View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17991_low_34 (Length: 336)
Name: NF17991_low_34
Description: NF17991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17991_low_34 |
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Alignment Details
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 36536277 - 36536024
Alignment:
| Q |
1 |
ttctttcctttacatgatgtggagaaaattgcttattttgaaagcggaggatttttgtttatatgatactatgcttcttaatagcaatatcaacaaatta |
100 |
Q |
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|||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
36536277 |
ttctttcctttacatgatgtggaggaaattgattattttgaaagcggaggatttttgtttatatgatactatgcttcttaatagcaatatcaacgaatta |
36536178 |
T |
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| Q |
101 |
agcattaactgtaacaaaaggattatggtgggagctgagggcttaagattgaataagactttcttgtttagtttattatgtgtgaatcctttgacaatga |
200 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36536177 |
agcattaactgtaacataaggattatggtgggagctgagggcttaagattgaataagactttcttgtttagtttattatgtgtgaatcctttgacaatga |
36536078 |
T |
|
| Q |
201 |
ttgtgtaagttctctatagttgcatgtgttaaaatagttcgactagagttagta |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
36536077 |
ttgtgtaagttctctatagttgcatgtgttaaaatagttcggctagagttagta |
36536024 |
T |
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