatccaccgttgcaaaagccatttacaata |
4351140 |
T |
|
| Q |
252 |
aaatcggtcgtaattttgaaggtaggagcttcattcccaatattaggga |
300 |
Q |
| |
|
|||| || || ||||||||||||||||| || || | ||||||||||| |
|
|
| T |
4351141 |
aaattggccgcaattttgaaggtaggagttttcttgcaaatattaggga |
4351189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 306
Target Start/End: Original strand, 4330196 - 4330453
Alignment:
| Q |
52 |
caaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgatt |
151 |
Q |
| |
|
|||| ||||||||||||||||| || ||||||||| |||| |||||| || ||||||||||||| |||| | | ||||||||||| |||| |||||| |
|
|
| T |
4330196 |
caagaatattgttgaaaatgttacactttttcttgataagatagacttattcattgctgataatccggtggaaattaaatctcgagtgtaagagatgatt |
4330295 |
T |
|
| Q |
152 |
caattgctagaca-tc--caacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttca |
248 |
Q |
| |
|
||| | ||||||| || |||||||| |||||||||||||| ||| ||||||||| | ||| || || || |||| ||| | || || | |||| | |
|
|
| T |
4330296 |
caacttctagacactcatcaacaatcaaatgatgttctactcttagagatgtgggggacgggtggaatcggcaaaatcaccattgcaaaggccatttata |
4330395 |
T |
|
| Q |
249 |
acaaaatcggtcgtaattttgaaggtaggagcttcattcccaatattagggaagtttg |
306 |
Q |
| |
|
| ||||| || || |||||||||||||||||||| || | ||||||||||| ||||| |
|
|
| T |
4330396 |
ataaaattggccgcaattttgaaggtaggagctttcttgcaaatattagggaggtttg |
4330453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 25567624 - 25567744
Alignment:
| Q |
43 |
tgaggcaaccaaggatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaa |
142 |
Q |
| |
|
|||||| | |||||||||||||||||| | | | ||| || ||||||||| ||||| |||||||| |||||||||||||| | ||| |||||||| || |
|
|
| T |
25567624 |
tgaggctatcaaggatattgttgaaaaaatcgtgcgtttgctagacaagacacacttgcttgttgctaataatccagtgggagttgaacctcgagtggaa |
25567723 |
T |
|
| Q |
143 |
gatatgattcaattgctagac |
163 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
25567724 |
aatatgattcaactgctagac |
25567744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 25567811 - 25567886
Alignment:
| Q |
150 |
ttcaattgctagacatccaacaatctaatgatgttctacttatagggatgtggggtatgggaggtattggtaaaac |
225 |
Q |
| |
|
|||||||| ||||| |||| |||| || |||||||||||| |||||||||||||||||||||| ||||| ||||| |
|
|
| T |
25567811 |
ttcaattgatagactaccaagaatcaaaagatgttctacttctagggatgtggggtatgggagggattggcaaaac |
25567886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 225
Target Start/End: Complemental strand, 10926 - 10784
Alignment:
| Q |
83 |
cttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattcaattgctagacatccaacaatctaatgatg |
182 |
Q |
| |
|
||||||||||||||||| || |||| ||||||||| |||||| || ||||||||||| | | | ||||| |||||| | || |||||||| ||||||| |
|
|
| T |
10926 |
cttgacaagacagacttattcgttgttgataatccggtgggagtcaaatctcgagtggacaaaacgattccgttgctaaaaattcaacaatcaaatgatg |
10827 |
T |
|
| Q |
183 |
ttctacttatagggatgtggggtatgggaggtattggtaaaac |
225 |
Q |
| |
|
|||| || ||||||| ||||||||||| || ||||||||||| |
|
|
| T |
10826 |
ttctgctactagggatttggggtatggggggaattggtaaaac |
10784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 48015593 - 48015496
Alignment:
| Q |
56 |
gatattgttgaaaatgttttacattttcttgacaagacagacttgtttgttgctgataatccagtgggactcgaatctcgagtgcaagatatgattca |
153 |
Q |
| |
|
||||||||||||||| || || || ||||||||||||||||||||| ||||| ||||| ||||||| | |||||| |||||| |||||||||||| |
|
|
| T |
48015593 |
gatattgttgaaaatattacacgattgcttgacaagacagacttgtttattgctaataattcagtggggattgaatcttgagtgcgagatatgattca |
48015496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 22586467 - 22586353
Alignment:
| Q |
192 |
tagggatgtggggtatgggaggtattggtaaaactaccttagccaaagatattttcaacaaaatcggtcgtaattttgaaggtaggagcttcattcccaa |
291 |
Q |
| |
|
||||||||||||||||||| || |||| ||||| ||| | || |||| | ||| ||| || || || || | |||||||||||||||||| || | || |
|
|
| T |
22586467 |
tagggatgtggggtatggggggatttggcaaaacaaccattgcaaaagctgtttacaataagattggccgcgagtttgaaggtaggagcttccttgcaaa |
22586368 |
T |
|
| Q |
292 |
tattagggaagtttg |
306 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
22586367 |
tattagggaagtttg |
22586353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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