View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1798_low_61 (Length: 231)

Name: NF1798_low_61
Description: NF1798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1798_low_61
NF1798_low_61
[»] chr5 (17 HSPs)
chr5 (16-213)||(38971159-38971356)
chr5 (16-209)||(42538915-42539101)
chr5 (61-213)||(511409-511562)
chr5 (16-159)||(15939813-15939956)
chr5 (61-192)||(5199905-5200036)
chr5 (61-213)||(40622792-40622944)
chr5 (85-192)||(8468-8575)
chr5 (85-212)||(42937467-42937594)
chr5 (91-192)||(38407662-38407763)
chr5 (85-192)||(8577344-8577451)
chr5 (91-192)||(28238544-28238645)
chr5 (16-88)||(36503413-36503485)
chr5 (93-192)||(7761688-7761787)
chr5 (85-192)||(28879743-28879850)
chr5 (93-192)||(30708192-30708291)
chr5 (85-192)||(19037968-19038075)
chr5 (87-122)||(8699237-8699272)
[»] chr1 (24 HSPs)
chr1 (17-213)||(38119901-38120098)
chr1 (19-213)||(11196980-11197171)
chr1 (61-197)||(45828709-45828845)
chr1 (87-209)||(47660994-47661116)
chr1 (90-213)||(23273217-23273340)
chr1 (70-199)||(51337036-51337165)
chr1 (62-192)||(22527139-22527269)
chr1 (88-192)||(94916-95020)
chr1 (85-199)||(19522092-19522206)
chr1 (70-192)||(47505485-47505607)
chr1 (78-199)||(35256210-35256331)
chr1 (85-192)||(19159165-19159272)
chr1 (85-192)||(13636805-13636912)
chr1 (91-178)||(21144088-21144175)
chr1 (91-192)||(26878854-26878955)
chr1 (85-213)||(31780472-31780600)
chr1 (85-192)||(52805012-52805119)
chr1 (91-192)||(3729154-3729255)
chr1 (90-169)||(8548257-8548336)
chr1 (85-186)||(50617697-50617798)
chr1 (85-144)||(470574-470633)
chr1 (82-157)||(49854822-49854897)
chr1 (17-67)||(23273168-23273218)
chr1 (76-153)||(16269590-16269667)
[»] chr3 (33 HSPs)
chr3 (16-213)||(42759761-42759958)
chr3 (16-213)||(11380774-11380971)
chr3 (70-213)||(20353659-20353802)
chr3 (61-213)||(6928243-6928395)
chr3 (76-208)||(44232834-44232966)
chr3 (61-194)||(48565957-48566090)
chr3 (76-192)||(41615394-41615510)
chr3 (70-192)||(16861562-16861684)
chr3 (82-203)||(48891645-48891766)
chr3 (85-192)||(52388414-52388521)
chr3 (85-192)||(4005215-4005322)
chr3 (85-192)||(16646640-16646747)
chr3 (85-192)||(9473421-9473528)
chr3 (85-192)||(47070987-47071095)
chr3 (85-192)||(2648377-2648484)
chr3 (85-192)||(36130615-36130722)
chr3 (91-192)||(34048570-34048671)
chr3 (91-192)||(42900967-42901068)
chr3 (91-192)||(46698122-46698223)
chr3 (91-192)||(49141337-49141438)
chr3 (91-192)||(54389270-54389371)
chr3 (92-192)||(49266177-49266277)
chr3 (114-197)||(599998-600081)
chr3 (70-145)||(42804750-42804825)
chr3 (85-192)||(46401850-46401957)
chr3 (91-177)||(50213974-50214060)
chr3 (91-192)||(50477584-50477685)
chr3 (16-155)||(18751920-18752059)
chr3 (87-157)||(30252898-30252968)
chr3 (113-186)||(17562171-17562244)
chr3 (85-192)||(2271857-2271964)
chr3 (94-146)||(26334789-26334841)
chr3 (26-88)||(12373946-12374008)
[»] chr7 (26 HSPs)
chr7 (16-213)||(37343368-37343565)
chr7 (16-209)||(41734850-41735043)
chr7 (84-199)||(16680591-16680706)
chr7 (84-199)||(17654827-17654942)
chr7 (70-192)||(47521767-47521889)
chr7 (70-212)||(16488492-16488634)
chr7 (70-212)||(36980665-36980807)
chr7 (91-199)||(34741850-34741958)
chr7 (85-192)||(5538356-5538463)
chr7 (124-208)||(11630143-11630227)
chr7 (91-199)||(19801632-19801740)
chr7 (70-192)||(27450481-27450600)
chr7 (85-192)||(17838098-17838205)
chr7 (91-192)||(48406503-48406604)
chr7 (85-192)||(15071088-15071195)
chr7 (91-192)||(9368213-9368314)
chr7 (76-157)||(9491787-9491868)
chr7 (91-192)||(17460073-17460174)
chr7 (91-192)||(17593040-17593141)
chr7 (91-192)||(35607202-35607303)
chr7 (91-192)||(41883685-41883786)
chr7 (70-157)||(47669996-47670083)
chr7 (91-192)||(10521975-10522076)
chr7 (90-192)||(13323178-13323280)
chr7 (19-65)||(11630078-11630124)
chr7 (134-192)||(42504788-42504846)
[»] chr8 (20 HSPs)
chr8 (16-213)||(5301061-5301258)
chr8 (61-213)||(34819397-34819549)
chr8 (61-213)||(40075487-40075639)
chr8 (70-199)||(30761068-30761197)
chr8 (61-209)||(35554710-35554858)
chr8 (81-212)||(20859132-20859263)
chr8 (16-159)||(45132908-45133050)
chr8 (87-213)||(12716091-12716216)
chr8 (70-192)||(39831541-39831663)
chr8 (85-182)||(41239359-41239456)
chr8 (85-192)||(15033570-15033677)
chr8 (16-157)||(21176081-21176219)
chr8 (91-192)||(42482317-42482418)
chr8 (85-192)||(34367429-34367536)
chr8 (93-199)||(52214-52320)
chr8 (91-192)||(22307-22408)
chr8 (91-192)||(1055671-1055772)
chr8 (91-192)||(23019098-23019199)
chr8 (91-192)||(26662592-26662693)
chr8 (95-192)||(486548-486645)
[»] chr6 (16 HSPs)
chr6 (16-213)||(2405793-2405990)
chr6 (57-213)||(24885416-24885572)
chr6 (16-213)||(2407342-2407533)
chr6 (60-196)||(26173052-26173187)
chr6 (70-197)||(18001601-18001728)
chr6 (85-192)||(31771201-31771308)
chr6 (85-192)||(22304375-22304482)
chr6 (85-192)||(27638893-27639000)
chr6 (91-209)||(3384549-3384667)
chr6 (82-177)||(3502142-3502237)
chr6 (91-192)||(6204294-6204395)
chr6 (91-192)||(11691261-11691362)
chr6 (91-192)||(30826429-30826530)
chr6 (90-157)||(32641674-32641741)
chr6 (70-157)||(32643068-32643155)
chr6 (70-157)||(24085617-24085704)
[»] chr4 (29 HSPs)
chr4 (16-213)||(51686232-51686423)
chr4 (16-159)||(41930801-41930944)
chr4 (61-212)||(8110270-8110421)
chr4 (61-209)||(46439142-46439283)
chr4 (82-198)||(14317742-14317858)
chr4 (76-212)||(50020500-50020636)
chr4 (76-212)||(50196449-50196585)
chr4 (16-212)||(50904440-50904636)
chr4 (85-199)||(50278271-50278385)
chr4 (61-198)||(10729781-10729918)
chr4 (61-198)||(10943550-10943687)
chr4 (85-192)||(21018397-21018504)
chr4 (85-192)||(30723546-30723653)
chr4 (85-192)||(37016409-37016516)
chr4 (81-196)||(72072-72187)
chr4 (85-192)||(41795844-41795951)
chr4 (91-178)||(44674656-44674743)
chr4 (85-192)||(49168656-49168763)
chr4 (91-192)||(1305945-1306046)
chr4 (91-192)||(6178615-6178716)
chr4 (81-199)||(21535045-21535163)
chr4 (85-192)||(40355223-40355329)
chr4 (91-192)||(31424885-31424986)
chr4 (91-192)||(49093567-49093668)
chr4 (84-146)||(12892091-12892153)
chr4 (16-55)||(30708171-30708210)
chr4 (118-176)||(11081483-11081541)
chr4 (99-158)||(40886456-40886515)
chr4 (76-146)||(13624332-13624402)
[»] chr2 (16 HSPs)
chr2 (16-157)||(7416959-7417100)
chr2 (57-199)||(6637866-6638011)
chr2 (16-157)||(25514799-25514931)
chr2 (87-193)||(36653303-36653409)
chr2 (81-192)||(39950633-39950744)
chr2 (64-192)||(29398389-29398517)
chr2 (70-157)||(40538702-40538789)
chr2 (91-192)||(30493772-30493873)
chr2 (85-192)||(17423599-17423706)
chr2 (64-192)||(28471673-28471803)
chr2 (94-192)||(10825732-10825830)
chr2 (91-192)||(15834401-15834502)
chr2 (91-192)||(43536515-43536616)
chr2 (91-192)||(43981666-43981767)
chr2 (91-192)||(5355116-5355217)
chr2 (91-152)||(3938350-3938411)
[»] scaffold0155 (1 HSPs)
scaffold0155 (81-146)||(12538-12603)


Alignment Details
Target: chr5 (Bit Score: 154; Significance: 8e-82; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 38971356 - 38971159
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  38971356 atgaaaatatacaccaagacatgaaaatatatcctaaacataaaatattactactcctggtcctgctgatgctgctcgtgcctcctcctcggcctttggc 38971257  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    |||||||  |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  38971256 ctcgcctcttggtcaagatcggcgcgatctgctccctaacatgggtcatggcctgaaaccactgttgagggctcatggcctcctcctgacctatctgc 38971159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 42539101 - 42538915
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| |  ||||  ||||||||||||||||||||||||| |||         
T  42539101 atgaaaatatacaccaagtcctaaaaatctatcctaaacataaaatactactactcttagtcctgttgatgctgctggtgcctcctcctcgacct----- 42539007  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctat 209  Q
      ||||| |||||||| |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  42539006 --cgcctcctggtcaaaatcggcgcgatctgctccttaacatgggtcatggcctgaaaccactgttgagggctcatgacctcctcctgacctat 42538915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 511409 - 511562
Alignment:
Q  61 tactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatggg 160  Q
    |||| ||||||||| | || ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  ||||||||||| |    
T  511409 tactgctactcctggttctgctgatgctgctggtgccacctcctcggcctttggcctcgcctcctggtcaagatcggtgcgatctactccctaacatgag 511508  T
Q  161 tcatcgcctgaaaccactg-ttgagggctcatgacctccttctgacctatctgc 213  Q
    |||| |||||||||||||| |||| ||||||||||||||| ||| |||||||||    
T  511509 tcatggcctgaaaccactgcttgaaggctcatgacctcctcctggcctatctgc 511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 15939956 - 15939813
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| |  | |||||| |||||||||| |||||||||||| ||||    
T  15939956 atgaaaatatacaccaagtcctaaaaatatatcctaaacataagatactactactcctggtgttgctgatgttgctggtgccgcctcctcggcctctggc 15939857  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgg 159  Q
    ||||||| |||  ||| |||||||||||||| ||||||||||||    
T  15939856 ctcgcctcctgaccaatatcggcgcgatctgctccctaacatgg 15939813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 5200036 - 5199905
Alignment:
Q  61 tactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatggg 160  Q
    |||||||  ||||| |||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| ||||||| ||||     
T  5200036 tactactggtcctggtcctgctgatgctgctggtgcctcctcctcggcctctggcttcgcctcctggtcaagatcggcgcgatctgctccctaagatggc 5199937  T
Q  161 tcatcgcctgaaaccactgttgagggctcatg 192  Q
    ||||  ||||||||||||| ||||||||||||    
T  5199936 tcatgacctgaaaccactgctgagggctcatg 5199905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 40622792 - 40622944
Alignment:
Q  61 tactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatggg 160  Q
    |||| ||| ||||| |||| |||||| || |||||||||||||||||||| |||||| |||| |||| ||| |||| ||||||||| || |||||||||     
T  40622792 tactgctagtcctggtcctgctgatgttgttggtgcctcctcctcggcctctggccttgcctcctggccaatatcgccgcgatctgctctctaacatggc 40622891  T
Q  161 tcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  40622892 tcatggcctgaaaccattgttgagggctcatgacctccgtctgacccatctgc 40622944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 8468 - 8575
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||| ||||||| |||||||| |||||||||||||| ||||| | ||||||||| |||| ||||||||||||||    
T  8468 tgctgatggtgcctcctcctcggcctctgggctcgcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgttgag 8567  T
Q  185 ggctcatg 192  Q
    || |||||    
T  8568 gggtcatg 8575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 212
Target Start/End: Original strand, 42937467 - 42937594
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| ||||||||||||||| |||| ||||||||||| || |  || |||||||| ||||| |||||||||||| |||| |||||| ||||||||||||    
T  42937467 tgctgatggtgcctcctcctcagcctctggcctcgcctccttgctaatatcggcgcaatctgctccctaacatggctcatggcctgataccactgttgag 42937566  T
