View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17991_low_66 (Length: 236)

Name: NF17991_low_66
Description: NF17991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17991_low_66
NF17991_low_66
[»] chr3 (41 HSPs)
chr3 (1-217)||(23329713-23329926)
chr3 (133-215)||(34025640-34025722)
chr3 (80-217)||(44107122-44107266)
chr3 (134-217)||(2487453-2487536)
chr3 (133-215)||(29284016-29284098)
chr3 (133-215)||(7470103-7470185)
chr3 (133-215)||(44252422-44252504)
chr3 (134-215)||(34154098-34154179)
chr3 (133-186)||(49025363-49025416)
chr3 (80-215)||(39728303-39728445)
chr3 (134-217)||(40796483-40796565)
chr3 (133-184)||(42758081-42758132)
chr3 (135-217)||(1772739-1772821)
chr3 (133-215)||(17146475-17146557)
chr3 (133-215)||(31127120-31127202)
chr3 (133-215)||(44179008-44179090)
chr3 (133-194)||(44638956-44639017)
chr3 (135-215)||(53631584-53631664)
chr3 (134-185)||(20716131-20716182)
chr3 (133-184)||(55439035-55439086)
chr3 (133-215)||(4557630-4557712)
chr3 (133-215)||(23154332-23154414)
chr3 (133-215)||(49579745-49579827)
chr3 (133-211)||(52572295-52572373)
chr3 (133-186)||(6738726-6738779)
chr3 (134-186)||(10043601-10043653)
chr3 (133-185)||(23547333-23547385)
chr3 (88-215)||(29841942-29842070)
chr3 (133-215)||(23580508-23580590)
chr3 (133-215)||(54316824-54316906)
chr3 (133-186)||(39655617-39655670)
chr3 (133-185)||(16841617-16841669)
chr3 (135-189)||(4016384-4016438)
chr3 (133-215)||(22536169-22536251)
chr3 (135-189)||(48306887-48306941)
chr3 (133-211)||(52197833-52197911)
chr3 (80-125)||(7019606-7019651)
chr3 (80-120)||(20086636-20086676)
chr3 (80-120)||(34154037-34154077)
chr3 (80-120)||(44162405-44162445)
chr3 (134-186)||(44953789-44953841)
[»] chr4 (54 HSPs)
chr4 (133-213)||(45064943-45065023)
chr4 (80-215)||(15987555-15987697)
chr4 (133-215)||(6382600-6382682)
chr4 (133-215)||(31918886-31918968)
chr4 (134-217)||(11172633-11172716)
chr4 (133-215)||(48459173-48459255)
chr4 (133-215)||(6482351-6482433)
chr4 (133-215)||(7608657-7608739)
chr4 (133-215)||(26564518-26564600)
chr4 (80-194)||(44887533-44887654)
chr4 (136-189)||(47550705-47550758)
chr4 (138-215)||(53906602-53906679)
chr4 (134-217)||(30266677-30266760)
chr4 (134-217)||(30285428-30285511)
chr4 (134-217)||(31416259-31416342)
chr4 (80-185)||(39374969-39375080)
chr4 (133-212)||(43892198-43892277)
chr4 (133-215)||(5902940-5903022)
chr4 (136-218)||(41915311-41915393)
chr4 (133-215)||(55826949-55827031)
chr4 (133-194)||(4766662-4766723)
chr4 (133-186)||(16217023-16217076)
chr4 (133-194)||(47239732-47239793)
chr4 (135-211)||(10286957-10287033)
chr4 (135-215)||(39046646-39046726)
chr4 (134-217)||(568082-568165)
chr4 (134-217)||(10574773-10574856)
chr4 (80-215)||(11027699-11027841)
chr4 (135-217)||(1866933-1867015)
chr4 (133-215)||(11123193-11123275)
chr4 (135-217)||(15733865-15733947)
chr4 (133-215)||(44317231-44317313)
chr4 (136-217)||(14606254-14606335)
chr4 (164-217)||(30672667-30672720)
chr4 (133-185)||(36918752-36918804)
chr4 (133-189)||(42299513-42299569)
chr4 (134-217)||(9229970-9230053)
chr4 (137-184)||(12825816-12825863)
chr4 (133-194)||(1724657-1724718)
chr4 (135-216)||(4280944-4281025)
chr4 (135-187)||(3513826-3513878)
chr4 (136-184)||(37348813-37348861)
chr4 (80-215)||(42774388-42774529)
chr4 (127-215)||(42907489-42907577)
chr4 (134-186)||(47103404-47103456)
chr4 (133-184)||(19534142-19534193)
chr4 (134-217)||(21544244-21544327)
chr4 (157-215)||(13015726-13015784)
chr4 (168-218)||(29527508-29527558)
chr4 (134-216)||(31782282-31782364)
chr4 (152-189)||(12076040-12076077)
chr4 (133-194)||(32596527-32596588)
chr4 (134-215)||(50684178-50684258)
chr4 (134-194)||(53910186-53910246)
[»] chr5 (44 HSPs)
chr5 (134-217)||(23045337-23045420)
chr5 (134-217)||(12712850-12712933)
chr5 (78-194)||(3565066-3565188)
chr5 (133-215)||(12834902-12834984)
chr5 (133-217)||(12915131-12915215)
chr5 (135-215)||(13402329-13402409)
chr5 (134-217)||(12774114-12774197)
chr5 (133-215)||(5909008-5909090)
chr5 (134-218)||(10833855-10833939)
chr5 (133-189)||(12866904-12866960)
chr5 (80-215)||(15889832-15889974)
chr5 (135-215)||(20973811-20973891)
chr5 (80-215)||(40517428-40517570)
chr5 (129-215)||(4920509-4920595)
chr5 (127-217)||(20633834-20633924)
chr5 (127-217)||(20649948-20650038)
chr5 (83-215)||(22695227-22695366)
chr5 (80-215)||(10126728-10126871)
chr5 (133-217)||(34258910-34258994)
chr5 (134-217)||(2680878-2680960)
chr5 (80-215)||(6369315-6369456)
chr5 (134-215)||(12235865-12235951)
chr5 (133-215)||(17853606-17853687)
chr5 (133-186)||(6093460-6093513)
chr5 (152-217)||(12250649-12250714)
chr5 (133-186)||(35311498-35311551)
chr5 (133-189)||(1218468-1218524)
chr5 (135-183)||(6156268-6156316)
chr5 (133-189)||(36579603-36579659)
chr5 (135-194)||(27088698-27088757)
chr5 (136-215)||(42987803-42987882)
chr5 (80-125)||(24207261-24207306)
chr5 (135-184)||(38006827-38006876)
chr5 (80-210)||(10822869-10823005)
chr5 (133-185)||(28045333-28045385)
chr5 (136-212)||(28569461-28569537)
chr5 (135-186)||(2984832-2984883)
chr5 (152-215)||(33862508-33862571)
chr5 (134-184)||(12447064-12447114)
chr5 (135-184)||(2413075-2413124)
chr5 (157-194)||(18116869-18116906)
chr5 (133-214)||(30115176-30115257)
chr5 (134-186)||(16366826-16366878)
chr5 (133-217)||(18206709-18206793)
[»] chr6 (29 HSPs)
chr6 (133-215)||(32052737-32052819)
chr6 (134-218)||(29200224-29200308)
chr6 (133-215)||(5863697-5863779)
chr6 (129-215)||(32853521-32853607)
chr6 (80-215)||(3484248-3484390)
chr6 (80-194)||(20611256-20611371)
chr6 (80-189)||(9442270-9442386)
chr6 (80-215)||(2366947-2367089)
chr6 (80-215)||(10188399-10188541)
chr6 (134-189)||(9458380-9458435)
chr6 (133-184)||(14505780-14505831)
chr6 (80-189)||(12141018-12141134)
chr6 (133-215)||(24225381-24225463)
chr6 (133-215)||(27534376-27534458)
chr6 (75-215)||(10142842-10142989)
chr6 (133-184)||(30815932-30815983)
chr6 (133-194)||(3245032-3245093)
chr6 (78-122)||(33061976-33062020)
chr6 (137-215)||(9402228-9402306)
chr6 (135-216)||(11762129-11762210)
chr6 (133-186)||(34179424-34179476)
chr6 (129-189)||(12309258-12309318)
chr6 (135-187)||(14032315-14032367)
chr6 (141-189)||(14321500-14321548)
chr6 (135-186)||(1948205-1948256)
chr6 (147-218)||(9457998-9458069)
chr6 (133-215)||(14254641-14254723)
chr6 (141-217)||(18908560-18908636)
chr6 (167-215)||(32959585-32959633)
[»] chr2 (37 HSPs)
chr2 (81-194)||(13705708-13705822)
chr2 (80-215)||(8916261-8916396)
chr2 (80-215)||(10208755-10208897)
chr2 (135-216)||(18485322-18485403)
chr2 (135-215)||(9632081-9632161)
chr2 (134-217)||(44057536-44057619)
chr2 (133-215)||(37999166-37999248)
chr2 (133-217)||(3546822-3546906)
chr2 (80-186)||(10920284-10920397)
chr2 (133-215)||(37473055-37473137)
chr2 (80-184)||(6164866-6164971)
chr2 (129-186)||(31942509-31942566)
chr2 (127-215)||(24414457-24414545)
chr2 (134-217)||(26755416-26755499)
chr2 (133-215)||(7314975-7315057)
chr2 (133-215)||(30846626-30846708)
chr2 (133-215)||(36128433-36128515)
chr2 (157-216)||(4427610-4427669)
chr2 (136-215)||(18106404-18106483)
chr2 (133-215)||(13830417-13830499)
chr2 (133-215)||(45256505-45256587)
chr2 (133-194)||(10212120-10212181)
chr2 (127-184)||(15546369-15546426)
chr2 (127-180)||(22900462-22900515)
chr2 (134-178)||(42576259-42576303)
chr2 (134-217)||(38342868-38342951)
chr2 (133-215)||(37106387-37106469)
chr2 (133-186)||(11009090-11009143)
chr2 (133-194)||(35336298-35336359)
chr2 (133-189)||(13954367-13954423)
chr2 (133-189)||(14095574-14095630)
chr2 (133-217)||(24051960-24052043)
chr2 (133-217)||(25210004-25210088)
chr2 (137-189)||(35248792-35248844)
chr2 (152-215)||(16105324-16105387)
chr2 (134-189)||(43371254-43371309)
chr2 (135-215)||(6028214-6028294)
[»] chr7 (59 HSPs)
chr7 (80-215)||(30650256-30650398)
chr7 (133-217)||(37103476-37103560)
chr7 (133-216)||(27062608-27062691)
chr7 (133-215)||(18125553-18125635)
chr7 (80-215)||(16865795-16865937)
chr7 (80-215)||(38140115-38140257)
chr7 (80-215)||(45886090-45886232)
chr7 (80-215)||(38152526-38152668)
chr7 (134-217)||(42908374-42908457)
chr7 (133-189)||(17851551-17851607)
chr7 (133-217)||(43217946-43218030)
chr7 (133-217)||(46127486-46127570)
chr7 (129-184)||(5376768-5376823)
chr7 (134-209)||(18683639-18683714)
chr7 (159-214)||(26072563-26072618)
chr7 (159-214)||(26096350-26096405)
chr7 (134-217)||(30839479-30839562)
chr7 (133-215)||(2632294-2632375)
chr7 (80-186)||(5567495-5567608)
chr7 (133-215)||(17884918-17885000)
chr7 (133-215)||(25980249-25980331)
chr7 (133-215)||(35074154-35074236)
chr7 (129-215)||(37578945-37579031)
chr7 (133-194)||(3227887-3227948)
chr7 (134-215)||(23533989-23534070)
chr7 (136-189)||(37196339-37196392)
chr7 (136-189)||(41741800-41741853)
chr7 (134-194)||(22962266-22962326)
chr7 (138-217)||(31425671-31425750)
chr7 (136-194)||(7779696-7779754)
chr7 (133-215)||(10072174-10072256)
chr7 (133-215)||(27850649-27850730)
chr7 (133-215)||(41103329-41103411)
chr7 (133-215)||(44734684-44734766)
chr7 (142-215)||(17885141-17885214)
chr7 (133-186)||(24752719-24752772)
chr7 (157-217)||(29015305-29015365)
chr7 (133-184)||(18826226-18826277)
chr7 (75-217)||(3920159-3920308)
chr7 (133-215)||(21702365-21702447)
chr7 (171-217)||(21750497-21750543)
chr7 (133-215)||(23328296-23328378)
chr7 (133-215)||(25905314-25905396)
chr7 (80-180)||(10996207-10996314)
chr7 (135-216)||(44845513-44845594)
chr7 (125-189)||(32545852-32545916)
chr7 (135-215)||(39456304-39456384)
chr7 (133-209)||(44794357-44794433)
chr7 (133-212)||(25783229-25783308)
chr7 (80-186)||(39316620-39316732)
chr7 (133-180)||(42005587-42005634)
chr7 (147-194)||(45379829-45379876)
chr7 (158-200)||(31393769-31393811)
chr7 (128-194)||(33840755-33840821)
chr7 (129-215)||(45709177-45709263)
chr7 (160-209)||(5432367-5432416)
chr7 (80-155)||(26068841-26068917)
chr7 (80-155)||(26093286-26093362)
chr7 (133-185)||(27062812-27062864)
[»] scaffold0015 (1 HSPs)
scaffold0015 (134-217)||(56242-56325)
[»] chr8 (37 HSPs)
chr8 (133-215)||(40248667-40248749)
chr8 (133-213)||(17220398-17220478)
chr8 (134-217)||(2183968-2184051)
chr8 (134-189)||(4594517-4594572)
chr8 (134-217)||(15068931-15069014)
chr8 (133-215)||(1063190-1063272)
chr8 (75-215)||(34301479-34301626)
chr8 (80-215)||(11255330-11255472)
chr8 (134-217)||(15174196-15174279)
chr8 (133-211)||(2076165-2076243)
chr8 (133-215)||(24870348-24870430)
chr8 (133-215)||(24927630-24927712)
chr8 (80-194)||(27058676-27058797)
chr8 (133-211)||(34776143-34776221)
chr8 (80-180)||(9642727-9642834)
chr8 (134-194)||(2190228-2190288)
chr8 (129-194)||(34021153-34021218)
chr8 (133-217)||(6388888-6388972)
chr8 (135-215)||(28977439-28977519)
chr8 (80-186)||(27932056-27932169)
chr8 (133-215)||(32302741-32302823)
chr8 (133-215)||(39445887-39445969)
chr8 (134-208)||(40789248-40789321)
chr8 (133-194)||(5858803-5858864)
chr8 (133-215)||(29109143-29109225)
chr8 (133-189)||(36132266-36132322)
chr8 (158-217)||(8030822-8030881)
chr8 (133-184)||(14186025-14186076)
chr8 (133-184)||(17468937-17468988)
chr8 (145-184)||(24568632-24568671)
chr8 (133-215)||(4231044-4231126)
chr8 (157-215)||(9476393-9476451)
chr8 (138-212)||(10297140-10297214)
chr8 (133-211)||(34139127-34139204)
chr8 (137-186)||(30481770-30481819)
chr8 (133-186)||(45235751-45235804)
chr8 (141-217)||(5699982-5700058)
[»] chr1 (44 HSPs)
chr1 (80-215)||(29936038-29936180)
chr1 (80-186)||(18354425-18354538)
chr1 (133-215)||(20774313-20774395)
chr1 (80-215)||(13390076-13390218)
chr1 (135-215)||(32594579-32594659)
chr1 (80-215)||(40087783-40087925)
chr1 (80-194)||(34673605-34673726)
chr1 (134-215)||(19572820-19572901)
chr1 (133-186)||(42439989-42440042)
chr1 (133-194)||(51421576-51421637)
chr1 (133-189)||(5180732-5180788)
chr1 (133-217)||(16237649-16237733)
chr1 (80-215)||(17092285-17092427)
chr1 (145-217)||(17516093-17516165)
chr1 (80-215)||(34610695-34610837)
chr1 (134-217)||(12719104-12719187)
chr1 (136-215)||(36187547-36187626)
chr1 (136-194)||(3628321-3628379)
chr1 (133-215)||(23493650-23493732)
chr1 (133-215)||(50426980-50427061)
chr1 (80-200)||(16433501-16433628)
chr1 (133-217)||(44792686-44792771)
chr1 (135-217)||(10450406-10450488)
chr1 (133-215)||(24710539-24710621)
chr1 (133-215)||(28297614-28297696)
chr1 (80-189)||(33293899-33294011)
chr1 (80-189)||(45866537-45866653)
chr1 (133-194)||(49742267-49742328)
chr1 (133-189)||(24237112-24237168)
chr1 (134-194)||(35077550-35077610)
chr1 (135-194)||(13020370-13020429)
chr1 (83-186)||(45460403-45460506)
chr1 (133-211)||(17134628-17134706)
chr1 (135-185)||(18328981-18329031)
chr1 (133-215)||(38686334-38686416)
chr1 (80-217)||(48024591-48024727)
chr1 (80-215)||(23966479-23966621)
chr1 (133-217)||(44615799-44615883)
chr1 (80-194)||(19892573-19892693)
chr1 (152-215)||(34060345-34060408)
chr1 (80-194)||(2514277-2514398)
chr1 (145-215)||(16903197-16903267)
chr1 (80-120)||(34060441-34060481)
chr1 (133-189)||(39615983-39616039)
[»] scaffold0519 (1 HSPs)
scaffold0519 (80-215)||(9923-10065)
[»] scaffold0097 (1 HSPs)
scaffold0097 (129-215)||(33261-33346)
[»] scaffold0036 (1 HSPs)
scaffold0036 (133-215)||(33076-33158)
[»] scaffold0022 (2 HSPs)
scaffold0022 (133-215)||(90278-90360)
scaffold0022 (128-186)||(4227-4285)
[»] scaffold0008 (2 HSPs)
scaffold0008 (134-214)||(67408-67488)
scaffold0008 (134-214)||(75251-75331)
[»] scaffold0095 (1 HSPs)
scaffold0095 (133-215)||(32849-32931)
[»] scaffold0005 (1 HSPs)
scaffold0005 (136-217)||(211043-211124)
[»] scaffold1630 (1 HSPs)
scaffold1630 (133-189)||(1304-1360)
[»] scaffold0135 (1 HSPs)
scaffold0135 (134-217)||(35836-35919)
[»] scaffold0198 (2 HSPs)
scaffold0198 (141-187)||(3689-3735)
scaffold0198 (127-215)||(21067-21155)
[»] scaffold0189 (1 HSPs)
scaffold0189 (152-214)||(3958-4020)
[»] scaffold0294 (1 HSPs)
scaffold0294 (133-184)||(14458-14509)
[»] scaffold0014 (1 HSPs)
scaffold0014 (133-184)||(14500-14551)
[»] scaffold0013 (1 HSPs)
scaffold0013 (80-217)||(128436-128574)
[»] scaffold1322 (1 HSPs)
scaffold1322 (141-189)||(740-788)


Alignment Details
Target: chr3 (Bit Score: 161; Significance: 5e-86; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 23329713 - 23329926
Alignment:
Q  1 tgcattagtgcagtaatgtagtgcatagctgttataatgtaactttagattagcacaaatttgttactagttagaagtgggcatgacaatggggcggggt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    |||||||||||||||||||| |||||    
T  23329713 tgcattagtgcagtaatgtagtgcatagctgttataatgtaactttagattagcacaagtttgttactag----aagtgggcatgacaatggggtggggt 23329808  T
Q  101 agggatgagttttaccttcctcatctc-tattatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctc 199  Q
    |||||||||||||  |||||||||| | || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23329809 agggatgagttttgtcttcctcatcccctactctcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttccc 23329908  T
Q  200 caatgggttcgggtattc 217  Q
    ||||||||||||||||||    
T  23329909 caatgggttcgggtattc 23329926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 34025640 - 34025722
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||| || || | ||||||||||||    
T  34025640 tcatatacttacccgttaccctattcatatccaacggggatgagaaattgaatctcagccccgtccccgacgggttcgggtat 34025722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 217
Target Start/End: Complemental strand, 44107266 - 44107122
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcc------tcat-ctctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||| ||||||| |||| ||||||||||||||      |||| | | ||| |||||||||||||||||| |||| ||||| ||||||||||    
T  44107266 ggcatggcaatggagcggggtggggacgagttttaccttccccgtcctcatacccgattctcatatacttacccgttaccctacccatacccaacgggga 44107167  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||||||| |||| || || | ||||||||||||||    
T  44107166 tgagaaattgaatctcatccccgtccccgacgggttcgggtattc 44107122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 2487453 - 2487536
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||||| |||| | || ||||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||    
T  2487453 catatacttacctgttaccttacccatatccaacggggatgagaaattgaatttcatccccatccccaatgggttcgggtattc 2487536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 29284016 - 29284098
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||| || |||| || || | ||||||||||||    
T  29284016 tcatatacttacccgttaccctatccatacccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgggtat 29284098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 7470185 - 7470103
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| |||| || || | ||||| ||||||    
T  7470185 tcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccgacgggtttgggtat 7470103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 44252422 - 44252504
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||||||||| || |||| || || | ||||||||||||    
T  44252422 tcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgggtat 44252504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 34154098 - 34154179
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| ||||| || |||||||||||||||||||||||| |||| || || | ||||||||||||    
