View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17992_low_19 (Length: 302)

Name: NF17992_low_19
Description: NF17992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17992_low_19
NF17992_low_19
[»] chr5 (45 HSPs)
chr5 (79-302)||(1590018-1590225)
chr5 (177-302)||(17201177-17201302)
chr5 (173-302)||(32717993-32718122)
chr5 (174-292)||(16365679-16365797)
chr5 (173-275)||(17557903-17558005)
chr5 (169-300)||(12436746-12436877)
chr5 (191-302)||(39614797-39614908)
chr5 (177-302)||(17202839-17202964)
chr5 (177-276)||(19803610-19803708)
chr5 (174-302)||(11992229-11992357)
chr5 (173-256)||(36060248-36060331)
chr5 (174-300)||(8544745-8544870)
chr5 (179-302)||(20201585-20201712)
chr5 (174-275)||(36437381-36437482)
chr5 (178-302)||(32474129-32474252)
chr5 (174-264)||(249617-249707)
chr5 (173-271)||(28619934-28620034)
chr5 (190-302)||(36246296-36246408)
chr5 (175-294)||(13220055-13220174)
chr5 (173-252)||(37269395-37269474)
chr5 (173-302)||(1583405-1583534)
chr5 (198-296)||(19924860-19924957)
chr5 (198-296)||(19931808-19931906)
chr5 (173-261)||(42674141-42674229)
chr5 (188-302)||(39940319-39940434)
chr5 (178-241)||(18413424-18413487)
chr5 (240-302)||(14654941-14655003)
chr5 (211-276)||(17591631-17591696)
chr5 (185-294)||(36706986-36707100)
chr5 (240-296)||(19922151-19922207)
chr5 (176-235)||(14654893-14654952)
chr5 (173-235)||(11825533-11825595)
chr5 (200-277)||(14543720-14543797)
chr5 (248-302)||(249553-249607)
chr5 (190-291)||(14967069-14967176)
chr5 (15-52)||(1589952-1589989)
chr5 (176-253)||(9948839-9948916)
chr5 (189-291)||(39585777-39585881)
chr5 (230-302)||(36194033-36194105)
chr5 (202-302)||(39584798-39584898)
chr5 (178-237)||(10704399-10704458)
chr5 (248-299)||(11825447-11825498)
chr5 (248-302)||(43346683-43346737)
chr5 (189-242)||(1437058-1437111)
chr5 (173-234)||(43346761-43346822)
[»] chr8 (40 HSPs)
chr8 (176-302)||(7578216-7578342)
chr8 (169-302)||(25496592-25496725)
chr8 (173-283)||(32233575-32233685)
chr8 (174-302)||(9455181-9455310)
chr8 (177-302)||(16599386-16599511)
chr8 (169-302)||(25400413-25400546)
chr8 (173-302)||(34146130-34146259)
chr8 (174-302)||(3443738-3443866)
chr8 (163-277)||(1358944-1359058)
chr8 (183-302)||(4418527-4418645)
chr8 (183-299)||(14896586-14896702)
chr8 (185-302)||(1530603-1530719)
chr8 (175-302)||(27231723-27231849)
chr8 (172-302)||(40557157-40557286)
chr8 (172-302)||(41411473-41411602)
chr8 (173-277)||(30887899-30888002)
chr8 (173-264)||(3741557-3741647)
chr8 (189-302)||(7695303-7695416)
chr8 (173-253)||(29315954-29316034)
chr8 (185-277)||(44666218-44666310)
chr8 (173-235)||(2742997-2743059)
chr8 (173-234)||(16393667-16393728)
chr8 (177-236)||(34038858-34038917)
chr8 (187-297)||(43026703-43026814)
chr8 (202-301)||(45083036-45083135)
chr8 (240-302)||(16393718-16393780)
chr8 (217-302)||(39628298-39628384)
chr8 (217-302)||(39637848-39637934)
chr8 (185-250)||(36682501-36682566)
chr8 (247-302)||(3741656-3741711)
chr8 (240-302)||(5870769-5870831)
chr8 (218-262)||(1256777-1256821)
chr8 (174-291)||(38401512-38401631)
chr8 (184-274)||(39140397-39140483)
chr8 (259-302)||(2742946-2742989)
chr8 (190-273)||(12687447-12687530)
chr8 (247-302)||(29315879-29315934)