Q  185 ggctcatgacctccttctgacctatctg 212  Q
    |||||||| |||||| ||| ||||||||    
T  42937567 ggctcatgccctcctcctggcctatctg 42937594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 38407662 - 38407763
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||| | |||| |||| |||||||||||||| |||||| |||    
T  38407662 tggtgcctcctcctcggcctatggcctcgcctcctggtcaaaatcggcgcgatctgctccctcatatggctcatggcctgaaaccactgctgaggggtca 38407761  T
Q  191 tg 192  Q
    ||    
T  38407762 tg 38407763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 8577344 - 8577451
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||||| |||||| |||| || ||||| | ||||||||| |||| ||||||||||||||    
T  8577344 tgctgatggtgcctcctcctcggcctttgggctcgcctcctggtcaaaatcggcacgatttgctccctcatatgggtcatggcctcaaaccactgttgag 8577443  T
Q  185 ggctcatg 192  Q
    || |||||    
T  8577444 gggtcatg 8577451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 28238544 - 28238645
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    ||||||||||||| |||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| ||||||||| ||||||||||    
T  28238544 tggtgcctcctccccggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgagggctca 28238643  T
Q  191 tg 192  Q
    ||    
T  28238644 tg 28238645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 36503413 - 36503485
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgct 88  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||    
T  36503413 atgaaaatatacaccaagttatgaaaatatatcttaaacataaaatactactactcttgatcctgctggtgct 36503485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 7761787 - 7761688
Alignment:
Q  93 gtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatg 192  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||| |||||||| ||| | | |||| |||| |||||||||||||| |||||| |||||    
T  7761787 gtgcctcctcctcggcctctggcctcgcctcctggtcaaaatcggtgcgatctgctccttcatatggctcatggcctgaaaccactgctgaggggtcatg 7761688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 28879850 - 28879743
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | |||| |||| |||| ||||||||| ||||    
T  28879850 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatggatcatggcctcaaaccactgctgag 28879751  T
Q  185 ggctcatg 192  Q
    || |||||    
T  28879750 gggtcatg 28879743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 30708291 - 30708192
Alignment:
Q  93 gtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatg 192  Q
    |||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| ||||||||| |||||| |||||    
T  30708291 gtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgaggggtcatg 30708192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 19037968 - 19038075
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||| ||||||||| ||| ||| ||| |||||||  |||||| ||||||| ||||| | ||||||||| |||| ||||||||||||||    
T  19037968 tgctgatggtgcctccgcctcggcctctgggctctcctcctggtcagaatcggcacgatctgctccctcatatgggtcatggcctcaaaccactgttgag 19038067  T
Q  185 ggctcatg 192  Q
    || |||||    
T  19038068 gggtcatg 19038075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 8699237 - 8699272
Alignment:
Q  87 ctgctggtgcctcctcctcggcctttggcctcgcct 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  8699237 ctgctggtgcctcctcctcggcctctggcctcgcct 8699272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 38119901 - 38120098
Alignment:
Q  17 tgaaaatatacaccaagtcatgaaaatatatcctaaa-cataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38119901 tgaaaatatacaccaagtcatgaaaatatatcctaaaacataaaatattactactcctgatcctactgatgctgccggtgcctcctcctcggcctttggc 38120000  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    || |||| ||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||  ||||||||||||    
T  38120001 ctagcctcctggtcaagatcggcacgatctggtccctaacatgggtcatcgtctgaaaccactgctgagggctcatgacctcctcttgacctatctgc 38120098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 11197171 - 11196980
Alignment:
Q  19 aaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctc 118  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||   |||| |||| |||||| || |||||||||||| ||||||| |||||||    
T  11197171 aaaatatataccaagtcatgaaaatatatcctaaacattaaatactact---cctggtcctgctgatgttgttggtgcctcctcttcggcctctggcctc 11197075  T
Q  119 gcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    |||| || |||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  11197074 gcctcctagtcaagatcggcgcgatctgctcctcaacatggatcatggcctgaaaccactgttgagggctcatgacctcctcctgacctaactgc 11196980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 61 - 197
Target Start/End: Complemental strand, 45828845 - 45828709
Alignment:
Q  61 tactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatggg 160  Q
    |||| ||||||||| |||| |||||||||||||||||| ||||| ||||| | ||||||||| ||||||||||||||||||||||| |||||||||||||    
T  45828845 tactgctactcctggtcctgctgatgctgctggtgccttctccttggcctctagcctcgcctcctggtcaagatcggcgcgatctgctccctaacatggg 45828746  T
Q  161 tcatcgcctgaaaccactgttgagggctcatgacctc 197  Q
    |||| ||||||||||||||||||||||||||||||||    
T  45828745 tcatggcctgaaaccactgttgagggctcatgacctc 45828709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 47661116 - 47660994
Alignment:
Q  87 ctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgaggg 186  Q
    |||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  47661116 ctgctggtgcctcctcatcgacccatggcctcgcctcctggtcaagatcggcgcgatctgctccctaacatgggtcatggcctgaaaccgctgttgaggg 47661017  T
Q  187 ctcatgacctccttctgacctat 209  Q
    ||||||||||||| |||||||||    
T  47661016 ctcatgacctcctcctgacctat 47660994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 90 - 213
Target Start/End: Original strand, 23273217 - 23273340
Alignment:
Q  90 ctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctc 189  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||| | ||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  23273217 ctggtgccacctcctcggcctctggcctcgcctcctggtcaagattgacgcgatctgctccataacatgggtcatggcctgaaaccactgttgagggctc 23273316  T
Q  190 atgacctccttctgacctatctgc 213  Q
    |||||||||| ||| |||| ||||    
T  23273317 atgacctcctcctggcctaactgc 23273340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 51337165 - 51337036
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcct 169  Q
    ||||| |||| ||||||||||||||||||||||||| |||| ||||||||||| |||| ||| |||||||||||||| || ||||||||| |||| ||||    
T  51337165 tcctgttcctgctgatgctgctggtgcctcctcctcagcctctggcctcgcctcctggccaatatcggcgcgatctgctctctaacatggctcatggcct 51337066  T
Q  170 gaaaccactgttgagggctcatgacctcct 199  Q
    ||||||| || |||||||||||||||||||    
T  51337065 gaaaccattgatgagggctcatgacctcct 51337036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 22527269 - 22527139
Alignment:
Q  62 actactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggt 161  Q
    ||||||||| ||| |||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||| ||| |||| |    
T  22527269 actactactactggtcctgctgatgctgctggtgcctcctcctcggcctctggcctcgcctcctggtcaagataggcgcgatctgctccttaagatggct 22527170  T
Q  162 catcgcctgaaaccactgttgagggctcatg 192  Q
    ||| |||| |||| |||| |||||| |||||    
T  22527169 catggcctcaaacgactgctgaggggtcatg 22527139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 94916 - 95020
Alignment:
Q  88 tgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggc 187  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||||||| ||||||| |||| |||| |||||||||||||||||||||     
T  94916 tgctggtgcctcctcctcggcctctagcctcgcctcctggtcaagataggcgcgatctgctccctaagatggctcatggcctgaaaccactgttgagggg 95015  T
Q  188 tcatg 192  Q
    |||||    
T  95016 tcatg 95020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 19522092 - 19522206
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| |||||||||||  ||||||| |||||||||||||| ||||| | |||  |||| |||||||||||||||||||    
T  19522092 tgctgatggtgcctcctcctcggcctctggcctcgcctcttggtcaaaatcggcgcgatctgctccctcatatgactcatggcctgaaaccactgttgag 19522191  T
Q  185 ggctcatgacctcct 199  Q
    |||||||| ||||||    
T  19522192 ggctcatgtcctcct 19522206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 70 - 192
Target Start/End: Complemental strand, 47505607 - 47505485
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcct 169  Q
    ||||| |||| ||||||||| |||||||||||||||||||| |||||||||||  |||||||||| |||| |||||| || |||| |||| |||| ||||    
T  47505607 tcctggtcctgctgatgctgttggtgcctcctcctcggcctctggcctcgcctcatggtcaagataggcgtgatctgctctctaatatggctcatggcct 47505508  T
Q  170 gaaaccactgttgagggctcatg 192  Q
    ||||||||||||||||| |||||    
T  47505507 gaaaccactgttgaggggtcatg 47505485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 78 - 199
Target Start/End: Original strand, 35256210 - 35256331
Alignment:
Q  78 ctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccac 177  Q
    |||||| ||||| ||||| |||||||||||||| ||||||||||| || | ||| |||||||||||||| || ||||||| | |||| || ||||||||     
T  35256210 ctactgctgctgttggtgtctcctcctcggcctctggcctcgcctccttgccaatatcggcgcgatctgctctctaacatagctcatggcttgaaaccat 35256309  T
Q  178 tgttgagggctcatgacctcct 199  Q
    ||||||||||||||||||||||    
T  35256310 tgttgagggctcatgacctcct 35256331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 19159272 - 19159165
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||| ||||| ||| ||||||| |||||||| |||||||||||||| ||||| | ||||||||| |||| ||||||||| ||||    
T  19159272 tgctgatggtgcctcctcctgggcctctgggctcgcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgag 19159173  T
Q  185 ggctcatg 192  Q
    || |||||    
T  19159172 gggtcatg 19159165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 13636805 - 13636912
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||| ||| ||| |||||||| ||||||| |||||| ||||| | ||||||||| |||| ||||||||| ||||    
T  13636805 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgtgatctgctccctcatatgggtcatggcctcaaaccactgctgag 13636904  T
Q  185 ggctcatg 192  Q
    || |||||    
T  13636905 gggtcatg 13636912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 21144175 - 21144088
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccact 178  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||| ||||| | |||| |||| |||||||||||||    
T  21144175 tggtgcctcctcctcggcctctggcctcgcctcctggtcaaaatcagcgcgatctgctccctcatatggctcatggcctgaaaccact 21144088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 26878955 - 26878854
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  26878955 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 26878856  T
Q  191 tg 192  Q
    ||    
T  26878855 tg 26878854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 31780472 - 31780600
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| | | ||||||| |||||||| |||||||||||||| ||||| | |||| |||| |||| |||||||||  |||    