T  34154098 catatacttacccgttaccctacccataccccacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 34154179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 49025363 - 49025416
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  49025363 tcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatc 49025416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 39728303 - 39728445
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| |||||||||||||| | || | ||       | ||||||||||||| |||| |||| ||||| ||||||||||    
T  39728303 ggcatggcaatggggcggggtggggacgagttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacccatacccaacgggga 39728402  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || || | ||||| ||||||    
T  39728403 tgagaaattgaatctcatccccatccccgacgggtttgggtat 39728445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 40796565 - 40796483
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||| ||||| |||| |||||  |||||||||||||||||||||||||| |||| || ||||| |||||||||||||    
T  40796565 catatacttactcgtta-cctacccatactcaacggggatgagaaattgaatctcatccccgtccccaataggttcgggtattc 40796483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 42758081 - 42758132
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  42758081 tcatatacttacccgttaccctacccatatccaacggggatgagaaattgaa 42758132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 1772821 - 1772739
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||||||||| ||||  |||| ||||||||||||||||||||||||| | || | || ||||||| |||||||||||    
T  1772821 atatacttacccgttaccctacgcatacccaacggggatgagaaattgaatcttatcctcgtccccaatggattcgggtattc 1772739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 17146557 - 17146475
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| |||||  |||||| ||||| ||||||||||||| |||| || || ||||||||||||||    
T  17146557 tcatatacttacccgttaccctacccatactcaacggagatgacaaattgaatctcatccccgtccccgatgggttcgggtat 17146475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 31127202 - 31127120
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||||||| | || |||| || || | ||||||||||||    
T  31127202 tcatatacttacccgttaccctacccatatccaacgggaatgagaaattgaaccccatccccgtccccgacgggttcgggtat 31127120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 44179008 - 44179090
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||| |||| || || |  |||||||||||    
T  44179008 tcatatacttacccgttaccctacccatacccaacgtggatgagaaattgaatctcatccccgtccccgacaggttcgggtat 44179090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 44638956 - 44639017
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    |||||||||||||||||| |||| ||||| |||||||| |||||||||||||||||| ||||    
T  44638956 tcatatacttacccgttaccctacccatacccaacgggaatgagaaattgaatctcatcccc 44639017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 53631584 - 53631664
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||| |||||||| ||| ||||| ||| ||||||||||||||||| |||| |||| || |||| ||||||||||||    
T  53631584 atatacttatccgttatcatatacatattcaatggggatgagaaattgaacctcatccccgtcaccaacgggttcgggtat 53631664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 20716131 - 20716182
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaat 185  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  20716131 catatacttacccgttatcctacccatacccaacgaggatgagaaattgaat 20716182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 55439086 - 55439035
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    |||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  55439086 tcatatacttacccgttaccctacccatatccaacggggatgagaagttgaa 55439035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 4557712 - 4557630
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||| |||||||||| |||||||||| || ||||||||||||||||||| |||| |||| || || | ||||| ||||||    
T  4557712 tcatatatttacccgttaccctatccatacccgacggggatgagaaattgaacctcatccccgtccccgacgggtttgggtat 4557630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 23154414 - 23154332
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||| |||||| |||| |||||| |||||||||||||||||| ||||||| || | || || | ||||||||||||    
T  23154414 tcatatacttatccgttaccctacccatattcaacggggatgagaaattaaatctcatcctcgtccccgacgggttcgggtat 23154332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 49579745 - 49579827
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||| ||||||||||||| ||||  |||||| ||||||||||||||||||||| ||| |||| || || | ||||||||||||    
T  49579745 tcatgtacttacccgttaccctactcatatctaacggggatgagaaattgaatttcatccccgtccccgaagggttcgggtat 49579827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 52572295 - 52572373
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgg 211  Q
    |||||||||||||||||| |||| || || |||||||||||||||||||||||| || |||| || || | ||||||||    
T  52572295 tcatatacttacccgttaccctacccgtacccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgg 52572373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 6738779 - 6738726
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||    
T  6738779 tcatatacttacccattaccctacccatacccaacggggatgagaaattgaatc 6738726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 10043653 - 10043601
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    ||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||    
T  10043653 catatacttacccgttaccctacccatatccaacggtgataagaaattgaatc 10043601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 23547385 - 23547333
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaat 185  Q
    ||||||||||| |||||| |||| ||||| |||||||||||||||||||||||    
T  23547385 tcatatacttatccgttaccctacccatacccaacggggatgagaaattgaat 23547333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 29841942 - 29842070
Alignment:
Q  88 aatggggcggggtagggatgagttttaccttcctcatctct-attatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||| |||||||| ||||  ||||||||||||| ||| ||  ||| ||||||||||| ||||||   ||  |||| |||||| |||||||||||||||||    
T  29841942 aatgtggcggggtggggacaagttttaccttccccatatccgattctcatatacttatccgttactttactcatacccaacgtggatgagaaattgaatc 29842041  T
Q  187 tcacccccttctccaatgggttcgggtat 215  Q
    ||| |||| || || | ||||||||||||    
T  29842042 tcatccccgtccccgacgggttcgggtat 29842070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 23580508 - 23580590
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||| ||||   || | |||| |||||||||||||||||||||| ||| |||| ||||| | ||||||||||||    
T  23580508 tcatatacttacctgttacattacctatattcaacggggatgagaaattgaatttcatccccgtctccgacgggttcgggtat 23580590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 54316824 - 54316906
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||| |||| ||||| |||||||||||| || ||||||||||||||||| | || |||  ||||| | ||||||||||||    
T  54316824 tcatatatttacacgttaccctatccatatcgaatggggatgagaaattgaaccccatccctgtctccgacgggttcgggtat 54316906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 39655670 - 39655617
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||||||||||||| ||| |||| ||||| ||||| ||||||||||||||||||    
T  39655670 tcatatacttacccattaccctacccatacccaacagggatgagaaattgaatc 39655617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 16841669 - 16841617
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaat 185  Q
    ||||||||||||| ||||  | | |||||||||||||||||||||||||||||    
T  16841669 tcatatacttacctgttactccacccatatccaacggggatgagaaattgaat 16841617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 4016438 - 4016384
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    ||||| ||| |||||| |||| ||||||||||| |||||||||||||||| ||||    
T  4016438 atatatttatccgttaccctacccatatccaacagggatgagaaattgaacctca 4016384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 22536251 - 22536169
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||| |||| | |||| ||||  |||| ||||||||||||||||||||||||||| |||| ||  | | ||||||||||||    
T  22536251 tcatatgcttatctgttaccctactcatacccaacggggatgagaaattgaatctcatccccgtcctcgacgggttcgggtat 22536169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 48306941 - 48306887
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    ||||| |||||| ||| ||||  ||||||||||||| ||||||||||||||||||    
T  48306941 atatatttacccattaccctactcatatccaacgggaatgagaaattgaatctca 48306887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 52197833 - 52197911
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgg 211  Q
    ||||||||||||||||||  |||   ||||||||||| ||||||||||| ||||||| |||| || || | ||||||||    
T  52197833 tcatatacttacccgttactctacttatatccaacggagatgagaaattaaatctcatccccgtccccgacgggttcgg 52197911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 7019606 - 7019651
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatc 125  Q
    |||||||||||||||||||||  ||| || ||||||||||||||||    
T  7019606 ggcatgacaatggggcggggtgaggacgaattttaccttcctcatc 7019651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 20086636 - 20086676
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcc 120  Q
    |||||| ||||||||| |||| |||||||||||||||||||    
T  20086636 ggcatggcaatggggctgggtggggatgagttttaccttcc 20086676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 34154037 - 34154077
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcc 120  Q
    ||||||||||||||||||||| |||| | ||||||||||||    
T  34154037 ggcatgacaatggggcggggtggggacgggttttaccttcc 34154077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 44162405 - 44162445
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcc 120  Q
    |||||| |||||||||||||| |||| ||||||||||||||    
T  44162405 ggcatggcaatggggcggggtggggacgagttttaccttcc 44162445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 44953841 - 44953789
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    ||||||||||||||||| | |  | ||| ||||||||||||||||||||||||    
T  44953841 catatacttacccgttaccgtgcctatacccaacggggatgagaaattgaatc 44953789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 45064943 - 45065023
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  || |||||||||||||||    
T  45064943 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcatccctgtccccaatgggttcgggt 45065023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 15987697 - 15987555
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatc-------tctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| |||||||||||||||| ||       || ||| ||||||||||||| |||| |||| ||||||||||||||||    
T  15987697 ggcatggcaatggggcggggtggggacgagttttaccttcctcgtccccatactcgattctcatatacttacctgttaccctacccatatccaacgggga 15987598  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || || | ||||||||||||    
T  15987597 tgagaaattgaatctcatccccgtccccgacgggttcgggtat 15987555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 6382682 - 6382600
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| || |||| ||||||||||||    
T  6382682 tcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatctcatccccgtccccaacgggttcgggtat 6382600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 31918968 - 31918886
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||| || |||| || || ||||||||||||||    
T  31918968 tcatatacttacccgttaccctatccatacccaacggggatgagaaattgaatcccatccccgtccccgatgggttcgggtat 31918886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 11172633 - 11172716
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||||  |||| |||| |||||||||||||||||||||||||||||| || |||| || |||||||||||||||||||    
T  11172633 catatacttacttgttaccctacccatatccaacggggatgagaaattgaatcccatccccgtccccaatgggttcgggtattc 11172716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 48459173 - 48459255
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| ||||  ||||  |||||||||||||||||||||||||| |||| || |||||||||||||||||    
T  48459173 tcatatacttacccgttaccctactcatactcaacggggatgagaaattgaatctcatccccgtccccaatgggttcgggtat 48459255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 6482433 - 6482351
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||  ||| ||||| | | ||||||||||    
T  6482433 tcatatacttacccgttaccctacccatatccaacggggatgagaaattgaacctcatgcccgtctccgacgagttcgggtat 6482351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 7608657 - 7608739
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||||||||| || |||| || || | ||||||||||||    
T  7608657 tcatatacttacctgttaccctacccatatccaacggggatgagaaattgaatcccatccccgtccccgaggggttcgggtat 7608739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 26564518 - 26564600
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||| |||| |||| |||||||||||| |||||||||||||||||||| | || || |||| ||||||||||||    
T  26564518 tcatatacttacctgttaccctacccatatccaacgaggatgagaaattgaatctcatctccgtccccaacgggttcgggtat 26564600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 44887533 - 44887654
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcc------tcat-ctctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| ||||||  |||||||||||      |||| | | ||| ||||||||||||| |||| ||||||||||||||| |||||    
T  44887533 ggcatggcaatggggcggggtggggatggattttaccttccctgtcctcatacccgattctcatatacttacctgttaccctatccatatccaatgggga 44887632  T
Q  173 tgagaaattgaatctcaccccc 194  Q
    ||||||||||||||||| ||||    
T  44887633 tgagaaattgaatctcatcccc 44887654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 47550758 - 47550705
Alignment:
Q  136 tatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  47550758 tatacttacccgttaccctatccatacccaacggggatgagaaattgaatctca 47550705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 53906679 - 53906602
Alignment:
Q  138 tacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||||| || || ||||||| ||||||    
T  53906679 tacttacccgttaccctacccatacccaacggggatgagaaattgaatcccacccccgtccccgatgggtttgggtat 53906602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 30266760 - 30266677
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||||||| ||||  |||||||||| |||||||||||||||||| ||   || || |||||||||||||||||||    
T  30266760 catatacttacccgttaccctactcatatccaacagggatgagaaattgaatcccataaccgtccccaatgggttcgggtattc 30266677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 30285428 - 30285511
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||||||| ||||  |||||||||| |||||||||||||||||| ||   || || |||||||||||||||||||    
T  30285428 catatacttacccgttaccctactcatatccaacagggatgagaaattgaatcccataaccgtccccaatgggttcgggtattc 30285511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 31416342 - 31416259
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||||||| | ||  ||||||| |||||||||||||||||||||||| |||| |  ||||| |||||||||||||    
T  31416342 catatacttacccgttaccttactcatatcctacggggatgagaaattgaatctcatccccgttcccaataggttcgggtattc 31416259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 39374969 - 39375080
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcc-----tcatctct-attatcatatacttacccgttatcctatccatatccaacggggat 173  Q
    |||||||||||| |||||||| |||| | ||||||| ||||     |||| ||| ||| |||||||||||||||||| |||| | |||||||||||||||    
T  39374969 ggcatgacaatgaggcggggtggggacgggttttacattcccgtcttcatatctgattctcatatacttacccgttaccctaccgatatccaacggggat 39375068  T
Q  174 gagaaattgaat 185  Q
    ||||||||||||    
T  39375069 gagaaattgaat 39375080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 212
Target Start/End: Original strand, 43892198 - 43892277
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcggg 212  Q
    |||||||||||||| ||| | || ||||||||||||||||||||||||||||||||| |||| || || | |||||||||    
T  43892198 tcatatacttacccattaccttacccatatccaacggggatgagaaattgaatctcatccccgtccccgacgggttcggg 43892277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 5903022 - 5902940
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |||| || |  | ||||||||||||    
T  5903022 tcatatacttacccgttaccctacccatatccaacgaggatgagaaattgaatcccatccccgtccctgacgggttcgggtat 5902940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 41915393 - 41915311
Alignment:
Q  136 tatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattct 218  Q
    |||||||||| |||| ||||| ||||| ||||||||||||||||||||||| || |||| || ||||| | ||||||||||||    
T  41915393 tatacttacctgttaccctattcatattcaacggggatgagaaattgaatcgcatccccgtccccaatagattcgggtattct 41915311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 55827031 - 55826949
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||| | |||| |||| |||||||||| |||||||||||||||||||||| |||| || || | ||||||||||||    
T  55827031 tcatatacttatctgttaccctacccatatccaatggggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 55826949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 4766723 - 4766662
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    ||||||||||||| |||| |||||||||| ||||||| ||||||||||||||||||| ||||    
T  4766723 tcatatacttacctgttaccctatccatacccaacggagatgagaaattgaatctcatcccc 4766662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 16217076 - 16217023
