View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17990_low_11 (Length: 514)

Name: NF17990_low_11
Description: NF17990
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17990_low_11
NF17990_low_11
[»] chr5 (46 HSPs)
chr5 (14-278)||(7286376-7286636)
chr5 (14-159)||(20995244-20995389)
chr5 (14-159)||(2195860-2196005)
chr5 (14-159)||(21030831-21030976)
chr5 (14-229)||(20350657-20350867)
chr5 (14-230)||(17997290-17997503)
chr5 (14-159)||(30690029-30690174)
chr5 (14-159)||(41781639-41781784)
chr5 (14-164)||(26320447-26320597)
chr5 (14-159)||(3149956-3150101)
chr5 (14-229)||(27066594-27066805)
chr5 (14-156)||(33610518-33610660)
chr5 (15-164)||(19448718-19448867)
chr5 (30-229)||(10511664-10511859)
chr5 (14-154)||(287084-287222)
chr5 (14-159)||(20758667-20758812)
chr5 (14-159)||(34373735-34373880)
chr5 (14-159)||(3029476-3029621)
chr5 (15-154)||(12419935-12420073)
chr5 (14-156)||(33706125-33706266)
chr5 (14-125)||(1851346-1851457)
chr5 (30-155)||(38935188-38935313)
chr5 (30-156)||(30142270-30142396)
chr5 (14-156)||(34726749-34726890)
chr5 (14-156)||(35539279-35539421)
chr5 (34-156)||(25696909-25697031)
chr5 (39-156)||(34717366-34717483)
chr5 (39-156)||(41691052-41691169)
chr5 (424-502)||(7510109-7510187)
chr5 (28-229)||(33930966-33931156)
chr5 (71-229)||(4882959-4883113)
chr5 (109-228)||(19395580-19395695)
chr5 (81-159)||(3396501-3396581)
chr5 (109-159)||(31295619-31295669)
chr5 (180-229)||(34373668-34373717)
chr5 (185-228)||(34725259-34725302)
chr5 (186-229)||(36884780-36884823)
chr5 (180-226)||(2196022-2196068)
chr5 (187-229)||(5620643-5620685)
chr5 (187-229)||(9702709-9702751)
chr5 (180-226)||(20758830-20758876)
chr5 (180-226)||(21030993-21031039)
chr5 (191-228)||(31295552-31295589)
chr5 (186-231)||(34719457-34719502)
chr5 (180-229)||(35539209-35539258)
chr5 (180-229)||(38935341-38935390)
[»] chr8 (56 HSPs)
chr8 (14-229)||(14078129-14078340)
chr8 (14-159)||(33423624-33423769)
chr8 (14-159)||(22332069-22332214)
chr8 (14-159)||(19394904-19395049)
chr8 (14-159)||(9761745-9761890)
chr8 (14-159)||(23522002-23522147)
chr8 (14-236)||(27273709-27273927)
chr8 (14-159)||(36597377-36597522)
chr8 (14-228)||(42785646-42785856)
chr8 (14-159)||(19248629-19248773)
chr8 (14-159)||(19321813-19321957)
chr8 (14-156)||(44382141-44382282)
chr8 (14-159)||(7015652-7015795)
chr8 (30-156)||(41629393-41629519)
chr8 (14-152)||(45291835-45291972)
chr8 (14-159)||(30826868-30827013)
chr8 (18-155)||(38962685-38962822)
chr8 (14-159)||(38994185-38994330)
chr8 (14-159)||(44600201-44600346)
chr8 (14-156)||(41978006-41978147)
chr8 (14-155)||(3751609-3751749)
chr8 (39-156)||(12760753-12760870)
chr8 (18-156)||(4465837-4465974)
chr8 (14-229)||(5836073-5836282)
chr8 (14-156)||(25345044-25345185)
chr8 (18-156)||(41533200-41533337)
chr8 (31-156)||(7389748-7389873)
chr8 (18-156)||(25615873-25616010)
chr8 (18-120)||(6476874-6476976)
chr8 (14-158)||(22946145-22946282)
chr8 (14-156)||(25620147-25620288)
chr8 (14-94)||(41157103-41157183)
chr8 (14-79)||(42810362-42810427)
chr8 (105-159)||(6300552-6300606)
chr8 (104-159)||(42060730-42060785)
chr8 (109-159)||(44940444-44940494)
chr8 (109-159)||(37029840-37029890)
chr8 (180-229)||(19394838-19394887)
chr8 (180-229)||(30827029-30827078)
chr8 (180-229)||(36597311-36597360)
chr8 (186-229)||(24055840-24055883)
chr8 (186-229)||(25361514-25361557)
chr8 (121-156)||(41157180-41157215)
chr8 (191-229)||(6300488-6300526)
chr8 (187-229)||(12249911-12249953)
chr8 (187-229)||(23626055-23626097)
chr8 (109-159)||(23966455-23966505)
chr8 (191-229)||(37029919-37029957)
chr8 (187-229)||(39445254-39445296)
chr8 (191-229)||(42060661-42060699)
chr8 (180-229)||(22332004-22332053)
chr8 (191-228)||(23966383-23966420)
chr8 (191-232)||(27272690-27272731)
chr8 (191-228)||(44940522-44940559)
chr8 (191-231)||(2961006-2961046)
chr8 (192-228)||(29434278-29434314)
[»] chr4 (45 HSPs)
chr4 (14-159)||(22115420-22115565)
chr4 (14-159)||(53343185-53343330)
chr4 (14-229)||(38009039-38009250)
chr4 (14-229)||(5271601-5271812)
chr4 (14-230)||(21353795-21354007)
chr4 (14-156)||(39742367-39742509)
chr4 (15-229)||(2777054-2777264)
chr4 (14-224)||(33502309-33502515)
chr4 (24-229)||(54331069-54331270)
chr4 (14-229)||(41983531-41983742)
chr4 (14-159)||(14828903-14829048)
chr4 (14-159)||(23479654-23479799)
chr4 (14-159)||(36514709-36514854)
chr4 (14-155)||(19109130-19109271)
chr4 (14-159)||(34055955-34056100)
chr4 (14-157)||(19830768-19830911)
chr4 (14-159)||(55998081-55998226)
chr4 (14-229)||(28973839-28974052)
chr4 (18-156)||(17699956-17700094)
chr4 (14-156)||(17740822-17740963)
chr4 (14-156)||(47556794-47556935)
chr4 (39-159)||(15642428-15642548)
chr4 (14-229)||(35494908-35495115)
chr4 (14-159)||(37700967-37701111)
chr4 (14-159)||(13628831-13628973)
chr4 (14-156)||(2116608-2116750)
chr4 (14-156)||(46104682-46104823)
chr4 (39-156)||(39714913-39715030)
chr4 (30-229)||(36857848-36858044)
chr4 (30-159)||(7643174-7643302)
chr4 (39-156)||(52800801-52800918)
chr4 (22-156)||(40622937-40623068)
chr4 (31-156)||(12682171-12682296)
chr4 (100-159)||(28134771-28134830)
chr4 (109-159)||(740372-740422)
chr4 (180-228)||(14828803-14828851)
chr4 (109-159)||(15520993-15521043)
chr4 (180-229)||(22115353-22115402)
chr4 (180-229)||(23479817-23479866)
chr4 (186-229)||(39404591-39404634)
chr4 (191-229)||(15521073-15521111)
chr4 (180-229)||(19830699-19830748)
chr4 (180-229)||(28134707-28134756)
chr4 (180-229)||(34055890-34055938)
chr4 (191-231)||(15650483-15650523)
[»] chr3 (44 HSPs)
chr3 (14-159)||(21698941-21699086)
chr3 (14-159)||(50770624-50770769)
chr3 (14-159)||(18741582-18741727)
chr3 (14-156)||(8243263-8243405)
chr3 (14-164)||(19406686-19406836)
chr3 (14-159)||(31368393-31368538)
chr3 (14-159)||(23194953-23195098)
chr3 (30-229)||(35087162-35087358)
chr3 (14-156)||(6103501-6103643)
chr3 (14-159)||(51249059-51249204)
chr3 (14-231)||(52462212-52462425)
chr3 (14-229)||(54934566-54934776)
chr3 (14-159)||(54648245-54648390)
chr3 (16-156)||(52842345-52842484)
chr3 (14-159)||(54513545-54513691)
chr3 (14-229)||(50742128-50742338)
chr3 (14-156)||(48520393-48520534)
chr3 (30-229)||(49113824-49114019)
chr3 (14-228)||(32756274-32756477)
chr3 (14-156)||(39093086-39093227)
chr3 (14-156)||(40824023-40824163)
chr3 (14-229)||(52852743-52852954)
chr3 (14-156)||(55294134-55294275)
chr3 (14-156)||(4138140-4138281)
chr3 (14-159)||(2839580-2839725)
chr3 (14-156)||(26777286-26777427)
chr3 (14-151)||(16342411-16342545)
chr3 (86-159)||(19353698-19353771)
chr3 (81-156)||(11597376-11597451)
chr3 (111-155)||(48988911-48988955)
chr3 (109-159)||(5252321-5252371)
chr3 (109-154)||(39796425-39796470)
chr3 (180-231)||(16342571-16342622)
chr3 (30-106)||(48977676-48977754)
chr3 (180-229)||(6103432-6103481)
chr3 (180-228)||(50770559-50770607)
chr3 (186-229)||(26776433-26776476)
chr3 (187-229)||(21165930-21165972)
chr3 (180-229)||(31368326-31368376)
chr3 (14-56)||(53801027-53801068)
chr3 (180-230)||(54513708-54513758)
chr3 (191-228)||(5252254-5252291)
chr3 (180-229)||(19353788-19353837)
chr3 (187-228)||(22522271-22522312)
[»] chr2 (37 HSPs)
chr2 (14-228)||(26822388-26822598)
chr2 (14-229)||(5253125-5253337)
chr2 (14-159)||(36632401-36632546)
chr2 (14-232)||(45399583-45399797)
chr2 (14-159)||(19167214-19167359)
chr2 (14-159)||(42886172-42886316)
chr2 (15-159)||(19126065-19126209)
chr2 (14-231)||(16723659-16723873)
chr2 (14-229)||(45204294-45204505)
chr2 (14-159)||(21098457-21098602)
chr2 (14-159)||(11448526-11448671)
chr2 (14-229)||(33908022-33908234)
chr2 (14-159)||(4812319-4812467)
chr2 (14-159)||(33663122-33663266)
chr2 (14-228)||(11707405-11707615)
chr2 (14-229)||(26828290-26828502)
chr2 (14-164)||(30569901-30570049)
chr2 (14-156)||(1514340-1514481)
chr2 (30-156)||(10048385-10048511)
chr2 (30-156)||(18092089-18092215)
chr2 (34-156)||(9544008-9544130)
chr2 (39-156)||(4291042-4291159)
chr2 (14-230)||(35285582-35285787)
chr2 (14-78)||(27364267-27364331)
chr2 (96-159)||(27364207-27364270)
chr2 (110-228)||(18137828-18137942)
chr2 (99-156)||(28608446-28608503)
chr2 (109-159)||(6342792-6342842)
chr2 (109-159)||(14323276-14323326)
chr2 (109-159)||(1993017-1993067)
chr2 (109-159)||(28502444-28502494)
chr2 (186-229)||(9542629-9542672)
chr2 (186-229)||(42782673-42782716)
chr2 (186-228)||(9916707-9916749)
chr2 (191-228)||(1992950-1992987)
chr2 (180-229)||(19167149-19167197)
chr2 (186-230)||(4289026-4289070)
[»] scaffold0121 (1 HSPs)
scaffold0121 (15-230)||(14617-14828)
[»] chr6 (35 HSPs)
chr6 (14-229)||(18598304-18598515)
chr6 (14-159)||(18312530-18312675)
chr6 (14-156)||(33320814-33320955)
chr6 (14-159)||(34856669-34856814)
chr6 (14-159)||(1072648-1072793)
chr6 (14-159)||(14887323-14887468)
chr6 (14-159)||(33814708-33814853)
chr6 (14-159)||(17940260-17940405)
chr6 (14-159)||(35041828-35041972)
chr6 (14-154)||(35158715-35158854)
chr6 (14-152)||(11932874-11933012)
chr6 (14-159)||(21800258-21800403)
chr6 (14-159)||(22373205-22373350)
chr6 (14-156)||(14832228-14832369)
chr6 (14-159)||(15276376-15276521)
chr6 (14-156)||(4108470-4108611)
chr6 (14-159)||(4425226-4425362)
chr6 (14-156)||(25540684-25540825)
chr6 (30-159)||(34321844-34321973)
chr6 (39-156)||(1220294-1220411)
chr6 (42-159)||(7223067-7223184)
chr6 (39-156)||(24445703-24445820)
chr6 (39-156)||(9979455-9979572)
chr6 (87-230)||(2521928-2522067)
chr6 (180-229)||(22323780-22323829)
chr6 (180-229)||(25540842-25540891)
chr6 (14-58)||(2521884-2521928)
chr6 (191-229)||(13456734-13456772)
chr6 (109-159)||(13456800-13456850)
chr6 (180-230)||(21800420-21800470)
chr6 (180-229)||(11932801-11932850)
chr6 (180-229)||(15276536-15276585)
chr6 (180-229)||(22373139-22373188)
chr6 (180-229)||(35041990-35042039)
chr6 (180-228)||(33814870-33814918)
[»] chr1 (38 HSPs)
chr1 (14-233)||(31620430-31620645)
chr1 (15-159)||(38844539-38844683)
chr1 (14-156)||(34692856-34692998)
chr1 (14-156)||(34688328-34688470)
chr1 (14-163)||(16030947-16031096)
chr1 (14-229)||(44407124-44407336)
chr1 (14-153)||(41829421-41829560)
chr1 (14-156)||(47136043-47136184)
chr1 (15-156)||(52520985-52521126)
chr1 (14-156)||(18814960-18815102)
chr1 (14-159)||(17672220-17672365)
chr1 (14-159)||(48341084-48341229)
chr1 (26-229)||(45005550-45005748)
chr1 (14-156)||(52310603-52310744)
chr1 (14-156)||(5426744-5426885)
chr1 (14-156)||(10694146-10694287)
chr1 (26-159)||(36682819-36682952)
chr1 (14-156)||(16300810-16300952)
chr1 (30-156)||(51965201-51965328)
chr1 (14-163)||(50561818-50561964)
chr1 (39-156)||(4891876-4891993)
chr1 (39-156)||(29186494-29186611)
chr1 (39-156)||(33361479-33361596)
chr1 (14-159)||(41962301-41962437)
chr1 (14-229)||(12245171-12245375)
chr1 (30-140)||(17707267-17707377)
chr1 (109-159)||(24294795-24294845)
chr1 (109-159)||(39760084-39760134)
chr1 (109-159)||(43254619-43254669)
chr1 (109-159)||(50395033-50395083)
chr1 (180-228)||(24294862-24294910)
chr1 (187-229)||(28631811-28631853)
chr1 (191-229)||(50394966-50395004)
chr1 (180-229)||(38844473-38844522)
chr1 (186-231)||(38896814-38896859)
chr1 (191-228)||(43254555-43254592)
chr1 (186-230)||(29840688-29840732)
chr1 (186-233)||(43118936-43118981)
[»] chr7 (41 HSPs)
chr7 (16-150)||(5963447-5963581)
chr7 (14-229)||(8925225-8925436)
chr7 (14-159)||(17470491-17470636)
chr7 (14-159)||(17582578-17582723)
chr7 (14-159)||(42688314-42688459)
chr7 (14-159)||(33031617-33031762)
chr7 (14-159)||(42918629-42918773)
chr7 (14-159)||(47175225-47175370)
chr7 (15-156)||(23299080-23299220)
chr7 (14-156)||(33638031-33638172)
chr7 (30-159)||(19521912-19522041)
chr7 (15-156)||(49145649-49145789)
chr7 (27-159)||(14309618-14309750)
chr7 (14-156)||(27734408-27734547)
chr7 (14-140)||(9150089-9150215)
chr7 (14-156)||(4848863-4849004)
chr7 (14-159)||(11500619-11500757)
chr7 (30-156)||(39649341-39649467)
chr7 (14-159)||(42826711-42826854)
chr7 (34-156)||(48528151-48528273)
chr7 (39-156)||(17170802-17170919)
chr7 (34-155)||(31898183-31898304)
chr7 (14-132)||(23765847-23765965)
chr7 (14-94)||(17478673-17478753)
chr7 (14-94)||(17574461-17574541)
chr7 (14-94)||(17483108-17483188)
chr7 (14-94)||(17570026-17570106)
chr7 (186-228)||(4850452-4850494)
chr7 (109-159)||(6911426-6911476)
chr7 (187-229)||(42996941-42996983)
chr7 (109-159)||(47573404-47573454)
chr7 (180-241)||(17470654-17470715)
chr7 (180-241)||(17582499-17582560)
chr7 (187-228)||(23476587-23476628)
chr7 (187-229)||(9226020-9226062)
chr7 (187-229)||(38434277-38434319)
chr7 (191-229)||(47573332-47573370)
chr7 (191-228)||(6911359-6911396)
chr7 (191-232)||(12960611-12960652)
chr7 (180-229)||(42826646-42826695)
chr7 (180-228)||(47175387-47175435)
[»] scaffold1634 (1 HSPs)
scaffold1634 (14-159)||(387-532)
[»] scaffold0047 (2 HSPs)
scaffold0047 (14-159)||(25714-25859)
scaffold0047 (180-228)||(25614-25662)
[»] scaffold0016 (2 HSPs)
scaffold0016 (18-159)||(101475-101616)
scaffold0016 (180-226)||(101634-101680)
[»] scaffold0005 (2 HSPs)
scaffold0005 (14-159)||(10661-10806)
scaffold0005 (180-228)||(10858-10906)
[»] scaffold0171 (1 HSPs)
scaffold0171 (14-229)||(29638-29848)
[»] scaffold1891 (1 HSPs)
scaffold1891 (14-159)||(161-306)
[»] scaffold0122 (1 HSPs)
scaffold0122 (14-159)||(5231-5376)
[»] scaffold0242 (1 HSPs)
scaffold0242 (14-229)||(2708-2919)
[»] scaffold0045 (2 HSPs)
scaffold0045 (14-156)||(12282-12423)
scaffold0045 (180-229)||(12213-12262)
[»] scaffold0010 (1 HSPs)
scaffold0010 (14-164)||(120666-120815)
[»] scaffold0079 (1 HSPs)
scaffold0079 (14-155)||(10090-10230)
[»] scaffold0032 (2 HSPs)
scaffold0032 (14-155)||(4322-4462)
scaffold0032 (14-155)||(10771-10911)
[»] scaffold0110 (1 HSPs)
scaffold0110 (15-228)||(48526-48735)
[»] scaffold0115 (1 HSPs)
scaffold0115 (17-155)||(3178-3314)
[»] scaffold0069 (1 HSPs)
scaffold0069 (39-156)||(13509-13626)
[»] scaffold0057 (1 HSPs)
scaffold0057 (39-156)||(18774-18891)
[»] scaffold0169 (1 HSPs)
scaffold0169 (86-159)||(16982-17055)
[»] scaffold0009 (1 HSPs)
scaffold0009 (110-156)||(231820-231866)
[»] scaffold0484 (1 HSPs)
scaffold0484 (186-229)||(8175-8218)
[»] scaffold0027 (1 HSPs)
scaffold0027 (191-230)||(143212-143251)
[»] scaffold0088 (1 HSPs)
scaffold0088 (187-229)||(52692-52734)


Alignment Details
Target: chr5 (Bit Score: 167; Significance: 3e-89; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 7286376 - 7286636
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||  ||||    
T  7286376 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcacaaactgattatatgctctcttaatcagctcata 7286475  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| |||        |    |  |||||||||||||||||||||  | | |||||||    
T  7286476 catattttatgatgaatcacaatattccgtcgttttaacatctcttctttcaaagattt----tttttatcgaatatgttattgaactcgcgcgaagcac 7286571  T
Q  214 gggtttgtaactagttgatagaagaaaagaaatgcataaatatgaagaaaagcatttacattgat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7286572 gggtttgtaactagttgatagaagaaaagaaatgcataaatatgaagaaaagcatttacattgat 7286636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 20995389 - 20995244
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  20995389 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctcttttaatcagtccata 20995290  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  20995289 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 20995244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 2195860 - 2196005
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  2195860 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccata 2195959  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2195960 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 2196005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 21030831 - 21030976
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||||||||| |||||    
T  21030831 catcattggttcctttattagttccaattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgctctcttaatcagcccata 21030930  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  21030931 catattttatgatgaatcacaatgttctgttgttttaacatctctt 21030976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 20350657 - 20350867
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| | |||||||||||||||||||| |||||    
T  20350657 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgcttatatgctctcttaatcagcccata 20350756  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| ||||||||| |||| ||| |||          || || || || |||| ||||||||||| ||| |||||||    
T  20350757 catattttatgatgaatcacaatgttccgtcgttttagcatcacttctttcaaag-----aattatttttcaaatacgttattgaacccgtgcgaagcac 20350851  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  20350852 gggtttgtaactagtt 20350867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 230
Target Start/End: Original strand, 17997290 - 17997503
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||| ||||  |||||||||||||||||||||  ||||    
T  17997290 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaatttcgaatctcataaactaattatatgctctcttaatcagcacata 17997389  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||        |    |  |||||||||| ||||||||||| ||| |||||||    
T  17997390 catattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcaaagaatt---ttttttatcgaatacgttattgaacccgtgcgaagcac 17997486  T
Q  214 gggtttgtaactagttg 230  Q
    |||||||||||||||||    
T  17997487 gggtttgtaactagttg 17997503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 30690029 - 30690174
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  30690029 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagtccata 30690128  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||    
T  30690129 catattttatgatgaatcacgatgttccttcgttttaacatctctt 30690174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 41781639 - 41781784
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| |||| ||||| ||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  41781639 catcattgtttcctttattggttccaattattttcttcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagtccata 41781738  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  41781739 catattttatgatgaatcacaatgttccgtcattttaacatctctt 41781784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 26320597 - 26320447
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| || |||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  26320597 catcattgatttctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcaggccata 26320498  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttatttt 164  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  26320497 catattttatgatgaatcacaatgttccgtcgttttaacatatcttctttt 26320447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 3150101 - 3149956
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||| |||| |||||||||||||||||||||| |||||    
T  3150101 catcattggttcctttattggttccaattgttttcattctaaatattatgtcaattccttatctcataaactgattatatgctctcttaatcagcccata 3150002  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||   |||||||||||||||||    
T  3150001 catattttatgatgaatcacaatgttaattcgttttaacatctctt 3149956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 27066594 - 27066805
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||||| |||| |||||||||||||||||||||||| |||    
T  27066594 catcattggttcctttattggttccaattgttttcatcctaaatattatattaattcctaatctcataaactgattatatgctctcttaatcagtctata 27066693  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    |||||||||||||||||||||||||||  |||||||| |||||||| |||        |    |  |||||||||| |||| ||||| ||||||||||||    
T  27066694 catattttatgatgaatcacaatgttccatcgttttaccatctcttctttcgaagattt----tttttatcgaatacgttactgaacatgtgtgaagcac 27066789  T
Q  214 gggtttgtaactagtt 229  Q
    | ||||||||||||||    
T  27066790 gagtttgtaactagtt 27066805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 33610660 - 33610518
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| |||| ||||||||||||||||||||||  ||||    
T  33610660 catcattggttcctttattggttccaattgttttcatcttaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagctcata 33610561  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    | |||||||||| |||||||||||||| |||||||||||||||    
T  33610560 cgtattttatgacgaatcacaatgttccgtcgttttaacatct 33610518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 19448718 - 19448867
Alignment:
Q  15 atcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatac 114  Q
    |||||| |||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||| | |||| ||||||||||||||||||||| |||||||    
T  19448718 atcattagttcatttattggttccaattgttttcatcctaaatattatgtcaattcataatcttataaactgattatatgctctcttaatcaatccatac 19448817  T
Q  115 atattttatgatgaatcacaatgttctgtcgttttaacatctcttatttt 164  Q