chr8 (247-302)||(36682579-36682633)
chr8 (244-302)||(38457289-38457347)
chr8 (183-277)||(4418918-4419012)
[»] chr4 (44 HSPs)
chr4 (173-302)||(38434248-38434377)
chr4 (173-298)||(50720846-50720971)
chr4 (173-302)||(45635465-45635594)
chr4 (174-302)||(45666247-45666375)
chr4 (179-302)||(9089627-9089750)
chr4 (173-295)||(24074131-24074253)
chr4 (173-302)||(19443582-19443711)
chr4 (183-302)||(23529471-23529591)
chr4 (180-302)||(24538317-24538439)
chr4 (173-298)||(38045359-38045484)
chr4 (173-302)||(38840429-38840558)
chr4 (173-302)||(54982767-54982896)
chr4 (179-285)||(6949044-6949150)
chr4 (173-302)||(46195693-46195822)
chr4 (191-302)||(37209997-37210108)
chr4 (185-275)||(21342249-21342339)
chr4 (170-302)||(30913477-30913608)
chr4 (194-301)||(20782436-20782543)
chr4 (183-302)||(25490419-25490538)
chr4 (179-300)||(49299875-49299997)
chr4 (173-241)||(17330775-17330843)
chr4 (210-298)||(37371422-37371509)
chr4 (188-302)||(21956491-21956605)
chr4 (208-302)||(34032010-34032104)
chr4 (184-287)||(27650852-27650958)
chr4 (183-286)||(46196822-46196926)
chr4 (173-264)||(668104-668195)
chr4 (173-264)||(33889523-33889613)
chr4 (172-233)||(38044987-38045048)
chr4 (246-302)||(2492863-2492919)
chr4 (183-298)||(29961523-29961643)
chr4 (197-252)||(30912606-30912661)
chr4 (238-297)||(33808885-33808944)
chr4 (247-302)||(33889622-33889677)
chr4 (240-302)||(25493839-25493901)
chr4 (202-277)||(46016625-46016700)
chr4 (248-302)||(668040-668094)
chr4 (248-302)||(41502560-41502614)
chr4 (188-253)||(23687135-23687200)
chr4 (191-271)||(28130455-28130535)
chr4 (244-292)||(49263014-49263062)
chr4 (188-277)||(46250003-46250092)
chr4 (173-234)||(49262959-49263020)
chr4 (173-206)||(53392596-53392629)
[»] chr3 (43 HSPs)
chr3 (173-302)||(45646545-45646674)
chr3 (173-302)||(25841945-25842074)
chr3 (169-297)||(19234007-19234135)
chr3 (178-301)||(5493503-5493626)
chr3 (176-302)||(2093724-2093850)
chr3 (176-301)||(45759965-45760090)
chr3 (163-302)||(296369-296509)
chr3 (185-302)||(9588702-9588819)
chr3 (170-302)||(25342389-25342521)
chr3 (173-302)||(20841266-20841393)
chr3 (189-302)||(633295-633408)
chr3 (173-302)||(34668627-34668756)
chr3 (184-291)||(19578288-19578395)
chr3 (173-292)||(37030988-37031106)
chr3 (181-302)||(2440662-2440781)
chr3 (173-296)||(21959700-21959822)
chr3 (179-289)||(375697-375807)
chr3 (172-302)||(54675193-54675322)
chr3 (173-302)||(27817363-27817490)
chr3 (179-285)||(27264065-27264170)
chr3 (217-291)||(1272415-1272489)
chr3 (163-292)||(15638508-15638635)
chr3 (173-235)||(7259767-7259829)
chr3 (189-302)||(19187676-19187789)
chr3 (183-285)||(1405182-1405284)
chr3 (183-277)||(10614555-10614649)
chr3 (185-275)||(29556540-29556629)
chr3 (79-152)||(19234168-19234240)
chr3 (173-264)||(21934558-21934649)
chr3 (185-264)||(44940942-44941021)
chr3 (225-302)||(20141021-20141098)
chr3 (225-302)||(23272051-23272128)
chr3 (248-302)||(21934494-21934548)
chr3 (176-234)||(45667420-45667478)
chr3 (188-277)||(45652471-45652565)
chr3 (176-234)||(16237651-16237709)
chr3 (248-302)||(44940878-44940932)
chr3 (259-300)||(7259718-7259759)
chr3 (174-234)||(2599027-2599087)
chr3 (248-302)||(38751097-38751151)