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  16217076 tcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatc 16217023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 47239793 - 47239732
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    ||||||| ||| |||||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  47239793 tcatatatttatccgttaccctatccatatcaaacggggatgagaaattgaatctcatcccc 47239732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 10286957 - 10287033
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgg 211  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||  ||||||| |||| || || | ||||||||    
T  10286957 atatacttacccgttaccctatccatacccaacggggatgagaaatataatctcatccccgtccccgacgggttcgg 10287033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 39046646 - 39046726
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||||  | |||| || || | ||||||||||||    
T  39046646 atatacttactcgttatcctacctatatccaacggggatgagaaattgaatcgtatccccgtccccgacgggttcgggtat 39046726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 568082 - 568165
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||||||| |||| ||||||  || | ||||||||||||||||| || |||| || |||||| ||||||||||||    
T  568082 catatacttacccgttaccctacccatatttaatgaggatgagaaattgaatcccatccccgtccccaatgagttcgggtattc 568165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 10574856 - 10574773
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||||||| || | ||||| |||||||| ||||||||||||||| || | || || ||||||| |||||||||||    
T  10574856 catatacttacccgttaccccacccatacccaacgggaatgagaaattgaatcacatctccgtccccaatggattcgggtattc 10574773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 11027699 - 11027841
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcc------tcatctct-attatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| | ||||||||||||      ||||  || ||| |||||||||||| ||||| |||| ||||| || |||||||    
T  11027699 ggcatggcaatggggcggggtggggacgggttttaccttccccgtcctcatacctgattctcatatacttactcgttaccctacccataccctacgggga 11027798  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || || |  |||||||||||    
T  11027799 tgagaaattgaatctcatccccgtccccgacaggttcgggtat 11027841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 1867015 - 1866933
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||| | ||| |||  ||||||| ||||||||||| ||||||||||||| |||| |||||| ||||||||| |||||    
T  1867015 atatacttactcattaccctgcccatatctaacggggatgaaaaattgaatctcatccccgtctccattgggttcggatattc 1866933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 11123275 - 11123193
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||| |||| |||| ||||||||||||| ||||| |||||||||| || |||| || || | ||||||||||||    
T  11123275 tcatatacttacctgttaccctacccatatccaacggagatgataaattgaatcacatccccgtccccgacgggttcgggtat 11123193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 15733947 - 15733865
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||| ||||||  |||  |||||| || ||||||||||||||||  |||| |||| ||||||||||||||||||||||    
T  15733947 atatacttatccgttactctactcatatctaatggggatgagaaattgagactcatccccgtctccaatgggttcgggtattc 15733865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 44317231 - 44317313
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||| |||| |||| |||||  ||||||||||||||||||||||| || |||| || || | ||||||||||||    
T  44317231 tcatatacttacctgttaccctacccatactcaacggggatgagaaattgaatcccatccccatccccgacgggttcgggtat 44317313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 14606335 - 14606254
Alignment:
Q  136 tatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||| |||| |||| | ||| ||||||||||||||||||||||||||| |||| || ||| |||| | ||||||||    
T  14606335 tatacttacctgttaccctacctatacccaacggggatgagaaattgaatctcatccccgtccccattgggattgggtattc 14606254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 30672667 - 30672720
Alignment:
Q  164 caacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||||||||||||||||||| |||| || ||||||||||| |||||||    
T  30672667 caacggggatgagaaattgaatctcatccccgtccccaatgggttcaggtattc 30672720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 36918752 - 36918804
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaat 185  Q
    ||||||||||||| |||| ||| |||||||||| |||||||||||||||||||    
T  36918752 tcatatacttacctgttaccctgtccatatccagcggggatgagaaattgaat 36918804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 42299513 - 42299569
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||    
T  42299513 tcatatacttactcgttaccctacccataccaaacggggatgagaaattgaatctca 42299569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 9229970 - 9230053
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||| ||||||| ||||  ||||||||||||||||||||||||||| | || |||| |  || | ||||||||||||||    
T  9229970 catatacttgcccgttaccctactcatatccaacggggatgagaaattgaaccacatccccgttcccgacgggttcgggtattc 9230053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 12825863 - 12825816
Alignment:
Q  137 atacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||    
T  12825863 atacttacccgttatcctactcatatcgaacggggatgagaaattgaa 12825816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 1724718 - 1724657
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    ||||||| ||| |||||| |||| ||||| |||||||||||||||||||||| |||| ||||    
T  1724718 tcatatatttatccgttaccctacccatacccaacggggatgagaaattgaacctcatcccc 1724657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 4281025 - 4280944
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtatt 216  Q
    ||||||||||  |||| ||||  |||||||||||||||||||||||||| | | ||||||||| |  ||||||| |||||||    
T  4281025 atatacttacatgttaccctactcatatccaacggggatgagaaattgactataacccccttcccatatgggtttgggtatt 4280944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 3513826 - 3513878
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatct 187  Q
    ||||||||| ||||||||||||||||||| ||  ||||||| |||||||||||    
T  3513826 atatacttatccgttatcctatccatatctaatagggatgaaaaattgaatct 3513878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 37348813 - 37348861
Alignment:
Q  136 tatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    |||||||||| |||| |||| ||||| ||||||||||||||||||||||    
T  37348813 tatacttacctgttaccctacccatacccaacggggatgagaaattgaa 37348861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 42774388 - 42774529
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| ||||||||||||||||||| | |||||||||||| | || | ||       | |||||||||||   ||||||||| ||||| |||| |||||    
T  42774388 ggcatggcaatggggcggggtagggacgggttttaccttccacgtccccatatccaattctcatatacttatatgttatcctacccatacccaatgggga 42774487  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||| ||||||| |||| || || | ||||||||||||    
T  42774488 tgagaaattcaatctcatccccgtc-ccgacgggttcgggtat 42774529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 42907489 - 42907577
Alignment:
Q  127 ctattatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||| |||||||||||||||||| ||||  ||||  || |||||||||||||| |||||||| |||| || |  | ||||||||||||    
T  42907489 ctattctcatatacttacccgttaccctactcataatcagcggggatgagaaatcgaatctcatccccatcccagacgggttcgggtat 42907577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 47103404 - 47103456
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||||| ||| |||||| |||| |||||||||||| |||||||||||||||||    
T  47103404 catatatttatccgttaccctacccatatccaacgaggatgagaaattgaatc 47103456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 19534142 - 19534193
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    |||||||||||| | ||| |||| |||||||||||||||||| |||||||||    
T  19534142 tcatatacttactcattaccctacccatatccaacggggatgcgaaattgaa 19534193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 21544244 - 21544327
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||| | |||| | || ||||| ||||||||||||||||||||||||| | | || || |||||  ||||||||||||    
T  21544244 catatacttagctgttaccttacccatacccaacggggatgagaaattgaatctaatctccgtccccaataagttcgggtattc 21544327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 13015784 - 13015726
Alignment:
Q  157 ccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||| |||| |||||||||||||||| ||| |||| || |||| ||||||||||||    
T  13015784 ccatatctaacgaggatgagaaattgaatttcatccccgtccccaacgggttcgggtat 13015726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 29527508 - 29527558
Alignment:
Q  168 ggggatgagaaattgaatctcacccccttctccaatgggttcgggtattct 218  Q
    |||||||||||||||||||||| |||| ||||||| |||||| | ||||||    
T  29527508 ggggatgagaaattgaatctcatccccgtctccaacgggttcagatattct 29527558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 31782282 - 31782364
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtatt 216  Q
    ||||||||||| ||||| ||||   |||||| ||  |||||||||||||||||  | |||| || ||||||||||||||||||    
T  31782282 catatacttactcgttaccctacatatatccgacaaggatgagaaattgaatcctatccccgtccccaatgggttcgggtatt 31782364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 12076077 - 12076040
Alignment:
Q  152 cctatccatatccaacggggatgagaaattgaatctca 189  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  12076077 cctatctatacccaacggggatgagaaattgaatctca 12076040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 32596588 - 32596527
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    ||||||||||||  |||| |||| |||||| |||||||||| ||||||||||| ||| ||||    
T  32596588 tcatatacttacttgttaccctacccatattcaacggggataagaaattgaatttcatcccc 32596527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 50684178 - 50684258
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||| ||| |||| | | |||||||||||||||| |||||||||||| | || ||  ||||||||| ||||||    
T  50684178 catatacttacccattaccctaccta-atccaacggggatgaggaattgaatctcatctccatccgcaatgggtttgggtat 50684258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 53910246 - 53910186
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    ||||| ||||||||||| |||| |||||  || |||||||||||||| |||||||| ||||    
T  53910246 catatgcttacccgttaccctacccatactcagcggggatgagaaatcgaatctcatcccc 53910186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 23045420 - 23045337
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||| || |||| || |||||||||||||||||||    
T  23045420 catatacttacccgttaccctacccatatccaacggggatgagaaattgaatcccatccccgtccccaatgggttcgggtattc 23045337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 12712933 - 12712850
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||||||| |||| |||||||| |||||||| ||||||||||||||| || | || |||||||||||||||||||    
T  12712933 catatacttacccgttaccctacccatatccgacggggataagaaattgaatctcatcctcgtccccaatgggttcgggtattc 12712850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 3565188 - 3565066
Alignment:
Q  78 tgggcatgacaatggggcggggtagggatgagttttaccttcct-----cat-ctctattatcatatacttacccgttatcctatccatatccaacgggg 171  Q
    |||||||| |||||||||||||| |||| | ||||||||||||      ||| | | ||| |||||||||||||||||| |||| |||||||||||||||    
T  3565188 tgggcatggcaatggggcggggtggggacgggttttaccttcccgtccccatacccgattctcatatacttacccgttaccctacccatatccaacgggg 3565089  T
Q  172 atgagaaattgaatctcaccccc 194  Q
    |||||||||||||||||| ||||    
T  3565088 atgagaaattgaatctcatcccc 3565066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 12834984 - 12834902
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||| | || || || ||||||||||||||    
T  12834984 tcatatacttatccgttatcctatccatacccaacgtggatgagaaattgaatctcatctccgtccccgatgggttcgggtat 12834902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 12915131 - 12915215
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||  | | || |  |||||||||||||||||||    
T  12915131 tcatatacttacccgttaccctatccatatccaacggggatgcgaaattgaatcgtatctccattcccaatgggttcgggtattc 12915215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 13402409 - 13402329
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||| |||| | ||| ||||||||||||||||||||||||||| |||| || || ||||||||||||||    
T  13402409 atatacttacccgttaccctacctatacccaacggggatgagaaattgaatctcatccccgtccccgatgggttcgggtat 13402329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 12774197 - 12774114
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||||||| |||| ||||| || |||||||| ||||||||||||||| || | || |||||||||||||||||||    
T  12774197 catatacttacccgttaccctacccatacccgacggggataagaaattgaatctcatcctcgtccccaatgggttcgggtattc 12774114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 5909090 - 5909008
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| || || ||||||||||||||||||||||||||| |||| || || | ||||||||||||    
T  5909090 tcatatacttacccgttaccctacccgtacccaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 5909008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 10833855 - 10833939
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattct 218  Q
    |||||||||||| |||| |||| |||||  ||||| | |||||||||| ||||||| |||| |||||||||||||||||||||||    
T  10833855 catatacttacctgttaccctacccatactcaacgagaatgagaaattaaatctcatccccgtctccaatgggttcgggtattct 10833939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 12866960 - 12866904
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||    
T  12866960 tcatatacttatccgttatcctatccatacccaacgtggatgagaaattgaatctca 12866904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 15889832 - 15889974
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctatta-------tcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| | |||||||||||| |||| | || |       ||||||||||||| |||| |||| ||||| | ||||||||    
T  15889832 ggcatggcaatggggcggggtggggacgggttttaccttccccatccccataaccgattctcatatacttacctgttaccctacccatacctaacgggga 15889931  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || || | ||||||||||||    
T  15889932 tgagaaattgaatctcatccccgtccccgacgggttcgggtat 15889974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 20973891 - 20973811
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| |||| |  || | ||||||||||||    
T  20973891 atatacttacctgttaccctacccatatccaacggggatgagaaattgaatctcatccccgtacccgacgggttcgggtat 20973811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 40517428 - 40517570
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||||| |||||||||||| | || | ||       | ||||||||||||| |||| |||| ||||| ||||||||||    
T  40517428 ggcatggcaatggggcggggtggggatgggttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacccatacccaacgggga 40517527  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || ||   ||||||||||||    
T  40517528 tgagaaattgaatctcatccccgtccccggcgggttcgggtat 40517570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 4920509 - 4920595
Alignment:
Q  129 attatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||||||| |||| ||||| |||||| |||||||||| |||||| || |||| || || | ||||||||||||    
T  4920509 attatcatatacttacccgttaccctacccatacccaacgaggatgagaaaatgaatcccatccccgtccccgacgggttcgggtat 4920595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 20633834 - 20633924
Alignment:
Q  127 ctattatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||| ||||||| ||| || ||||||||||||||| |||| | ||||| ||||||||||||| |||| || || ||||||||||||||||    
T  20633834 ctattttcatatatttatccattatcctatccatattcaactgcgatgaaaaattgaatctcatccccgtccccgatgggttcgggtattc 20633924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 20649948 - 20650038
Alignment:
Q  127 ctattatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||| ||||||| ||| || ||||||||||||||| |||| | ||||| ||||||||||||| |||| || || ||||||||||||||||    
T  20649948 ctattttcatatatttatccattatcctatccatattcaactgcgatgaaaaattgaatctcatccccgtccccgatgggttcgggtattc 20650038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 215
Target Start/End: Complemental strand, 22695366 - 22695227
Alignment:
Q  83 atgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacggggatga 175  Q
    |||||||||||||||||| |||| | |||||||||||| | || ||||       | |||||||||||| ||||| |||| ||||| |||| ||||||||    
T  22695366 atgacaatggggcggggtggggacgggttttaccttccccgtccctatacccaattctcatatacttactcgttaccctacccatacccaatggggatga 22695267  T
Q  176 gaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||| || |||| | ||| | ||||||||||||    
T  22695266 gaaattgaatcccatccccgtttccgacgggttcgggtat 22695227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 10126728 - 10126871
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcc-----tcat-ctctattatcatatacttacccgttatccta--tccatatccaacgggg 171  Q
    ||||||||||||||||||||| |||| ||||||||||| ||     |||| | | ||| ||||||||||||||||||  |||  |  ||||||||| |||    
T  10126728 ggcatgacaatggggcggggtggggacgagttttacctccccgttttcatacccgattctcatatacttacccgttactctacctatatatccaacaggg 10126827  T
Q  172 atgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| | ||||| ||||||    
T  10126828 atgagaaattgaatctcatccccgtctccgacgggtttgggtat 10126871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 34258910 - 34258994
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||  |||| |||| |||||| ||||| |||||||||||| |||| || |||| || |||||||||||||||||||    