    |||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  19448818 atattttatgatgaatcacaatattccgtcgttttaacatctcttctttt 19448867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 30 - 229
Target Start/End: Complemental strand, 10511859 - 10511664
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaa 129  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||| |||||||||||| |||||||||||||||||||||    
T  10511859 attggttccaattgttttcatcctaaatattatgtcaattactaatctcataaactgattatatgttctcttaatcagcccatacatattttatgatgaa 10511760  T
Q  130 tcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||||  ||||||||||||||||| |||         ||  |  |||||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  10511759 tcacaatgttccatcgttttaacatctcttcttt----cgaagaatttttttatcgaatacgttattgaacccgtgtgaagcacgagtttgtaactagtt 10511664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 287222 - 287084
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||||||  ||||    
T  287222 catcattggttccttt--tggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctcttaatcagctcata 287125  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacat 154  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  287124 catattttatgatgaatcacaatgttccgtcgttttaacat 287084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 20758667 - 20758812
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| || |||||||||| |||||| ||||| |||| ||||||||| ||||  |||||||||||||||||||||  ||||    
T  20758667 catcattggttcctttattggttccaactgttttcatcataaatattatgttaatttctaatctcataaactaattatatgctctcttaatcagcacata 20758766  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  20758767 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 20758812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 34373880 - 34373735
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||  || ||||| |||| ||||||||||||||||||||||  ||||    
T  34373880 catcattggtttctttattggttccaattgttttcatcctaaatattatgtcaatttgtattctcataaactgattatatgctctcttaatcagctcata 34373781  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  34373780 catattttatgatgaatcacaatattccgtcgttttaacatctctt 34373735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 3029476 - 3029621
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| ||| ||||  |||||||||||||||||||||  ||||    
T  3029476 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaatttctaatttcataaactaattatatgctctcttaatcagctcata 3029575  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||| |||  |||||||||||| ||||    
T  3029576 catattttatgatgaatcacaatattccttcgttttaacatttctt 3029621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 154
Target Start/End: Complemental strand, 12420073 - 12419935
Alignment:
Q  15 atcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatac 114  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| |||||| ||||||    
T  12420073 atcattggttccttt-ttggttccaattattttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagcccatac 12419975  T
Q  115 atattttatgatgaatcacaatgttctgtcgttttaacat 154  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  12419974 atattttatgatgaatcaaaatgttccgtcgttttaacat 12419935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 33706266 - 33706125
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||| ||| |||||||||||||||| |||| ||||||||| ||||| ||||||  ||||    
T  33706266 catcattggttccttttttg-ttccaattgttttcatcctaaatattatctcaattcctaatctcataaactgattatatgatctctaaatcagctcata 33706168  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  33706167 catattttatgatgaatcacaatgttccgtcgttttaacatct 33706125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 1851457 - 1851346
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| | |||    
T  1851457 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcctata 1851358  T
Q  114 catattttatga 125  Q
    ||||||||||||    
T  1851357 catattttatga 1851346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 30 - 155
Target Start/End: Original strand, 38935188 - 38935313
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaa 129  Q
    |||||||| ||| |||||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||   ||||||||||||||||||||    
T  38935188 attggttccaatcgttttcatcctaaatattatgtcaattcataatctcataaactgattatatgctctcttaatcaactcatacatattttatgatgaa 38935287  T
Q  130 tcacaatgttctgtcgttttaacatc 155  Q
    ||||||||||| ||||||||||||||    
T  38935288 tcacaatgttccgtcgttttaacatc 38935313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 30142270 - 30142396
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaa 129  Q
    |||||||  |||| ||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| ||||||  ||||||||||||||||||||    
T  30142270 attggtttcaattattttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaa 30142369  T
Q  130 tcacaatgttctgtcgttttaacatct 156  Q
    |||||||||||||| ||||||||||||    
T  30142370 tcacaatgttctgttgttttaacatct 30142396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 34726890 - 34726749
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||| ||| |||||||||||||||||| | |||||||||| ||||||||| |||| | ||||||| ||||| |||||| |||||    
T  34726890 catcattggttccttttttg-ttccaattgttttcatcctaaacattatgtcaatttctaatctcataaactgtttatatgatctctaaatcagcccata 34726792  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  34726791 catattttatgatgaatcacaatgttccgttgttttaacatct 34726749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 35539421 - 35539279
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||  || ||||| |||  ||||||||||||||||||| ||  ||||    
T  35539421 catcattggtttctttattggttccaattgttttcatcctaaatattatgtcaatttgtattctcataaattgattatatgctctcttaattagctcata 35539322  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||    
T  35539321 catattttatgatgagtcacaatgttccgtcgttttaatatct 35539279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 25697031 - 25696909
Alignment:
Q  34 gttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcac 133  Q
    |||| |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  ||||||||||||| ||||||||||    
T  25697031 gttccaattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttaggatgaatcac 25696932  T
Q  134 aatgttctgtcgttttaacatct 156  Q
    ||||||| || ||||||||||||    
T  25696931 aatgttccgttgttttaacatct 25696909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 34717366 - 34717483
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||| ||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  34717366 aattgttttcattctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcacaatgt 34717465  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  34717466 tccgttgttttaacatct 34717483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 41691052 - 41691169
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||| ||||| | |||||||||| ||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  41691052 aattgttttcattctaaaaattatgtcaatttctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcacaatgt 41691151  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  41691152 tccgttgttttaacatct 41691169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 424 - 502
Target Start/End: Original strand, 7510109 - 7510187
Alignment:
Q  424 cccacttcatcagattccatcaatccaaatatagcctagatgatgtatatattaaacttagactttgttagaattatct 502  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||    
T  7510109 cccacttcatcagattccatcaatccaaacatagcctaaatgatgtatatattaagcttagactttgttagaattatct 7510187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 229
Target Start/End: Original strand, 33930966 - 33931156
Alignment:
Q  28 ttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatg 127  Q
    |||||||||  ||||||||||||| |||||| |||||||| |  |||||||| ||||  |       ||||||||||||| |||||||||||||||||||    
T  33930966 ttattggtttcaattgttttcatcataaatattatgtcaaattataatctcataaactaa-------ctctcttaatcagcccatacatattttatgatg 33931058  T
Q  128 aatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactag 227  Q
    ||||| ||||||| ||| |||||||||||||| |||         ||  |  ||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  33931059 aatcagaatgttccgtcattttaacatctcttcttt----cgaagaatttttttatcgaatatattattgaacccgtgcgaagcacgggtttgtaactag 33931154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 4882959 - 4883113
Alignment:
Q  71 ctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnn 170  Q
    ||||||||| |||| |||||||||||||||||| ||| |  ||||||||||| |||||| |||||||||| |||||||||||||||||| |||           
T  4882959 ctaatctcataaactgattatatgctctcttaaccagcctttacatattttacgatgaagcacaatgttccgtcgttttaacatctcttcttt----caa 4883054  T
Q  171 ntaaaataattatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
      ||  |  | |||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  4883055 agaattttttcatcgaatacgttattgaacccgtgcgaagcacgggtttgtaactagtt 4883113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 228
Target Start/End: Original strand, 19395580 - 19395695
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtga 208  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||       |    |  ||||| |||| ||||||||||| ||| ||    
T  19395580 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttcttttgaagattt----tttttatcaaatacgttattgaacccgtgcga 19395675  T
Q  209 agcacgggtttgtaactagt 228  Q
    ||||||||||||||||||||    
T  19395676 agcacgggtttgtaactagt 19395695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 3396581 - 3396501
Alignment:
Q  81 aaacagattatatgctctcttaatcagtccatacatattttatgatg--aatcacaatgttctgtcgttttaacatctctt 159  Q
    |||| ||||||||||||||||||| |  |||| ||||||||||||||  |||||||||||||||| |||||||||||||||    
T  3396581 aaactgattatatgctctcttaataaacccatccatattttatgatgaaaatcacaatgttctgtagttttaacatctctt 3396501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 31295669 - 31295619
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  31295669 ccatacatattttatgatgaatcataatgttccgtcgttttaacatatctt 31295619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 34373717 - 34373668
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||||| |||| ||| |||||||||||||||||||||||    
T  34373717 ttatcgaatacgttattaaacccgtgcgaagcacgggtttgtaactagtt 34373668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 34725302 - 34725259
Alignment:
Q  185 gaatatgttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||    
T  34725302 gaatatgttatttaacccgtgcgaagcacgggtttgtaactagt 34725259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 36884823 - 36884780
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||| |||||| |||| |||||||||||||||||||||||||||    
T  36884823 aatacgttattcaacccgtgtgaagcacgggtttgtaactagtt 36884780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 2196022 - 2196068
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaacta 226  Q
    |||||||||| ||||||||||| ||| ||||||||||||| ||||||    
T  2196022 ttatcgaatacgttattgaacccgtgcgaagcacgggtttataacta 2196068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 5620685 - 5620643
Alignment:
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||| ||| |||||||||||||||||||||||    
T  5620685 atatgttattcaacccgtgcgaagcacgggtttgtaactagtt 5620643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 9702709 - 9702751
Alignment:
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||| ||| |||||||||||||||||||||||    
T  9702709 atatgttattcaacccgtgcgaagcacgggtttgtaactagtt 9702751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 20758830 - 20758876
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaacta 226  Q
    |||||||||| ||||||||||| ||| ||||||||||||| ||||||    
T  20758830 ttatcgaatacgttattgaacccgtgcgaagcacgggtttataacta 20758876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 21030993 - 21031039
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaacta 226  Q
    |||||||||| |||||||||||| |||||||||| ||||| ||||||    
T  21030993 ttatcgaatacgttattgaacctatgtgaagcacaggtttataacta 21031039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 31295589 - 31295552
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  31295589 gttattgaacccgtgcgaagcacgggtttgtaactagt 31295552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 34719457 - 34719502
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagttga 231  Q
    |||| |||||| |||| ||| |||||||||||||||||||||||||    
T  34719457 aatacgttattcaacccgtgcgaagcacgggtttgtaactagttga 34719502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 35539258 - 35539209
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||||||||||||||| |||    ||||||||||||||||||||    
T  35539258 ttatcgaatatgttattgaacccgtgcttcgcacgggtttgtaactagtt 35539209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 38935341 - 38935390
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||| ||||| ||||||||||| ||  |||||||||||||||||||||||    
T  38935341 ttatagaatacgttattgaacccgtacgaagcacgggtttgtaactagtt 38935390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 1e-67; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 14078340 - 14078129
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| | |||||||||||||||||||| |||||    
T  14078340 catcattgattcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactggttatatgctctcttaatcagcccata 14078241  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||         ||||||||||||||||| ||||||||||||  | |||||||    
T  14078240 catattttatgatgaatcacaatgttccgtcgttttaacatctcttcttt----caaaaaaaataattatcgaatacgttattgaacctcagcgaagcac 14078145  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  14078144 gggtttgtaactagtt 14078129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 33423769 - 33423624
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  33423769 catcattgattcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagtccata 33423670  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  33423669 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 33423624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 22332214 - 22332069
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| || ||    
T  22332214 catcattggttcctttattggttcaaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccgta 22332115  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  22332114 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 22332069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 19395049 - 19394904
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||| |||| |||||||||||||||||||| | |||||    
T  19395049 catcattggttcctttattggttccaattgttttcatcctaaatattatatcaattcctaatctcataaactgattatatgctctcttaatctgcccata 19394950  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  19394949 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 19394904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 9761745 - 9761890
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  9761745 catcattggttcctttattggttccaattgttttcatcataaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccata 9761844  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||    
T  9761845 catattttatgatgaatcacaatgtttcgtcgttctaacatctctt 9761890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 23522147 - 23522002
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||  ||||    
T  23522147 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgctctcttaatcagcacata 23522048  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  23522047 catattttatgatgaatcacaatgttccgtcattttaacatctctt 23522002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 27273709 - 27273927
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||| ||||||||||| |||||||| |||| |||||||||||||||||||||| |||||    
T  27273709 catcattggttcatttattggttccaattgttttcatcataaatattatgtcaattcataatctcataaactgattatatgctctcttaatcagcccata 27273808  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
     ||||||| |||||||||||||||||| |||||||||||||||||| |||         ||  |  |||||||||| ||||||||||| ||| |||||||    
T  27273809 tatattttttgatgaatcacaatgttccgtcgttttaacatctcttcttt----caaagaatttttttatcgaatacgttattgaacccgtgcgaagcac 27273904  T
Q  214 gggtttgtaactagttgatagaa 236  Q
    |||||||||||||||| ||||||    
T  27273905 gggtttgtaactagtttatagaa 27273927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 36597522 - 36597377
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||||||||||| |||| ||||||||||||| |||||| |||||||||||||||||||| |||| |||||||||||||||||||||  |||||    
T  36597522 catcattggttcctttattagttccaattgttttcatcttaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcaacccata 36597423  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||    
T  36597422 catattttatgatgcatcacaatgttccgtcgttttaacatctctt 36597377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 228
Target Start/End: Original strand, 42785646 - 42785856
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| |||| ||| |||| |||||||||||||||||||||| |||||    
T  42785646 catcattggttcctttattggtttcaattgttttcatcctaaatattatgtcaattcttaatttcataaactgattatatgctctcttaatcagcccata 42785745  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||| |||        |||  |  ||||||||||  |||||||||| ||| ||| |||    
T  42785746 catattttatgatgaatcacaatgttccgtcgttttaacatatcttcttt----caaataatttttttatcgaatacattattgaacccgtgcgaaacac 42785841  T
Q  214 gggtttgtaactagt 228  Q
    |||||||||||||||    
T  42785842 gggtttgtaactagt 42785856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 19248629 - 19248773
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||| |||||  | ||    
T  19248629 catcattggttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttcatcagctcgta 19248727  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  19248728 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 19248773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 19321813 - 19321957
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||| |||||  | ||    
T  19321813 catcattggttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttcatcagctcgta 19321911  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  19321912 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 19321957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 44382282 - 44382141
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| |||||| |||||    
T  44382282 catcattggttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagcccata 44382184  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| |||||||||| ||||    
T  44382183 catattttatgatgaatcacaatgttccgtcgttttaatatct 44382141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 7015652 - 7015795
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||  | | || |||||||||||| |||||||||  ||||    
T  7015652 catcattggttcctttattggttccaattgttttcatcttaaatattatgtcaattcctaatc--atagactgattatatgctcacttaatcagctcata 7015749  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  7015750 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 7015795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 41629393 - 41629519
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaa 129  Q
    |||||||| |||||||||||||||||||| | |||||||||||| ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||    
T  41629393 attggttccaattgttttcatcctaaatattttgtcaattcctagtctcataaactgattatatgctctcttaatcagcccatacatattttatgatgaa 41629492  T
Q  130 tcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||| |||||||||||||||    
T  41629493 tcacaatgttccgtcgttttaacatct 41629519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 45291972 - 45291835
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| |||||  ||||||||||||||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||||| || ||    
T  45291972 catcattggttccttt-ttggtgataattgttttcatcctaaatattatgtcaattcctaatctcataaacttattatatgctctcttaatcagcccgta 45291874  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaac 152  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  45291873 catattttatgatgaatcacaatgttccgtcgttttaac 45291835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 30826868 - 30827013
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||  | |||  |||||||||||||||||||||| |||||    
T  30826868 catcattgattcctttgttggttccaatagttttcatcctaaatattatgtcaattcctaatcgtataaattgattatatgctctcttaatcagcccata 30826967  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||    
T  30826968 catattttatgatgaatcacaatgtttcgtcgttttaacatctctt 30827013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 38962685 - 38962822
Alignment:
Q  18 attggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacata 117  Q
    |||||||| ||||||||||| |||||||||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||||| ||||  |||    