T  31780472 tgctgatggtgcctcctcctcggcctctaggctcgcctcctggtcaaaatcggcgcgatctgttccctcatatggctcatggcctaaaaccactgccgag 31780571  T
Q  185 ggctcatgacctccttctgacctatctgc 213  Q
    || |||||  ||||| ||| |||| ||||    
T  31780572 gggtcatgctctcctcctggcctaactgc 31780600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 52805119 - 52805012
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||| || |||||| |||| ||||| | |||| || | |||||||||||||  ||||    
T  52805119 tgctgatggtgcctcctcctcggcctctggcctcgcctcctggtcaaaattggcgcggtctgctccctcatatggctcgtggcctgaaaccactactgag 52805020  T
Q  185 ggctcatg 192  Q
    || |||||    
T  52805019 gggtcatg 52805012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 3729154 - 3729255
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| || ||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  3729154 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaattggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 3729253  T
Q  191 tg 192  Q
    ||    
T  3729254 tg 3729255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 8548336 - 8548257
Alignment:
Q  90 ctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcct 169  Q
    ||||||||||||||||||||||||| ||| ||| |||||||| |||| ||||||||| ||||| | ||||||||| ||||    
T  8548336 ctggtgcctcctcctcggcctttgggctctcctcctggtcaaaatcgacgcgatctgctccctcatatgggtcatggcct 8548257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 50617697 - 50617798
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| || ||| ||||||||||||| | ||||||||| |||||||| ||||| |||||||| ||||| | |||| |||| |||||||||||| | ||||    
T  50617697 tgctgatgatgcatcctcctcggcctctagcctcgcctcctggtcaaaatcggtgcgatctgctccctcatatggctcatggcctgaaaccacagctgag 50617796  T
Q  185 gg 186  Q
    ||    
T  50617797 gg 50617798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 470633 - 470574
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatc 144  Q
    ||||| || ||||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  470633 tgctgatgctgcctcctcctcggcctctggcctcgcctcctggtcaaaatcggcgcgatc 470574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 49854822 - 49854897
Alignment:
Q  82 tgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacat 157  Q
    ||||| || |||||||||||||||||||| |||||||||||  |||| | ||||||| ||||||| | ||||||||    
T  49854822 tgatgttgttggtgcctcctcctcggcctctggcctcgcctcttggtaatgatcggcacgatctgctgcctaacat 49854897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 23273168 - 23273218
Alignment:
Q  17 tgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactact 67  Q
    ||||||||||||||||||| | ||||| |||||| ||||||||||||||||    
T  23273168 tgaaaatatacaccaagtcctaaaaatctatcctcaacataaaatactact 23273218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 16269590 - 16269667
Alignment:
Q  76 tcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatcccta 153  Q
    ||||| |||||||| || |||| ||| |||| ||| ||||||||| | ||||||||||||||| ||||||| ||||||    
T  16269590 tcctattgatgctgttgttgccgcctgctcgacctctggcctcgcgtcctggtcaagatcggcacgatctgctcccta 16269667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 42759958 - 42759761
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| || ||||||||||||||||||||||||||| ||||    
T  42759958 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcatggtcctgctaatgctgctggtgcctcctcctcggcctctggc 42759859  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    |||||||  ||||||||||||||||||| || ||||| ||||||||||| |||||||||||||| |||||| |||||||||||| |||||||||||||    
T  42759858 ctcgcctcttggtcaagatcggcgcgatgtgctcccttacatgggtcatggcctgaaaccactgctgagggttcatgacctcctcctgacctatctgc 42759761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 11380774 - 11380971
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  11380774 atgaaaatatacaccaagtcctaaaaatctatcctaaacataaaatactactactcctggtcctgttgatgctgctggtgcctcctcctcggcctttggc 11380873  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    ||||| | || |||||||||| ||||||||| |||||||||||||||||  ||||||||||||| ||||| ||||||||||||| ||| |||||||||    
T  11380874 ctcgcttcctagtcaagatcgccgcgatctgctccctaacatgggtcatgacctgaaaccactgctgaggactcatgacctcctcctgtcctatctgc 11380971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 70 - 213
Target Start/End: Complemental strand, 20353802 - 20353659
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcct 169  Q
    ||||| |||| |||||||||||||||||||||||||||||| |||||||| || ||||||| ||||||||||||||| |||| || ||||||||| ||||    
T  20353802 tcctggtcctgctgatgctgctggtgcctcctcctcggcctctggcctcgtctcctggtcatgatcggcgcgatctgctccccaagatgggtcatggcct 20353703  T
Q  170 gaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    |||||||||| ||||||||||||||||||| ||| |||| ||||    
T  20353702 gaaaccactgatgagggctcatgacctcctcctggcctaactgc 20353659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 6928395 - 6928243
Alignment:
Q  61 tactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatggg 160  Q
    |||| ||||||||| |||| |||||| ||||||||| ||||||| ||| | ||||||||||| ||||||||||||||||||||||| ||||||||| | |    
T  6928395 tactgctactcctggtcctgctgatggtgctggtgcatcctccttggcatctggcctcgcctcctggtcaagatcggcgcgatctgctccctaacacgag 6928296  T
Q  161 tcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    |||| |||||||||||||| |||||| ||||||| |||| |||||||||||||    
T  6928295 tcatggcctgaaaccactgctgagggatcatgacatcctcctgacctatctgc 6928243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 76 - 208
Target Start/End: Complemental strand, 44232966 - 44232834
Alignment:
Q  76 tcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaacc 175  Q
    |||| |||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||||||| |||| ||||||| |||| | || ||||||||||    
T  44232966 tcctgctgatgctgctggtgcctcctcctcgacctatgggctcgcctcctggtcaagatcggcgcgttctgctccctaagatggcttatggcctgaaacc 44232867  T
Q  176 actgttgagggctcatgacctccttctgaccta 208  Q
    |||||||||||||||||||||||| ||| ||||    
T  44232866 actgttgagggctcatgacctcctcctggccta 44232834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 61 - 194
Target Start/End: Complemental strand, 48566090 - 48565957
Alignment:
Q  61 tactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatggg 160  Q
    |||| ||||||||| || |  ||||| || |||||||||||||||||||| ||||||  ||| ||||||||||||||||||||||| |||||||||||||    
T  48566090 tactgctactcctggtcttgttgatgttgttggtgcctcctcctcggcctctggcctaccctcctggtcaagatcggcgcgatctgctccctaacatggg 48565991  T
Q  161 tcatcgcctgaaaccactgttgagggctcatgac 194  Q
    |||| ||||| |||||||| ||||||||||||||    
T  48565990 tcatggcctgcaaccactgctgagggctcatgac 48565957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 192
Target Start/End: Complemental strand, 41615510 - 41615394
Alignment:
Q  76 tcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaacc 175  Q
    |||| |||||| || |||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||| ||||||| |||| |||| ||||||||||    
T  41615510 tcctgctgatgttgttggtgcctcctcctcggcctctggcctcacctcctggtcaagatcggcgcaatctgctccctaagatggctcatggcctgaaacc 41615411  T
Q  176 actgttgagggctcatg 192  Q
    |||||||||||||||||    
T  41615410 actgttgagggctcatg 41615394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 70 - 192
Target Start/End: Original strand, 16861562 - 16861684
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcct 169  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| |||| ||||| || |||| |||| |||| ||||    
T  16861562 tcctggtcctactgatgctgctggtgcctcctcctcggcctctggcctcgcctcctgttcaagatcagcgcaatctgctctctaagatggctcatggcct 16861661  T
Q  170 gaaaccactgttgagggctcatg 192  Q
    |||||||||| |||||| |||||    
T  16861662 gaaaccactgctgaggggtcatg 16861684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 203
Target Start/End: Complemental strand, 48891766 - 48891645
Alignment:
Q  82 tgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgtt 181  Q
    |||||||||||||||||||||||| |||| |||||| |||| |||  ||| |||| ||||||||| || ||||||||| |||| ||||||||||| || |    
T  48891766 tgatgctgctggtgcctcctcctcagcctctggccttgccttctgaccaatatcgacgcgatctgctctctaacatggctcatggcctgaaaccattgct 48891667  T
Q  182 gagggctcatgacctccttctg 203  Q
    ||||||||||||||||||||||    
T  48891666 gagggctcatgacctccttctg 48891645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 52388414 - 52388521
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| | ||||||||| |||||||||||||| | ||    
T  52388414 tgctgatggtgcctcctcctcggcctctggcctcgcctcctggtcaagattggcgcgatctgctccctcatatgggtcatggcctgaaaccactgctaag 52388513  T
Q  185 ggctcatg 192  Q
    || |||||    
T  52388514 gggtcatg 52388521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 4005215 - 4005322
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| |||||| ||||  |||||||||||||| ||||||| ||||| | ||||||||| |||||||||||||| ||||    
T  4005215 tgctgatggtgcctcctcctcggcctctggccttgcctcttggtcaagatcggcacgatctgctccctcatatgggtcatggcctgaaaccactgctgag 4005314  T
Q  185 ggctcatg 192  Q
    || |||||    
T  4005315 gggtcatg 4005322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 16646747 - 16646640
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||| ||| ||||||||||| |||||||| |||||| ||||||| ||||| | |||| |||| |||||||||||||||||||    
T  16646747 tgctgatggtgcctcctcctcgacctctggcctcgcctcctggtcaaaatcggcacgatctgctccctcatatggctcatggcctgaaaccactgttgag 16646648  T
Q  185 ggctcatg 192  Q
    || |||||    
T  16646647 gggtcatg 16646640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 9473528 - 9473421
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| || |||||||| || |||||||||||||||||||| ||||| | ||||||||| ||||||||| |||| | ||    
T  9473528 tgctgatggtgcctcctcctcggcctctgacctcgcctcctagtcaagatcggcgcgatctgctccctcatatgggtcatggcctgaaactactgctaag 9473429  T
Q  185 ggctcatg 192  Q
    || |||||    
T  9473428 gggtcatg 9473421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 47070987 - 47071095
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctg-aaaccactgttga 183  Q
    ||||| |||||||||||||||||||| |||| |||||| |||||||| |||||||||||||| ||||| | |||| |||| ||||| ||||||||| |||    
T  47070987 tgctgatggtgcctcctcctcggcctctggcatcgcctcctggtcaaaatcggcgcgatctgctccctcatatggctcatggcctgaaaaccactgctga 47071086  T
Q  184 gggctcatg 192  Q
    ||| |||||    
T  47071087 ggggtcatg 47071095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 2648377 - 2648484
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| ||||||||| | ||    
T  2648377 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctaag 2648476  T
Q  185 ggctcatg 192  Q
    || |||||    
T  2648477 gggtcatg 2648484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 36130722 - 36130615
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| |||||| || |  |||||||||||||||||||||| ||||| | ||| ||||| | |||||||||||| ||||    