T  34258910 tcatatacttacttgttaccctacccatattcaacgaggatgagaaattaaatcacatccccgtccccaatgggttcgggtattc 34258994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 2680878 - 2680960
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||| ||||||||| |||| ||||||||||||| ||||| |||||||||| || || | || |||||||||||||||||||    
T  2680878 catatacctacccgttaccctacccatatccaacggagatga-aaattgaatcacatcctcatccccaatgggttcgggtattc 2680960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 6369315 - 6369456
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttc------ctcat-ctctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    ||||||| ||||||||||||| |||| ||| ||||||||       ||||| ||| ||| |||||||||||||||||| |||| ||||||||||| ||||    
T  6369315 ggcatgataatggggcggggtggggacgagctttaccttttccgttctcatactcgattctcatatacttacccgttaccctacccatatccaac-ggga 6369413  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||| ||||||| |||| |  |  ||||||||||||||    
T  6369414 tgagaaattaaatctcatccccgttcctgatgggttcgggtat 6369456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 12235865 - 12235951
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccct-----tctccaatgggttcgggtat 215  Q
    |||||| |||||||||| |||| |||||||||| |||||||| ||||||||||||| |||||     || |||||||||||||||||    
T  12235865 catatatttacccgttaccctacccatatccaaaggggatgaaaaattgaatctcatcccctccccatccccaatgggttcgggtat 12235951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 17853687 - 17853606
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||| |||| |||| ||||| |||||||| |||||||||||||||||| |||| || || | ||||||||||||    
T  17853687 tcatatacttacctgttaccctacccatacccaacggg-atgagaaattgaatctcatccccgtccccgacgggttcgggtat 17853606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 6093513 - 6093460
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    ||||||||||||  |||| |||| ||||||||||||||||||||||||||||||    
T  6093513 tcatatacttacttgttaccctacccatatccaacggggatgagaaattgaatc 6093460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 12250649 - 12250714
Alignment:
Q  152 cctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||| ||||||||| |||||||||||||||||||| || |||| || ||||||||||| |||||||    
T  12250649 cctacccatatccaccggggatgagaaattgaatcccatccccgtccccaatgggttcaggtattc 12250714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 35311498 - 35311551
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||||||    
T  35311498 tcatatacttacccgttatcctacatatatccaacggggatgaaaaattgaatc 35311551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 1218468 - 1218524
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    |||||||||||||||||| | ||  |||| |||||||||||||||||||||||||||    
T  1218468 tcatatacttacccgttaccttactcatacccaacggggatgagaaattgaatctca 1218524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 6156316 - 6156268
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattga 183  Q
    |||||||||||||||| |||| |||||||||||| ||||||||||||||    
T  6156316 atatacttacccgttaccctacccatatccaacgaggatgagaaattga 6156268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 36579659 - 36579603
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    ||||||||||||  |||| |||| ||||| |||||||||||||||||||||||||||    
T  36579659 tcatatacttacatgttaccctacccatacccaacggggatgagaaattgaatctca 36579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 27088757 - 27088698
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    ||||| |||||||||| |||| |||||||||||||||||| ||||||||| |||| ||||    
T  27088757 atatatttacccgttaccctacccatatccaacggggatgggaaattgaacctcatcccc 27088698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 42987882 - 42987803
Alignment:
Q  136 tatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||  |||  ||||||||||||| |||||||||||||||||| |||| |  || | ||||||||||||    
T  42987882 tatacttacccgttacgctactcatatccaacgggaatgagaaattgaatctcatccccgttcccgacgggttcgggtat 42987803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 24207261 - 24207306
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatc 125  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||    
T  24207261 ggcatggcaatggggcggggtggggatgggttttaccttcctcatc 24207306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 38006876 - 38006827
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    ||||||||| |||||| |||| ||||| ||||||||||||||||||||||    
T  38006876 atatacttatccgttaccctacccatacccaacggggatgagaaattgaa 38006827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 210
Target Start/End: Complemental strand, 10823005 - 10822869
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttacct-----tcctcatctc-tattatcatatacttacccgttatcctatccatatccaacggggat 173  Q
    ||||||||||||||||||||| |||| |  ||||||||     ||| ||| || ||||||||||||||||||||||| | ||  |||| |||||| ||||    
T  10823005 ggcatgacaatggggcggggtggggacggtttttacctccccatccccatatcctattatcatatacttacccgttaccatactcatacccaacgaggat 10822906  T
Q  174 gagaaattgaatctcacccccttctccaatgggttcg 210  Q
    ||||||| ||| | || |||| || ||||| ||||||    
T  10822905 gagaaatcgaaccccatccccgtccccaataggttcg 10822869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 28045333 - 28045385
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaat 185  Q
    ||||||||||||| |||| |||| |||||  ||||||||||||||||||||||    
T  28045333 tcatatacttacctgttaccctacccatactcaacggggatgagaaattgaat 28045385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 28569537 - 28569461
Alignment:
Q  136 tatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcggg 212  Q
    |||||||||  |||| ||||  |||| ||||||| |||||||||||||||| || |||| || ||||||||||||||    
T  28569537 tatacttacatgttaccctactcatacccaacggagatgagaaattgaatcccatccccgtccccaatgggttcggg 28569461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 2984832 - 2984883
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    ||||||||||| |||| ||||  ||||| |||||||||||||||||||||||    
T  2984832 atatacttacctgttaccctactcatattcaacggggatgagaaattgaatc 2984883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 33862571 - 33862508
Alignment:
Q  152 cctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||| |||||| ||||||||||||||||||||| |||| |||| || || | ||||||||||||    
T  33862571 cctacccatattcaacggggatgagaaattgaacctcatccccgtccccgacgggttcgggtat 33862508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 12447064 - 12447114
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    ||||||||||||||||| | || ||||| ||||||||||||||||| ||||    
T  12447064 catatacttacccgttaccttacccatacccaacggggatgagaaaatgaa 12447114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 2413124 - 2413075
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    ||||||||| | |||| |||| |||||||||||||| |||||||||||||    
T  2413124 atatacttatctgttaccctacccatatccaacgggaatgagaaattgaa 2413075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 18116906 - 18116869
Alignment:
Q  157 ccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  18116906 ccatatccaagggggatgagaaattgaatctcatcccc 18116869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 30115176 - 30115257
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggta 214  Q
    ||||||||||||| |||||| || | ||||||||  ||||||| |||||||| | || || | ||||| |||||||||||||    
T  30115176 tcatatacttacctgttatcttacctatatccaatagggatgaaaaattgaaccccatcctcgtctccgatgggttcgggta 30115257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 16366878 - 16366826
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||||||||||||  || |||| ||||||||||||||||| |||||| |||||    
T  16366878 catatacttacccactaccctacccatatccaacggggataagaaatcgaatc 16366826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 18206709 - 18206793
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||| ||||  ||| ||||| ||||||||||||||| || ||| | || |||| || || ||||||| ||||||||    
T  18206709 tcatatacttacctgttactctacccatacccaacggggatgagatatggaaccccatccccatccccgatgggtttgggtattc 18206793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 32052737 - 32052819
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||    
T  32052737 tcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatctcatccccgtctccaacgggttccggtat 32052819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 29200308 - 29200224
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattct 218  Q
    ||||||||||||||||| || | ||||  ||||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  29200308 catatacttacccgttacccaacccatgaccaacggggatgagaaattgaatctcatccccgtccccaatgggttcgggtattct 29200224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 5863779 - 5863697
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| |||| || || | ||||||||||||    
T  5863779 tcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 5863697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 32853521 - 32853607
Alignment:
Q  129 attatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| |||| ||||| ||||||||||||||||||||||||||| |||| || || | ||||||||||||    
T  32853521 attatcatatacttaccagttaccctacccatacccaacggggatgagaaattgaatctcatccccatccccgacgggttcgggtat 32853607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 3484390 - 3484248
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| | |||||||||||| | || ||||       | |||||||||||||||||| |||| ||||| ||||||||||    
T  3484390 ggcatggcaatggggcggggtggggacgggttttaccttccccgtccctatacccgattctcatatacttacccgttaccctacccatacccaacgggga 3484291  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||| || |||| || || | ||||||||||||    
T  3484290 tgagaaattgaatcccatccccgtccccgacgggttcgggtat 3484248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 20611371 - 20611256
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctc-tattatcatatacttacccgttatcctatccatatccaacggggatgagaa 178  Q
    ||||||||||||||||||||| |||| ||||||  |||||| |||| | || |  |||||||||||| |||| | || ||||| ||||||||||||||||    
T  20611371 ggcatgacaatggggcggggtggggacgagtttcgccttccccatcccctactcccatatacttacctgttaccatacccatacccaacggggatgagaa 20611272  T
Q  179 attgaatctcaccccc 194  Q
    ||||||||||| ||||    
T  20611271 attgaatctcatcccc 20611256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 9442270 - 9442386
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||||||||||| |||||| |||| | |||||||||||| | |||| ||       | |||||||||||||||||| | || ||||||||||||||||    
T  9442270 ggcatgacaatgggacggggtggggacgggttttaccttccccgtctccatacccgattctcatatacttacccgttaccttacccatatccaacgggga 9442369  T
Q  173 tgagaaattgaatctca 189  Q
    |||||||||||||||||    
T  9442370 tgagaaattgaatctca 9442386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 2366947 - 2367089
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| | ||||||||||||||||| | ||       | ||||||||||||  |||| ||||  |||| ||||||||||    
T  2366947 ggcatggcaatggggcggggtggggacgggttttaccttcctcatccccatatccgattctcatatacttacatgttaccctactcatacccaacgggga 2367046  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || || | ||||||||||||    
T  2367047 tgagaaattgaatctcatccccgtccccgacgggttcgggtat 2367089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 10188541 - 10188399
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| |||||||||||||| |||| | ||       | ||||||||||||| |||| |||| ||||| ||||||||||    
T  10188541 ggcatggcaatggggcggggtggggacgagttttaccttccccatccccatacccgattctcatatacttacctgttaccctacccatacccaacgggga 10188442  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||| || |||| || || | | ||||||||||    
T  10188441 tgagaaattgaatcccatccccgtccccgacgagttcgggtat 10188399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 9458380 - 9458435
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||    
T  9458380 catatacttacccgttaccctacccatacccaacggggatgagaaattgaatctca 9458435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 14505780 - 14505831
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  14505780 tcatatacttacccgttaccctacccatatccaacggggatgagaaattgaa 14505831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 12141018 - 12141134
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| |||||||||||||| | || | ||       | ||||||||||||||||||  ||| ||||| ||||||||||    
T  12141018 ggcatggcaatggggcggggtggggacgagttttaccttccccgtccccatacccgattctcatatacttacccgttactctacccatacccaacgggga 12141117  T
Q  173 tgagaaattgaatctca 189  Q
    |||||||||||||||||    
T  12141118 tgagaaattgaatctca 12141134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 24225381 - 24225463
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||| ||||| |||| ||||||||||||| |||||||||||||||| || | || ||||| | ||||||||||||    
T  24225381 tcatatacttactcgttaccctacccatatccaacggtgatgagaaattgaatcacatcgccgtctccgacgggttcgggtat 24225463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 27534376 - 27534458
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||| |||||| |||| ||||| |||||||||||||||||||||||| || |||| || || | ||||||||||||    
T  27534376 tcatatacttaaccgttaccctacccatacccaacggggatgagaaattgaatcacatccccgtccccgacgggttcgggtat 27534458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 215
Target Start/End: Complemental strand, 10142989 - 10142842
Alignment:
Q  75 aagtgggcatgacaatggggcggggtagggatgagttttaccttcc------tcatctct-attatcatatacttacccgttatcctatccatatccaac 167  Q
    |||| |||||| |||||||||||| |||||| ||||||||||||||      |||| ||  ||| || ||||||||||||||| |||| |||||  ||||    
T  10142989 aagtaggcatggcaatggggcgggatagggacgagttttaccttccccgttctcatatccgattctcgtatacttacccgttaccctacccatactcaac 10142890  T
Q  168 ggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||||| || || | || || | ||||||||||||    
T  10142889 ggggatgagaaattgaatcccatcctcgtccccgacgggttcgggtat 10142842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 30815932 - 30815983
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  30815932 tcatatacttacccgttaccctatctatatccaacagggatgagaaattgaa 30815983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 3245032 - 3245093
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    ||||||||||||  ||||||||||||||||||||||| |||| ||||| |||||||| ||||    
T  3245032 tcatatacttacttgttatcctatccatatccaacggagatgcgaaatcgaatctcatcccc 3245093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 33061976 - 33062020
Alignment:
Q  78 tgggcatgacaatggggcggggtagggatgagttttaccttcctc 122  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  33061976 tgggcatggcaatggggcggggtagggatgaattttaccttcctc 33062020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 215
Target Start/End: Original strand, 9402228 - 9402306
Alignment:
Q  137 atacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||| |||| ||||||||| ||| |||||||||| |||||||| |||| || ||  ||||||| |||||    
T  9402228 atacttacccgttaccctacccatatccagcggagatgagaaatcgaatctcatccccgtccccgttgggttctggtat 9402306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 11762129 - 11762210
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtatt 216  Q
    ||||||||||| |||| ||||  |||||||||||||| |||||||||||| |||| | || || || | |||||||||||||    
T  11762129 atatacttacctgttaccctactcatatccaacgggggtgagaaattgaacctcatcgccatccccgacgggttcgggtatt 11762210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 34179476 - 34179424
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||||||||||||||||| |||| ||||||||||| ||||||| ||||||||||    
T  34179476 tcatatacttacccgtta-cctacccatatccaacagggatgaaaaattgaatc 34179424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 12309258 - 12309318
Alignment:
Q  129 attatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    ||||||||||| ||| ||||||  ||| |||||  ||||||||||||||||||||||||||    
T  12309258 attatcatatatttatccgttactctacccatactcaacggggatgagaaattgaatctca 12309318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 14032315 - 14032367
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatct 187  Q
    |||||||||||||||| |||| | ||| ||||||||||||| |||||||||||    
T  14032315 atatacttacccgttaccctacctatacccaacggggatgaaaaattgaatct 14032367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 14321500 - 14321548
Alignment:
Q  141 ttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    ||||||||||  ||| |||||| ||||||||||||||||||||||||||    
T  14321500 ttacccgttacgctacccatattcaacggggatgagaaattgaatctca 14321548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 1948256 - 1948205
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||||||||||||||| |||| ||||||||| |||||| ||||||| |||||    
T  1948256 atatacttacccgttaccctacccatatccagcggggacgagaaatcgaatc 1948205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 9457998 - 9458069
Alignment:
Q  147 gttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattct 218  Q
    ||||||||| |||||||||||| |||||| |||| ||||| || |||| ||  ||||||||||| |||||||    
T  9457998 gttatcctacccatatccaacgaggatgacaaatagaatcccatccccgtcctcaatgggttcgagtattct 9458069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 14254641 - 14254723
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||  |||| ||||  |||||| |||  |||||||||||||||||||| |||| || || | ||||||||||||    
