View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17991_low_62 (Length: 241)
Name: NF17991_low_62
Description: NF17991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17991_low_62 |
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Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 228
Target Start/End: Complemental strand, 34826800 - 34826589
Alignment:
| Q |
17 |
atatacaagatacaagaaagaaaacctgccacaaaatttcagtgtgggagtgtatgagcttggtgtaggttcgtcgactagtgatttagggtgtgaaatt |
116 |
Q |
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| T |
34826800 |
atatacaagatacaagaaagaaaacctgccacaaaatttcagtgtgggagtgtatgagcttggtgtaggttcgtcgactagtgatttagggtgtgaaatt |
34826701 |
T |
|
| Q |
117 |
tacaagcttgcgactgaccctcatggcgtagtagtggtttatattggaaaatctgttgatgtgagaaaaatactccaaagttatagcaaagatggaggtc |
216 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34826700 |
tacaagcttgcgaccgaccctcatggcgtagtagtggtttatattggaaaatctgttgatgtgagaaaaatactccaaagttatagcaaagatggaggtc |
34826601 |
T |
|
| Q |
217 |
atttgggtgatg |
228 |
Q |
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|||||||||||| |
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| T |
34826600 |
atttgggtgatg |
34826589 |
T |
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