T  38962685 attggttcatttattggttccaattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccatgtata 38962784  T
Q  118 ttttatgatgaatcacaatgttctgtcgttttaacatc 155  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  38962785 ttttatgatgaatcacaatattccgtcgttttaacatc 38962822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 38994185 - 38994330
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||| ||||||||||  || ||||| |||| |||||||||||||||||||||   ||||    
T  38994185 catcattggtttctttattggttccaattgttttcatcctacatattatgtcaatttgtattctcataaactgattatatgctctcttaatcaactcata 38994284  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||    
T  38994285 catattttatgatgaatcacaatgttccgtcgttttaatatctctt 38994330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 44600201 - 44600346
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||| ||||||||||  || ||||| |||| |||||||||||||||||||||   ||||    
T  44600201 catcattggtttctttattggttccaattgttttcatcctacatattatgtcaatttgtattctcataaactgattatatgctctcttaatcaactcata 44600300  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||    
T  44600301 catattttatgatgaatcacaatgttccgtcgttttaatatctctt 44600346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 41978006 - 41978147
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||| |||||| ||||||||| ||| |||| ||||||||| ||||| |||||| |||||    
T  41978006 catcattggtttcttt-ttggttccaattgttttcatcctaaatattatgtccattcctaatttcataaactgattatatgatctctaaatcagcccata 41978104  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  41978105 catattttatgatgaatcacaacgttccgtcgttttaacatct 41978147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 3751609 - 3751749
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||  ||||| |||||| | |||    
T  3751609 catcattggttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatataatctctaaatcagcctata 3751707  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatc 155  Q
    |||||||| |||||||||||||||||| || |||||||||||    
T  3751708 catattttttgatgaatcacaatgttccgttgttttaacatc 3751749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 12760753 - 12760870
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||||||||||| ||||| |||||| | ||||||||||||||||||||||||||||    
T  12760753 aattgttttcatcctatatattatgtcaattcctaatctcataaacagattatatgatctctaaatcagcctatacatattttatgatgaatcacaatgt 12760852  T
Q  139 tctgtcgttttaacatct 156  Q
    || |||||||||||||||    
T  12760853 tccgtcgttttaacatct 12760870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 4465974 - 4465837
Alignment:
Q  18 attggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacata 117  Q
    |||||||||||| ||||||| |||||||||||||||||| | ||||||||||| |||||||| |||  ||||||||| ||||| |||||| |||||||||    
T  4465974 attggttccttt-ttggttccaattgttttcatcctaaacattatgtcaattcataatctcataaattgattatatgatctctaaatcagcccatacata 4465876  T
Q  118 ttttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  4465875 ttttatgatgaatcacaatgttccgttgttttaacatct 4465837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 5836073 - 5836282
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||| |||| ||||||||||| |||||||||  || |||||| ||||||||||||||||||||  ||| |||||||||||||  ||||||| |||||    
T  5836073 catcattagttcttttattggttccaattgtttttttcataaatattatgtcaattcctaatctcattaactgattatatgctct--taatcagcccata 5836170  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||        |    |  |||||||||| ||||||||||| ||| |||||||    
T  5836171 catattttatgatgaatcacaatgttccatcgttttaacatctcttctttcaaagattt----tttttatcgaatacgttattgaacccgtgcgaagcac 5836266  T
Q  214 gggtttgtaactagtt 229  Q
     |||||||||||||||    
T  5836267 aggtttgtaactagtt 5836282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 25345044 - 25345185
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||||||| | ||||| |||||||||||||| |||||||||||||| ||| | |||||| |||||    
T  25345044 catcattggttccttt-ttggttccaattgttttcatcctaaacattatgttaattcctaatctcataaacagattatatgatctttcaatcagcccata 25345142  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||||||||||||||| |||||||||| ||  |||||||||||    
T  25345143 catattttatgatgaaccacaatgttccgtttttttaacatct 25345185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 41533337 - 41533200
Alignment:
Q  18 attggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacata 117  Q
    |||||||||||| || |||| ||||| |||| ||||||||| |||||||||||||||||||| |||  ||||||||| ||||| |||||| |||||||||    
T  41533337 attggttccttt-ttcgttccaattgctttcttcctaaatattatgtcaattcctaatctcataaattgattatatgatctctaaatcagcccatacata 41533239  T
Q  118 ttttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  41533238 ttttatgatgaatcacaatgtcctgtcgttttaacatct 41533200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 7389748 - 7389873
Alignment:
Q  31 ttggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaat 130  Q
    ||||||| |||||||||| ||||||| | |||||||||||||||||||| |||| ||||| ||| ||||| |||||| ||||||||||||||||||||||    
T  7389748 ttggttccaattgttttcctcctaaacattatgtcaattcctaatctcataaactgattaaatgatctctaaatcagcccatacatattttatgatgaat 7389847  T
Q  131 cacaatgttctgtcgttttaacatct 156  Q
    |||||||||| || ||||||||||||    
T  7389848 cacaatgttccgttgttttaacatct 7389873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 25616010 - 25615873
Alignment:
Q  18 attggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacata 117  Q
    |||| ||||||| ||||||| ||||||| |||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  ||||||||    
T  25616010 attgattccttt-ttggttccaattgttatcatcctaaacattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacata 25615912  T
Q  118 ttttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||   | ||||||||||||    
T  25615911 ttttatgatgaatcacaatgtttcattgttttaacatct 25615873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 6476976 - 6476874
Alignment:
Q  18 attggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacata 117  Q
    |||||||||||||||||||| ||||||||| |||||| ||| |||||||||||||||||||| |||| ||||||||||||| |||||||  |||||||||    
T  6476976 attggttcctttattggttccaattgtttttatcctatatattatgtcaattcctaatctcataaactgattatatgctctattaatcatcccatacata 6476877  T
Q  118 ttt 120  Q
    |||    
T  6476876 ttt 6476874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 22946282 - 22946145
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||| |||||||| | ||||||||| ||||  |       |||||||||||||  ||||    
T  22946282 catcattgtttcctttattggttccaattgttttcatcataaatattatgtcaaattctaatctcataaactaa-------ctctcttaatcagctcata 22946190  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctct 158  Q
     |||||||||||||||||||||||||| |||||||||||||||||    
T  22946189 tatattttatgatgaatcacaatgttccgtcgttttaacatctct 22946145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 25620288 - 25620147
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||  ||| |||||||||||||||||| | |||  ||||||| ||||||| |||| ||||||||| ||||| ||||||  ||||    
T  25620288 catcattggttcctttttta-ttccaattgttttcatcctaaacattattccaattcccaatctcataaactgattatatgatctctaaatcagctcata 25620190  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||| ||||||||||||||||| || ||||||||||||    
T  25620189 catattttaagatgaatcacaatgttccgttgttttaacatct 25620147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 41157103 - 41157183
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatg 94  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||    
T  41157103 catcattggttccttttttggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatg 41157183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 42810427 - 42810362
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctca 79  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||    
T  42810427 catcattgattcctttattggttccaattgttttcatcataaatattatgtcaattcctaatctca 42810362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 6300606 - 6300552
Alignment:
Q  105 cagtccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  6300606 cagtccatacatattttatgatgaatcataatgttccgtcgttttaacatatctt 6300552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 42060785 - 42060730
Alignment:
Q  104 tcagtccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  42060785 tcagcccatacatattttatgatgaatcataatgttccgtcgttttaacatatctt 42060730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 44940444 - 44940494
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  44940444 ccatacatattttatgatgaatcataatgttccgtcgttttaacatatctt 44940494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 37029840 - 37029890
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||| ||||    
T  37029840 ccatatatattttatgatgaatcataatgttccgtcgttttaacatatctt 37029890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 19394887 - 19394838
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||||||||||  || |||||||||||||||||||||||    
T  19394887 ttatcgaatacgttattgaacccctgcgaagcacgggtttgtaactagtt 19394838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 30827029 - 30827078
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| ||||||||||| ||  |||||||||||||||||||||||    
T  30827029 ttatcgaatacgttattgaacccgtacgaagcacgggtttgtaactagtt 30827078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 36597360 - 36597311
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||| ||||||| |||||||| ||| |||||||||||||||||||||||    
T  36597360 ttatcaaatatgtcattgaacccgtgcgaagcacgggtttgtaactagtt 36597311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 24055840 - 24055883
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||| |||||| |||||||| |||||||||||||||||||||||    
T  24055840 aatacgttattcaacctgtgcgaagcacgggtttgtaactagtt 24055883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 25361514 - 25361557
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||| | || |||||||||||||||||||||||||||    
T  25361514 aatatgttattcatcccgtgtgaagcacgggtttgtaactagtt 25361557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 41157180 - 41157215
Alignment:
Q  121 tatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||||||||||||||||||| |||||||||||||||    
T  41157180 tatgatgaatcacaatgttccgtcgttttaacatct 41157215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 229
Target Start/End: Complemental strand, 6300526 - 6300488
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  6300526 gttattgaacccgtgcgaagcacgggtttgtaactagtt 6300488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 12249953 - 12249911
Alignment:
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||| ||| |||||||||||||||||||||||    
T  12249953 atatgttattcaacccgtgcgaagcacgggtttgtaactagtt 12249911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 23626097 - 23626055
Alignment:
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||| ||| |||||||||||||||||||||||    
T  23626097 atatgttattcaacccgtgcgaagcacgggtttgtaactagtt 23626055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 23966505 - 23966455
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||| |||| | ||||||| ||||||||||||| ||||    
T  23966505 ccatacatattttatgaagaattataatgttccgtcgttttaacatatctt 23966455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 229
Target Start/End: Original strand, 37029919 - 37029957
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  37029919 gttattgaacccgtgcgaagcacgggtttgtaactagtt 37029957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 39445254 - 39445296
Alignment:
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||| ||| |||||||||||||||||||||||    
T  39445254 atatgttattcaacccgtgcgaagcacgggtttgtaactagtt 39445296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 229
Target Start/End: Complemental strand, 42060699 - 42060661
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  42060699 gttattgaacccgtgcgaagcacgggtttgtaactagtt 42060661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 22332053 - 22332004
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||| ||||| ||||||||||| ||| ||||||||||| |||||||||||    
T  22332053 ttattgaatacgttattgaacccgtgcgaagcacgggtctgtaactagtt 22332004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 23966420 - 23966383
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  23966420 gttattgaacccgtgcgaagcacgggtttgtaactagt 23966383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 27272690 - 27272731
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagttgat 232  Q
    |||||| |||| ||| ||||||||||||||||||||||||||    
T  27272690 gttattcaacccgtgcgaagcacgggtttgtaactagttgat 27272731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 44940522 - 44940559
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  44940522 gttattgaacccgtgcgaagcacgggtttgtaactagt 44940559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 2961046 - 2961006
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagttga 231  Q
    |||||| |||| ||| |||||||||||||||||||||||||    
T  2961046 gttattcaacccgtgcgaagcacgggtttgtaactagttga 2961006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 29434278 - 29434314
Alignment:
Q  192 ttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  29434278 ttattcaacccgtgtgaagcacgggtttgtaactagt 29434314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 6e-60; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 22115565 - 22115420
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||  ||||    
T  22115565 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgctctcttaatcagcacata 22115466  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22115465 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 22115420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 53343185 - 53343330
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||||||||| |||||    
T  53343185 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgctctcttaatcagcccata 53343284  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  53343285 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 53343330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 38009039 - 38009250
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| |||  |||||||||||| ||||||||| |||||    
T  38009039 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatatcataaattgattatatgctcccttaatcagcccata 38009138  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||        |    |  |||||||||| ||||||||||| |||||||||||    
T  38009139 catattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcgaagattt----tttttatcgaatacgttattgaacccgtgtgaagcac 38009234  T
Q  214 gggtttgtaactagtt 229  Q
    | ||||||||||||||    
T  38009235 gtgtttgtaactagtt 38009250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 5271812 - 5271601
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||| ||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  5271812 catcattgattcatttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagtccata 5271713  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    |||||||||||||||||  |||||||| |||||||||||||||||| |||         ||  |  |||||||||| ||||||||||| ||| |||||||    
T  5271712 catattttatgatgaatttcaatgttccgtcgttttaacatctcttcttt----caaagaatttttttatcgaatacgttattgaacccgtgcgaagcac 5271617  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  5271616 gggtttgtaactagtt 5271601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 14 - 230
Target Start/End: Original strand, 21353795 - 21354007
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||  ||||    
T  21353795 catcattggttcttttattggttccaattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgctctcttaatcagcacata 21353894  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||        |    |  |||||||||| ||||||||||| ||| |||||||    
T  21353895 catattttatgatgaatcacaatgtttcgtcgttttaacatctcttctttcaatttttt----tttttatcgaatacgttattgaacccgtgcgaagcac 21353990  T
Q  214 gggtttgtaactagttg 230  Q
    |||||||||||||||||    
T  21353991 gggtttgtaactagttg 21354007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 39742509 - 39742367
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||| ||||||| ||| ||||||||||||| |||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  39742509 catcattggttcatttattgattccaattgttttcatcataaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccata 39742410  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  39742409 catattttatgatgaatcacaatgttctgtcgttttaacatct 39742367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 229
Target Start/End: Original strand, 2777054 - 2777264
Alignment:
Q  15 atcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatac 114  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||||||| ||||  |||||||||||||||||||||  |||||    
T  2777054 atcattggttcctttattggttccaattgttttcatcctaaatattatgttaatttctaatctcataaactaattatatgctctcttaatcagcacatac 2777153  T
Q  115 atattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcacg 214  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||         ||  |  |||||||||| ||||||||||| ||| ||||||||    
T  2777154 atattttatgatgaatcacaatgttccgtcgttttaacatctcttcttt----caaagaatttttttatcgaatacgttattgaacccgtgcgaagcacg 2777249  T
Q  215 ggtttgtaactagtt 229  Q
    |||||||||||||||    
T  2777250 ggtttgtaactagtt 2777264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 14 - 224
Target Start/End: Complemental strand, 33502515 - 33502309
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||  ||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||| || |||||    
T  33502515 catcattggtttttttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaattagcccata 33502416  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| |||        |    |  |||||||||||||||||||||| ||| |||||||    
T  33502415 catattttatgatgaatcacaatgttccgtcattttaacatctcttctttcgatttttt----tttttatcgaatatgttattgaacccgtgcgaagcac 33502320  T
Q  214 gggtttgtaac 224  Q
    |||||||||||    
T  33502319 gggtttgtaac 33502309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 54331270 - 54331069
Alignment:
Q  24 tcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttat 123  Q
    ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||    
T  54331270 tccttcattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccatacatattttat 54331171  T
Q  124 gatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcacgggtttgtaa 223  Q
    ||||||||||||||||| |||||||||||||||||| |||         ||  |  |||||||||| ||||||||||| ||| ||||||||||||| |||    
T  54331170 gatgaatcacaatgttccgtcgttttaacatctcttcttt----caaagaatttttttatcgaatacgttattgaacccgtgcgaagcacgggtttttaa 54331075  T
Q  224 ctagtt 229  Q
    ||||||    
T  54331074 ctagtt 54331069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 41983742 - 41983531
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||| ||||||| |||||||| |||| |||||||| ||||||||||||| |||||    
T  41983742 catcattggttcctttattggttccaattgtttccatcctaaatattatttcaattcataatctcataaactgattatattctctcttaatcagcccata 41983643  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    |||||||||||||||| |||||||||  |||||||||||||||||| |||         ||| |  |||||||||| ||||||||||| ||| |||||||    
T  41983642 catattttatgatgaagcacaatgtttcgtcgttttaacatctcttcttt----caaagaaattttttatcgaatacgttattgaacccgtgcgaagcac 41983547  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  41983546 gggtttgtaactagtt 41983531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 14829048 - 14828903
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||| |||||    
T  14829048 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcataatctcataaactgattatatgctctcttaatcagcccata 14828949  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  14828948 catattttatgatgaatcacaatgttccatcgttttaacatctctt 14828903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 23479654 - 23479799
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| || |||||||||||| ||| |||||||||||||||| |||||||||||||||||| | |||| |||||||||||||||||||||| |||||    
T  23479654 catcattgatttctttattggttccaatagttttcatcctaaatattatgtcaattcctaatcttataaactgattatatgctctcttaatcagcccata 23479753  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  23479754 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 23479799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 36514854 - 36514709
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||| ||||||||||||  ||||    
T  36514854 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgttctcttaatcagcacata 36514755  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  36514754 catattttatgatgaatcacaatattccgtcgttttaacatctctt 36514709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 19109271 - 19109130