T  14254641 tcatatacttacatgttaccctactcatatcgaacatggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 14254723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 18908560 - 18908636
Alignment:
Q  141 ttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||| |||| |||| ||||| | || |||||||||||| ||||||||| |||| ||  ||||||||| ||||||||    
T  18908560 ttacctgttaccctaaccatacctaagggggatgagaaactgaatctcatccccatcctcaatgggtttgggtattc 18908636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 32959585 - 32959633
Alignment:
Q  167 cggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||| |||||||| |||| || |||| ||||||||||||    
T  32959585 cggggatgagaaatcgaatctcatccccgtccccaacgggttcgggtat 32959633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 13705822 - 13705708
Alignment:
Q  81 gcatgacaatggggcggggtagggatgagttttaccttcctcat-ctctattatcatatacttacccgttatcctatccatatccaacggggatgagaaa 179  Q
    ||||| |||||||||||||| |||| |||||||||||| | ||| | | ||| ||||||||||| |||||| |||| |||||||||||||||||||||||    
T  13705822 gcatggcaatggggcggggtggggacgagttttacctttcccatacccgattctcatatacttatccgttaccctacccatatccaacggggatgagaaa 13705723  T
Q  180 ttgaatctcaccccc 194  Q
    |||||||||| ||||    
T  13705722 ttgaatctcatcccc 13705708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 8916396 - 8916261
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctct-attatcatatacttacccgttatcctatccatatccaacggggatgagaa 178  Q
    |||||| |||||||||||||| |||| | ||||||| |||| ||| ||| ||| |||||||||||||||||| |||| ||||| |||||| |||||||||    
T  8916396 ggcatggcaatggggcggggtggggacgggttttacattcc-catatctgattctcatatacttacccgttaccctacccatacccaacgaggatgagaa 8916298  T
Q  179 attgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||| |||| || || | ||||||||||||    
T  8916297 attgaatctcatccccgtccccgacgggttcgggtat 8916261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 10208897 - 10208755
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcc------tcat-ctctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| | ||||||||||||      |||| | | ||| |||||||||||||||||| |||| ||||||||||||||||    
T  10208897 ggcatggcaatggggcggggtggggacgggttttaccttccccgttctcatacccgattctcatatacttacccgttaccctacccatatccaacgggga 10208798  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || || | ||||||||||||    
T  10208797 tgagaaattgaatctcatccccgtccccgacgggttcgggtat 10208755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 18485322 - 18485403
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtatt 216  Q
    ||||||||||| |||| |||| |||||||||||||||||||||||||||||| || |||| || ||||||||||||||||||    
T  18485322 atatacttacctgttaccctacccatatccaacggggatgagaaattgaatcccatccccgtccccaatgggttcgggtatt 18485403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 9632081 - 9632161
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| |||| || |||| ||||||||||||    
T  9632081 atatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccaacgggttcgggtat 9632161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 44057536 - 44057619
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||||||| ||||  ||||||| |||||||||| ||||||||||||| |||| || |||||||||||||||||||    
T  44057536 catatacttacccgttaccctactcatatccgacggggatgaaaaattgaatctcatccccgtccccaatgggttcgggtattc 44057619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 37999166 - 37999248
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||| |||||||||| |||| || |||||||||||||||||||||||||||||| |||| ||||| | ||||||||||||    
T  37999166 tcatataattacccgttaccctacccgtatccaacggggatgagaaattgaatctcatccccgtctccgacgggttcgggtat 37999248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 3546822 - 3546906
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||||||| ||| |||||||||| | ||||||||||||||||||||||||| |||| || ||||||||||  |||||||    
T  3546822 tcatatacttaccccttaccctatccatagctaacggggatgagaaattgaatctcatccccatccccaatgggttatggtattc 3546906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 10920284 - 10920397
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctc-------tattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| | |||||| ||||| ||||||       |||| ||||||||||||| |||| |||| ||||||||||||||||    
T  10920284 ggcatggcaatggggcggggtggggacgggttttatcttccccatctccataccctattctcatatacttacctgttaccctacccatatccaacgggga 10920383  T
Q  173 tgagaaattgaatc 186  Q
    ||||||||||||||    
T  10920384 tgagaaattgaatc 10920397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 37473137 - 37473055
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||| |||| |||| ||||| ||||||||||||||||||||||||||| |||| || || | ||||||||||||    
T  37473137 tcatatacttacctgttaccctacccatacccaacggggatgagaaattgaatctcatccccatccccgacgggttcgggtat 37473055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 6164971 - 6164866
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-tatcatatacttacccgttatcctatccatatccaacggggatgagaa 178  Q
    ||||||||||||||||||||| |||| |||||||  ||||| |||| | |  |  ||||||||||||||| | |||| ||||||||||||||||||||||    
T  6164971 ggcatgacaatggggcggggtggggacgagttttgtcttccccatccccaactcccatatacttacccgtaaccctacccatatccaacggggatgagaa 6164872  T
Q  179 attgaa 184  Q
    ||||||    
T  6164871 attgaa 6164866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 31942566 - 31942509
Alignment:
Q  129 attatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  31942566 attatcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatc 31942509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 24414545 - 24414457
Alignment:
Q  127 ctattatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||| ||||| |||||||||||| |||| ||||| |||||||||||||||||||||||| || |||| || || | ||||||||||||    
T  24414545 ctattctcatacacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgggtat 24414457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 26755416 - 26755499
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||| |||| || |||||   |||||||||||    
T  26755416 catatacttacccattaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccaatcaattcgggtattc 26755499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 7315057 - 7314975
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||  ||||||||| |||||||||||||||||||| || |||| || || | ||||||||||||    
T  7315057 tcatatacttacccgttaccctgcccatatccagcggggatgagaaattgaatcacatccccgtccccgacgggttcgggtat 7314975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 30846626 - 30846708
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||| |||||| |||| ||||| |||||||||||||||||||||||| || |||| || || | ||||||||||||    
T  30846626 tcatatacttagccgttaccctacccatacccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgggtat 30846708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 36128515 - 36128433
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||| |||| || || | |||||| |||||    
T  36128515 tcatatacttacccgttaccctacccatacccaacggggatgaaaaattgaatctcatccccgtccccgacgggttcaggtat 36128433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 4427610 - 4427669
Alignment:
Q  157 ccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtatt 216  Q
    |||||||||| ||||||||||||||||||| || |||| || ||||||||||||||||||    
T  4427610 ccatatccaatggggatgagaaattgaatcacatccccgtccccaatgggttcgggtatt 4427669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 18106483 - 18106404
Alignment:
Q  136 tatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||| |||| |||| |||||||||||||||||||||| || ||||||| |||| ||||| | || |||||||||    
T  18106483 tatacttacctgttaccctacccatatccaacggggatgagaagttaaatctcatccccgtctccgacggattcgggtat 18106404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 13830417 - 13830499
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||  ||| |||| ||||| |||||||||||||||||||||||| || |||| || || | ||||||||||||    
T  13830417 tcatatacttacctattaccctacccatacccaacggggatgagaaattgaatcacatccccgtccccgacgggttcgggtat 13830499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 45256505 - 45256587
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||| ||| |||||| |||| | ||||| ||||||||||||||||||||||||| |||| || || ||||||| ||||||    
T  45256505 tcatatatttatccgttaccctacctatatctaacggggatgagaaattgaatctcatccccgtccccgatgggtttgggtat 45256587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 10212120 - 10212181
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    |||||||||||||||||| |||| ||||| |||||||| || ||||||||||||||| ||||    
T  10212120 tcatatacttacccgttaccctacccatacccaacgggaataagaaattgaatctcatcccc 10212181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 15546369 - 15546426
Alignment:
Q  127 ctattatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    ||||| |||||||||||||||||| |||| | |||||||| |||||||||||||||||    
T  15546369 ctattctcatatacttacccgttaccctacctatatccaatggggatgagaaattgaa 15546426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 22900462 - 22900515
Alignment:
Q  127 ctattatcatatacttacccgttatcctatccatatccaacggggatgagaaat 180  Q
    ||||| |||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  22900462 ctattctcatatacttacccgttaccctacccatacccaacggggatgagaaat 22900515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 42576259 - 42576303
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaa 178  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  42576259 catatacttacccgttaccctacccatatccaacggggatgagaa 42576303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 38342951 - 38342868
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||| ||| |||||| |||| |||||| |||||||||||||||||| ||||||| | || || | ||||||||| |||||||    
T  38342951 catatatttatccgttaccctacccatattcaacggggatgagaaattaaatctcatctccgtccctaatgggttccggtattc 38342868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 37106387 - 37106469
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||| ||| || ||| |||||||||| |||||| |||||||||||||||||||| |||| || |  | ||||||||||||    
T  37106387 tcatatatttatccattagcctatccatacccaacgaggatgagaaattgaatctcatccccgtccctgacgggttcgggtat 37106469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 11009143 - 11009090
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||||||||||| ||||| |||| ||||| ||||| ||||||||||||||||||    
T  11009143 tcatatacttacacgttaccctacccatacccaacagggatgagaaattgaatc 11009090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 35336298 - 35336359
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    ||||||||||||  |||| |||| |||||||||| || ||||||||||||||||||| ||||    
T  35336298 tcatatacttacatgttaccctacccatatccaatggagatgagaaattgaatctcatcccc 35336359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 13954367 - 13954423
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    |||||||||||| |||||||||| ||||| ||| ||||||| |||||| ||||||||    
T  13954367 tcatatacttactcgttatcctacccatacccagcggggataagaaatcgaatctca 13954423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 14095574 - 14095630
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    |||||||||||| |||||||||| ||||| ||| ||||||| |||||| ||||||||    
T  14095574 tcatatacttactcgttatcctacccatacccagcggggataagaaatcgaatctca 14095630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 24052043 - 24051960
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||||||||||| |||| ||||| ||  ||| ||||||||||||||||||| || | || ||||||| |||| ||||||    
T  24052043 tcatatacttacccgttaccctacccataccct-cggagatgagaaattgaatctcatccacgtccccaatggattcgagtattc 24051960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 25210004 - 25210088
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||||||||||| || | ||||| ||| ||||||||||| || ||||  || |||| || |||| ||||||||||||||    
T  25210004 tcatatacttacccgttacccaacccatacccagcggggatgagatatcgaataacatccccgtcaccaacgggttcgggtattc 25210088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 35248844 - 35248792
Alignment:
Q  137 atacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    |||||||||| ||| |||| ||||||||||||||||| |||||| ||||||||    
T  35248844 atacttacccattaccctacccatatccaacggggataagaaatcgaatctca 35248792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 16105324 - 16105387
Alignment:
Q  152 cctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||| |||||| |||||||||||||||||||| |||| |  || | ||||||||||||    
T  16105324 cctatccatacccaacgaggatgagaaattgaatctcatccccgttcccgacgggttcgggtat 16105387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 43371254 - 43371309
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    |||||||||| |||||| ||||  |||||||||| || ||||||||||||||||||    
T  43371254 catatacttatccgttaccctactcatatccaacaggcatgagaaattgaatctca 43371309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 6028294 - 6028214
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||| |||||| |||| |||| | ||||||||| |||||||||||||||| | || |||| || || | ||||||||||||    
T  6028294 atatccttacctgttaccctaccaatatccaacagggatgagaaattgaaccccatccccgtccccgacgggttcgggtat 6028214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 30650256 - 30650398
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||  |||| | |||||||||||| |||||| ||       | |||||||||||||||||| |||| ||||||||||||||||    
T  30650256 ggcatggcaatggggcggggaggggacgggttttaccttccccatctccatacccgattctcatatacttacccgttaccctacccatatccaacgggga 30650355  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || || | ||||||||||||    
T  30650356 tgagaaattgaatctcatccccgtccccgacgggttcgggtat 30650398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 37103560 - 37103476
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  37103560 tcatatatttatccgttatcctacccatatccaatggggatgagaaattgaatctcatctccttccccaatgggttcgggtattc 37103476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 27062691 - 27062608
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtatt 216  Q
    |||||||||||| |||||||||| ||||||||||||||||||| |||| |||||||| |||| || ||||||||||||||||||    
T  27062691 tcatatacttactcgttatcctacccatatccaacggggatgacaaatagaatctcatccccgtccccaatgggttcgggtatt 27062608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 18125635 - 18125553
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||| || || | ||||||||||||    
T  18125635 tcatatacttactcgttatcctatccatatctaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 18125553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 16865795 - 16865937
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||| ||| |||| | ||||||||||||||||| | ||       |||||||||||||||||||| |||| ||||| ||||||||||    
T  16865795 ggcatggcaatggggcgaggtggggacgggttttaccttcctcatccccatacccgattatcatatacttacccgttaccctacccatacccaacgggga 16865894  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||| || |||| || || | ||||||||||||    
T  16865895 tgagaaattgaatcccatccccgtccccgacgggttcgggtat 16865937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 38140257 - 38140115
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| |||||||||||||||| |  | ||       | |||||||||||||||||| |||| ||||| ||||||||||    
T  38140257 ggcatggcaatggggcggggtggggacgagttttaccttcctcgtacccatatccggttctcatatacttacccgttaccctacccataaccaacgggga 38140158  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || || | ||||||||||||    
T  38140157 tgagaaattgaatctcatccccgtccccgacgggttcgggtat 38140115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 45886232 - 45886090
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| | |||| |||||||||||| | |||| ||       | ||||||||||||| |||| |||| ||||||||||||||||    
T  45886232 ggcatggcaatggggcggggtggagatgggttttaccttccccgtctccatacccaattctcatatacttacctgttaccctacccatatccaacgggga 45886133  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || || | ||||||||||||    
T  45886132 tgagaaattgaatctcatccccgtccccgacgggttcgggtat 45886090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 38152526 - 38152668
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcat-------ctctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    ||||||||||||||||||||| |||| | |||||||||||| | |       ||| ||| |||||||||||||||||| |||| |||||  |||||||||    
T  38152526 ggcatgacaatggggcggggtggggacgggttttaccttccccgttcccatactcgattctcatatacttacccgttaccctacccatactcaacgggga 38152625  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||| || |||| || || ||||||| ||||||    
T  38152626 tgagaaattgaatcccatccccgtccccgatgggtttgggtat 38152668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 42908457 - 42908374
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||||||| |||| ||||| |||| ||||||||||||||||||| || |||| || | |||||||||||||||||    
T  42908457 catatacttacccgttaccctacccatacccaaaggggatgagaaattgaatcccatccccgtcccgaatgggttcgggtattc 42908374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 17851551 - 17851607
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||    
T  17851551 tcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctca 17851607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 43217946 - 43218030