chr3 (189-255)||(39492050-39492116)
chr3 (240-298)||(45667468-45667526)
chr3 (240-297)||(16237604-16237661)
[»] chr2 (43 HSPs)
chr2 (173-300)||(27746414-27746541)
chr2 (173-302)||(150293-150420)
chr2 (171-302)||(20171453-20171584)
chr2 (176-300)||(42756740-42756864)
chr2 (169-302)||(15507394-15507525)
chr2 (173-302)||(21252527-21252656)
chr2 (184-302)||(4316654-4316773)
chr2 (199-302)||(44898083-44898186)
chr2 (173-302)||(25965887-25966016)
chr2 (173-302)||(38589315-38589444)
chr2 (163-302)||(36244050-36244189)
chr2 (176-302)||(4959395-4959521)
chr2 (168-302)||(41540986-41541120)
chr2 (173-302)||(3309852-3309980)
chr2 (173-277)||(11073996-11074098)
chr2 (183-302)||(11083859-11083978)
chr2 (163-299)||(33659638-33659775)
chr2 (173-287)||(20891332-20891445)
chr2 (174-302)||(1397402-1397531)
chr2 (188-299)||(29882183-29882294)
chr2 (173-302)||(16806564-16806693)
chr2 (173-302)||(16845845-16845974)
chr2 (189-291)||(45273440-45273542)
chr2 (183-302)||(4700975-4701094)
chr2 (177-299)||(33659507-33659630)
chr2 (208-302)||(158105-158199)
chr2 (189-297)||(32113373-32113482)
chr2 (173-298)||(34424794-34424919)
chr2 (202-302)||(1770193-1770293)
chr2 (189-297)||(41117387-41117496)
chr2 (177-277)||(37360287-37360387)
chr2 (188-302)||(408502-408615)
chr2 (179-296)||(42872273-42872390)
chr2 (202-299)||(13140906-13141002)
chr2 (223-302)||(13386420-13386498)
chr2 (201-296)||(2218176-2218273)
chr2 (240-302)||(29408805-29408867)
chr2 (245-302)||(37814534-37814591)
chr2 (259-302)||(7486330-7486373)
chr2 (245-302)||(12411667-12411724)
chr2 (245-302)||(12423727-12423784)
chr2 (173-234)||(29408857-29408918)
chr2 (192-277)||(34847159-34847247)
[»] chr7 (41 HSPs)
chr7 (173-302)||(4962949-4963078)
chr7 (174-302)||(15643281-15643409)
chr7 (173-302)||(39430614-39430743)
chr7 (169-302)||(37124115-37124248)
chr7 (173-301)||(35793124-35793252)
chr7 (173-275)||(14771449-14771551)
chr7 (173-275)||(15221901-15222003)
chr7 (184-302)||(2798562-2798679)
chr7 (184-302)||(28226504-28226622)
chr7 (177-302)||(2273525-2273651)
chr7 (173-302)||(4567261-4567390)
chr7 (172-302)||(36412849-36412978)
chr7 (173-302)||(10535021-10535150)
chr7 (173-302)||(24394238-24394367)
chr7 (179-302)||(3835679-3835800)
chr7 (175-302)||(27723237-27723364)
chr7 (163-277)||(39247328-39247442)
chr7 (170-302)||(39599702-39599835)
chr7 (169-250)||(46672095-46672176)
chr7 (173-302)||(25290565-25290694)
chr7 (174-298)||(44549977-44550101)
chr7 (189-302)||(7809208-7809321)
chr7 (223-302)||(16196781-16196859)
chr7 (224-302)||(43368781-43368859)
chr7 (176-262)||(47541716-47541800)
chr7 (181-302)||(8614843-8614961)
chr7 (179-264)||(39427326-39427411)
chr7 (208-277)||(39617524-39617593)
chr7 (183-277)||(27229804-27229899)
chr7 (173-240)||(38707252-38707318)
chr7 (240-302)||(10026227-10026291)
chr7 (240-302)||(39432604-39432666)
chr7 (211-276)||(14735092-14735157)
chr7 (192-299)||(6655093-6655204)
chr7 (259-302)||(4678434-4678477)
chr7 (248-302)||(39427421-39427476)
chr7 (184-273)||(1719913-1720003)
chr7 (192-250)||(2271947-2272004)
chr7 (202-252)||(7378454-7378504)
chr7 (200-277)||(42509871-42509949)
chr7 (229-273)||(37072425-37072467)
[»] chr6 (22 HSPs)
