View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17991_high_41 (Length: 321)
Name: NF17991_high_41
Description: NF17991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17991_high_41 |
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Alignment Details
Target: chr1 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 45147838 - 45148145
Alignment:
| Q |
1 |
ctagcttgaatgaatttagagattctcactgctttcaatcatttgactcttctcaattgtaggtggataatacatctgcacgggtgcagcaatggggtgg |
100 |
Q |
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| T |
45147838 |
ctagcttgaatgaatttagagattctcactgctttcaatcatttgactcttctcaattgtaggtggataatacatctgcacgggtgcagcaatggggtgg |
45147937 |
T |
|
| Q |
101 |
acaaaccgtagaagttgacagcaatggggtggacaagccatagaagttgacgagacattgtattccgcataaagttgcacgtatctcccacttcctacct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45147938 |
acaaaccgtagaagttgacagcaatggggtggacaagccatagaagttgacgagacattgtattccgcataaagttgcacgtatctcccacttcctacct |
45148037 |
T |
|
| Q |
201 |
gttctcttgtaaaattagggataatggtctcaaaaatcctttctgaccattttgcattgtaatgtagtagtttgtttctttcaattaggttcatgacata |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45148038 |
gttctcttgtaaaattagggataatggtctcaaaaatcctttctgaccattttgcattgtaatgtagtagtttgtttctttcaattaggttcatgacata |
45148137 |
T |
|
| Q |
301 |
atctgtct |
308 |
Q |
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|||||||| |
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| T |
45148138 |
atctgtct |
45148145 |
T |
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