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| |||  | |||||||||||||||||||| |||||    
T  19109271 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatttcataaattgtttatatgctctcttaatcagcccata 19109172  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatc 155  Q
    ||||||||||||||||||||||||||| ||||||||| ||||    
T  19109171 catattttatgatgaatcacaatgttccgtcgttttagcatc 19109130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 34056100 - 34055955
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| ||| |||||||||||||||| |||| ||||||||| ||||||||||||  ||||    
T  34056100 catcattgattcctttattggttccaatagttttcatcctaaatattatatcaattcctaatctcataaactgattatatgttctcttaatcagctcata 34056001  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  34056000 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 34055955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 19830911 - 19830768
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||| | | ||||| ||| |||||||||| |||| ||||||||||||| |||||||| |||||    
T  19830911 catcattggttcctttattggttccaattgttttcatcctatacattatgttaatacctaatctcataaactgattatatgctctattaatcagcccata 19830812  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctc 157  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  19830811 catattttatgatgaatcacaatgttccgtcgttttaacatctc 19830768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 55998226 - 55998081
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||||||||| |||  ||||    
T  55998226 catcattggttcctttattggtttcaattgttttcatcctaaatattatgtcaattcctaatatcataaactgattatatgctctcttaaacagctcata 55998127  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||  ||||||||| |||||||    
T  55998126 catattttatgatgaatcacaatgttccttcgttttaatatctctt 55998081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 28973839 - 28974052
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||  || | ||| |||| ||||||||||||||||||||||  ||||    
T  28973839 catcattggtttctttattggttccaattgttttcatcctaaatattatgtcaatttgtattatcataaactgattatatgctctcttaatcagctcata 28973938  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| |||        |    |  ||||| |||||||||||||||| ||| |||||||    
T  28973939 catattttatgatgaatcacaatgttctgtcattttaatatctcttctttcgaagattt--tttttttatcaaatatgttattgaacccgtgcgaagcac 28974036  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  28974037 gggtttgtaactagtt 28974052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 17699956 - 17700094
Alignment:
Q  18 attggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacata 117  Q
    ||||||||||||| |||||| ||||||||||||| |||||| |||||||||||||||||||| ||||  |||||||||||||||||||||  ||||||||    
T  17699956 attggttcctttactggttccaattgttttcatcataaatattatgtcaattcctaatctcataaacttattatatgctctcttaatcagctcatacata 17700055  T
Q  118 ttttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  17700056 ttttatgatgaatcataatgttccgtcgttttaacatct 17700094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 17740822 - 17740963
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||| ||||| |||||  |||||    
T  17740822 catcattggttccttt-ttggttccaattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgatctctaaatcaacccata 17740920  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  17740921 catattttatgatgaatcacaatgttccgtcgttttaacatct 17740963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 47556935 - 47556794
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||| ||| |||||||||||||||| |||| ||||||||| ||||| ||||||| ||||    
T  47556935 catcattggttccttttttg-ttccaattgttttcatcctaaatattatctcaattcctaatctcataaactgattatatgatctctaaatcagttcata 47556837  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  47556836 catattttatgatgaatcacaatgttccgtcgttttaacatct 47556794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 39 - 159
Target Start/End: Complemental strand, 15642548 - 15642428
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  15642548 aattgttttcatcttaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccatacatattttatgatgaatcataatgt 15642449  T
Q  139 tctgtcgttttaacatctctt 159  Q
    || ||||||||||||||||||    
T  15642448 tccgtcgttttaacatctctt 15642428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 35495115 - 35494908
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||||||||||| ||||     
T  35495115 catcattggttcctttattggttccaattgttttcatcctaa-tattatgtcaattcctaatctcataaactaattatatgctctcttaatcagcccat- 35495018  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
     ||||||| |||||||||||||||||| ||||||||||||| | ||| |||       |    |  |||||||||| ||||||||| | |||||||||||    
T  35495017 -atattttctgatgaatcacaatgttccgtcgttttaacatat-ttactttcgaatttt----tttttatcgaatacgttattgaatccgtgtgaagcac 35494924  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  35494923 gggtttgtaactagtt 35494908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 37701111 - 37700967
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||| ||||||||||  |||||||||||||||| ||| ||||||||| |||||| ||| |||| |||||||||||||||||||||| |||||    
T  37701111 catcattggttc-tttattggtttcaattgttttcatcctatatattatgtcaatacctaatttcataaactgattatatgctctcttaatcagcccata 37701013  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||    
T  37701012 catattttatgatgaattacaatgttccatcgttttaacatctctt 37700967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 13628831 - 13628973
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||  ||||||||||| ||||||||||  | ||    
T  13628831 catcattggttcctttattggttctaattgtttt-atcctaaatattatgtcaattcctaatctcataaattgattatatgctatcttaatcag--ccta 13628927  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||| |||||||||||||||||||| || |||||||||||| |||||    
T  13628928 cattttttatgatgaatcacaatgatccgtcgttttaacagctctt 13628973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 2116608 - 2116750
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataat-atgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccat 112  Q
    |||||||||||||||| ||||||| |||||||||||||||||| | | |||||||||| |||||||| |||| ||||||||| ||||| |||||| ||||    
T  2116608 catcattggttccttt-ttggttccaattgttttcatcctaaacatttatgtcaattcataatctcataaactgattatatgatctctaaatcagcccat 2116706  T
Q  113 acatattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||||||||||||||||||||||||||| || ||||||||||||    
T  2116707 acatattttatgatgaatcacaatgttccgttgttttaacatct 2116750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 46104682 - 46104823
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||| ||| |||| ||||||||||||| | |||||||||||||||||||| |||| ||||||||  ||||| |||||| |||||    
T  46104682 catcattggttccttttttgtttc-aattattttcatcctaaacattatgtcaattcctaatctcataaactgattatattatctctaaatcagcccata 46104780  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||||||||| |||||||||||||||| || ||||||||||||    
T  46104781 catattttataatgaatcacaatgttccgttgttttaacatct 46104823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 39715030 - 39714913
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  39715030 aattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcacaatgt 39714931  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  39714930 tccgttgttttaacatct 39714913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 30 - 229
Target Start/End: Original strand, 36857848 - 36858044
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatg-ctctcttaatcagtccatacatattttatgatga 128  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||| |||  ||||||||| ||||||||||||| | |||||||||||||||| |    
T  36857848 attggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaattgattatatggctctcttaatcagcctatacatattttatgataa 36857947  T
Q  129 atcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    |||||||||||| || |||||||| | |||| |||         ||  |  |||||||||| ||||||||||| ||| ||||||||| ||||||||||||    
T  36857948 atcacaatgttccgttgttttaacgtttcttctttcgaag----aatttttttatcgaatacgttattgaacccgtgcgaagcacggatttgtaactagt 36858043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 30 - 159
Target Start/End: Complemental strand, 7643302 - 7643174
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaa 129  Q
    ||||||||  ||||||||||||||||||| |||||||||| ||||||||| |||| |||||||||||||| |||| ||  ||||||||||||||||||||    
T  7643302 attggttccgattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgctctc-taataagctcatacatattttatgatgaa 7643204  T
Q  130 tcacaatgttctgtcgttttaacatctctt 159  Q
    | ||||||||| ||||||||||||| ||||    
T  7643203 ttacaatgttccgtcgttttaacatatctt 7643174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 52800801 - 52800918
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||| ||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  52800801 aattgttttcattctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcacaatgt 52800900  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  52800901 tccgttgttttaacatct 52800918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 40622937 - 40623068
Alignment:
Q  22 gttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatatttt 121  Q
    |||||||| ||||||| |||||||||||||||||||| ||||||||||| |||||||| |||| |||| |||  | |||  || || |||||||||||||    
T  40622937 gttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcttaatctcataaactgattgtat--tatctagattagcccatacatatttt 40623033  T
Q  122 atgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||||||||||||||||||||||||||||||||||    
T  40623034 atgatgaatcacaatgttctgtcgttttaacatct 40623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 12682296 - 12682171
Alignment:
Q  31 ttggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaat 130  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||| |||| ||||| ||| ||||| |||||   |||||||||||||||||||||    
T  12682296 ttggttccaattgttttcatcctaaacattatgtcaattcctaatctcataaactgattaaatgatctctaaatcaactcatacatattttatgatgaat 12682197  T
Q  131 cacaatgttctgtcgttttaacatct 156  Q
    |||||||||| || |||| |||||||    
T  12682196 cacaatgttccgttgtttaaacatct 12682171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 28134830 - 28134771
Alignment:
Q  100 ttaatcagtccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28134830 ttaatcagcccatacatattttatgatgaatcacaatgttccgtcgttttaacatctctt 28134771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 740422 - 740372
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  740422 ccatacatattttatgatgaatcataatgttccgtcgttttaacatatctt 740372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 14828851 - 14828803
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  14828851 ttatcgaatacgttattgaacccgtgcgaagcacgggtttgtaactagt 14828803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 15520993 - 15521043
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||| ||||    
T  15520993 ccatatatattttatgatgaatcataatgttccgtcgttttaacatatctt 15521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 22115402 - 22115353
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| ||||||||| | ||| |||||||||||||||||||||||    
T  22115402 ttatcgaatacgttattgaatccgtgggaagcacgggtttgtaactagtt 22115353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 23479817 - 23479866
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| ||||||||||  ||| |||||||||||||||||||||||    
T  23479817 ttatcgaatacgttattgaactcgtgcgaagcacgggtttgtaactagtt 23479866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 39404634 - 39404591
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||    
T  39404634 aatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 39404591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 229
Target Start/End: Original strand, 15521073 - 15521111
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  15521073 gttattgaacccgtgcgaagcacgggtttgtaactagtt 15521111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 19830748 - 19830699
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||||||||||  || ||||||||||| |||||||||||    
T  19830748 ttatcgaatacgttattgaacccatgcgaagcacgggtatgtaactagtt 19830699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 28134756 - 28134707
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| ||||||||||| ||| |||||||  ||||||||||||||    
T  28134756 ttatcgaatacgttattgaacccgtgcgaagcacaagtttgtaactagtt 28134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 34055938 - 34055890
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| ||||||||||| ||| ||| |||||||||||||||||||    
T  34055938 ttatcgaatacgttattgaacccgtgcgaa-cacgggtttgtaactagtt 34055890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 15650523 - 15650483
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagttga 231  Q
    |||||| |||| ||| |||||||||||||||||||||||||    
T  15650523 gttattcaacccgtgcgaagcacgggtttgtaactagttga 15650483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 6e-60; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 21699086 - 21698941
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  21699086 catcattagttcctttattggttcaaattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgctctcttaatcagtccata 21698987  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  21698986 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 21698941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 50770769 - 50770624
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||||||||||||| |||||    
T  50770769 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatatcataaactgattatatgctctcttaatcagcccata 50770670  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  50770669 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 50770624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 18741727 - 18741582
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| | |||| |||||||||||||||||||||| |||||    
T  18741727 catcattggttcctttattggttccaattgttttcattctaaatattatgtcaattcctaatcttataaactgattatatgctctcttaatcagcccata 18741628  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  18741627 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 18741582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 8243263 - 8243405
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  8243263 catcattgattcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccata 8243362  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  8243363 catattttatgatgaatcacaatgttccgttgttttaacatct 8243405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 19406836 - 19406686
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  19406836 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccata 19406737  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttatttt 164  Q
     |||||||||||||||||||||||||   ||||||||||||||||| ||||    
T  19406736 tatattttatgatgaatcacaatgtttcatcgttttaacatctcttttttt 19406686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 31368538 - 31368393
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||| ||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  31368538 catcattgattcctttattggttccaatagttttcattctaaatattatgtcaattcctaatttcataaactgattatatgctctcttaatcagtccata 31368439  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  31368438 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 31368393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 23194953 - 23195098
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| || ||||||| | || |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  23194953 catcattgatttctttattagctccaattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgctctcttaatcagtccata 23195052  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  23195053 catattttatgatgaatcacaatgttctgtcgttttaaaatctctt 23195098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 30 - 229
Target Start/End: Complemental strand, 35087358 - 35087162
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaa 129  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||| ||||||    
T  35087358 attggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccatacatattttacgatgaa 35087259  T
Q  130 tcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||| |||||||||||||||||| ||||       |    |  |||||||||| ||||||||||| ||| ||||||||||||| |||||||||    
T  35087258 tcacaatgttccgtcgttttaacatctcttcttttaaagaatt---ttttttatcgaatacgttattgaacccgtgcgaagcacgggtttttaactagtt 35087162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 6103643 - 6103501
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||| ||||||||||  ||||    
T  6103643 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctatcttaatcagctcata 6103544  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  6103543 catattttatgatgaatcataatgttctgtcgttttaacatct 6103501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 51249059 - 51249204
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||  |||||| ||||||||||||||| |||||    
T  51249059 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcataatctcataaattgattatgtgctctcttaatcagcccata 51249158  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||  |||||||| ||||||||    
T  51249159 catattttatgatgaatcacaatgttccatcgttttagcatctctt 51249204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 52462425 - 52462212
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||| ||||||| |||||||| |||| |||||||| ||||||||||||| |||||    
T  52462425 catcattggttcctttattggttccaattgtttccatcctaaatattatttcaattcttaatctcataaactgattatattctctcttaatcagcccata 52462326  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||| |||         ||| |  ||||| |||| ||||||||||| ||| |||||||    
T  52462325 catattttatgatgaatcataatgtttcgtcgttttaacatctcttcttt----caaagaaattttttatcaaatacgttattgaacccgtgcgaagcac 52462230  T
Q  214 gggtttgtaactagttga 231  Q
    || |||||||||||||||    
T  52462229 ggatttgtaactagttga 52462212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 54934566 - 54934776
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||| |||||||| ||||  || ||||||| ||||||||||||||||    
T  54934566 catcattgtttcctttattggttccaattattttcatcctaaatattatgtcaattcttaatctcataaactaatgatatgctttcttaatcagtccata 54934665  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| ||||         |  |  ||||||||||  |||||||||| ||| |||||||    
T  54934666 catattttatgatgaatcacaatgttccttcgttttaacatctcttcttttaaag-----atttttttatcgaatacattattgaacccgtgcgaagcac 54934760  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  54934761 gggtttgtaactagtt 54934776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 54648390 - 54648245
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||| ||||||||| |||| ||||| |||||||||||||||  | |||    
T  54648390 catcattggttcctttattggtttcaattgttttcatcctaaatattatgtcaattactaatctcataaactgattacatgctctcttaatcaacctata 54648291  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  54648290 catattttatgatgaatcacaatgttccatcgttttaacatctctt 54648245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 52842345 - 52842484
Alignment:
Q  16 tcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccataca 115  Q
    |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| ||||||  ||||||    
T  52842345 tcattggttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcataca 52842443  T
Q  116 tattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  52842444 tattttatgatgaatcacaatgttccgtcgttttaacatct 52842484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 54513545 - 54513691
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatg--ctctcttaatcagtcca 111  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| |||  |||||||||  ||||||||||||| |||    
T  54513545 catcattggttcctttattggttccaattgttttcatcataaatattatgtcaattcctaatctcataaattgattatatgctctctcttaatcagccca 54513644  T
Q  112 tacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||    
T  54513645 ta-atattttatgatgaatcacaatgttccgtcgttttaacatctctt 54513691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 50742128 - 50742338
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||| |||| | ||||||||||||||||| |  |||||    
T  50742128 catcattggttcctttatttgttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgtttatatgctctcttaattatcccata 50742227  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| ||| ||||| |||| ||| ||||         || |  || || |||| ||||||||||| ||| |||||||    
T  50742228 catattttatgatgaatcacaatgttccgtcattttagcatcacttcttttaaag-----aattttttttcaaatacgttattgaacccgtgcgaagcac 50742322  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  50742323 gggtttgtaactagtt 50742338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 48520534 - 48520393
