View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17992_low_16 (Length: 319)
Name: NF17992_low_16
Description: NF17992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17992_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 17 - 297
Target Start/End: Complemental strand, 22766607 - 22766326
Alignment:
| Q |
17 |
aattgatatatcattcatgccttgtcacatttattgattttttgattttagtataagatgtatatatgttcattatttaatgatgttgattcattcacag |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
22766607 |
aattgatatatcattcatgccttgtcacatttattgattttttgattttagtataagatgcatatatgttcattatttaatgatgttgattcattcacag |
22766508 |
T |
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| Q |
117 |
aagtgatttatatgtgttttctgttatctattcagattgcaggcagtgatggaaactgaggatgcggtgtttctcgtttatgagcattttcacactagtc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22766507 |
aagtgatttatatgtgttttctgttatctattcagattgcaggcagtgatggaaactgaggatgcggtgtttctcgtttatgagcattttcacactagtc |
22766408 |
T |
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| Q |
217 |
ttcg-aaacacctcgccaatccggagtttttaaacattccaaactggaaaaaagtaagtcaacttttgttaacaattctgtg |
297 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |
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| T |
22766407 |
ttcgaaaacacctcgccaatccggagtttttaaacattccaaactggaaaaaagtaagtcatcttttgttaacaattatgtg |
22766326 |
T |
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