T  36130722 tgctgatggtgcctcctcctcggcctctggccttgcatcttggtcaagatcggcgcgatctgctccctcatatgcgtcatggactgaaaccactgctgag 36130623  T
Q  185 ggctcatg 192  Q
    || |||||    
T  36130622 gggtcatg 36130615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 34048671 - 34048570
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  34048671 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 34048572  T
Q  191 tg 192  Q
    ||    
T  34048571 tg 34048570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 42900967 - 42901068
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  42900967 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 42901066  T
Q  191 tg 192  Q
    ||    
T  42901067 tg 42901068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 46698122 - 46698223
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  46698122 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 46698221  T
Q  191 tg 192  Q
    ||    
T  46698222 tg 46698223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 49141337 - 49141438
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  49141337 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 49141436  T
Q  191 tg 192  Q
    ||    
T  49141437 tg 49141438  T

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Target: chr3; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 54389371 - 54389270
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  54389371 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 54389272  T
Q  191 tg 192  Q
    ||    
T  54389271 tg 54389270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 49266177 - 49266277
Alignment:
Q  92 ggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcat 191  Q
    ||||||||||||||||||| ||||||||||| ||||||||||  ||||| ||||| ||||||| |||| | || |||||||||||||| | |||| ||||    
T  49266177 ggtgcctcctcctcggcctctggcctcgcctcctggtcaagacaggcgcaatctgctccctaagatggctgatggcctgaaaccactgctaaggggtcat 49266276  T
Q  192 g 192  Q
    |    
T  49266277 g 49266277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 600081 - 599998
Alignment:
Q  114 gcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctc 197  Q
    ||||||||| |||||||| |||||||||||||| ||||| | |||| |||| |||||||||||||| || ||||||||||||||    
T  600081 gcctcgcctcctggtcaaaatcggcgcgatctgctccctcatatggctcatggcctgaaaccactgctgggggctcatgacctc 599998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 145
Target Start/End: Original strand, 42804750 - 42804825
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatct 145  Q
    ||||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| | ||| ||||||||||    
T  42804750 tcctggtcctactgatgctgttggtgcctcctcctcggcctctggcctcgcctcctggtaatgattggcgcgatct 42804825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 46401957 - 46401850
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||| ||||||||| |||  || ||| |||||||  |||||||||||||| ||||| | ||||||||| |||| ||||||||||||||    
T  46401957 tgctgatggtgcctccgcctcggcctctgggttctcctcctggtcagaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgttgag 46401858  T
Q  185 ggctcatg 192  Q
    || |||||    
T  46401857 ggatcatg 46401850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 50213974 - 50214060
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccac 177  Q
    |||||||||||||||||||| ||||||||||| || ||||| |||||||||||||| || || | |||| |||| ||||||||||||    
T  50213974 tggtgcctcctcctcggcctctggcctcgcctcctagtcaaaatcggcgcgatctgctctcttatatggctcatggcctgaaaccac 50214060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 50477584 - 50477685
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| ||| |||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  50477584 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcagcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 50477683  T
Q  191 tg 192  Q
    ||    
T  50477684 tg 50477685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 18752059 - 18751920
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||   |||| | ||||| ||||||||| | |||||| |||||||| || || | |||||| || || ||||||||||||||||| ||||    
T  18752059 atgaaaatatacatatagtcctaaaaatctatcctaaatagaaaatattactactcttggtcttgctgatgttggtgttgcctcctcctcggcctctggc 18751960  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaac 155  Q
    | ||  | ||||||| ||||||||||||||| | ||||||    
T  18751959 cccgtttcctggtcatgatcggcgcgatctgcttcctaac 18751920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 30252898 - 30252968
Alignment:
Q  87 ctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacat 157  Q
    |||||||||||||||||||||||| ||||||||||| | ||| | ||||||||||||||| | ||||||||    
T  30252898 ctgctggtgcctcctcctcggcctctggcctcgcctccaggtaatgatcggcgcgatctgctgcctaacat 30252968  T

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Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 17562171 - 17562244
Alignment:
Q  113 ggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgaggg 186  Q
    |||||||||| ||||||||||| ||||||||||| ||||||| |||| |||| ||||||||||| || ||||||    
T  17562171 ggcctcgcctcctggtcaagataggcgcgatctgctccctaagatggctcatggcctgaaaccattgctgaggg 17562244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 2271857 - 2271964
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||| ||||||| || ||||| || |||| |||||| | ||| | |||| |||| |||| ||||||||| ||||    
T  2271857 tgctgatggtgcctcctcctcggcctctgggctcgcctcctagtcaaaattggcgtgatctgcttcctcatatggctcatggcctcaaaccactgctgag 2271956  T
Q  185 ggctcatg 192  Q
    || |||||    
T  2271957 gggtcatg 2271964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 26334789 - 26334841
Alignment:
Q  94 tgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctg 146  Q
    |||| |||||||||||| |||||||| || |||||||| ||||||||||||||    
T  26334789 tgccgcctcctcggcctctggcctcgtctcctggtcaatatcggcgcgatctg 26334841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 12374008 - 12373946
Alignment:
Q  26 acaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgct 88  Q
    |||||||||| | ||||| | ||| |||||||||||||| ||||| ||||||||||| |||||    
T  12374008 acaccaagtcctaaaaatctgtccgaaacataaaatactcctactgctgatcctactcatgct 12373946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 37343565 - 37343368
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || | |||||||| ||||||||||||| ||||| | ||||    
T  37343565 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcatggtcttgctgatgctactggtgcctcctcatcggcttctggc 37343466  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    ||||||| || |||||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||    
T  37343465 ctcgcctcctagtcaagatcggcgcgatctgcttcctaacatgggtcatggtctgaaaccactgttgagggctcatgacctcctcctgacctatctgc 37343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 41735043 - 41734850
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| | ||| ||      
T  41735043 atgaaaatatacaccaagtcatgaaactatatcctaaacataaaatactactactcctggtcctgctgatgctgctggtgcctcctccttgacctatgaa 41734944  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctat 209  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||||||    
T  41734943 ctcgcctcctggtcaagatcggcgcgatctgttccctaacatgggtcatggcctgaaaccactgctgaaggctcatgacctcctcctgacctat 41734850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 84 - 199
Target Start/End: Complemental strand, 16680706 - 16680591
Alignment:
Q  84 atgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttga 183  Q
    ||||||||||||||||||||||||||| || |||||||| ||| ||||||||||||||||||  ||||||| |||| |||| ||||||||||||||||||    
T  16680706 atgctgctggtgcctcctcctcggcctctgacctcgcctcctgatcaagatcggcgcgatctactccctaagatggctcatggcctgaaaccactgttga 16680607  T
Q  184 gggctcatgacctcct 199  Q
    ||||||||||||||||    
T  16680606 gggctcatgacctcct 16680591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 84 - 199
Target Start/End: Complemental strand, 17654942 - 17654827
Alignment:
Q  84 atgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttga 183  Q
    ||||||||||||||||||||||||||| || |||||||| ||| ||||||||||||||||||  ||||||| |||| |||| ||||||||||||||||||    
T  17654942 atgctgctggtgcctcctcctcggcctctgacctcgcctcctgatcaagatcggcgcgatctactccctaagatggctcatggcctgaaaccactgttga 17654843  T
Q  184 gggctcatgacctcct 199  Q
    ||||||||||||||||    
T  17654842 gggctcatgacctcct 17654827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 70 - 192
Target Start/End: Original strand, 47521767 - 47521889
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcct 169  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||| ||||||| |||| |||| ||||    
T  47521767 tcctggtcctgctgatgctgctggtgcctcctcctcggcctctggcctcgcctcctggtcaagacaggcgcgatctgctccctaagatggctcatggcct 47521866  T
Q  170 gaaaccactgttgagggctcatg 192  Q
     |||||||||||||||| |||||    
T  47521867 aaaaccactgttgaggggtcatg 47521889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 70 - 212
Target Start/End: Complemental strand, 16488634 - 16488492
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcct 169  Q
    ||||| |||| ||||||||| || |||| |||  |||||| |||||||||||| || ||||||||| ||| |||| | |||||||||||| |||| ||||    
T  16488634 tcctggtcctgctgatgctgttgttgccgccttgtcggcccttggcctcgcctcctagtcaagatcagcgtgatcggctccctaacatggctcatggcct 16488535  T
Q  170 gaaaccactgttgagggctcatgacctccttctgacctatctg 212  Q
    ||||||||||||||||||||||||||||||  ||||| |||||    
T  16488534 gaaaccactgttgagggctcatgacctcctcttgacccatctg 16488492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 70 - 212
Target Start/End: Complemental strand, 36980807 - 36980665
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcct 169  Q
    ||||| |||| ||||||||| | |||||||||||||||||| ||| ||||||| |||| ||| |||||||||||||  || ||||||||| |||| ||||    
T  36980807 tcctggtcctgctgatgctgttcgtgcctcctcctcggcctctggtctcgcctcctggccaatatcggcgcgatcttctctctaacatggctcatggcct 36980708  T
Q  170 gaaaccactgttgagggctcatgacctccttctgacctatctg 212  Q
     |||||| |||||||||||||||||||||| ||| || |||||    
T  36980707 aaaaccattgttgagggctcatgacctcctcctggcccatctg 36980665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 34741958 - 34741850
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    ||||||||||| |||||||  ||||||||||| |||||||| |||||||||||||| ||||| | |||| |||| |||||||||||||| ||||||||||    
T  34741958 tggtgcctccttctcggcccctggcctcgcctcctggtcaaaatcggcgcgatctgctccctcatatggctcatggcctgaaaccactgctgagggctca 34741859  T
Q  191 tgacctcct 199  Q
    |||||||||    
T  34741858 tgacctcct 34741850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 5538356 - 5538463
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||| | |||| |||| |||||||||||||| ||||    