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||| ||||||| |||||||||||| ||||||| |||||||||||||||||||| |||| ||||||||| ||||| |||||| |||||    
T  48520534 catcattggttacttt-ttggttccaattgttttcattctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagcccata 48520436  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  48520435 catattttatgatcaatcacaatgttctgtcgttttaacatct 48520393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 30 - 229
Target Start/End: Original strand, 49113824 - 49114019
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaa 129  Q
    |||| ||| ||||||||| |||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||||||||||    
T  49113824 attgattccaattgtttttatcctaaatattatgtcaattcctaatctcataaattgattatatgctctcttaatcagcccatacatattttatgatgaa 49113923  T
Q  130 tcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||  |||||||||||||||||| |||        |    |  |||||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  49113924 tcacaatgtttcgtcgttttaacatctcttctttcgatttttt----tttttatcgaatacgttattgaacctgtgcgaagcacgagtttgtaactagtt 49114019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 228
Target Start/End: Original strand, 32756274 - 32756477
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||  |       ||||||||||||| |||||    
T  32756274 catcattgtttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactaa-------ctctcttaatcagcccata 32756366  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||| ||||        ||  |  ||||||||||| ||||||||||  ||||||||||    
T  32756367 catattttatgatgaatcacaatgttccgtcgttttaccatctcttcttttgaag----aatttttttatcgaatatattattgaacccatgtgaagcac 32756462  T
Q  214 gggtttgtaactagt 228  Q
    |||||||||||||||    
T  32756463 gggtttgtaactagt 32756477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 39093086 - 39093227
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||| ||| |||||||| ||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| ||||||  ||||    
T  39093086 catcattggttccttttttg-ttccaattgtttgcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcata 39093184  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  39093185 catattttatgatgaatcacaatgttccgtcgttttaacatct 39093227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 40824163 - 40824023
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||| |||| | ||||||  |||||||||||| |||||    
T  40824163 catcattggttccttt-ttggttcaaattgttttcatcc-aaatattatgtcaattcctaatctcataaactgtttatattttctcttaatcagcccata 40824066  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  40824065 catattttatgatgaatcacaatgttccgtcgttttaacatct 40824023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 52852954 - 52852743
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||||  ||||    
T  52852954 catcattggttcctttattggttctaattgttttcatcctaaatattatgttaattcctaatttcataaactgattatatgctctcttaatcagctcata 52852855  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    |||||||||| |||||||| ||| |||  | |||||||||| |||| |||         ||  |  |||||||||| ||||||||||| ||| |||||||    
T  52852854 catattttataatgaatcataatattccattgttttaacatatcttcttt----cgaagaatttttttatcgaatacgttattgaacccgtgcgaagcac 52852759  T
Q  214 gggtttgtaactagtt 229  Q
    | ||||||||||||||    
T  52852758 gagtttgtaactagtt 52852743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 55294275 - 55294134
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| |||||| ||||     
T  55294275 catcattggttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagcccatg 55294177  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||    
T  55294176 catattttatgatgaatcacaatattccgtcgttttaaaatct 55294134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 4138281 - 4138140
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||| ||||||| |||||||||||||||||| | |||||||||| ||||||||| |||| ||||||||| ||||| |||||| |||||    
T  4138281 catcattggtttcttt-ttggttccaattgttttcatcctaaacattatgtcaatttctaatctcataaactgattatatgatctctaaatcagcccata 4138183  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  4138182 catattttatgatgaatcacaatgttccgttgttttaacatct 4138140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 2839725 - 2839580
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||  |||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||| |||||||||||   ||||    
T  2839725 catcattgattcctttattggtttcaattgttttcatcctaaatattatgtcaattcttaatctcataaactgattatatgttctcttaatcaactcata 2839626  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
     ||||||||| |||||| ||||||||| ||||||||||||||||||    
T  2839625 tatattttataatgaattacaatgttccgtcgttttaacatctctt 2839580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 26777427 - 26777286
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||| |||||||| ||||||| |||||||||||||||||| | |||| ||||||||||||||| |||| ||||||||| ||||  ||||||  ||||    
T  26777427 catcattagttccttt-ttggttccaattgttttcatcctaaacattatgccaattcctaatctcataaactgattatatgatctcgaaatcagctcata 26777329  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  26777328 catattttatgatgaatcacaatgttccgttgttttaacatct 26777286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 16342411 - 16342545
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||||||||||||   ||||||||||||||||| ||||||||||  || ||||| |||| ||||||||| ||||||||||||  ||||    
T  16342411 catcattggtttctttattggttct---tgttttcatcctaaatattatgtcaatttttattctcataaactgattatatgatctcttaatcagctcata 16342507  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaa 151  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  16342508 catattttatgatgaatcataatgttccgtcgttttaa 16342545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 19353698 - 19353771
Alignment:
Q  86 gattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  19353698 gattatatgctctcttaatcaatccatacatattttatgatgaatcacaatgtttcatcgttttaacatctctt 19353771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 11597451 - 11597376
Alignment:
Q  81 aaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||| ||||||||| ||||| |||||| | |||||||||||||||||||||||||||||  |||||||||| ||||    
T  11597451 aaactgattatatgatctctaaatcagcctatacatattttatgatgaatcacaatgtttcgtcgttttaatatct 11597376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 48988911 - 48988955
Alignment:
Q  111 atacatattttatgatgaatcacaatgttctgtcgttttaacatc 155  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  48988911 atacatattttatgatgaatcacaatgttccgtcgttttaacatc 48988955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 5252371 - 5252321
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  5252371 ccatacatattttatgatgaatcataatgttccgtcgttttaacatatctt 5252321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 39796470 - 39796425
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacat 154  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  39796470 ccatacatattttatgatgaatcataatgttccgtcgttttaacat 39796425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 16342571 - 16342622
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagttga 231  Q
    |||||||||| ||||||||||| ||| ||| |||||||||||||||||||||    
T  16342571 ttatcgaatacgttattgaacccgtgcgaaacacgggtttgtaactagttga 16342622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 48977676 - 48977754
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctc--acaaacagattatatgctctcttaatca 106  Q
    |||||||| |||||||||||||||||| | |||||||||||  ||||||  | |||| |||||||||||||||| ||||    
T  48977676 attggttccaattgttttcatcctaaaaattatgtcaattcaaaatctcataaaaactgattatatgctctcttgatca 48977754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 6103481 - 6103432
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| ||||||||||| ||| ||||||| |||||||||||||||    
T  6103481 ttatcgaatacgttattgaacccgtgcgaagcacaggtttgtaactagtt 6103432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 50770607 - 50770559
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    |||||||||| ||||||||||| ||| ||||||||||||| ||||||||    
T  50770607 ttatcgaatacgttattgaacccgtgcgaagcacgggtttttaactagt 50770559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 26776476 - 26776433
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||    
T  26776476 aatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 26776433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 21165972 - 21165930
Alignment:
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||| ||| |||||||||||||||||||||||    
T  21165972 atatgttattcaacccgtgcgaagcacgggtttgtaactagtt 21165930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 31368376 - 31368326
Alignment:
Q  180 ttatcgaatatgttattgaacct-gtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||||||||||  ||| |||||||||||||||||||||||    
T  31368376 ttatcgaatacgttattgaaccccgtgcgaagcacgggtttgtaactagtt 31368326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 53801027 - 53801068
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaa 56  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  53801027 catcattggttccttt-ttggttccaattgttttcatcctaaa 53801068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 54513708 - 54513758
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagttg 230  Q
    |||||||||| |||||||||   ||||||||||||| ||||||||||||||    
T  54513708 ttatcgaatacgttattgaaatcgtgtgaagcacggttttgtaactagttg 54513758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 5252291 - 5252254
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  5252291 gttattgaacccgtgcgaagcacgggtttgtaactagt 5252254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 19353788 - 19353837
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| ||||||||||| ||| ||||||| | |||||||||||||    
T  19353788 ttatcgaatacgttattgaacccgtgcgaagcacagatttgtaactagtt 19353837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 22522271 - 22522312
Alignment:
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    |||||||||| |||| ||| ||||||||||||||||||||||    
T  22522271 atatgttattcaacccgtgcgaagcacgggtttgtaactagt 22522312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 6e-60; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 14 - 228
Target Start/End: Original strand, 26822388 - 26822598
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||||||||||||| |||||    
T  26822388 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatatcataaactgattatatgctctcttaatcagcccata 26822487  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||         ||  |  |||||||||| ||||||||||| ||| |||||||    
T  26822488 catattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcaaag----aatttttttatcgaatacgttattgaacccgtgcgaagcac 26822583  T
Q  214 gggtttgtaactagt 228  Q
    |||||| ||||||||    
T  26822584 gggtttttaactagt 26822598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 5253125 - 5253337
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||  ||||    
T  5253125 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgctctcttaatcagcacata 5253224  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||        |    |  |||||||||| ||||||||||| ||| |||||||    
T  5253225 catattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcaaagagtt---ttttttatcgaatacgttattgaacccgtgcgaagcac 5253321  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  5253322 gggtttgtaactagtt 5253337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 36632546 - 36632401
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||||||||||    
T  36632546 catcattggttcatttattggttccaattgttttcatcctaaatattatgtcaattcataatctcataaactgattatatgctctcttaatcagtccata 36632447  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
     |||||||||||||||||||||||||| ||||||||||||||||||    
T  36632446 tatattttatgatgaatcacaatgttccgtcgttttaacatctctt 36632401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 14 - 232
Target Start/End: Original strand, 45399583 - 45399797
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||||| |||||    
T  45399583 catcattgtttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactaattatatgctctcttaatcagcccata 45399682  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||         ||  |  |||| |||||| |||||||||| ||| |||||||    
T  45399683 catattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcgaag----aatttttttattgaatatattattgaacccgtgggaagcac 45399778  T
Q  214 gggtttgtaactagttgat 232  Q
    |||||||||| ||||||||    
T  45399779 gggtttgtaattagttgat 45399797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 19167359 - 19167214
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| |||||||||||| |||||    
T  19167359 catcaatggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgttctcttaatcagcccata 19167260  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||    
T  19167259 catattttataatgaatcacaatgttccgtcgttttaacatctctt 19167214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 42886172 - 42886316
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| ||||||||||| |||||    
T  42886172 catcattggt-catttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgcgctcttaatcagcccata 42886270  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  42886271 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 42886316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 15 - 159
Target Start/End: Complemental strand, 19126209 - 19126065
Alignment:
Q  15 atcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatac 114  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||||  |||||    
T  19126209 atcattggttcctttattggttccaattattttcatcctaaatattatgtcaattcctaatatcataaactgattatatgctctcttaatcagctcatac 19126110  T
Q  115 atattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||    
T  19126109 atattttatgatgaatcacaatgttccgtcattttaacatctctt 19126065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 16723873 - 16723659
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||| ||||||||||| ||| |||||||| ||||||| |||||||||||||||||||| |||| ||||||||||||||| |||||| |||||    
T  16723873 catcattgattcttttattggttcaaatagttttcattctaaatattatgtcaattcctaatctcataaactgattatatgctctctaaatcaggccata 16723774  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||        |    |  |||||||||| ||||||||||  ||| |||||||    
T  16723773 catattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcaaagattt---ttttttatcgaatacgttattgaactcgtgcgaagcac 16723677  T
Q  214 gggtttgtaactagttga 231  Q
    ||||||||||||||||||    
T  16723676 gggtttgtaactagttga 16723659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 45204505 - 45204294
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||||||||||| |||| ||||||||||||  |||||| ||||||||||| |||||||| |||| ||||| ||||| |||||||||| |||||    
T  45204505 catcattggttcctttattagttccaattgttttcattttaaatattatgtcaattcgtaatctcagaaactgattagatgctttcttaatcagcccata 45204406  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||         ||  |  ||||| |||||||||||||||| ||| |||||||    
T  45204405 catattttatgatgaatcacaatgttctgtcgttttaacatctcttcttt----caaagaatttttttatcaaatatgttattgaacccgtgcgaagcac 45204310  T
Q  214 gggtttgtaactagtt 229  Q
    | ||||||||||||||    
T  45204309 gagtttgtaactagtt 45204294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 21098457 - 21098602
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| |||  |||||||| |||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  21098457 catcattgattcctttattggttccaataattttcatcataaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccata 21098556  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  21098557 catattttatgatgaatcacaatgttccatcgttttaacatctctt 21098602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 11448526 - 11448671
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||| | |||| |||||| |||| |||||||||  |||||    
T  11448526 catcattggttcctttattggtttcaattgttttcatcttaaatattatgtcaattcctaatcttataaactgattatttgctttcttaatcaacccata 11448625  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  11448626 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 11448671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 33908022 - 33908234
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||  || ||||| |||| |||||||| |||||||||||||  ||||    
T  33908022 catcattggtttctttattggttccaattgttttcatcctaaatattatgtcaatttgtattctcataaactgattatatactctcttaatcagctcata 33908121  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||        |    |  |||||||||| ||||||||||| ||| |||||||    
T  33908122 catattttatgatgaatcacaatgttccgtcgttttaatatctcttctttcgaagaatt---ttttttatcgaatacgttattgaacccgtgcgaagcac 33908218  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  33908219 gggtttgtaactagtt 33908234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 4812319 - 4812467
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||||||||  |||||    
T  4812319 catcattgtttcctttattggttccaattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgctctcttaatcatcccata 4812418  T
Q  114 c---atattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |   |||||||||||||||||||||||||| |||||||||| |||||||    
T  4812419 catgatattttatgatgaatcacaatgttccgtcgttttaatatctctt 4812467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 33663266 - 33663122
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||| ||||||||||  ||||||||||||| |||||| |||||||||| ||||||||| |||| |||||||||||||||||||||| |||||    
T  33663266 catcattggttcatttattggtttcaattgttttcatc-taaatattatgtcaattactaatctcataaactgattatatgctctcttaatcagcccata 33663168  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  33663167 catattttatgatgaatcacaatgttccgtcattttaacatatctt 33663122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 14 - 228
Target Start/End: Original strand, 11707405 - 11707615
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||||||||||  |||||||||||||||||||| |||| |||||  || ||||| |||| ||||||||||||||||||||||  ||||    
T  11707405 catcattggtttctttattggtttcaattgttttcatcctaaatattatgccaatttgtattctcataaactgattatatgctctcttaatcagctcata 11707504  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||        |    |  |||||||||| ||||||||||| ||| |||||||    
T  11707505 catattttatgatgaatcacaatgttccgtcgttttaatatctcttctttcgaagattt----tttttatcgaatacgttattgaacccgtgcgaagcac 11707600  T
Q  214 gggtttgtaactagt 228  Q
    |||||||||||||||    
T  11707601 gggtttgtaactagt 11707615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 26828290 - 26828502
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||| ||||||||||  || ||||| ||||  |||||||||||||||||||||  ||||    
T  26828290 catcattagtttctttattggttccaattgttttcatcctaaatattatgtcaatttgtattctcataaactaattatatgctctcttaatcagctcata 26828389  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||        |    |  |||||||||| ||||||||||| ||| |||||||    
T  26828390 catattttatgatgaatcacaatgttccgtcgttttaatatctcttctttcgaagattt---ttttttatcgaatacgttattgaacccgtgcgaagcac 26828486  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  26828487 gggtttgtaactagtt 26828502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 30570049 - 30569901
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | |||| ||||||||||||||||||||||  | ||    
T  30570049 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatcttataaactgattatatgctctcttaatcag--ccta 30569952  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttatttt 164  Q
    ||| |||||||||||||||||||||||  || |||||||| ||||| ||||    
T  30569951 cattttttatgatgaatcacaatgttccttcattttaacagctcttctttt 30569901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 1514481 - 1514340
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||| ||||| |||||  |||||    
T  1514481 catcattggttctttt-ttggttccaattgttttcatcctaaatattatgtcaattcttaatctcataaactgattatatgatctctaaatcaacccata 1514383  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||| ||||||||||||||||||| |||||||||||||||    
T  1514382 catatttcatgatgaatcacaatgttccgtcgttttaacatct 1514340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 10048511 - 10048385
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaa 129  Q
    |||||||| |||| ||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| |||||| |||||||||||||||||||||    
T  10048511 attggttccaattattttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagcccatacatattttatgatgaa 10048412  T
Q  130 tcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||| || ||||||||||||    
T  10048411 tcacaatgttccgttgttttaacatct 10048385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 18092215 - 18092089
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaa 129  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||| ||||| ||| || |||||||||||||||||||||    