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||  |||| |||| ||||||| ||||| ||||||||||||||||||| | || || |||||||||||||||||||    
T  43217946 tcatatacttacttgttaccctacccatatctaacggagatgagaaattgaatctcatctccgtccccaatgggttcgggtattc 43218030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 46127570 - 46127486
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||| |||| |||||||| || ||||||||||||||||||||| |||| |||| || || |||||||| |||||||    
T  46127570 tcatatacttacctgttaccctatccacattcaacggggatgagaaattgaacctcatccccatccccgatgggttcaggtattc 46127486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 5376768 - 5376823
Alignment:
Q  129 attatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  5376768 attatcatatacttacccgttaccctattcatattcaacggggatgagaaattgaa 5376823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 209
Target Start/End: Original strand, 18683639 - 18683714
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttc 209  Q
    |||||||||||| ||||||||| ||||||||||  || |||||||||||||||||| |||| || |||||||||||    
T  18683639 catatacttacctgttatcctacccatatccaaaaggaatgagaaattgaatctcatccccgtccccaatgggttc 18683714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 26072563 - 26072618
Alignment:
Q  159 atatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggta 214  Q
    |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||    
T  26072563 atatccaatggggatgagaaattgaatctcatccccgtctccaatgggttcgggta 26072618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 26096350 - 26096405
Alignment:
Q  159 atatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggta 214  Q
    |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||    
T  26096350 atatccaatggggatgagaaattgaatctcatccccgtctccaatgggttcgggta 26096405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 30839562 - 30839479
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||||  |||| |||| | |||  |||||||||||||||||||||||||| |||| || |||||||||||||||||||    
T  30839562 catatacttacttgttaccctaacaatactcaacggggatgagaaattgaatctcatccccgtccccaatgggttcgggtattc 30839479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 2632375 - 2632294
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||||||| |||| |||| ||||| |  |||||||||||    
T  2632375 tcatatacttacccgttacccta-ccatacccaacggggatgagaaattgaacctcatccccgtctccgacaggttcgggtat 2632294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 5567608 - 5567495
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttacct------tcctcat-ctctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| ||||||||||||||||      ||| ||| | ||||| ||||||||||||| |||| ||||  |||||||||||||||    
T  5567608 ggcatggcaatggggcggggtggggatgagttttacctcccccgtccccataccctattctcatatacttacctgttaccctactcatatccaacgggga 5567509  T
Q  173 tgagaaattgaatc 186  Q
    |||||||| |||||    
T  5567508 tgagaaatagaatc 5567495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 17884918 - 17885000
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||| |||||||||| |||| |||||| |||||||||||||||||||||||||| |||| || || | ||||| ||||||    
T  17884918 tcatatatttacccgttaccctacccatattcaacggggatgagaaattgaatctcatccccgtccccgacgggtttgggtat 17885000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 25980331 - 25980249
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||| | || ||  ||| ||||||||||||    
T  25980331 tcatatacttacccgttaccctacccatacccaacggggataagaaattgaatctcatctccgtcctcaacgggttcgggtat 25980249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 35074154 - 35074236
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||| ||||| || |||| || || | ||||||||||||    
T  35074154 tcatatacttacccgttaccctacccatacccaacggggatgagaaatcgaatcccatccccgtccccgacgggttcgggtat 35074236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 37578945 - 37579031
Alignment:
Q  129 attatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||||||| ||||  |||| |||||||||||||||||||||| | || |||| || || | ||||||||||||    
T  37578945 attatcatatacttacccgttaccctactcatacccaacggggatgagaaattgaaccacatccccatccccgacgggttcgggtat 37579031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 3227948 - 3227887
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    |||| |||||| |||||| |||| ||||||||||||||||||||||||||||||||| ||||    
T  3227948 tcatctacttatccgttaccctacccatatccaacggggatgagaaattgaatctcatcccc 3227887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 23534070 - 23533989
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||| ||||| ||||| |||| ||||||||| |||||||||||||| |||||||| |||| ||||| | ||||||||||||    
T  23534070 catattcttactcgttaccctacccatatccagcggggatgagaaatcgaatctcatccccgtctccgacgggttcgggtat 23533989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 37196392 - 37196339
Alignment:
Q  136 tatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||    
T  37196392 tatacttacccgttaccctacccatacccaacggggatgagaaattgaatctca 37196339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 41741853 - 41741800
Alignment:
Q  136 tatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  41741853 tatatttacccgttatcctacccatatccaacagggatgagaaattgaatctca 41741800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 22962266 - 22962326
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    ||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||| ||||    
T  22962266 catatacttacccgttaccctacccatacccaacggggatgaaaaattgaatctcatcccc 22962326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 31425671 - 31425750
Alignment:
Q  138 tacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||| |||| |||| |||||  |||||||||||||||||||||||||| |||| || ||||| ||||| |||||||    
T  31425671 tacttaccagttaccctacccatacacaacggggatgagaaattgaatctcatccccatccccaataggttcaggtattc 31425750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 7779696 - 7779754
Alignment:
Q  136 tatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    |||||||| | |||| |||| ||||||||||||||||||||||||||||||||| ||||    
T  7779696 tatacttatctgttaccctacccatatccaacggggatgagaaattgaatctcatcccc 7779754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 10072174 - 10072256
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||| |||| |||| ||||| ||||| ||||||||||||||||||||| || | || || | ||||||||||||    
T  10072174 tcatatacttacctgttaccctacccatacccaacagggatgagaaattgaatctcatcctcgtccccgacgggttcgggtat 10072256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 27850730 - 27850649
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||| |||||||||||| |||||||||| |||||||||||||||||||||| | || |||| || |||| ||||| ||||||    
T  27850730 tcatacacttacccgtta-cctatccatacccaacggggatgagaaattgaaccccatccccgtccccaacgggtttgggtat 27850649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 41103329 - 41103411
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||| ||||||||||| |||| | ||| |||||||||||||||||||||||||||  ||| || || ||||||| ||||||    
T  41103329 tcatatgcttacccgttaccctacctatacccaacggggatgagaaattgaatctcattcccgtccccgatgggtttgggtat 41103411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 44734766 - 44734684
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||| ||||||||||| ||||| |||||| ||||||||||||||||| || | || ||||| | |||||| |||||    
T  44734766 tcatatacttatccgttatcctacccatacccaacgaggatgagaaattgaatcccatctccgtctccgacgggttcaggtat 44734684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 17885141 - 17885214
Alignment:
Q  142 tacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||| |||| || || | ||||| ||||||    
T  17885141 tacccgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccgacgggtttgggtat 17885214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 24752719 - 24752772
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    ||||||||||| ||||||||||| |||||| |||||| ||||||||||||||||    
T  24752719 tcatatacttatccgttatcctacccatattcaacggagatgagaaattgaatc 24752772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 29015365 - 29015305
Alignment:
Q  157 ccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||| ||||||||||||||||||| |||| || ||||||||||  |||||||    
T  29015365 ccatatccaacggagatgagaaattgaatctcatccccgtccccaatgggtttaggtattc 29015305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 18826277 - 18826226
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    |||||||||||||||||| |||| ||||| | ||||||||||||||||||||    
T  18826277 tcatatacttacccgttaccctacccatacctaacggggatgagaaattgaa 18826226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 217
Target Start/End: Original strand, 3920159 - 3920308
Alignment:
Q  75 aagtgggcatgacaatggggcggggtagggatgagttttaccttcctca-tct------ctattatcatatacttacccgttatcctatccatatccaac 167  Q
    |||| |||||| |||||||||||||| |||||| ||||||| ||||||| |||      | ||| ||| |||||||| ||||| ||||  |||| |||||    
T  3920159 aagtaggcatggcaatggggcggggtggggatgggttttacattcctcattctcatatccaattttcaaatacttactcgttaccctacacatacccaac 3920258  T
Q  168 ggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||| ||| |||||| |||| |||| ||||||| || ||||| |||||    
T  3920259 ggggattagatattgaacctcatccccgtctccaacggattcggatattc 3920308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 21702365 - 21702447
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||| || |||| |||||  |||||||||||||||||||||||  | |||| || || | ||||||||||||    
T  21702365 tcatatacttacccgctaccctacccatactcaacggggatgagaaattgaatcctatccccgtccccgacgggttcgggtat 21702447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 21750497 - 21750543
Alignment:
Q  171 gatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||    
T  21750497 gatgagaaattgaatctcatccccacctccaatgggttcgggtattc 21750543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 23328296 - 23328378
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||  |||| ||||  ||||||||| | |||||||||||| ||||||| |||| ||||| | ||||||||||||    
T  23328296 tcatatacttacttgttaccctacacatatccaatgtggatgagaaattaaatctcatccccgtctccgacgggttcgggtat 23328378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 25905314 - 25905396
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||| ||||| |||| ||||| |||||  |||||||||||||||||||| |||| || || | || |||||||||    
T  25905314 tcatatacttactcgttaccctacccatacccaacaaggatgagaaattgaatctcatccccgtccccgacggattcgggtat 25905396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 10996314 - 10996207
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctc-------tattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| | |||||||||||| |||| |       |||| ||||||||||||| ||||  ||| |||||| |||||||||    
T  10996314 ggcatggcaatggggcggggtggggacgggttttaccttccccatccccataccctattctcatatacttacctgttactctacccatattcaacgggga 10996215  T
Q  173 tgagaaat 180  Q
    ||||||||    
T  10996214 tgagaaat 10996207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 44845594 - 44845513
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtatt 216  Q
    ||||||||||  |||| |||| ||||||||||||| |||||||||||||||| || |||| ||  |||||| ||| ||||||    
T  44845594 atatacttacatgttaccctaaccatatccaacggagatgagaaattgaatcgcatccccatcctcaatggattcaggtatt 44845513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 32545852 - 32545916
Alignment:
Q  125 ctctattatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    ||||||| ||||||||||| | ||||||| | |||||| ||||| |||||||||||| |||||||    
T  32545852 ctctattttcatatacttatctgttatccaacccatattcaacgaggatgagaaattaaatctca 32545916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 39456384 - 39456304
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||| |||| |||| || || ||||||||||||||||||||||| ||| |||| || || | ||||| ||||||    
T  39456384 atatacttacctgttaccctacccctacccaacggggatgagaaattgaatttcatccccgtccccgacgggtttgggtat 39456304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 44794433 - 44794357
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttc 209  Q
    ||||||| ||||| |||| |||| ||||||| ||| |||||||||||| |||||||| |||| ||||| | ||||||    
T  44794433 tcatatatttacctgttaccctacccatatctaacagggatgagaaatcgaatctcatccccgtctccgaagggttc 44794357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 25783308 - 25783229
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcggg 212  Q
    ||||||||||||  |||| |||| |||||| ||| |||||||||||||||||| ||| | |  ||||||| |||||||||    
T  25783308 tcatatacttacatgttaccctacccatattcaatggggatgagaaattgaatttcatctctgtctccaacgggttcggg 25783229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 39316620 - 39316732
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcat-------ctctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||| ||||||| |||||| |||||||||||| |||       | | ||| ||||||| |||||||||| |||| ||||| |||||||| |    
T  39316620 ggcatggcaatggagcggggtggggatgggttttaccttccccattcccatacccgattctcatatatttacccgttaccctacccatacccaacggg-a 39316718  T
Q  173 tgagaaattgaatc 186  Q
    ||||||||||||||    
T  39316719 tgagaaattgaatc 39316732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 42005587 - 42005634
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaat 180  Q
    ||||||| ||||||||||  ||||||||||||||||| ||||||||||    
T  42005587 tcatatatttacccgttactctatccatatccaacggcgatgagaaat 42005634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 45379829 - 45379876
Alignment:
Q  147 gttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    |||| |||| ||||||| ||||||||||||||||||||||||| ||||    
T  45379829 gttaccctacccatatctaacggggatgagaaattgaatctcatcccc 45379876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 31393811 - 31393769
Alignment:
Q  158 catatccaacggggatgagaaattgaatctcacccccttctcc 200  Q
    |||||||||||| ||||||||||||||||||| |||| |||||    
T  31393811 catatccaacggagatgagaaattgaatctcatccccgtctcc 31393769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 33840755 - 33840821
Alignment:
Q  128 tattatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    |||| ||||||||||||| |||| |||| |||||  ||||||||||||||||| ||| |||| ||||    
T  33840755 tattctcatatacttacctgttaccctacccatactcaacggggatgagaaatcgaacctcatcccc 33840821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 45709263 - 45709177
Alignment:
Q  129 attatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||| ||||| ||||  |||| |||||||||| ||||| |||||||||||||||||| || |||| ||  | | ||||||||||||    
T  45709263 attatgatatatttacatgttaccctatccatacccaactgggatgagaaattgaatcccatccccgtcctcgacgggttcgggtat 45709177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 5432416 - 5432367
Alignment:
Q  160 tatccaacggggatgagaaattgaatctcacccccttctccaatgggttc 209  Q
    ||||||||||||||||||||| |||||||| |||| || |||| ||||||    
T  5432416 tatccaacggggatgagaaatcgaatctcatccccatccccaacgggttc 5432367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 26068841 - 26068917
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcat-ctctattatcatatacttacccgttatccta 155  Q
    |||||| |||||||||||||| ||||||||||||  ||||| ||| | ||| |  ||||||||||||||||| ||||    
T  26068841 ggcatggcaatggggcggggtggggatgagttttgtcttccccatcccctactcccatatacttacccgttacccta 26068917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 26093286 - 26093362
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcat-ctctattatcatatacttacccgttatccta 155  Q
    |||||| |||||||||||||| ||||||||||||  ||||| ||| | ||| |  ||||||||||||||||| ||||    
T  26093286 ggcatggcaatggggcggggtggggatgagttttgtcttccccatcccctactcccatatacttacccgttacccta 26093362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 27062812 - 27062864
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaat 185  Q
    ||||||||||||  | || |||| ||||| |||||||||||||||||||||||    
T  27062812 tcatatacttacttgctaccctacccatacccaacggggatgagaaattgaat 27062864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 56325 - 56242
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||| |||  || |||||||||||||||||||    
T  56325 catatacttacccgttaccctacccatatccaacagggatgagaaattgaatctcatccctatccccaatgggttcgggtattc 56242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 40248749 - 40248667
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| |||| ||||| | ||||||||||||    
T  40248749 tcatatacttatccgttatcctacccatatccaacgaggatgagaaattgaatctcatccccgtctccgacgggttcgggtat 40248667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 17220398 - 17220478
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggt 213  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |||| || || ||||||||||||    
T  17220398 tcatatacttacccgttaccctatccatatccaacagggatgagaaattgaatcccatccccgtccccgatgggttcgggt 17220478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 2184051 - 2183968
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||| ||||||| ||| |||||| |||||||||||||||||||||| ||| |||| || |||||||||||||||||||    
T  2184051 catatacttatccgttattctacccatattcaacggggatgagaaattgaatttcatccccgtccccaatgggttcgggtattc 2183968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 4594572 - 4594517