T  5538356 tgctgatggtgcctcctcctcggcctctggcctcgcctcctggtcaaaatcggcgcgatctgctccctcatatggctcatggcctgaaaccactgctgag 5538455  T
Q  185 ggctcatg 192  Q
    || |||||    
T  5538456 gggtcatg 5538463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 11630143 - 11630227
Alignment:
Q  124 ctggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgaccta 208  Q
    ||||| ||||||||||||||||| ||||||||||||||| |  ||||||||||||| ||||||||||||||||||||||| ||||    
T  11630143 ctggtgaagatcggcgcgatctgctccctaacatgggtcctgacctgaaaccactgctgagggctcatgacctccttctggccta 11630227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 19801740 - 19801632
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| |||||| |||  ||||||||||||| ||| ||||| ||||||| |||| ||||  ||||||||||||  ||||||||||    
T  19801740 tggtgcctcctcctcggcctctggccttgccccctggtcaagatcgacgcaatctgctccctaagatggttcatgacctgaaaccactactgagggctca 19801641  T
Q  191 tgacctcct 199  Q
    |||||||||    
T  19801640 tgacctcct 19801632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 192
Target Start/End: Original strand, 27450481 - 27450600
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcct 169  Q
    ||||| |||| ||||||||| |||||||||   |||||||| ||||||||||| ||||||||||| ||||||||||| ||||||| |||  |||| ||||    
T  27450481 tcctggtcctgctgatgctgttggtgcctc---ctcggcctctggcctcgcctcctggtcaagataggcgcgatctgctccctaagatgactcatggcct 27450577  T
Q  170 gaaaccactgttgagggctcatg 192  Q
    |||||||||| |||||| |||||    
T  27450578 gaaaccactgctgaggggtcatg 27450600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 17838205 - 17838098
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| ||||||| |||||||||||||||| ||||||| |||||||| ||| |||||||||| ||||| | |||| |||| |||||||||||||| ||||    
T  17838205 tgctgatggtgccccctcctcggcctttgggctcgccttctggtcaaaatcagcgcgatctgctccctcatatggctcatggcctgaaaccactgctgag 17838106  T
Q  185 ggctcatg 192  Q
    || |||||    
T  17838105 gggtcatg 17838098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 48406604 - 48406503
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| ||||||||| |||||| |||    
T  48406604 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgaggggtca 48406505  T
Q  191 tg 192  Q
    ||    
T  48406504 tg 48406503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 15071088 - 15071195
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| |||||   ||||||||| |||| ||||||||| ||||    
T  15071088 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcttatgggtcatggcctcaaaccactgctgag 15071187  T
Q  185 ggctcatg 192  Q
    || |||||    
T  15071188 gggtcatg 15071195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 9368213 - 9368314
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  9368213 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 9368312  T
Q  191 tg 192  Q
    ||    
T  9368313 tg 9368314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 9491787 - 9491868
Alignment:
Q  76 tcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacat 157  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| | ||||||||    
T  9491787 tcctgctggtgctggtggtgcctcctcctcggcctttggcctcgcctcctggtaatgatcggcgcgatctgctgcctaacat 9491868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 17460073 - 17460174
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| ||||| || |||||||||||||| ||||| | ||||||||| |||| ||||||||| |||||| |||    
T  17460073 tggtgcctcctcctcggcctctgggctctcctcctggtaaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgaggggtca 17460172  T
Q  191 tg 192  Q
    ||    
T  17460173 tg 17460174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 17593141 - 17593040
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| ||||| || |||||||||||||| ||||| | ||||||||| |||| ||||||||| |||||| |||    
T  17593141 tggtgcctcctcctcggcctctgggctctcctcctggtaaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgaggggtca 17593042  T
Q  191 tg 192  Q
    ||    
T  17593041 tg 17593040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 35607202 - 35607303
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  35607202 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 35607301  T
Q  191 tg 192  Q
    ||    
T  35607302 tg 35607303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 41883786 - 41883685
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  41883786 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 41883687  T
Q  191 tg 192  Q
    ||    
T  41883686 tg 41883685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 70 - 157
Target Start/End: Original strand, 47669996 - 47670083
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacat 157  Q
    ||||| |||| |||||||| ||||||||||||||||||||| |||| |||||| ||||| |  |||||||||||||| | ||||||||    
T  47669996 tcctggtcctgctgatgctactggtgcctcctcctcggcctctggcatcgcctcctggtaattatcggcgcgatctggtgcctaacat 47670083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 10522076 - 10521975
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| || |||| |||||||| || ||||||||||| ||||| | |||| |||| |||| ||||||||  |||||| |||    
T  10522076 tggtgcctcctcctcggcctatgggcttgcctcctggtcaaaattggcgcgatctggtccctcatatggctcatggcctcaaaccacttctgaggggtca 10521977  T
Q  191 tg 192  Q
    ||    
T  10521976 tg 10521975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 192
Target Start/End: Complemental strand, 13323280 - 13323178
Alignment:
Q  90 ctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctc 189  Q
    |||||||||||||||||| || |  |||||||| |||||||  || ||||||||||| ||||| | |||| |||| |||||||||||||  |||||| ||    
T  13323280 ctggtgcctcctcctcggtctctatcctcgcctcctggtcataattggcgcgatctgctccctcatatggctcatggcctgaaaccactactgaggggtc 13323181  T
Q  190 atg 192  Q
    |||    
T  13323180 atg 13323178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 11630078 - 11630124
Alignment:
Q  19 aaaatatacaccaagtcatgaaaatatatcctaaacataaaatacta 65  Q
    ||||||||||||||||| | ||||| |||| ||||||||||||||||    
T  11630078 aaaatatacaccaagtcctaaaaatctatcataaacataaaatacta 11630124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 42504788 - 42504846
Alignment:
Q  134 tcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatg 192  Q
    ||||||||||||| ||||| | ||||||||| |||| ||||||||| |||||| |||||    
T  42504788 tcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgaggggtcatg 42504846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 5301061 - 5301258
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||  || || |||| |||||||||||||||||||||||||||||| ||||    
T  5301061 atgaaaatatacaccaagtcctaaaaatatatcctaaacataaaatactactggtcttggtcctgctgatgctgctggtgcctcctcctcggcctctggc 5301160  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    ||||||| || |||||||||||||||||||  |||||||||||| |||| |||||||||||||| ||||||||||||||||||| ||| |||| ||||    
T  5301161 ctcgcctcctagtcaagatcggcgcgatctactccctaacatggatcatggcctgaaaccactgctgagggctcatgacctcctcctggcctaactgc 5301258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 34819397 - 34819549
Alignment:
Q  61 tactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatggg 160  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  34819397 tactgctactcctggtcctgctgatgctgctggtgcctcctcctcggcctctggcctcgcctcctggtcaagatcggcgcgatctgctccctaacatggg 34819496  T
Q  161 tcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    | || |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  34819497 ttatggcctgaaaccactgctgagggctcatgacctcctcctgacctatctgc 34819549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 40075487 - 40075639
Alignment:
Q  61 tactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatggg 160  Q
    |||| ||||||||| |||| |||||| ||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||| |||||||||||||    
T  40075487 tactgctactcctggtcctgctgatgttgctggtgcctcctcctcggcctctggcctcgcctcatggtcaagatcggcgcgatctgctccctaacatggg 40075586  T
Q  161 tcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    |||| |||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  40075587 tcatggcctgaaaccactgctgagggctcatgacctcctcctggcctatctgc 40075639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 30761068 - 30761197
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcct 169  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||| |||||||||||| |||| ||||    
T  30761068 tcctggtcctactgatgctgctggtgcctcctcctcggcctctggcctcgcctcctggccaatatcggcgcgatctgctccctaacatggctcatggcct 30761167  T
Q  170 gaaaccactgttgagggctcatgacctcct 199  Q
    ||||||||||||||||||||||||||||||    
T  30761168 gaaaccactgttgagggctcatgacctcct 30761197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 35554858 - 35554710
Alignment:
Q  61 tactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatggg 160  Q
    |||| ||||||||| |||| |||||| ||||||||||||||||||||||| || |||||||| |||||||| |||||| ||||||| |||||||||||||    
T  35554858 tactgctactcctggtcctgctgatggtgctggtgcctcctcctcggcctctgtcctcgcctcctggtcaaaatcggcacgatctgctccctaacatggg 35554759  T
Q  161 tcatcgcctgaaaccactgttgagggctcatgacctccttctgacctat 209  Q
    |||| ||||||||||| || ||||||||||||| ||||| |||||||||    
T  35554758 tcatggcctgaaaccattgctgagggctcatgaactcctcctgacctat 35554710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 20859263 - 20859132
Alignment:
Q  81 ctgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgt 180  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||| || ||||||| |||| |||| ||||||||||||||     
T  20859263 ctgatgctgctggtgcctcctcctcggcctctggcctcgcctcttggtcaagatcggcgcgatttgctccctaagatggctcatggcctgaaaccactgc 20859164  T
Q  181 tgagggctcatgacctccttctgacctatctg 212  Q
    ||||||||||||||||||| ||| || |||||    
T  20859163 tgagggctcatgacctcctcctggcccatctg 20859132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 45133050 - 45132908
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| || || |  |||||||||||||||| |||||||||||| ||||    
T  45133050 atgaaaatatacac-aagtcctaaaaatatatcctaaacataaaatactactactcatggtcttgttgatgctgctggtgccgcctcctcggcctctggc 45132952  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgg 159  Q
    ||| ||| |||| ||| ||||||| |||||| || || ||||||    
T  45132951 ctctcctcctggccaatatcggcgtgatctgctctcttacatgg 45132908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 12716091 - 12716216
Alignment:
Q  87 ctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgaggg 186  Q
    |||||| |||| |||||||||||| ||||||||||| ||  |||| |||||||||||||| |||||||||||| |||| || |||||||| |||||||      
T  12716091 ctgctgttgccgcctcctcggcctctggcctcgcctccta-tcaatatcggcgcgatctgctccctaacatggctcatggcttgaaaccattgttgagaa 12716189  T
Q  187 ctcatgacctccttctgacctatctgc 213  Q
    ||||||||||||| |||||| ||||||    
T  12716190 ctcatgacctcctcctgacccatctgc 12716216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 192
Target Start/End: Original strand, 39831541 - 39831663