T  18092215 attggttccaattgttttcatcctaaatattatgtcaattcctaatttcataaactgattatatgatctctaaattagcccatacatattttatgatgaa 18092116  T
Q  130 tcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||| |||||||||||||||    
T  18092115 tcacaatgttccgtcgttttaacatct 18092089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 9544130 - 9544008
Alignment:
Q  34 gttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcac 133  Q
    |||| |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  ||||||||||||||||||||||||    
T  9544130 gttccaattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcac 9544031  T
Q  134 aatgttctgtcgttttaacatct 156  Q
    ||||||| || ||||||||||||    
T  9544030 aatgttccgttgttttaacatct 9544008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 4291159 - 4291042
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  4291159 aattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcacaatgt 4291060  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  4291059 tccgttgttttaacatct 4291042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 230
Target Start/End: Complemental strand, 35285787 - 35285582
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||| |||||||| | | |||| || ||||  |       |||||||||||||  ||||    
T  35285787 catcattgtttcctttattggttccaattgttttcatcataaatattatgtcaaattccaatcacataaactaa-------ctctcttaatcagctcata 35285695  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||         ||  |  ||||||||||| |||||||||| ||| |||||||    
T  35285694 catattttatgatgaatcacaatgttccgtcgttttaacatctcttcttt----cgaagaatttttttatcgaatatattattgaacccgtgcgaagcac 35285599  T
Q  214 gggtttgtaactagttg 230  Q
    |||||||||||||||||    
T  35285598 gggtttgtaactagttg 35285582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 27364331 - 27364267
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctc 78  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  27364331 catcattgtttcctttattggttccaattgttttcatcctaaatatgatgtcaattcctaatctc 27364267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 159
Target Start/End: Complemental strand, 27364270 - 27364207
Alignment:
Q  96 tctcttaatcagtccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27364270 tctcttaatcatctcatacatattttatgatgaatcacaatgttccgtcgttttaacatctctt 27364207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 110 - 228
Target Start/End: Original strand, 18137828 - 18137942
Alignment:
Q  110 catacatattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaa 209  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||         ||  |  |||||||||| ||||||||||| ||| |||    
T  18137828 catacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcaaag----aatttttttatcgaatacgttattgaacccgtgcgaa 18137923  T
Q  210 gcacgggtttgtaactagt 228  Q
    |||| ||||||||||||||    
T  18137924 gcacaggtttgtaactagt 18137942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 28608446 - 28608503
Alignment:
Q  99 cttaatcagtccatacatattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||| |||| |||||||||||||||||||||||||||||||| || ||||||||||||    
T  28608446 cttagtcagcccatacatattttatgatgaatcacaatgttccgttgttttaacatct 28608503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 6342842 - 6342792
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  6342842 ccatacatattttatgatgaatcataatgttccgtcgttttaacatatctt 6342792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 14323326 - 14323276
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  14323326 ccatacatattttatgatgaatcataatgttccgtcgttttaacatatctt 14323276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 1993067 - 1993017
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||| ||||    
T  1993067 ccatacatattttatgatgaattataatgttccgtcgttttaacatatctt 1993017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 28502444 - 28502494
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||    
T  28502444 ccatacatattttatgatgaatcataatattccgtcgttttaacatatctt 28502494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 9542672 - 9542629
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||    
T  9542672 aatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 9542629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 42782673 - 42782716
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||| |||||| |||| |||||||||||||||||||||||||||    
T  42782673 aatacgttattcaacccgtgtgaagcacgggtttgtaactagtt 42782716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 9916749 - 9916707
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    |||| |||||| |||||||| ||||||||||||||||||||||    
T  9916749 aatacgttattcaacctgtgcgaagcacgggtttgtaactagt 9916707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 1992987 - 1992950
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  1992987 gttattgaacccgtgcgaagcacgggtttgtaactagt 1992950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 19167197 - 19167149
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| ||||||||||| ||| || ||||||||||||||||||||    
T  19167197 ttatcgaatacgttattgaacccgtgcga-gcacgggtttgtaactagtt 19167149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 4289070 - 4289026
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagttg 230  Q
    |||| |||||| |||| ||| ||||||||||||||||||||||||    
T  4289070 aatacgttattcaacccgtgcgaagcacgggtttgtaactagttg 4289026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 15 - 230
Target Start/End: Complemental strand, 14828 - 14617
Alignment:
Q  15 atcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatac 114  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||  |||||    
T  14828 atcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagctcatac 14729  T
Q  115 atattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcacg 214  Q
    ||||||||||||||||||||||||||  || |||||||||||||| ||||        ||  |  |||||||||| ||||||||||| ||  ||||||||    
T  14728 atattttatgatgaatcacaatgttccatcattttaacatctcttcttttaaag----aatttttttatcgaatacgttattgaacccgtacgaagcacg 14633  T
Q  215 ggtttgtaactagttg 230  Q
    ||||||||||||||||    
T  14632 ggtttgtaactagttg 14617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 3e-58; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 18598515 - 18598304
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||| |||||    
T  18598515 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaagcagcccata 18598416  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||        |||  |  |||||||||| ||||||||||| ||| |||||||    
T  18598415 catattttatgatgaatcacaatgttccgtcgttttaacatctcttcttt----caaataatttttttatcgaatacgttattgaacccgtgcgaagcac 18598320  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||| ||||||||    
T  18598319 gggtttggaactagtt 18598304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 18312530 - 18312675
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||||||||| |||||    
T  18312530 catcattggttcctttattggttccaattattttcatcctaaatattatgtcaatttctaatctcataaactgattatatgctctcttaatcagcccata 18312629  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  18312630 catattttatgatgaatcacaatgttctgtcgtttcaacatctctt 18312675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 33320955 - 33320814
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| |||||| |||||    
T  33320955 catcattggttccttt-ttggttctaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagcccata 33320857  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33320856 catattttatgatgaatcacaatgttctgtcgttttaacatct 33320814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 34856669 - 34856814
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  34856669 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagtccata 34856768  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||| ||||||| || |||||||||||||||    
T  34856769 catattttatgatgaatcataatgttccgtagttttaacatctctt 34856814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 1072793 - 1072648
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  1072793 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccata 1072694  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||  |||||||| ||||||||||||||||||    
T  1072693 catattttatgatgaatttcaatgttccgtcgttttaacatctctt 1072648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 14887468 - 14887323
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||  ||| |||||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||| | |||    
T  14887468 catcattgattcctttattggtttcaatagttttcatcctaaatattatgtcaattcttaatctcataaactgattatatgctctcttaatcagcctata 14887369  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14887368 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 14887323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 33814708 - 33814853
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||  |||||    
T  33814708 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaattgattatatgctctcttaatcatcccata 33814807  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||||    
T  33814808 catattttatgatgaatcacaatgtttcgtcgttttatcatctctt 33814853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 17940260 - 17940405
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| |||||||||||  |||||    
T  17940260 catcattggtttctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgttctcttaatcaacccata 17940359  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||  |||||||| ||||||||    
T  17940360 catattttatgatgaatcacaatgttccatcgttttagcatctctt 17940405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 35041828 - 35041972
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||  ||||    
T  35041828 catcattggttcctttattggttccaattgttt-catcctaaatattatgtcaatttctaatctcataaactgattatatgctctcttaatcagcacata 35041926  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  35041927 catattttatgatgaatcacaatcttccgtcgttttaacatctctt 35041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 35158715 - 35158854
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| ||||||||||||    
T  35158715 catcattggttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagtccata 35158813  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacat 154  Q
    || |||||||||||||||||||||||| |||||||||||||    
T  35158814 cagattttatgatgaatcacaatgttccgtcgttttaacat 35158854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 11933012 - 11932874
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||  |||| |||||||| |||||||||||||  ||||    
T  11933012 catcattggttcctttattggtttcaattgttttcatcctaaatattatgtcaattcctaatctcttaaactgattatatactctcttaatcaggtcata 11932913  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaac 152  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  11932912 catattttatgatgaatcacaatgttccgtcgttttaac 11932874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 21800258 - 21800403
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| || |||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||  ||||    
T  21800258 catcattgatttctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcaggtcata 21800357  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||| |||||||||||| |||||||| |||||||||    
T  21800358 catattttatgatgcatcacaatgttccgtcgtttttacatctctt 21800403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 22373350 - 22373205
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||| |||| |||||| |||||||||||||||  ||||    
T  22373350 catcattggttcctttattgggtctaattgttttcatcttaaatattatgtcaattcctaatctcataaactgattatgtgctctcttaatcagctcata 22373251  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||| ||| || |||||||||| ||||    
T  22373250 catattttatgatgaatcacaatattccgtagttttaacatatctt 22373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 14832228 - 14832369
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||| |||||||| ||||||||||| |||| ||||||||| ||||| |||||| |||||    
T  14832228 catcattggttcgttt-ttggttccaattgttttcatcctaaatattatgtcaactcctaatctcataaactgattatatgatctctaaatcagcccata 14832326  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
     |||||||||||||||||||||||||| |||||||||||||||    
T  14832327 tatattttatgatgaatcacaatgttccgtcgttttaacatct 14832369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 15276376 - 15276521
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||| ||||| |||||| ||||||| |||| ||||||||| ||||||||||||  ||||    
T  15276376 catcattggttcctttattggttccaattgtttttatcataaatattatgttaattcccaatctcataaactgattatatgatctcttaatcagctcata 15276475  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  15276476 catattttatgatgaatcacaatattccgtcattttaacatctctt 15276521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 4108470 - 4108611
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||| ||||| |||||| |||||    
T  4108470 catcattggttccttt-ttggttcctattgttttcatcctaaatattatgtcaattcttaatctcataaactgattatatgatctctaaatcagcccata 4108568  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||||||||| |||||||||||||||| || ||||||||||||    
T  4108569 catattttataatgaatcacaatgttccgttgttttaacatct 4108611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 4425226 - 4425362
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||         | |||||||||||||||||||||  |||||    
T  4425226 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaa---------ctgattatatgctctcttaatcaacccata 4425316  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  4425317 catattttatgatgaatcataatgttccgtcgttttaacatctctt 4425362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 25540684 - 25540825
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||| ||| |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| |||||| |||||    
T  25540684 catcattggttccttttttg-ttccaattgttttcatcctaaacattatgtcaattcctaatctcataaactgattatatgatctctaaatcaggccata 25540782  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||| ||| || ||||||||||| ||||    
T  25540783 catattttatgatgaatcataattttttgtcgttttaatatct 25540825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 30 - 159
Target Start/End: Original strand, 34321844 - 34321973
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaa 129  Q
    |||||||| |||||||||||||||||||| |||| ||||| ||||||||| |||| |||||||||||||||||||| | || ||||||||| ||||||||    
T  34321844 attggttccaattgttttcatcctaaatattatgccaatttctaatctcataaactgattatatgctctcttaatctgcccgtacatatttcatgatgaa 34321943  T
Q  130 tcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||| || |||||||||||||||    
T  34321944 tcacaatgttccgttgttttaacatctctt 34321973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 1220294 - 1220411
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  1220294 aattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcacaatgt 1220393  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  1220394 tccgttgttttaacatct 1220411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 42 - 159
Target Start/End: Original strand, 7223067 - 7223184
Alignment:
Q  42 tgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgttct 141  Q
    |||||||||| |||||| |||||||||||||||||||| |||| ||||||||||||||||||||||   ||||||||||||||||||||||||||||||     
T  7223067 tgttttcatcttaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcagatacatattttatgatgaatcacaatgttcc 7223166  T
Q  142 gtcgttttaacatctctt 159  Q
     || ||||||||||||||    
T  7223167 atcattttaacatctctt 7223184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 24445703 - 24445820
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  24445703 aattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcacaatgt 24445802  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  24445803 tccgttgttttaacatct 24445820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 9979572 - 9979455
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||| ||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  9979572 aattgttttcattctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcacaatgt 9979473  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  9979472 tccgttgttttaacatct 9979455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 2521928 - 2522067
Alignment:
Q  87 attatatgctctcttaatcagtccatacatattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcga 186  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||         ||  |  |||||||    
T  2521928 attatatgctctcttaatcaactcatacatattttatgatgaatcacaatgttccgtcattttaacatctcttcttt----caaagaatttttttatcga 2522023  T
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagttg 230  Q
    ||| ||||||||||| ||| ||||||||||||||||||||||||    
T  2522024 atacgttattgaacccgtgcgaagcacgggtttgtaactagttg 2522067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 22323780 - 22323829
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||    
T  22323780 ttatcgaatatgttactgaacccgtgcgaagcacgggtttgtaactagtt 22323829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 25540842 - 25540891
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| ||||||||||  ||| |||||||||||||||||||||||    
T  25540842 ttatcgaatacgttattgaactcgtgcgaagcacgggtttgtaactagtt 25540891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 2521884 - 2521928
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaata 58  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||    
T  2521884 catcattgattcctttattggttccaatagttttcatcctaaata 2521928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 229
Target Start/End: Complemental strand, 13456772 - 13456734
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  13456772 gttattgaacccgtgcgaagcacgggtttgtaactagtt 13456734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 13456850 - 13456800
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||| | |||||||  |||||||||||| ||||    
T  13456850 ccatacatattttatgatgaattataatgttccatcgttttaacatatctt 13456800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 21800420 - 21800470
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagttg 230  Q
    |||||||||| |||||||||||  || ||||||||||||| ||||||||||    
T  21800420 ttatcgaatacgttattgaaccaatgcgaagcacgggtttataactagttg 21800470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 11932850 - 11932801
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||  |||||||||| ||| |||||||| ||||||||||||||    
T  11932850 ttatcgaatacattattgaacccgtgcgaagcacgagtttgtaactagtt 11932801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 15276536 - 15276585
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||| ||||| ||||||||||| ||| |||||||| ||||||||||||||    
T  15276536 ttattgaatacgttattgaacccgtgcgaagcacgagtttgtaactagtt 15276585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 22373188 - 22373139
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| ||||||||||| ||| |||||||  ||||||||||||||    
T  22373188 ttatcgaatacgttattgaacccgtgcgaagcacatgtttgtaactagtt 22373139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 35041990 - 35042039
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||| |||| ||||||||||| ||| ||| |||||||||||||||||||    
T  35041990 ttatcaaatacgttattgaacccgtgcgaaacacgggtttgtaactagtt 35042039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 33814870 - 33814918
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    ||||| |||| |||| |||||| ||| ||||||||||||||||||||||    
T  33814870 ttatcaaatacgttactgaacccgtgcgaagcacgggtttgtaactagt 33814918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 14 - 233
Target Start/End: Original strand, 31620430 - 31620645
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||| | ||||||||||| |||||||| |||| |||||||||||||||||||||| |||||    
T  31620430 catcattgattcctttattggttccaatagttttcatcctaaaaattatgtcaattcataatctcataaactgattatatgctctcttaatcagcccata 31620529  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||        |    |  |||||||||| ||||||||||| ||| |||||||    
T  31620530 catattttatgatgaatcacaatgttctgtcgttttaacatctcttctttcaaagattt----tttttatcgaatacgttattgaacccgtgcgaagcac 31620625  T
Q  214 gggtttgtaactagttgata 233  Q
    ||||||||||||||| ||||    
T  31620626 gggtttgtaactagtagata 31620645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 15 - 159
Target Start/End: Complemental strand, 38844683 - 38844539
Alignment:
Q  15 atcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatac 114  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  38844683 atcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccatac 38844584  T
Q  115 atattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||  || ||||||||||||||    
