View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1798_low_39 (Length: 273)
Name: NF1798_low_39
Description: NF1798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1798_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 42240558 - 42240729
Alignment:
| Q |
1 |
tggtatatatctgcatatataaattgattgaatataagaaaagaggctgctttcgttggtggttggagttggtatagaaaatggttttgtataggagatg |
100 |
Q |
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| T |
42240558 |
tggtatatatctgcatatataaattgattgaatataagaaaagaggctgctttcgttggtggttggagttggtatagaaaatggttttgtataggagttg |
42240657 |
T |
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| Q |
101 |
agatggctccttcattgaagtaggtgactttcaaacattgaactaaaattagagaaagagttagtttggctg |
172 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42240658 |
agatggctccttcattgaagtaggtgactttcaaacattgaactaaaattagagaaagagttagtttggctg |
42240729 |
T |
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