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcct 169  Q
    ||||| |||| |||||||||||| ||| ||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||| || |||| | || ||||    
T  39831541 tcctggtcctgctgatgctgctgttgcatcctcctcggcctctggcctcgcctcctggtcaagataggcgcgatctgctcccaaagatggcttatggcct 39831640  T
Q  170 gaaaccactgttgagggctcatg 192  Q
    | |||||||| |||||| |||||    
T  39831641 ggaaccactgctgaggggtcatg 39831663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 182
Target Start/End: Original strand, 41239359 - 41239456
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttg 182  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||| |||||| ||||||| ||||| | |||| |||| |||||||||||||||||    
T  41239359 tgctgatggtgcctcctcctcggcctctggcctcgcctcctggtcaaaatcggcacgatctgctccctcatatggctcatggcctgaaaccactgttg 41239456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 15033570 - 15033677
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||| ||||||| |||||||| |||||||||||||| ||||| | ||||||||| |||| ||||||||  ||||    
T  15033570 tgctgatggtgcctcctcctcggcctctgggctcgcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactactgag 15033669  T
Q  185 ggctcatg 192  Q
    || |||||    
T  15033670 gggtcatg 15033677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 21176081 - 21176219
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||||||||| | ||||| ||||||||||| |||||||||||||     ||||| |||||| || || ||||||| ||| ||||| | ||    
T  21176081 atgaaaatatacaccaagtcctaaaaatctatcctaaacagaaaatactactacgt---atcctgctgatgttgttgttgcctccaccttggcctctagc 21176177  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacat 157  Q
    ||||||| ||||||| || |||||||||||| ||||||||||    
T  21176178 ctcgcctcctggtcatgaacggcgcgatctgctccctaacat 21176219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 42482317 - 42482418
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| ||||||||| |||||| |||    
T  42482317 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgaggggtca 42482416  T
Q  191 tg 192  Q
    ||    
T  42482417 tg 42482418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 34367429 - 34367536
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| || ||||||||||||||||  ||||||||||| |||||||| ||| |||||||||| ||||| | |||| |||| |||||||||||||| ||||    
T  34367429 tgctgatgctgcctcctcctcggcccctggcctcgcctcctggtcaaaatcagcgcgatctgctccctcatatggctcatggcctgaaaccactgctgag 34367528  T
Q  185 ggctcatg 192  Q
    || |||||    
T  34367529 gggtcatg 34367536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 52320 - 52214
Alignment:
Q  93 gtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatg 192  Q
    ||||| |||||||||| | ||||||||||| |||| ||| ||||||| |||||| ||  |||||||| |||| ||||||||||| || ||||||||||||    
T  52320 gtgccccctcctcggcatgtggcctcgcctcctggccaatatcggcgtgatctgctctttaacatggctcatggcctgaaaccattgctgagggctcatg 52221  T
Q  193 acctcct 199  Q
    |||||||    
T  52220 acctcct 52214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 22307 - 22408
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||||||| ||| ||| | |||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  22307 tggtgcctcctcctcggcctttgggctctcctccaggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 22406  T
Q  191 tg 192  Q
    ||    
T  22407 tg 22408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 1055772 - 1055671
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  1055772 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 1055673  T
Q  191 tg 192  Q
    ||    
T  1055672 tg 1055671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 23019098 - 23019199
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  23019098 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 23019197  T
Q  191 tg 192  Q
    ||    
T  23019198 tg 23019199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 26662693 - 26662592
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  26662693 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 26662594  T
Q  191 tg 192  Q
    ||    
T  26662593 tg 26662592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 486548 - 486645
Alignment:
Q  95 gcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatg 192  Q
    |||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| || ||| |||||    
T  486548 gcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgtggggtcatg 486645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 2e-60; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 2405793 - 2405990
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    ||||||||||||||||| || | ||||| |||||||||||||||||||||||  ||||| |||| |||||| ||||||||||||||||||||||| | ||    
T  2405793 atgaaaatatacaccaaatcctaaaaatctatcctaaacataaaatactactggtcctggtcctgctgatgttgctggtgcctcctcctcggcctctagc 2405892  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    ||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||  ||||||||||||||||||| ||| |||| ||||    
T  2405893 ctcgcctcctggtcaagatcggcgcgatctgctccgtaacatgggtcatggcctgaaaccactactgagggctcatgacctcctcctggcctaactgc 2405990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 24885416 - 24885572
Alignment:
Q  57 aaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaaca 156  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||| |||||||| ||||||||||| ||| |||||||||| |||||| | |||||||||    
T  24885416 aaaatattactactcctggtcctgctgatgctgctggtgcctccttctcggcctctggcctcgcctcctgctcaagatcggtgcgatccgctccctaaca 24885515  T
Q  157 tgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    |||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  24885516 tgggtcatggcctgaaacaactgctgagggctcatgacctcctcctgacctatctgc 24885572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 2407533 - 2407342
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||||||||| | ||||| |||||||||||||||||||||||  |||||      ||||||||||| ||||||||||||||| || ||||    
T  2407533 atgaaaatatacaccaagtcctaaaaatctatcctaaacataaaatactactggtcctg------ctgatgctgctagtgcctcctcctcggactctggc 2407440  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    ||||||| ||||||||||||| ||||||||| || |||||||||||||| | |||||||||| | ||||||||||||||||||| ||| |||| ||||    
T  2407439 ctcgcctcctggtcaagatcgacgcgatctgctctctaacatgggtcatggtctgaaaccaccggtgagggctcatgacctcctcctggcctaactgc 2407342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 196
Target Start/End: Complemental strand, 26173187 - 26173052
Alignment:
Q  60 atactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgg 159  Q
    ||||||||  ||||| ||||| ||||||||||||||||| ||||||||||| | |||||||||  || ||||||||||||||||||| | ||||| ||||    
T  26173187 atactactggtcctggtcctattgatgctgctggtgccttctcctcggcctctagcctcgcctcatgatcaagatcggcgcgatctgct-cctaagatgg 26173089  T
Q  160 gtcatcgcctgaaaccactgttgagggctcatgacct 196  Q
     |||| |||| ||||||||| ||||||||||||||||    
T  26173088 ctcatggcctaaaaccactgctgagggctcatgacct 26173052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 18001601 - 18001728
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcct 169  Q
    ||||| |||| |||||| || |||||||||||||||||||| |  |||||||| |||| ||| || ||||||||||| || ||||||||| |||| ||||    
T  18001601 tcctggtcctgctgatgttgttggtgcctcctcctcggcctctaacctcgcctcctggccaatattggcgcgatctgctctctaacatggctcatggcct 18001700  T
Q  170 gaaaccactgttgagggctcatgacctc 197  Q
    ||||||| || |||||||||||||||||    
T  18001701 gaaaccattgatgagggctcatgacctc 18001728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 31771308 - 31771201
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| || ||||||||||||||||| ||||||||||| |||||||| ||||||| |||||| ||||||| |||| |||| |||||||||||||| ||||    
T  31771308 tgctgatgttgcctcctcctcggcctctggcctcgcctcctggtcaaaatcggcgtgatctgctccctaatatggctcatggcctgaaaccactgctgag 31771209  T
Q  185 ggctcatg 192  Q
    || |||||    
T  31771208 gggtcatg 31771201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 22304482 - 22304375
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| ||||||||| ||||    
T  22304482 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgag 22304383  T
Q  185 ggctcatg 192  Q
    || |||||    
T  22304382 gggtcatg 22304375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 27639000 - 27638893
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| ||||||||| ||||    
T  27639000 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgag 27638901  T
Q  185 ggctcatg 192  Q
    || |||||    
T  27638900 gggtcatg 27638893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 3384667 - 3384549
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||| |||| |||| ||||| |||||||||||    ||||||||||| ||||| || |||||||||||| |||| |||||||||||||  ||||||||||    
T  3384667 tggtacctcatcctaggcctctggcctcgcctctaagtcaagatcggggcgatttgctccctaacatggctcatggcctgaaaccactactgagggctca 3384568  T
Q  191 tgacctccttctgacctat 209  Q
    ||||||||| |||||||||    
T  3384567 tgacctcctcctgacctat 3384549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 3502237 - 3502142
Alignment:
Q  82 tgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccac 177  Q
    ||||| || |||||| ||||||||||||| ||||||||||| ||||||||||| |||| |||||| ||||||| |||| |||| ||||||||||||    
T  3502237 tgatgttgttggtgcttcctcctcggcctctggcctcgcctcctggtcaagataggcgtgatctgctccctaagatggctcatggcctgaaaccac 3502142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 6204395 - 6204294
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  6204395 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 6204296  T
Q  191 tg 192  Q
    ||    
T  6204295 tg 6204294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 11691362 - 11691261
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  11691362 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 11691263  T
Q  191 tg 192  Q
    ||    
T  11691262 tg 11691261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 30826429 - 30826530
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  30826429 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 30826528  T
Q  191 tg 192  Q
    ||    
T  30826529 tg 30826530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 32641674 - 32641741
Alignment:
Q  90 ctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacat 157  Q
    |||||||||||||||||| || ||||||||||| ||||| | ||||||||||||||| | ||||||||    
T  32641674 ctggtgcctcctcctcggtctctggcctcgcctcctggtaatgatcggcgcgatctgctgcctaacat 32641741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 157
Target Start/End: Complemental strand, 32643155 - 32643068
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacat 157  Q
    ||||| |||| ||| ||||||||||||||||||||| |||| | |||||||||  |||| | ||||||||||||||| | ||||||||    