T  38844583 atattttatgatgaatcacaatgttccatcattttaacatctctt 38844539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 34692856 - 34692998
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||  ||||    
T  34692856 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagctcata 34692955  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| |||||||||| ||||    
T  34692956 catattttatgatgaatcacaatgttccgtcgttttaatatct 34692998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 34688328 - 34688470
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  34688328 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccata 34688427  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| |||||||||| ||||    
T  34688428 catattttatgatgaatcacaatgttccgtcgttttaatatct 34688470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 16031096 - 16030947
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||||||||||| ||||  ||||||| |||||||||||||  ||||    
T  16031096 catcattgtttcctttattagttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactaattatattctctcttaatcagctcata 16030997  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattt 163  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16030996 catattttatgatgaatcacaatgttccgtcgttttaacatctcttattt 16030947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 44407124 - 44407336
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| |||||||||| |||| |||||||||||||||||||| |||||||||| ||||||| | |||| ||||||||||||| |||||||| |||||    
T  44407124 catcattgattcctttattagttccaattgttttcatcctaaatattatgtcaatttctaatcttataaactgattatatgctcttttaatcagcccata 44407223  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||        |    |  |||||||||| ||||||||||| ||| |||||||    
T  44407224 catattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcgaagattt---ttttttatcgaatacgttattgaacccgtgcgaagcac 44407320  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  44407321 gggtttgtaactagtt 44407336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 41829560 - 41829421
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  41829560 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccata 41829461  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaaca 153  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  41829460 catattttatgatgaatcataatgttccgtcgttttaaca 41829421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 47136043 - 47136184
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| |||||| |||||    
T  47136043 catcattggttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagcccata 47136141  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  47136142 catattttatgatgaatcacaatgttccgtcgttttaacatct 47136184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 52521126 - 52520985
Alignment:
Q  15 atcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatac 114  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||||  |||||    
T  52521126 atcattggttcctttattggttccaattattttcatcctaaatattatgtcaattcataatctcataaactgattatatgctctcttaatcagctcatac 52521027  T
Q  115 atattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
     ||||||||||||||||||||||||| |||||||||||||||    
T  52521026 gtattttatgatgaatcacaatgttccgtcgttttaacatct 52520985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 18814960 - 18815102
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| || ||| |||||    
T  18814960 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaaacagaccata 18815059  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  18815060 catattttatgatgaatcacaatgttccgtcgttttaacatct 18815102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 17672220 - 17672365
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||| ||||||||| |||||||||||||||||||| |||   ||| ||||||||||||||||| |||||    
T  17672220 catcattgtttcctttattggttccaatggttttcgtcctaaatattatgtcaattcctaatctcataaattaattttatgctctcttaatcagcccata 17672319  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  17672320 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 17672365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 48341084 - 48341229
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||| |||||||||||||||||||| |||| ||||| ||||| |||||||||| |||||    
T  48341084 catcattggttcctttattagttccaattgttttcattctaaatattatgtcaattcctaatctcaaaaactgattagatgctttcttaatcagcccata 48341183  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||| || | |||||||||||||||||    
T  48341184 catattttatgatgaatcacaatattttatcgttttaacatctctt 48341229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 26 - 229
Target Start/End: Original strand, 45005550 - 45005748
Alignment:
Q  26 ctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatga 125  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||  |||||||||| |||||||||| | |||||||||||||||    
T  45005550 ctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactaattatatgctttcttaatcagcctatacatattttatga 45005649  T
Q  126 tgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcacgggtttgtaact 225  Q
    |||||||||||| ||  ||||||||||||||||| |||          || |  ||||||||||| |||||||||| ||| |||||||||||||||||||    
T  45005650 tgaatcacaatgctccatcgttttaacatctcttctttcaaag-----aattttttatcgaatatattattgaacccgtgcgaagcacgggtttgtaact 45005744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 52310603 - 52310744
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| |||||   ||||    
T  52310603 catcattggttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcatctcata 52310701  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  52310702 catattttatgatgaatcacaatgttccgtcgttttaacatct 52310744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 5426744 - 5426885
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||||||| | ||||||||||| |||||||| |||| ||||||||| ||||| |||||| |||||    
T  5426744 catcattggttccttt-ttggttccaattgttttcatcctaaacattatgtcaattcataatctcataaactgattatatgatctctaaatcagcccata 5426842  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  5426843 catattttatgatgaatcacaatgttccgttgttttaacatct 5426885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 10694287 - 10694146
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||| |||||||||||| |||||    
T  10694287 catcattggttccttt-ttgtttccaattgttttcatcctaaatattatgtcaattcttaatctcataaactgattatatgatctcttaatcagcccata 10694189  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    | ||||||||||||||||||||||||  |||||||||||||||    
T  10694188 cgtattttatgatgaatcacaatgtttcgtcgttttaacatct 10694146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 26 - 159
Target Start/End: Original strand, 36682819 - 36682952
Alignment:
Q  26 ctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatga 125  Q
    ||||||||| || |||||||||||||||||||| |||||||||||||||||||| ||||  |||||||| | |||||||||| |||||||||||||||||    
T  36682819 ctttattggatccaattgttttcatcctaaatattatgtcaattcctaatctcataaactaattatatgttttcttaatcagcccatacatattttatga 36682918  T
Q  126 tgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||| || ||||||||||||||||||    
T  36682919 tgaatcacaatgctccgtcgttttaacatctctt 36682952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 16300810 - 16300952
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataat-atgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccat 112  Q
    |||||||||||||||| ||||||| ||||||||||||||||||  || ||||||||||||||||||| |||| ||||||||| ||||| |||||  ||||    
T  16300810 catcattggttccttt-ttggttccaattgttttcatcctaaaacattatgtcaattcctaatctcataaactgattatatgatctctaaatcaacccat 16300908  T
Q  113 acatattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||||||||||||||||||||||||||| || ||||||||||||    
T  16300909 acatattttatgatgaatcacaatgttccgttgttttaacatct 16300952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 51965328 - 51965201
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacata-ttttatgatga 128  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||||||| |||||||||||    
T  51965328 attggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagcacatacatatttttatgatga 51965229  T
Q  129 atcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||| ||||||||||||||    
T  51965228 atcacaatgttctctcgttttaacatct 51965201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 50561818 - 50561964
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||  |||||||||||| ||||||| |||||||||||||||||  | |||| ||||||||| ||||| |||||| |||||    
T  50561818 catcattggttccttt-ttggtttcaattgttttcattctaaatattatgtcaattcctaatc--ataaactgattatatgatctctaaatcagcccata 50561914  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattt 163  Q
     ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  50561915 tatattttatgatgaatcacaatgttccatcgttttaacatcttttattt 50561964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 4891876 - 4891993
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  4891876 aattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcacaatgt 4891975  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  4891976 tccgttgttttaacatct 4891993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 29186611 - 29186494
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  29186611 aattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcacaatgt 29186512  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  29186511 tccgttgttttaacatct 29186494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 33361479 - 33361596
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||| ||||||||||||||||||||||||    
T  33361479 aattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcataaatattttatgatgaatcacaatgt 33361578  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  33361579 tccgttgttttaacatct 33361596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 41962437 - 41962301
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| |||         ||||||||||  ||||    
T  41962437 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgat---------tcttaatcagctcata 41962347  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  41962346 catattttatgatgaatcacaatgttccgtcgttttagcatctctt 41962301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 12245375 - 12245171
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||| |||||||| |  |||||||| ||||  |       |||||||||||||  ||||    
T  12245375 catcattgtttcctttattggttccaattgttttcatcataaatattatgtcaaattataatctcataaactaa-------ctctcttaatcagctcata 12245283  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||         ||  |  ||||||||||| |||||||||| |||  ||||||    
T  12245282 catattttatgatgaatcacaatgttccgtcgttttaatatctcttcttt----cgaagaatttttttatcgaatatattattgaacccgtgcaaagcac 12245187  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  12245186 gggtttgtaactagtt 12245171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 17707377 - 17707267
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaa 129  Q
    |||||||| |||| ||||||||||||||| ||||||||||| |||||||| |||  |||||| ||| ||||||||||| ||||| ||||||||| |||||    
T  17707377 attggttcaaattattttcatcctaaatattatgtcaattcataatctcataaattgattatgtgcactcttaatcagcccatatatattttataatgaa 17707278  T
Q  130 tcacaatgttc 140  Q
    |||| ||||||    
T  17707277 tcacgatgttc 17707267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 24294795 - 24294845
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  24294795 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatatctt 24294845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 39760134 - 39760084
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  39760134 ccatacatattttatgatgaatcacaatattccgtcgttttaacatatctt 39760084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 43254669 - 43254619
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  43254669 ccatacatattttatgatgaatcataatgttccgtcgttttaacatatctt 43254619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 50395083 - 50395033
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  50395083 ccatacatattttatgatgaatcataatgttccgtcgttttaacatatctt 50395033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 24294862 - 24294910
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    ||||| |||| ||||||||||| ||| ||||||||||||||||||||||    
T  24294862 ttatcaaatacgttattgaacccgtgcgaagcacgggtttgtaactagt 24294910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 28631811 - 28631853
Alignment:
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||| ||| |||||||||||||||||||||||    
T  28631811 atatgttattcaacccgtgcgaagcacgggtttgtaactagtt 28631853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 229
Target Start/End: Complemental strand, 50395004 - 50394966
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  50395004 gttattgaacccgtgcgaagcacgggtttgtaactagtt 50394966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 38844522 - 38844473
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| ||||||||||| ||  ||| |||||||||||||||||||    
T  38844522 ttatcgaatacgttattgaacccgtacgaaacacgggtttgtaactagtt 38844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 38896814 - 38896859
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagttga 231  Q
    |||| |||||| |||| ||| |||||||||||||||||||||||||    
T  38896814 aatacgttattcaacccgtgcgaagcacgggtttgtaactagttga 38896859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 43254592 - 43254555
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  43254592 gttattgaacccgtgcgaagcacgggtttgtaactagt 43254555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 29840732 - 29840688
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagttg 230  Q
    |||| |||||| |||| ||| ||||||||||||||||||||||||    
T  29840732 aatacgttattcaacccgtgcgaagcacgggtttgtaactagttg 29840688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 43118936 - 43118981
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagttgata 233  Q
    ||||||||||| |||||| |  ||||||||||||||||||||||||||    
T  43118936 aatatgttattcaacctgcg--aagcacgggtttgtaactagttgata 43118981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 8e-56; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 5963447 - 5963581
Alignment:
Q  16 tcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccataca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||| |||||||    
T  5963447 tcattggttcctttattggttctaattgttttcatcctaaatattatgtcaattcctaatctcataaattgattatatgctctcttaatcagcccataca 5963546  T
Q  116 tattttatgatgaatcacaatgttctgtcgtttta 150  Q
    ||||||||||||||||||||||||| |||||||||    
T  5963547 tattttatgatgaatcacaatgttccgtcgtttta 5963581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 8925436 - 8925225
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||| |||| |||||||||||||||| ||||| |||||    
T  8925436 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcctaatatcataaactgattatatgctctcttgatcagcccata 8925337  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||         ||  |  |||||||||| ||||||||||| ||| | |||||    
T  8925336 catattttatgatgaatcacaatgttccgtcgttttaacatctcttcttt----caaagaatttttttatcgaatacgttattgaacccgtgcggagcac 8925241  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  8925240 gggtttgtaactagtt 8925225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 17470491 - 17470636
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||  ||||    
T  17470491 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgctctcttaatcagcacata 17470590  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||   |||||||||||||||||    
T  17470591 catattttatgatgaatcacaatgtttcatcgttttaacatctctt 17470636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 17582723 - 17582578
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||  ||||    
T  17582723 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaatttctaatctcataaactgattatatgctctcttaatcagcacata 17582624  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||   |||||||||||||||||    
T  17582623 catattttatgatgaatcacaatgtttcatcgttttaacatctctt 17582578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 42688314 - 42688459
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| |||| ||||||||| |||||||| ||| |||||    
T  42688314 catcattggttcctttattggttcaaattgttttcatcataaatattatgtcaattcctaatctcataaactgattatatgttctcttaaacagcccata 42688413  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  42688414 catattttacgatgaatcacaatgttccgtcgttttaacatctctt 42688459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 33031617 - 33031762
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||  ||||||| |||| |||||||||||||||||||||| |||||    
T  33031617 catcattggttcctttattggtttcaattgttttcatcctaaatattatgtcaattctgaatctcataaactgattatatgctctcttaatcagcccata 33031716  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  33031717 catattttatgatgaatcataatgttccgtcgttttaacatatctt 33031762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 42918629 - 42918773
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||  |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |  ||    
T  42918629 catcattggttccttt-ttggtttcaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagccggta 42918727  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  42918728 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 42918773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 47175225 - 47175370
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||  |||||    
T  47175225 catcattggtttctttattggttccaattgttttcatcctaaatattatgtcaattcataatctcataaactgattatatgctctcttaatcaacccata 47175324  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||  || ||||||||||||||    
T  47175325 catattttatgatgaatcacaatgttccatcattttaacatctctt 47175370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 23299220 - 23299080
Alignment:
Q  15 atcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatac 114  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  23299220 atcattgattccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctcttaatcagcccatac 23299122  T
Q  115 atattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  23299121 atattttatgatgaatcacaatgttccgtcattttaacatct 23299080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 33638172 - 33638031
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||| | |||| ||||||| | ||||| |||||| |||||    
T  33638172 catcattggttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaatctaataaactgattataagatctctaaatcagcccata 33638074  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  33638073 catattttatgatgaatcacaatgttccgtcgttttaacatct 33638031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 30 - 159
Target Start/End: Original strand, 19521912 - 19522041
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaa 129  Q
    |||||||| ||||||||||| |||||||| ||||||||||| |||||||| |||| | |||||||||||||||||||| |||||||||||||||||||||    
T  19521912 attggttccaattgttttcaacctaaatattatgtcaattcataatctcataaactggttatatgctctcttaatcagcccatacatattttatgatgaa 19522011  T
Q  130 tcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||| ||||||||||||||||||    
T  19522012 tcacaatgttccgtcgttttaacatctctt 19522041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 49145789 - 49145649
Alignment:
Q  15 atcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatac 114  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||  | |||| ||||||||| ||||| |||||||||||||    
T  49145789 atcattggttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaatcaaataaactgattatatgatctctaaatcagtccatac 49145691  T
Q  115 atattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  49145690 atattttatgatgaatcacaatgttccgttgttttaacatct 49145649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 27 - 159
Target Start/End: Original strand, 14309618 - 14309750
Alignment:
Q  27 tttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgat 126  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||  |||||||||| ||||||    
T  14309618 tttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagctcatacatattctatgat 14309717  T
Q  127 gaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||| |||||| ||||||||||||||||||    
T  14309718 gaatcacgatgttccgtcgttttaacatctctt 14309750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 27734547 - 27734408
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||||||| ||||| |||||| |||||    
T  27734547 catcattggttccttt-ttggttccaattgttttcatcctaattattatgtcaattcctaatctcataaactgattatatgatctctaaatcagcccata 27734449  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    |||||||||| ||||||  |||||||| |||||||||||||||    
