View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17991_high_8 (Length: 439)
Name: NF17991_high_8
Description: NF17991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17991_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 19 - 331
Target Start/End: Complemental strand, 18001043 - 18000732
Alignment:
| Q |
19 |
attttcttctttctgtctcaatttatttcataattatttgtcattctgtaagattatataaaattctttcctcaatatttgaaaatataggagatacttt |
118 |
Q |
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| T |
18001043 |
attttcttctttctgtctcaatttatttcataattatttgtcattctgtaagattatataaaattctttcctcaatatttgaaaata--ggagatacttt |
18000946 |
T |
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| Q |
119 |
tgaaattagaaataatgacataaaagatgcagagggtaactcctattatagaaaagatggtgaaaacttactaatgtgatattcacatgtagagagaaga |
218 |
Q |
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| T |
18000945 |
tgaaattagaaataatgacataaaagatgtagagggtaactcctatcatataaaagatggtgaaaacttactaatgtggtattcacatgtagagagaaga |
18000846 |
T |
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| Q |
219 |
cgtgaagataaatattgttagtaagatttgatatga-tannnnnnnnggcagttggctcttgcgggaatcgttgcatctcattcaggttagtattatgaa |
317 |
Q |
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| T |
18000845 |
cgtgaagataaatattgttagcaagatctgatatgatttttttttttggcagttggctcttgcgggaatcgttgcatctcattctggttagtattatgaa |
18000746 |
T |
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| Q |
318 |
tatttccggtcccc |
331 |
Q |
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|||||| ||||||| |
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| T |
18000745 |
tatttctggtcccc |
18000732 |
T |
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