T  32643155 tcctggtcctgctggtgctgctggtgcctcctcctcagcctctagcctcgcctcatggtaatgatcggcgcgatctgctgcctaacat 32643068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 157
Target Start/End: Original strand, 24085617 - 24085704
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacat 157  Q
    ||||| |||| |||||| |||||||| |||||||||||||| ||||||||||| |  || | ||||||||| ||||| | ||||||||    
T  24085617 tcctggtcctgctgatgttgctggtggctcctcctcggcctctggcctcgcctccaagtaatgatcggcgcaatctgctgcctaacat 24085704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 2e-51; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 51686423 - 51686232
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||||||||| | ||||| |||| ||||||||||||||||||  |||||      |||||| || |||||||||||||||||||| ||||    
T  51686423 atgaaaatatacaccaagtcctaaaaatctatcataaacataaaatactactggtcctg------ctgatgttgttggtgcctcctcctcggcctctggc 51686330  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctgc 213  Q
    |||||||  |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||| |||| ||||    
T  51686329 ctcgcctcatggtcaagatcggcgcgatctgctccctaacatgggtcatggcctaaaaccactgttgagggcttatgacctcctcctggcctaactgc 51686232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 41930801 - 41930944
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||| |||||| | ||| ||||    
T  41930801 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcctggtcctgctgatgctgctggtgccgcctccttgacctctggc 41930900  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgg 159  Q
    ||||||| |||| ||| ||| |||||||||| ||||||||||||    
T  41930901 ctcgcctcctggccaatatcagcgcgatctgctccctaacatgg 41930944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 8110421 - 8110270
Alignment:
Q  61 tactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatggg 160  Q
    |||||||  ||||| |||| |||||||||||||||||||||||||||||| ||||||| ||| |||| ||| |||||||||||||| ||||||||||||     
T  8110421 tactactggtcctggtcctgctgatgctgctggtgcctcctcctcggcctctggcctcccctcctggccaatatcggcgcgatctgctccctaacatggc 8110322  T
Q  161 tcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctg 212  Q
    |||| |||||||||||||  |||| |||||||||||||| ||| || |||||    
T  8110321 tcatggcctgaaaccactactgagagctcatgacctcctcctggcccatctg 8110270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 46439283 - 46439142
Alignment:
Q  61 tactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatggg 160  Q
    |||| ||||||||| |||| ||||| ||||||||||||||||||||| ||       ||||| ||||||||||||| ||||||||| |||||||||||||    
T  46439283 tactgctactcctggtcctgctgatactgctggtgcctcctcctcggtct-------cgcctcctggtcaagatcgacgcgatctgctccctaacatggg 46439191  T
Q  161 tcatcgcctgaaaccactgttgagggctcatgacctccttctgacctat 209  Q
    |||| |||||||||||||||| ||||||||||||||||| |||| ||||    
T  46439190 tcatggcctgaaaccactgttcagggctcatgacctcctcctgatctat 46439142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 14317858 - 14317742
Alignment:
Q  82 tgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgtt 181  Q
    ||||||||||||||||||||||||| ||| ||||||||||| |||| ||| |||||||||||||| || ||||||||| |||| || |||||||| ||||    
T  14317858 tgatgctgctggtgcctcctcctcgtcctctggcctcgcctcctggccaacatcggcgcgatctgctctctaacatggctcatggcttgaaaccattgtt 14317759  T
Q  182 gagggctcatgacctcc 198  Q
    |||||||||||||||||    
T  14317758 gagggctcatgacctcc 14317742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 212
Target Start/End: Original strand, 50020500 - 50020636
Alignment:
Q  76 tcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaacc 175  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||| || ||| ||| |||| |||| ||||||||||    
T  50020500 tcctgctgatgcttctggtgcctcctcctcagcctttggcctcgcctcctggtcaagatcggcgcgatttgctccataagatggctcatggcctgaaacc 50020599  T
Q  176 actgttgagggctcatgacctccttctgacctatctg 212  Q
    |||  ||||||| ||||||||||| ||| || |||||    
T  50020600 actactgagggcccatgacctcctcctggcccatctg 50020636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 50196585 - 50196449
Alignment:
Q  76 tcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaacc 175  Q
    |||| |||||| || || ||||||||||||||||| ||||||| ||| |||||||||||||| |||||||| ||||||| |||| |||| ||||||||||    
T  50196585 tcctgctgatgttgttgatgcctcctcctcggcctctggcctcacctcctggtcaagatcggtgcgatctgctccctaagatggctcatggcctgaaacc 50196486  T
Q  176 actgttgagggctcatgacctccttctgacctatctg 212  Q
    |||||| ||||||||||||||||| ||| || |||||    
T  50196485 actgttaagggctcatgacctcctcctggcccatctg 50196449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 212
Target Start/End: Complemental strand, 50904636 - 50904440
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    ||||||||||||| |||||| | ||||| ||||||||| |||||||||||||| ||||| ||    |  ||||| ||||||||||||||||| |||||||    
T  50904636 atgaaaatatacatcaagtcctaaaaatttatcctaaaaataaaatactactagtcctggtctcggtcctgctgatggtgcctcctcctcggtctttggc 50904537  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatgacctccttctgacctatctg 212  Q
     | |||| ||||  || ||||||||||| || |||||||||||| |||| |||||| ||||||| ||||||| ||||||||||| ||| || |||||    
T  50904536 gttgcctcctggctaatatcggcgcgatatgctccctaacatggctcatggcctgataccactgctgagggcccatgacctcctcctggcccatctg 50904440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 50278385 - 50278271
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||||| ||||| |||||||| |||||| ||||||| ||||| | |||| |||| ||||||||||||||| |||    
T  50278385 tgctgatggtgcctcctcctcggcctctggccccgcctcctggtcaaaatcggctcgatctgctccctcatatggctcatggcctgaaaccactgtagag 50278286  T
Q  185 ggctcatgacctcct 199  Q
    |||||||||||||||    
T  50278285 ggctcatgacctcct 50278271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 198
Target Start/End: Original strand, 10729781 - 10729918
Alignment:
Q  61 tactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatggg 160  Q
    |||||||||||||||||||||||  | || || |||| |||||||||||| ||||||| |||  ||| ||| ||||||| |||||| |||||||||| |     
T  10729781 tactactactcctgatcctactgtagttgttgttgccgcctcctcggcctctggcctcacctcttggccaatatcggcgtgatctggtccctaacatagc 10729880  T
Q  161 tcatcgcctgaaaccactgttgagggctcatgacctcc 198  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  10729881 tcatggcctgaaaccattgttgagggctcatgacctcc 10729918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 198
Target Start/End: Original strand, 10943550 - 10943687
Alignment:
Q  61 tactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatggg 160  Q
    |||||||||||||||||||||||  | || || |||| |||||||||||| ||||||| |||  ||| ||| ||||||| |||||| |||||||||| |     
T  10943550 tactactactcctgatcctactgtagttgttgttgccgcctcctcggcctctggcctcacctcttggccaatatcggcgtgatctggtccctaacatagc 10943649  T
Q  161 tcatcgcctgaaaccactgttgagggctcatgacctcc 198  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  10943650 tcatggcctgaaaccattgttgagggctcatgacctcc 10943687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 21018397 - 21018504
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||| ||||||| |||||||| |||||||||||||| ||||| | ||||||||| |||| ||||||||| ||||    
T  21018397 tgctgatggtgcctcctcctcggcctctgggctcgcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgag 21018496  T
Q  185 ggctcatg 192  Q
    || |||||    
T  21018497 gggtcatg 21018504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 30723546 - 30723653
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| ||||||||| ||||    
T  30723546 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgag 30723645  T
Q  185 ggctcatg 192  Q
    || |||||    
T  30723646 gggtcatg 30723653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 37016409 - 37016516
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||||||||||| || ||||| |||||||||||||| ||||| | || | |||| |||||||||||||| ||||    
T  37016409 tgctgatggtgcctcctcctcggcctctggcctcgccttctagtcaaaatcggcgcgatctgctccctcatattgctcatggcctgaaaccactgctgag 37016508  T
Q  185 ggctcatg 192  Q
    || |||||    
T  37016509 gggtcatg 37016516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 196
Target Start/End: Complemental strand, 72187 - 72072
Alignment:
Q  81 ctgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgt 180  Q
    ||||||||||| ||||||||||||| |||| | |||| |||| |||| ||| |||||| ||||||  || ||||||||| |||| ||||||||||| ||     
T  72187 ctgatgctgctagtgcctcctcctcagcctctagccttgccttctggccaatatcggcacgatctactctctaacatggctcatggcctgaaaccattgc 72088  T
Q  181 tgagggctcatgacct 196  Q
    ||||||||||||||||    
T  72087 tgagggctcatgacct 72072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 41795844 - 41795951
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||| ||||||||| ||| ||| ||| |||||||  |||||||||||||| ||||| | ||||||||| |||| ||||||||||||||    
T  41795844 tgctgatggtgcctccgcctcggcctctgggctctcctcctggtcagaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgttgag 41795943  T
Q  185 ggctcatg 192  Q
    || |||||    
T  41795944 gggtcatg 41795951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 44674656 - 44674743
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccact 178  Q
    |||||||||||||||||||| ||||||||||| || ||||| |||||||||||||| ||||| | |||| |||| |||||||||||||    
T  44674656 tggtgcctcctcctcggcctctggcctcgcctcctagtcaaaatcggcgcgatctgctccctcatatggctcatggcctgaaaccact 44674743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 49168763 - 49168656
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||| ||| ||| |||||||| |||| ||||||||| ||||| | ||||||||| |||| ||||||||| ||||    
T  49168763 tgctgatggtgcctcctcctcggcctatgggctctcctcctggtcaaaatcgacgcgatctgctccctcatatgggtcatggcctcaaaccactgctgag 49168664  T
Q  185 ggctcatg 192  Q
    || |||||    
T  49168663 gggtcatg 49168656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 1305945 - 1306046
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  1305945 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 1306044  T
Q  191 tg 192  Q
    ||    
T  1306045 tg 1306046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 6178615 - 6178716
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  6178615 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 6178714  T
Q  191 tg 192  Q
    ||    
T  6178715 tg 6178716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 199
Target Start/End: Original strand, 21535045 - 21535163
Alignment:
Q  81 ctgatgctgctggtgcctcctcctcggcctttggcctcgcctactg-gtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactg 179  Q
    |||||| || || |||| |||||||||||| |||||| |||| ||| ||||| |||| ||||||||| |||||||||||| |||| |||||||| || ||    
T  21535045 ctgatgttgttgttgccgcctcctcggcctctggccttgcct-ctgtgtcaatatcgacgcgatctgctccctaacatggctcatggcctgaaatcattg 21535143  T
Q  180 ttgagggctcatgacctcct 199  Q
     |||||||||||||||||||    
T  21535144 ctgagggctcatgacctcct 21535163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 40355223 - 40355329