T  27734448 catattttataatgaat--caatgttccgtcgttttaacatct 27734408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 9150089 - 9150215
Alignment:
Q  14 catcattggttcctttattggttc-taattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccat 112  Q
    |||||||||||||||| ||||||| |  |||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| |||||| ||||    
T  9150089 catcattggttccttt-ttggttcctttttgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagcccat 9150187  T
Q  113 acatattttatgatgaatcacaatgttc 140  Q
    ||||||||||||||||||||||||||||    
T  9150188 acatattttatgatgaatcacaatgttc 9150215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 4848863 - 4849004
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||| ||| ||||||| ||||||||||| | |||| | |||||||||||||||||||| |||| ||||||||| ||||| |||||| |||||    
T  4848863 catcattggttctttt-ttggttccaattgttttcaacttaaacattatgtcaattcctaatctcataaactgattatatgatctctaaatcagcccata 4848961  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| || ||||||| ||||    
T  4848962 catattttatgatgaatcacaatgttccgttgttttaagatct 4849004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 11500619 - 11500757
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| |||| ||||||||||||| |||||     ||||    
T  11500619 catcattagttcctttattggttccaattgttttcatcataaatattatgtcaattcctaatctcataaactgattatatgctctgttaat-----cata 11500713  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
     |||  ||||||||||||||||||||| ||||||||||||||||||    
T  11500714 aata--ttatgatgaatcacaatgttccgtcgttttaacatctctt 11500757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 39649467 - 39649341
Alignment:
Q  30 attggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaa 129  Q
    |||||||  |||| ||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||| ||||||  ||||||||||||||||||||    
T  39649467 attggtttcaattattttcatcctaaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaa 39649368  T
Q  130 tcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||| || ||||||||||||    
T  39649367 tcacaatgttccgttgttttaacatct 39649341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 42826854 - 42826711
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| |||| |||| |||||||||| |||||||||| ||||||||| |||    ||| | |||||||||||||| | |||    
T  42826854 catcattgtttcctttattggttccaattatttttatcctaaatattatgtcaatttctaatctcataaatt--ttacacgctctcttaatcagcctata 42826757  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  42826756 catattttatgatgaatcacaatgttccgtcgttttaacatctctt 42826711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 48528273 - 48528151
Alignment:
Q  34 gttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcac 133  Q
    |||| |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  ||||||||||||||||||||||||    
T  48528273 gttccaattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcac 48528174  T
Q  134 aatgttctgtcgttttaacatct 156  Q
    ||||||| || ||||||||||||    
T  48528173 aatgttccgttgttttaacatct 48528151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 17170802 - 17170919
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  17170802 aattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcacaatgt 17170901  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  17170902 tccgttgttttaacatct 17170919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 34 - 155
Target Start/End: Complemental strand, 31898304 - 31898183
Alignment:
Q  34 gttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcac 133  Q
    |||| |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  ||||||||||||||||||||||||    
T  31898304 gttccaattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcac 31898205  T
Q  134 aatgttctgtcgttttaacatc 155  Q
    ||||||| || |||||||||||    
T  31898204 aatgttccgttgttttaacatc 31898183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 23765965 - 23765847
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||| ||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||| ||| ||||||  ||||    
T  23765965 catcattgattcatttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctttctaaatcaggtcata 23765866  T
Q  114 catattttatgatgaatca 132  Q
    |||||||||||||||||||    
T  23765865 catattttatgatgaatca 23765847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 17478673 - 17478753
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatg 94  Q
    |||||||  ||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | |||| |||||||||    
T  17478673 catcattatttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctaataaactgattatatg 17478753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 17574541 - 17574461
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatg 94  Q
    |||||||  ||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | |||| |||||||||    
T  17574541 catcattatttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctaataaactgattatatg 17574461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 17483108 - 17483188
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatg 94  Q
    |||||||  ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||| | |||| |||||||||    
T  17483108 catcattatttcctttattggttccaattgtttttatcctaaatattatgtcaattcctaatctaataaactgattatatg 17483188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 17570106 - 17570026
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatg 94  Q
    |||||||  ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||| | |||| |||||||||    
T  17570106 catcattatttcctttattggttccaattgtttttatcctaaatattatgtcaattcctaatctaataaactgattatatg 17570026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 4850452 - 4850494
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    ||||||||||| |||| ||||||||||||||||||||||||||    
T  4850452 aatatgttattcaacccgtgtgaagcacgggtttgtaactagt 4850494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 6911476 - 6911426
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||| ||||    
T  6911476 ccatacatattttatgatgaattataatgttccgtcgttttaacatatctt 6911426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 42996941 - 42996983
Alignment:
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  42996941 atatgttattcaacctgtgcgaagcacgggtttgtaactagtt 42996983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 47573454 - 47573404
Alignment:
Q  109 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||| ||||    
T  47573454 ccatacatattttatgatgaattataatgttccgtcgttttaacatatctt 47573404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 17470654 - 17470715
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagttgatagaagaaaa 241  Q
    |||||||||| |||||||||||  || |||||||||||||||| ||||||  ||||||||||    
T  17470654 ttatcgaatacgttattgaacccctgcgaagcacgggtttgtagctagttactagaagaaaa 17470715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 17582560 - 17582499
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagttgatagaagaaaa 241  Q
    |||||||||| |||||||||||  || |||||||||||||||| ||||||  ||||||||||    
T  17582560 ttatcgaatacgttattgaacccctgcgaagcacgggtttgtagctagttactagaagaaaa 17582499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 23476628 - 23476587
Alignment:
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    |||||||||| |||| ||||||||||||||||||||||||||    
T  23476628 atatgttattcaacccgtgtgaagcacgggtttgtaactagt 23476587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 9226062 - 9226020
Alignment:
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||| ||| |||||||||||||||||||||||    
T  9226062 atatgttattcaacccgtgcgaagcacgggtttgtaactagtt 9226020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 38434319 - 38434277
Alignment:
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||| ||| |||||||||||||||||||||||    
T  38434319 atatgttattcaacccgtgcgaagcacgggtttgtaactagtt 38434277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 229
Target Start/End: Complemental strand, 47573370 - 47573332
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  47573370 gttattgaacccgtgcgaagcacgggtttgtaactagtt 47573332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 6911396 - 6911359
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  6911396 gttattgaacccgtgcgaagcacgggtttgtaactagt 6911359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 12960611 - 12960652
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagttgat 232  Q
    |||||| |||| ||| ||||||||||||||||||||||||||    
T  12960611 gttattcaacccgtgcgaagcacgggtttgtaactagttgat 12960652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 42826695 - 42826646
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||  ||||||||||  || |||||||||||||||||||||||    
T  42826695 ttatcgaatacattattgaacccttgcgaagcacgggtttgtaactagtt 42826646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 47175387 - 47175435
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    |||||||||| ||||||||||| ||| |||||||| |||| ||||||||    
T  47175387 ttatcgaatacgttattgaacccgtgcgaagcacgagtttataactagt 47175435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1634 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold1634
Description:

Target: scaffold1634; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 532 - 387
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  532 catcattggttcctttattggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccata 433  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||    
T  432 catattttatgatgaatcacaatattccatcgtgttaacatctctt 387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 106; Significance: 8e-53; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 25859 - 25714
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||| |||||    
T  25859 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcataatctcataaactgattatatgctctcttaatcagcccata 25760  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  25759 catattttatgatgaatcacaatgttccatcgttttaacatctctt 25714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 25662 - 25614
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  25662 ttatcgaatacgttattgaacccgtgcgaagcacgggtttgtaactagt 25614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 106; Significance: 8e-53; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 101475 - 101616
Alignment:
Q  18 attggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacata 117  Q
    |||| ||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||  |||||||||||||||||||||  ||||||||    
T  101475 attgtttcctttattggttccaattgttttcatcataaatattatgtcaattcctaatctcataaactaattatatgctctcttaatcagctcatacata 101574  T
Q  118 ttttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  101575 ttttatgatgaatcacaatgttctgtcgttttaacatctctt 101616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 101634 - 101680
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaacta 226  Q
    ||||||||||  |||||||||| ||| ||||||||||||||||||||    
T  101634 ttatcgaatacattattgaacccgtgcgaagcacgggtttgtaacta 101680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 106; Significance: 8e-53; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 10661 - 10806
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||| |||||    
T  10661 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcataatctcataaactgattatatgctctcttaatcagcccata 10760  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  10761 catattttatgatgaatcacaatgttccatcgttttaacatctctt 10806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 10858 - 10906
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagt 228  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  10858 ttatcgaatacgttattgaacccgtgcgaagcacgggtttgtaactagt 10906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 29848 - 29638
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| || ||    
T  29848 catcattgtttccttt-ttggttccaattattttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagcccgta 29750  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    |||||||||||| |||||||||||||| |||||||||||||||||| |||        |    |  |||||||||| ||||||||||| ||| |||||||    
T  29749 catattttatgaggaatcacaatgttccgtcgttttaacatctcttctttcgaagattt----tttttatcgaatacgttattgaacccgtgcgaagcac 29654  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  29653 gggtttgtaactagtt 29638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1891 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold1891
Description:

Target: scaffold1891; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 161 - 306
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||  ||||    
T  161 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagctcata 260  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
     ||||||||||||||||||||| |||| ||| ||||||||||||||    
T  261 tatattttatgatgaatcacaaagttccgtcattttaacatctctt 306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 5231 - 5376
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||  ||||    
T  5231 catcattgattcctttattggttccaatagttttcatcctaaatattatgtcaattcctaatctcataaactgattatatgctctcttaatcagctcata 5330  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    |||||||||| |||||| ||||||||| || |||||||||||||||    
T  5331 catattttataatgaattacaatgttccgttgttttaacatctctt 5376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 2919 - 2708
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||   | ||||| |||| ||||||||||||||||||||||  ||||    
T  2919 catcattggtttctttattggttccaattgttttcatcctaaatattatgtcaatttgcattctcataaactgattatatgctctcttaatcagctcata 2820  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcac 213  Q
    |||||||| |||||||||||||||||| ||| |||||| ||||||| |||         ||  |  |||||||||| ||||||||||| |||||||||||    
T  2819 catattttttgatgaatcacaatgttccgtcattttaatatctcttcttt----cgaagaatttttttatcgaatacgttattgaacccgtgtgaagcac 2724  T
Q  214 gggtttgtaactagtt 229  Q
    ||||||||||||||||    
T  2723 gggtttgtaactagtt 2708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 12423 - 12282
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    ||||||||||||| || ||||||||||||||||| |||||||||| ||||||||||| |||||||| |||| ||||||||| ||||| |||||| |||||    
T  12423 catcattggttccctt-ttggttctaattgtttttatcctaaatattatgtcaattcataatctcataaactgattatatgatctctaaatcagcccata 12325  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  12324 catattttatgatgaatcacaatgttccgtcgttttaacatct 12282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 12262 - 12213
Alignment:
Q  180 ttatcgaatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| ||||||||||| ||| ||||||| |||||||||||||||    
T  12262 ttatcgaatacgttattgaacccgtgcgaagcacaggtttgtaactagtt 12213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 120666 - 120815
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||||||||||| |||||||| |||| |||||| ||| ||||||| |||||||| |||| ||||||||||||||||||| |  |||||    
T  120666 catcattggttcctttattggttccaattgttt-catcttaaatattatatcaattcataatctcataaactgattatatgctctcttaattaacccata 120764  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatctcttatttt 164  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  120765 catattttatgatgaatcacaatgttccatcgttttaacatctcttctttt 120815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 10230 - 10090
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||  |||||||||  ||||  ||||| |||||    
T  10230 catcattggttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaatctcataaaatgattatatgacctctagatcagcccata 10132  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatc 155  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  10131 catattttatgatgaatcacaatgttccgtcgttttaacatc 10090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 4462 - 4322
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||| |||||||||||||||||||| |||| ||||||||| ||||| |||||| |||||    
T  4462 catcattggttccttt-ttggttccaattgttttcatcataaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagcccata 4364  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatc 155  Q
    || || ||||||||||||||||||||| ||||||||||||||    
T  4363 caaatgttatgatgaatcacaatgttccgtcgttttaacatc 4322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 10911 - 10771
Alignment:
Q  14 catcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccata 113  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||| |||||||||||||||||||| |||| ||||||||| ||||| |||||| |||||    
T  10911 catcattggttccttt-ttggttccaattgttttcatcataaatattatgtcaattcctaatctcataaactgattatatgatctctaaatcagcccata 10813  T
Q  114 catattttatgatgaatcacaatgttctgtcgttttaacatc 155  Q
    || || ||||||||||||||||||||| ||||||||||||||    
T  10812 caaatgttatgatgaatcacaatgttccgtcgttttaacatc 10771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 15 - 228
Target Start/End: Complemental strand, 48735 - 48526
Alignment:
Q  15 atcattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatac 114  Q
    |||||||||| |||||||||||| ||||||||| |||||||||| ||||| | ||  || ||||| |||| ||||||||||||||||||||||  |||||    
T  48735 atcattggtttctttattggttccaattgttttaatcctaaatattatgttagtttgtattctcataaactgattatatgctctcttaatcagctcatac 48636  T
Q  115 atattttatgatgaatcacaatgttctgtcgttttaacatctcttattttnnnnnnntaaaataattatcgaatatgttattgaacctgtgtgaagcacg 214  Q
    ||||||||||||||||||||||||| |||| |||||| ||||||| |||        |||  |  |||||||||| ||||||||||| ||| |||||||     
T  48635 atattttatgatgaatcacaatgttatgtcattttaatatctcttcttt----cgaataatttttttatcgaatacgttattgaacccgtgcgaagcaca 48540  T
Q  215 ggtttgtaactagt 228  Q
    ||||||||||||||    
T  48539 ggtttgtaactagt 48526  T

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Target: scaffold0115 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 3178 - 3314
Alignment:
Q  17 cattggttcctttattggttctaattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacat 116  Q
    |||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||| ||||| ||| |  ||||||||    
T  3178 cattcgttccttt-ttggttccaattgttttcatcctaaatattatgtcaattcctaat-tcataaactgattatatgatctctaaattaccccatacat 3275  T
Q  117 attttatgatgaatcacaatgttctgtcgttttaacatc 155  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  3276 attttatgatgaatcacaatgttccgtcgttttaacatc 3314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 13509 - 13626
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  13509 aattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcacaatgt 13608  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  13609 tccgttgttttaacatct 13626  T

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Target: scaffold0057 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 18891 - 18774
Alignment:
Q  39 aattgttttcatcctaaataatatgtcaattcctaatctcacaaacagattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgt 138  Q
    |||||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  18891 aattgttttcatcctaaaaattatgtcaattcctaatctcataaactgattatatgatctctaaatcagctcatacatattttatgatgaatcacaatgt 18792  T
Q  139 tctgtcgttttaacatct 156  Q
    || || ||||||||||||    
T  18791 tccgttgttttaacatct 18774  T

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Target: scaffold0169 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 16982 - 17055
Alignment:
Q  86 gattatatgctctcttaatcagtccatacatattttatgatgaatcacaatgttctgtcgttttaacatctctt 159  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16982 gattatatgctctcttaatcagctcatacatattttatgatgaatcacaatgttccgtcgttttaacatctctt 17055  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 231820 - 231866
Alignment:
Q  110 catacatattttatgatgaatcacaatgttctgtcgttttaacatct 156  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||    
T  231820 catacatattttatgatgaatcacaatgttccgttgttttaacatct 231866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 8218 - 8175
Alignment:
Q  186 aatatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||    
T  8218 aatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 8175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 230
Target Start/End: Complemental strand, 143251 - 143212
Alignment:
Q  191 gttattgaacctgtgtgaagcacgggtttgtaactagttg 230  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  143251 gttattcaacctgtgcgaagcacgggtttgtaactagttg 143212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 52734 - 52692
Alignment:
Q  187 atatgttattgaacctgtgtgaagcacgggtttgtaactagtt 229  Q
    |||||||||| |||| ||| |||||||||||||||||||||||    
T  52734 atatgttattcaacccgtgcgaagcacgggtttgtaactagtt 52692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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