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4594572 catatacttacccattatcctatccatatccaacggggatgagaaattgaatctca 4594517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 15069014 - 15068931
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||||| |||| |||| ||||| |||||||||||||||||||||||||||  ||| || |||||||||||||||||||    
T  15069014 catatacttacctgttaccctacccatacccaacggggatgagaaattgaatctcattcccgtccccaatgggttcgggtattc 15068931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 1063190 - 1063272
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| | ||| ||||||||||||||||||||||||||| |||| || || ||||||||||||||    
T  1063190 tcatatacttacccgttaccctacctatacccaacggggatgagaaattgaatctcatccccatccccgatgggttcgggtat 1063272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 215
Target Start/End: Complemental strand, 34301626 - 34301479
Alignment:
Q  75 aagtgggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaac 167  Q
    |||| |||||| |||||||||||||| |||| | |||||||||||| |||| | ||       ||||||||||||||| |||| |||| ||||| |||||    
T  34301626 aagtaggcatggcaatggggcggggtggggacgggttttaccttccccatccccatacccgattatcatatacttacctgttaccctacccatacccaac 34301527  T
Q  168 ggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||||| || |||| || || | ||||||||||||    
T  34301526 ggggatgagaaattgaatcccatccccgtccccgacgggttcgggtat 34301479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 11255472 - 11255330
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    ||||||||||||||| ||||| |||| | |||||||||||| | |||| ||       | ||||||||||| |||||| ||||||||||  |||||||||    
T  11255472 ggcatgacaatggggtggggtggggacgtgttttaccttccccgtctccatacataattctcatatacttatccgttaccctatccatactcaacgggga 11255373  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || || | ||||||||||||    
T  11255372 tgagaaattgaatctcatccccgtccccgacgggttcgggtat 11255330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 15174279 - 15174196
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||||| |||| |||| |||||| ||| |||||||||||||||||||| | |||| || |||||||||||||||||||    
T  15174279 catatacttacctgttaccctacccatattcaatggggatgagaaattgaatcttatccccgtccccaatgggttcgggtattc 15174196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 2076243 - 2076165
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgg 211  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| |||| || || | ||||||||    
T  2076243 tcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccgacgggttcgg 2076165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 24870430 - 24870348
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| |||| ||  | ||||||| ||||||    
T  24870430 tcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtcctcgatgggtttgggtat 24870348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 24927630 - 24927712
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||||||||| || |||| || || | ||||||||||||    
T  24927630 tcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgggtat 24927712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 27058797 - 27058676
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttacct------tcctcat-ctctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| | |||||||||      ||| ||| ||||||| |||||||||||||||||| |||| |||||||||||||||     
T  27058797 ggcatggcaatggggcggggtggggacgggttttacctcccccgtccccatactctattctcatatacttacccgttaccctacccatatccaacggggg 27058698  T
Q  173 tgagaaattgaatctcaccccc 194  Q
    |||||||| |||||||| ||||    
T  27058697 tgagaaatagaatctcatcccc 27058676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 34776143 - 34776221
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgg 211  Q
    ||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||||| |||| || |||| ||||||||    
T  34776143 tcatatatttacctgttaacctacccatatccaacggggatgagaaattgaatctcatccccgtccccaacgggttcgg 34776221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 9642834 - 9642727
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatc-------tctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||| ||||| |||| | |||||||||||| ||||       |||||| ||||||||||||||||||||||| |||||||||| |||||    
T  9642834 ggcatggcaatggggtggggtggggacgggttttaccttccccatccccatactctattctcatatacttacccgttatcctacccatatccaatgggga 9642735  T
Q  173 tgagaaat 180  Q
    ||||||||    
T  9642734 tgagaaat 9642727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 2190288 - 2190228
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| ||||    
T  2190288 catatacttatccgttaccctacccatatccaacggggatgagaaattgaatctcatcccc 2190228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 34021153 - 34021218
Alignment:
Q  129 attatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    ||||||||||||||| |||||| ||||  ||||||||||||||||||||||||||| |||| ||||    
T  34021153 attatcatatacttatccgttaccctactcatatccaacggggatgagaaattgaacctcatcccc 34021218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 6388972 - 6388888
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||||| |||| |||| ||||||||| |||||||||||||| |||||||| |||| || || | |||||||| |||||    
T  6388972 tcatatacttacctgttaccctacccatatccagcggggatgagaaatcgaatctcatccccgtccccgacgggttcggatattc 6388888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 28977519 - 28977439
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||| |||| |||| ||||| |||||||||||||||||||||||| || || | || |||| ||||||||||||    
T  28977519 atatacttacctgttaccctacccatacccaacggggatgagaaattgaatcacatccacgtccccaacgggttcgggtat 28977439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 27932056 - 27932169
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| ||||||  ||||||||||||| || | ||       | |||||||||||||||||| |||| ||||||||||  ||||    
T  27932056 ggcatggcaatggggcggggtggggatggattttaccttcctcgtccccatacgcgattctcatatacttacccgttaccctacccatatccaataggga 27932155  T
Q  173 tgagaaattgaatc 186  Q
    ||||||||||||||    
T  27932156 tgagaaattgaatc 27932169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 32302741 - 32302823
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| |||||| ||||||||||||||||| || |||| |  || | ||||||||||||    
T  32302741 tcatatacttacccgttaccctacccatacccaacgaggatgagaaattgaatcccatccccgttcccgacgggttcgggtat 32302823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 39445969 - 39445887
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| | || | |||||||||||||||||||| |||| || || | ||||||||||||    
T  39445969 tcatatacttacccgttaccctacccatacctaatgaggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 39445887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 208
Target Start/End: Original strand, 40789248 - 40789321
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggtt 208  Q
    |||||||||||| |||| |||| |||||||||||||  |||||||||||||||||| |||| || ||||||||||    
T  40789248 catatacttacctgttacccta-ccatatccaacggaaatgagaaattgaatctcatccccatccccaatgggtt 40789321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 5858864 - 5858803
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    |||||||||||||||||| | || |||||| ||||||||||||||||||||| |||| ||||    
T  5858864 tcatatacttacccgttaccttacccatattcaacggggatgagaaattgaacctcatcccc 5858803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 29109225 - 29109143
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||| |||||||||| |||| ||||| | || ||| |||||||||||||||||| |||| ||||| | |||||| |||||    
T  29109225 tcatatatttacccgttaccctacccatacctaatgggtatgagaaattgaatctcatccccgtctccgacgggttctggtat 29109143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 36132322 - 36132266
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    |||||||||||  ||||||| ||  ||||| ||||||||||||||||||||||||||    
T  36132322 tcatatacttattcgttatcttacacatattcaacggggatgagaaattgaatctca 36132266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 8030822 - 8030881
Alignment:
Q  158 catatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||| ||||| ||||||||||||||| |||| || | ||| |||||||||||||    
T  8030822 catatccaaccgggataagaaattgaatctcatccccgtcccaaattggttcgggtattc 8030881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 14186025 - 14186076
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    |||||||||||||||||| ||||  |||| | ||||||||||||||||||||    
T  14186025 tcatatacttacccgttaccctacacatacctaacggggatgagaaattgaa 14186076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 17468937 - 17468988
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    ||||||||||| |||||| |||| |||||| |||||||||||| ||||||||    
T  17468937 tcatatacttatccgttaccctacccatattcaacggggatgataaattgaa 17468988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 24568632 - 24568671
Alignment:
Q  145 ccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  24568632 ccgttaccctacccatatccaacggggatgagaaattgaa 24568671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 4231126 - 4231044
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||| ||| |||||| |||| ||||| ||||||||||| | ||||||||||||| |||| || |  | ||||||||||||    
T  4231126 tcatataattatccgttaccctacccatacccaacggggataataaattgaatctcatccccatcccagacgggttcgggtat 4231044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 9476451 - 9476393
Alignment:
Q  157 ccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||| |||||||||||||| |||||||| |||| || |||| || |||||||||    
T  9476451 ccatatccagcggggatgagaaatcgaatctcatccccgtccccaacggattcgggtat 9476393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 10297140 - 10297214
Alignment:
Q  138 tacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcggg 212  Q
    |||||||||||||  ||| |||||||||||| |||||||||||| ||||| || | | || |||||||| |||||    
T  10297140 tacttacccgttacactacccatatccaacgaggatgagaaattaaatctgacacacgtccccaatgggatcggg 10297214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 34139127 - 34139204
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgg 211  Q
    ||||||||||| | ||||||||| |||||  ||||||| ||||||||||||| ||||||||  || || ||||||||||    
T  34139127 tcatatacttatctgttatcctaaccatactcaacggg-atgagaaattgaacctcacccctgtccccgatgggttcgg 34139204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 30481819 - 30481770
Alignment:
Q  137 atacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    ||||||| |||||||| || ||||||||||  ||||||||||||||||||    
T  30481819 atacttatccgttatcttacccatatccaaaagggatgagaaattgaatc 30481770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 45235751 - 45235804
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||| ||||||||||||| ||||  ||||||||||||| |||||| ||||||||    
T  45235751 tcatgtacttacccgttaccctactcatatccaacgggaatgagatattgaatc 45235804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 5699982 - 5700058
Alignment:
Q  141 ttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||| |||  ||||||||| ||||||||| |||| |||||||| |||| ||    ||||||||||||||||    
T  5699982 ttacccgttaccctgcccatatccatcggggatgaaaaatcgaatctcatccccgtccaggatgggttcgggtattc 5700058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 29936038 - 29936180
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatct-------ctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    ||||||||||||||||||||| |||||| ||||||| |||| | |||       | ||| |||||| ||||||||||| |||| ||||||||||||||||    
T  29936038 ggcatgacaatggggcggggtggggatgtgttttacgttccccgtctacatatccgattctcatatgcttacccgttaccctacccatatccaacgggga 29936137  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||| || |||| || || | ||||||||||||    
T  29936138 tgagaaattgaatcacatccccgtccccgacgggttcgggtat 29936180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 18354538 - 18354425
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| | |||||||||||| | |||||||       | |||||||||||||||||| |||| ||||||||||||||||    
T  18354538 ggcatggcaatggggcggggtggggacgggttttaccttccccgtctctatatccgattctcatatacttacccgttaccctacccatatccaacgggga 18354439  T
Q  173 tgagaaattgaatc 186  Q
    ||||||||||||||    
T  18354438 tgagaaattgaatc 18354425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 20774313 - 20774395
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||| || |||| || || | ||||||||||||    
T  20774313 tcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgggtat 20774395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 13390076 - 13390218
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    ||||||||||||||||||||| |||| | |||||||||||| | || | ||       | ||||||||||| |||||| |||| ||||||||||||||||    
T  13390076 ggcatgacaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttaaccgttaccctacccatatccaacgggga 13390175  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||| || |||| || || | ||||||||||||    
T  13390176 tgagaaattgaatcccatccccgtccccgacgggttcgggtat 13390218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 32594579 - 32594659
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| |||| |  || ||||||||||||||    
T  32594579 atatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtacccgatgggttcgggtat 32594659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 40087925 - 40087783
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    ||||||||||||||||||||| |||| | |||||||||||| | || | ||       | |||||||||||||||||| |||| ||||| |||| |||||    
T  40087925 ggcatgacaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaatgggga 40087826  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || || | ||||||||||||    
T  40087825 tgagaaattgaatctcatccccgtccccgacgggttcgggtat 40087783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 34673726 - 34673605
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| | ||||||| ||||||||| | ||       | |||||||||||||||||| |||| ||||||||||||||||    
T  34673726 ggcatggcaatggggcggggtggggacgggttttacattcctcatccccatatccgattctcatatacttacccgttaccctacccatatccaacgggga 34673627  T
Q  173 tgagaaattgaatctcaccccc 194  Q
    |||||||||||| |||| ||||    
T  34673626 tgagaaattgaacctcatcccc 34673605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 19572901 - 19572820
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| |||| || || | ||||| ||||||    
T  19572901 catatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccgacgggtttgggtat 19572820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 42440042 - 42439989
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  42440042 tcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatc 42439989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 51421576 - 51421637
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||||    
T  51421576 tcatatacttacccgttaccctactcatatccaacggggatgagaaattgaatctcatcccc 51421637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 5180732 - 5180788
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    |||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  5180732 tcatatacttacccattaccctacccatatccaacggggatgagaaattgaatctca 5180788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 16237733 - 16237649
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||| ||| || |||| | ||||||||||| ||||||||||||||||||| |||  || |||||||||||||||||||    
T  16237733 tcatatacttatccgctaccctacctatatccaacggagatgagaaattgaatctcatccctgtccccaatgggttcgggtattc 16237649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 17092427 - 17092285
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatct-------ctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| | |||||||||||||| ||        | ||| |||||| ||||||||||| ||||  |||||||||| ||||    
T  17092427 ggcatggcaatggggcggggtggggacgggttttaccttcctcgtcctcatatccgattctcatatgcttacccgttaccctacacatatccaacaggga 17092328  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || || | ||||||||||||    
T  17092327 tgagaaattgaatctcatccccgtccccgacgggttcgggtat 17092285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 17516093 - 17516165
Alignment:
Q  145 ccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||| ||||| ||||||||| || ||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  17516093 ccgttaccctattcatatccaatggagatgagaaattaaatctcacccccgtcttcaatgggttcgggtattc 17516165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 34610695 - 34610837
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||||| |||||||||||| | || | ||       | |||||||||||| ||||| |||| ||||| ||||||||||    
T  34610695 ggcatggcaatggggcggggtggggatgggttttaccttccccgtccccatacccgattctcatatacttactcgttaccctacccatacccaacgggga 34610794  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| || | || || | ||||||||||||    
T  34610795 tgagaaattgaatctcatcctcgtccccgacgggttcgggtat 34610837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 12719187 - 12719104
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||| |||||| |||| ||||||||||||||||||||| |||||||  || || | |||||| |||||||||||||||    
T  12719187 catatacttatccgttaccctacccatatccaacggggatgagatattgaattccatccacgtctccactgggttcgggtattc 12719104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 36187626 - 36187547
Alignment:
Q  136 tatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||||| || |||| || || |||| |||||||||    