chr6 (173-302)||(8049126-8049255)
chr6 (173-302)||(9095783-9095912)
chr6 (174-302)||(21527338-21527466)
chr6 (173-302)||(7972646-7972775)
chr6 (175-302)||(4665827-4665954)
chr6 (173-302)||(25056436-25056566)
chr6 (163-264)||(26252669-26252770)
chr6 (178-302)||(2437849-2437973)
chr6 (184-302)||(6111137-6111255)
chr6 (175-292)||(4184638-4184755)
chr6 (202-302)||(14093800-14093900)
chr6 (202-292)||(23410459-23410549)
chr6 (229-302)||(34889064-34889137)
chr6 (223-302)||(4122778-4122857)
chr6 (188-291)||(27907555-27907663)
chr6 (189-275)||(21014257-21014342)
chr6 (183-256)||(31658623-31658696)
chr6 (184-302)||(31660455-31660568)
chr6 (246-292)||(9353140-9353186)
chr6 (248-302)||(26252605-26252659)
chr6 (210-277)||(6396643-6396711)
chr6 (208-302)||(12406621-12406715)
[»] chr1 (37 HSPs)
chr1 (173-302)||(2655659-2655788)
chr1 (173-302)||(11238258-11238387)
chr1 (177-301)||(36319983-36320106)
chr1 (174-302)||(1674782-1674908)
chr1 (178-301)||(6295761-6295884)
chr1 (173-264)||(52414860-52414951)
chr1 (172-302)||(3900967-3901096)
chr1 (172-302)||(50488774-50488903)
chr1 (175-302)||(788298-788423)
chr1 (183-302)||(43021089-43021208)
chr1 (178-269)||(39386646-39386737)
chr1 (190-302)||(10101684-10101792)
chr1 (208-302)||(13254772-13254866)
chr1 (225-299)||(10430538-10430612)
chr1 (178-264)||(23699505-23699591)
chr1 (185-302)||(31623124-31623241)
chr1 (173-264)||(32768916-32769006)
chr1 (173-253)||(30279957-30280037)
chr1 (210-277)||(23698747-23698814)
chr1 (170-295)||(39157001-39157127)
chr1 (197-302)||(52281688-52281793)
chr1 (183-298)||(21967174-21967289)
chr1 (248-302)||(23699441-23699495)
chr1 (248-302)||(40519212-40519266)
chr1 (184-277)||(4396093-4396185)
chr1 (188-257)||(24140353-24140422)
chr1 (183-235)||(21535881-21535933)
chr1 (248-302)||(4671439-4671493)
chr1 (252-302)||(32769020-32769070)
chr1 (202-256)||(37710523-37710577)
chr1 (248-302)||(52414961-52415015)
chr1 (208-253)||(4671373-4671418)
chr1 (240-287)||(21535845-21535892)
chr1 (189-250)||(20769494-20769555)
chr1 (261-302)||(39157128-39157169)
chr1 (189-233)||(32186472-32186516)
chr1 (184-252)||(47680749-47680817)
[»] scaffold0005 (2 HSPs)
scaffold0005 (173-302)||(256691-256820)
scaffold0005 (174-302)||(272388-272516)
[»] scaffold1130 (1 HSPs)
scaffold1130 (173-296)||(332-455)
[»] scaffold0118 (2 HSPs)
scaffold0118 (183-302)||(14876-14994)
scaffold0118 (183-277)||(15281-15373)
[»] scaffold1327 (1 HSPs)
scaffold1327 (177-302)||(822-947)
[»] scaffold0188 (1 HSPs)
scaffold0188 (186-302)||(6403-6519)
[»] scaffold0006 (2 HSPs)
scaffold0006 (183-235)||(46639-46691)
scaffold0006 (240-296)||(46594-46650)
[»] scaffold0012 (1 HSPs)
scaffold0012 (173-241)||(202269-202331)


Alignment Details
Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 79 - 302
Target Start/End: Original strand, 1590018 - 1590225
Alignment:
Q  79 aggggaataaattggttttggattgcccttttcattttcaattatacccttaaccaaatttatgcagaaaaatgcatatatatttcgtcctagtgtgaat 178  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||  ||||||| ||    
T  1590018 aggggaataaattggttttggactgcccttttcattttcaattatacccttaactaaatttatggagaaaaatgcatatatatttcgttttagtgtggat 1590117  T