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| | ||| | ||||||||| |||| ||||||||| ||||    
T  40355223 tgctgatggtgcctcctcctcggcctatgggctctcctcctggtcaaaatcggcgcgatctgct-cctcatatgggtcatggcctcaaaccactgctgag 40355321  T
Q  185 ggctcatg 192  Q
    || |||||    
T  40355322 gggtcatg 40355329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 31424986 - 31424885
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| ||||||| |||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  31424986 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgtgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 31424887  T
Q  191 tg 192  Q
    ||    
T  31424886 tg 31424885  T

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Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 49093668 - 49093567
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    ||||||||||||||| |||| ||| ||| ||| |||||||  |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  49093668 tggtgcctcctcctcagcctctgggctctcctcctggtcagaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 49093569  T
Q  191 tg 192  Q
    ||    
T  49093568 tg 49093567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 12892153 - 12892091
Alignment:
Q  84 atgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctg 146  Q
    ||||||||| |||| |||||||||||| ||||||||||| |||||||| |||||| |||||||    
T  12892153 atgctgctgttgccgcctcctcggcctctggcctcgcctcctggtcaatatcggcacgatctg 12892091  T

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Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 30708210 - 30708171
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaaca 55  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  30708210 atgaaaatatacaccaagtaatgaaaatatatcctaaaca 30708171  T

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Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 11081483 - 11081541
Alignment:
Q  118 cgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaacca 176  Q
    ||||| |||||||| ||||||| |||||  ||||||||||||||||| |||||||||||    
T  11081483 cgcctcctggtcaatatcggcgtgatcttctccctaacatgggtcatggcctgaaacca 11081541  T

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Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 40886456 - 40886515
Alignment:
Q  99 cctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatg 158  Q
    |||||||||||| ||| ||||||| |||||||| ||||| || ||||| |||||||||||    
T  40886456 cctcctcggcctctgggctcgcctcctggtcaatatcggtgcaatctgctccctaacatg 40886515  T

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Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 13624332 - 13624402
Alignment:
Q  76 tcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctg 146  Q
    |||| ||| ||||| |||||||||||||||||| | ||||||||||| ||||| | ||||| ||| |||||    
T  13624332 tcctgctggtgctgttggtgcctcctcctcggcatctggcctcgcctcctggtaatgatcgacgcaatctg 13624402  T

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Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 157
Target Start/End: Complemental strand, 7417100 - 7416959
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| ||||    
T  7417100 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctggtcctactgatgttgttggtgcctcctcctcggcctctggc 7417001  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacat 157  Q
    ||||||| ||| | | |||||||||||| || | ||||||||    
T  7417000 ctcgcctcctgataatgatcggcgcgatttgctgcctaacat 7416959  T

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Target: chr2; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 6637866 - 6638011
Alignment:
Q  57 aaaatactactact---cctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatcccta 153  Q
    ||||||||||||||   |||| |||| |||||||||||||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||||    
T  6637866 aaaatactactactggtcctggtcctgctgatgctgctggtgcctcctcctcggcctctggtctcccctcctggtcaatatcggcgcgatctgctcccta 6637965  T
Q  154 acatgggtcatcgcctgaaaccactgttgagggctcatgacctcct 199  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||    
T  6637966 acatggctcatggcctgaaaccactgttgagggctcatgacctcct 6638011  T

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Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 25514799 - 25514931
Alignment:
Q  16 atgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggc 115  Q
    ||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| |||| |||||||||         |||||||||||| ||||    
T  25514799 atgaaaatatacatcaagtcctaaaaatatatcctaaacataaaatactactactcctggtcctgctgatgctg---------cctcctcggcctctggc 25514889  T
Q  116 ctcgcctactggtcaagatcggcgcgatctgatccctaacat 157  Q
    ||||||| |||| ||| |||||||||||||| ||| ||||||    
T  25514890 ctcgcctcctggccaatatcggcgcgatctgctccataacat 25514931  T

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Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 36653303 - 36653409
Alignment:
Q  87 ctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgaggg 186  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||||| ||| |||||| |||| || |||| |||| |||||||||||||| ||||||    
T  36653303 ctgctggtgcctcctcctcggcctctagcctcgcctcctggtcaagatcagcgagatctgctcccaaagatggctcatggcctgaaaccactgctgaggg 36653402  T
Q  187 ctcatga 193  Q
     ||||||    
T  36653403 gtcatga 36653409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 39950744 - 39950633
Alignment:
Q  81 ctgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgt 180  Q
    ||||| |||||||||||||||||||||||| |||  |||||| |||||||| |||||||||||||| ||||| | |||| |||| |||||||| |||||     
T  39950744 ctgatcctgctggtgcctcctcctcggcctctgggttcgcctcctggtcaaaatcggcgcgatctgctccctcatatggctcatggcctgaaatcactgc 39950645  T
Q  181 tgagggctcatg 192  Q
    |||||| |||||    
T  39950644 tgaggggtcatg 39950633  T

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Target: chr2; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 29398389 - 29398517
Alignment:
Q  64 tactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtca 163  Q
    ||||||| ||||||||  |  ||||| |||||||||||||||||||| ||||||| ||| |||||||| ||||||  ||| || ||||| | |||| |||    
T  29398389 tactactactgatcctggtcctgctgatggtgcctcctcctcggcctctggcctcacctcctggtcaaaatcggcatgatatgctccctcatatggctca 29398488  T
Q  164 tcgcctgaaaccactgttgagggctcatg 192  Q
    | ||||||||||||||||||||| |||||    
T  29398489 tggcctgaaaccactgttgaggggtcatg 29398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 157
Target Start/End: Complemental strand, 40538789 - 40538702
Alignment:
Q  70 tcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacat 157  Q
    ||||| |||| || ||||||||||||||||||||||||||| ||||||||||||||||| | |||||| |||||||| | ||||||||    
T  40538789 tcctggtcctgcttatgctgctggtgcctcctcctcggcctctggcctcgcctactggtaatgatcggtgcgatctgctgcctaacat 40538702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 30493772 - 30493873
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  30493772 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 30493871  T
Q  191 tg 192  Q
    ||    
T  30493872 tg 30493873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 17423706 - 17423599
Alignment:
Q  85 tgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgag 184  Q
    ||||| |||||||||| ||||||||| ||| ||| ||| |||||||  |||||||||||||| ||||| | ||||||||| |||| ||||||||| ||||    
T  17423706 tgctgatggtgcctccgcctcggcctctgggctctcctcctggtcagaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgag 17423607  T
Q  185 ggctcatg 192  Q
    || |||||    
T  17423606 gggtcatg 17423599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 28471803 - 28471673
Alignment:
Q  64 tactactcctgatcctactgatgctgctggtgcctcctcctcggcctttggcctcgcctac--tggtcaagatcggcgcgatctgatccctaacatgggt 161  Q
    ||||||| ||| ||||| |  ||||| |||||||||||||||||||| ||| ||||||| |  | ||||| |||||||||||||| ||||| | ||||||    
T  28471803 tactactactggtcctaatcctgctgatggtgcctcctcctcggcctctgggctcgcctccctttgtcaaaatcggcgcgatctgctccctcatatgggt 28471704  T
Q  162 catcgcctgaaaccactgttgagggctcatg 192  Q
    ||| |||| ||||||||| |||||| |||||    
T  28471703 catggcctcaaaccactgctgaggggtcatg 28471673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 10825732 - 10825830
Alignment:
Q  94 tgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctcatg 192  Q
    ||||||||||||||||| ||| ||||||| |||||||| |||  ||||||||| ||||| | |||| |||| |||||||||||||| |||||| |||||    
T  10825732 tgcctcctcctcggcctctggtctcgcctcctggtcaaaatcaacgcgatctgctccctcatatggctcatggcctgaaaccactgctgaggggtcatg 10825830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 15834502 - 15834401
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | |||||| || |||| |||| |||| |||||| |||    
T  15834502 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggttatggcctcaaacgactgctgaggggtca 15834403  T
Q  191 tg 192  Q
    ||    
T  15834402 tg 15834401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 43536515 - 43536616
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    ||||||||||||||| |||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  43536515 tggtgcctcctcctcagcctctggactctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 43536614  T
Q  191 tg 192  Q
    ||    
T  43536615 tg 43536616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 43981767 - 43981666
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    ||||| |||||||||||||| ||| ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  43981767 tggtgtctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 43981668  T
Q  191 tg 192  Q
    ||    
T  43981667 tg 43981666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 5355217 - 5355116
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccctaacatgggtcatcgcctgaaaccactgttgagggctca 190  Q
    ||||||||| |||||||||| | | ||| ||| |||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||| |||||| |||    
T  5355217 tggtgcctcatcctcggcctctaggctctcctcctggtcaaaatcggcgcgatctgctcccttatatgggtcatggcctcataccactgctgaggggtca 5355118  T
Q  191 tg 192  Q
    ||    
T  5355117 tg 5355116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 3938350 - 3938411
Alignment:
Q  91 tggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctgatccct 152  Q
    |||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||| |||||    
T  3938350 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccct 3938411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 12603 - 12538
Alignment:
Q  81 ctgatgctgctggtgcctcctcctcggcctttggcctcgcctactggtcaagatcggcgcgatctg 146  Q
    |||||||||||||||||||||||||||||| || ||||||||  |||| | |||||||||||||||    
T  12603 ctgatgctgctggtgcctcctcctcggcctctgccctcgcctcttggtaatgatcggcgcgatctg 12538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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