T  36187626 tatacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatccccgtccccgatggattcgggtat 36187547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 3628379 - 3628321
Alignment:
Q  136 tatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||||    
T  3628379 tatacttacccgttaccctatccatacccaacggggataagaaattgaatctcatcccc 3628321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 23493732 - 23493650
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| |||||| ||||||||||||||||||||||| || |||| || |  | ||||||||||||    
T  23493732 tcatatacttacccgttaccctacccatattcaacggggatgagaaattgaatcccatccccgtccctgacgggttcgggtat 23493650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 50427061 - 50426980
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| |||||| ||||| |||||||||||||||||||| |||| || || | ||||||||||||    
T  50427061 tcatatacttacccgttaccctacccatattcaacgaggatgagaaattgaatctcatccccgtc-ccgacgggttcgggtat 50426980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 16433628 - 16433501
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    ||||||||||||||| ||| |||||| |||||||| ||||| | || ||||       | || ||||||||||||||| | |||||||||||||||| ||    
T  16433628 ggcatgacaatggggtgggatagggacgagttttatcttccccgtccctatatccgattctcttatacttacccgttaccttatccatatccaacggaga 16433529  T
Q  173 tgagaaattgaatctcacccccttctcc 200  Q
    |||||||||||| |||| |||| |||||    
T  16433528 tgagaaattgaacctcatccccgtctcc 16433501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 44792686 - 44792771
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca-cccccttctccaatgggttcgggtattc 217  Q
    |||||||||||||||||| |||| |||||| ||||||||||||||||||||| | || ||||| || || | ||||||||||||||    
T  44792686 tcatatacttacccgttaccctacccatattcaacggggatgagaaattgaaccccatcccccgtccccgacgggttcgggtattc 44792771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 10450488 - 10450406
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||||  |||| |||||| |||||||||||||||||||||||||||| |  |||| ||   |||||||||||||||||    
T  10450488 atatacttacatgttaccctatcaatatccaacggggatgagaaattgaatcccgtccccgtccttaatgggttcgggtattc 10450406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 24710539 - 24710621
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||| |||| |||| | |||  |||||||||||||||||||||||||| |||| || || | ||||||||||||    
T  24710539 tcatatacttacctgttaccctacctatactcaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 24710621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 28297614 - 28297696
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| || | ||||| |||||||| ||||||||||||||| || |||| || || | ||||||||||||    
T  28297614 tcatatacttacccgttacccgacccatacccaacgggaatgagaaattgaatcccatccccgtccccgacgggttcgggtat 28297696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 33294011 - 33293899
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctc--at-ctctattatcatatacttacccgttatcctatccatatccaacggggatgag 176  Q
    |||||||||||| |||||||| |||| | |||| |||||||||  || ||||||| | |||| |||||| |||| |||| ||| |  |||||||||||||    
T  33294011 ggcatgacaatgaggcggggtggggacgggtttcaccttcctcccatgctctattctaatatgcttacctgttaccctaaccaaactcaacggggatgag 33293912  T
Q  177 aaattgaatctca 189  Q
    |||||||||||||    
T  33293911 aaattgaatctca 33293899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 45866653 - 45866537
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcc------tcat-ctctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| | ||||||||||||      |||| ||| ||| ||||||||||||||||||  ||| | ||| ||||||||||    
T  45866653 ggcatggcaatggggcggggtggggacgtgttttaccttccccgtcctcatactcgattctcatatacttacccgttactctacctatacccaacgggga 45866554  T
Q  173 tgagaaattgaatctca 189  Q
    | |||||||||||||||    
T  45866553 taagaaattgaatctca 45866537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 49742328 - 49742267
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    ||||||| ||| |||||| |||||||||||| |||||||||||||||||||| |||| ||||    
T  49742328 tcatatatttatccgttaccctatccatatctaacggggatgagaaattgaacctcatcccc 49742267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 24237168 - 24237112
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    |||||||||||| ||||| || | ||||| |||||||||||||||||||||||||||    
T  24237168 tcatatacttactcgttaccccacccatacccaacggggatgagaaattgaatctca 24237112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 35077610 - 35077550
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    |||||||||||| |||| |||| ||||| ||||||| ||||||||||||||||||| ||||    
T  35077610 catatacttacctgttaccctacccatacccaacggagatgagaaattgaatctcatcccc 35077550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 13020370 - 13020429
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcaccccc 194  Q
    |||||||||||||||| |||| | |||  |||||||||||||||||||||||||| ||||    
T  13020370 atatacttacccgttaccctacctatactcaacggggatgagaaattgaatctcaacccc 13020429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 45460506 - 45460403
Alignment:
Q  83 atgacaatggggcggggtagggatgagttttaccttcctcatctctattatcatatacttacccgttatcctatccatatccaacggggatgagaaattg 182  Q
    |||||||||| |||| || |||| ||||||||| |||| |||| ||||  |||||||||||||||| | |||| |||||  || | |||||||||||| |    
T  45460506 atgacaatggagcggtgtggggacgagttttactttccccatccctatactcatatacttacccgtcaccctacccatactcagctgggatgagaaatcg 45460407  T
Q  183 aatc 186  Q
    ||||    
T  45460406 aatc 45460403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 17134628 - 17134706
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgg 211  Q
    |||||||||||||||||| ||||  ||||  |||| ||||||||||||||||||||| | || || |||| ||||||||    
T  17134628 tcatatacttacccgttaccctactcatactcaacagggatgagaaattgaatctcatctccgtccccaacgggttcgg 17134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 18328981 - 18329031
Alignment:
Q  135 atatacttacccgttatcctatccatatccaacggggatgagaaattgaat 185  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||||||||    
T  18328981 atatacttactcgttgttctacccatatccaacggggatgagaaattgaat 18329031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 38686334 - 38686416
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||| ||| |||||| |||| || |||||||||||||| ||||||||||||||| |||| || || | |||||| |||||    
T  38686334 tcatatatttatccgttaccctacccttatccaacggggatcagaaattgaatctcatccccgtccccgacgggttcaggtat 38686416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 217
Target Start/End: Complemental strand, 48024727 - 48024591
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctattatcatatacttacccgttatcctatccatatccaacggggatgagaaa 179  Q
    |||||| |||||| ||||||| ||||  |||||| |  |||||| | ||| | |||||||||||   |||||||||| ||||  ||||| |||| |||||    
T  48024727 ggcatggcaatggagcggggtggggaa-agttttgctatcctcacccctactctcatatacttatttgttatcctattcatactcaacgaggataagaaa 48024629  T
Q  180 ttgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||| |||| ||  |||| |||||||||||||    
T  48024628 ttgaatctcatccccgtccacaataggttcgggtattc 48024591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 23966479 - 23966621
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctatta-------tcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||||| |||| |||||||||||||| | || | || |       |||||||||||||| ||| |||| ||||| ||||||  ||    
T  23966479 ggcatggcaatggggcggggtggggacgagttttaccttccccgtccccataaccgattctcatatacttacccattaccctacccatacccaacgaaga 23966578  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||| || |||| || || | |||||| |||||    
T  23966579 tgagaaattgaatcccatccccgtccccgacgggttctggtat 23966621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 44615883 - 44615799
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||| ||||||||||||| |||| ||||||  |||||||||||||||||||| | || |||| || |  | ||||||||||||||    
T  44615883 tcatgtacttacccgttaccctacccatatttaacggggatgagaaattgaaccccatccccgtccctgacgggttcgggtattc 44615799  T

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Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 19892573 - 19892693
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||||||||| |||||||||||||| |||||| |||| | ||       | ||||||||||||  |||| |||| |||||   ||||||||    
T  19892573 ggcatggcaatggggcggg-tagggatgagtttttccttccccatccccatcccctactctcatatacttacttgttaccctacccatacataacgggga 19892671  T
Q  173 tgagaaattgaatctcaccccc 194  Q
    ||||||||||||||||| ||||    
T  19892672 tgagaaattgaatctcatcccc 19892693  T

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Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 34060408 - 34060345
Alignment:
Q  152 cctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||| |||||| ||||| |||||||||||||||||||| |||| || |  ||||||||||||||    
T  34060408 cctacccatattcaacgaggatgagaaattgaatctcatccccgtccctgatgggttcgggtat 34060345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 2514277 - 2514398
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttc------ctcat-ctctattatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    |||||| |||||| |||||||||||||||||||||| |||      ||||| | | ||| |||| | ||| | ||||| |||| | ||||||||||||||    
T  2514277 ggcatggcaatggagcggggtagggatgagttttacattccccgttctcatacccaattctcattttcttgcgcgttagcctacctatatccaacgggga 2514376  T
Q  173 tgagaaattgaatctcaccccc 194  Q
    |||||||||||| |||| ||||    
T  2514377 tgagaaattgaacctcatcccc 2514398  T

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Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 16903197 - 16903267
Alignment:
Q  145 ccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||| |||| ||||||||| |||||||||||||| ||||| || |||| || || | ||||||||||||    
T  16903197 ccgttaccctacccatatccatcggggatgagaaatcgaatcccatccccgtccccgacgggttcgggtat 16903267  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 34060481 - 34060441
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcc 120  Q
    ||||||||||||||||||||| |||| | ||||||||||||    
T  34060481 ggcatgacaatggggcggggtggggacgggttttaccttcc 34060441  T

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Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 39615983 - 39616039
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    |||||||||||| |||||  |||| |||||||||| | |||| ||||||||||||||    
T  39615983 tcatatacttactcgttactctattcatatccaacagagatgggaaattgaatctca 39616039  T

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Target: scaffold0519 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 9923 - 10065
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcatctctat-------tatcatatacttacccgttatcctatccatatccaacgggga 172  Q
    ||||||||||||||| ||||| |||| | |||||||||||| | |||| ||       | ||||||||||| |||||| ||||||||||  |||||||||    
T  9923 ggcatgacaatggggtggggtggggacgtgttttaccttccccgtctccatacataattctcatatacttatccgttaccctatccatactcaacgggga 10022  T
Q  173 tgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    ||||||||||||||||| |||| || || | ||||||||||||    
T  10023 tgagaaattgaatctcatccccgtccccgacgggttcgggtat 10065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 33261 - 33346
Alignment:
Q  129 attatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||||| | |||| |||||||||||||||||||||||||||| |||| | || || || | ||||||||||||    
T  33261 attatcatatacttacccgtca-cctacccatatccaacggggatgagaaattgaacctcatctccgtccccgacgggttcgggtat 33346  T

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Target: scaffold0036 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 33076 - 33158
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| |||||||| |||||||||||||||||| |||| || || | || |||||||||    
T  33076 tcatatacttacccgttaccctacccatacccaacgggaatgagaaattgaatctcatccccgtccccgacggattcgggtat 33158  T

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Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 90278 - 90360
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||| |||| || || | ||||| ||||||    
T  90278 tcatatacttacccgttaccctatccatacccaacagggatgagaaattgaacctcatccccgtccccgacgggtttgggtat 90360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 4285 - 4227
Alignment:
Q  128 tattatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatc 186  Q
    |||| |||||||||||||||||| |||| |||||  ||||| |||||||||||||||||    
T  4285 tattctcatatacttacccgttaccctacccatacgcaacgaggatgagaaattgaatc 4227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 214
Target Start/End: Original strand, 67408 - 67488
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggta 214  Q
    |||||| ||||| |||| |||| |||||| ||| |||||||||||||||||||||| |||| |  ||||||||||||||||    
T  67408 catatatttacctgttaccctacccatattcaatggggatgagaaattgaatctcatccccattcccaatgggttcgggta 67488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 214
Target Start/End: Original strand, 75251 - 75331
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggta 214  Q
    |||||| ||||| |||| |||| |||||| ||| |||||||||||||||||||||| |||| |  ||||||||||||||||    
T  75251 catatatttacctgttaccctacccatattcaatggggatgagaaattgaatctcatccccattcccaatgggttcgggta 75331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 32931 - 32849
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||||||||||||||| |||| ||||| | || | |||||||||||||||||||| |||| || || | ||||||||||||    
T  32931 tcatatacttacccgttaccctacccatacctaatgaggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 32849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 211043 - 211124
Alignment:
Q  136 tatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||||| |||| |||| | ||| ||||||||||||||||||||||||||| |||| || ||| |||| | ||||||||    
T  211043 tatacttacctgttaccctacctatacccaacggggatgagaaattgaatctcatccccgtccccattgggattgggtattc 211124  T

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Target: scaffold1630 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1630
Description:

Target: scaffold1630; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 1304 - 1360
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    ||||||||||| | |||| |||||||||| | |||||||||||||||||||||||||    
T  1304 tcatatacttatctgttaccctatccatacctaacggggatgagaaattgaatctca 1360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 35836 - 35919
Alignment:
Q  134 catatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtattc 217  Q
    ||||||||| ||||||| ||||  ||||||||||||||||||||||||||| | || |||| |  || | ||||||||||||||    
T  35836 catatacttgcccgttaccctactcatatccaacggggatgagaaattgaaccacatccccgttcccgacgggttcgggtattc 35919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 3735 - 3689
Alignment:
Q  141 ttacccgttatcctatccatatccaacggggatgagaaattgaatct 187  Q
    |||||||||| |||||||||| |||||| ||||||||||||||||||    
T  3735 ttacccgttaccctatccatacccaacgaggatgagaaattgaatct 3689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 21155 - 21067
Alignment:
Q  127 ctattatcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggtat 215  Q
    |||||| || ||||||||| |||||||||| |||||  |||||||||||| | | ||||| || |||| ||||| ||| ||||||||||    
T  21155 ctattaacaaatacttacctgttatcctatacatatttaacggggatgagtattcgaatcccatccccatctccgatgagttcgggtat 21067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 3958 - 4020
Alignment:
Q  152 cctatccatatccaacggggatgagaaattgaatctcacccccttctccaatgggttcgggta 214  Q
    |||| ||||| |||||||||||||||||||||||| || |||| || || |||||||||||||    
T  3958 cctacccatacccaacggggatgagaaattgaatcacatccccgtccccgatgggttcgggta 4020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 14458 - 14509
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    ||||||||||||  |||| |||| |||||| |||||||||||||||||||||    
T  14458 tcatatacttacttgttaccctacccatattcaacggggatgagaaattgaa 14509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 14551 - 14500
Alignment:
Q  133 tcatatacttacccgttatcctatccatatccaacggggatgagaaattgaa 184  Q
    ||||||||||||| |||| |||| ||||| ||||| ||||||||||||||||    
T  14551 tcatatacttacctgttaccctacccatacccaacagggatgagaaattgaa 14500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 217
Target Start/End: Complemental strand, 128574 - 128436
Alignment:
Q  80 ggcatgacaatggggcggggtagggatgagttttaccttcctcat-ctctattatcatatacttacccgttatcctatccatatccaacggggatgagaa 178  Q
    |||||| |||||||||||||| |||| ||||||| |||||| ||| | ||| |  ||||| ||||||||||| | ||  |||| |||||  ||||| |||    
T  128574 ggcatggcaatggggcggggtggggacgagttttgccttccccatcccctactcccatatgcttacccgttaccttactcatacccaacatggatgtgaa 128475  T
Q  179 attgaatctcacccccttctccaatgggttcgggtattc 217  Q
    |||||||  || |||  || ||||| |||||||||||||    
T  128474 attgaattccatccctgtccccaataggttcgggtattc 128436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 740 - 788
Alignment:
Q  141 ttacccgttatcctatccatatccaacggggatgagaaattgaatctca 189  Q
    ||||||||||  ||| |||||| |||||| |||||||||||||||||||    
T  740 ttacccgttacgctacccatattcaacggagatgagaaattgaatctca 788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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