Q  179 ttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattc 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||| |||||| |||||||||||||     
T  1590118 ttttcgttcctatttaactgtcgttttgatattttaaaggtatga----------------tttgtcaattactcttatcttttttaataaaactaatta 1590201  T
Q  279 atgctatatatttgaaaaactaaa 302  Q
    ||||||||||||||||||||||||    
T  1590202 atgctatatatttgaaaaactaaa 1590225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 177 - 302
Target Start/End: Original strand, 17201177 - 17201302
Alignment:
Q  177 atttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaat 276  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  17201177 atttttcgttcctatttaactgtcttttttatattttaagggtatgatttgtcaattatatcatttgtcaattactcttatctttttcaataaaactaat 17201276  T
Q  277 tcatgctatatatttgaaaaactaaa 302  Q
    | ||||||| |||||| |||||||||    
T  17201277 taatgctatctatttggaaaactaaa 17201302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 32718122 - 32717993
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||||||||||||||||||||||| | |||||| | ||| |||||||||||||||||||||||| ||| |||||  ||||||||| ||||    
T  32718122 gtgaatttttcgttcctatttaactgtcgttttggttttttaaggatataatttgtcaattataccctttgtcagttattcttatatttttcaattaaac 32718023  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||||||||||||||||||||||||    
T  32718022 taattaatgctatatatttgaaaaactaaa 32717993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 174 - 292
Target Start/End: Original strand, 16365679 - 16365797
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaact 273  Q
    ||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||  |||||||||||||||    
T  16365679 tgaattttttgttcctatttaattatcgttttgatattttaaaggtatgatttgtcaattatactttttgtcaattattcttatatttttcaataaaact 16365778  T
Q  274 aattcatgctatatatttg 292  Q
    ||||  |||||||||||||    
T  16365779 aattagtgctatatatttg 16365797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 17557903 - 17558005
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||  |||||||||| |||    
T  17557903 gtgaatttttcgttcctatttaattgtcgttttgatattttaagggtatgatttgtcaattataccctttgtcaattattcttatatttttcaatataac 17558002  T
Q  273 taa 275  Q
    |||    
T  17558003 taa 17558005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 169 - 300
Target Start/End: Complemental strand, 12436877 - 12436746
Alignment:
Q  169 tagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaata 268  Q
    |||||| |||||| |||||||||||||| ||  |||||||||||||| ||||  |||| |||||||||| ||||||||||||||||||  ||||||||||    
T  12436877 tagtgtaaattttgcgttcctatttaacggtgtttttgatattttaatggtacaatttatcaattatacgctttgtcaattactcttatatttttcaata 12436778  T
Q  269 aaactaattcatgctatatatttgaaaaacta 300  Q
    ||||||||| ||||||| ||||||||||||||    
T  12436777 aaactaattaatgctatctatttgaaaaacta 12436746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 39614797 - 39614908
Alignment:
Q  191 tttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatt 290  Q
    |||||||||||||||| |||||||||| || ||||||||||||||| ||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||    
T  39614797 tttaactgtcgttttggtattttaaagatacgatttgtcaattatatcctttgttaattactcttatctttttcaacaaaactaattaatgctatatatt 39614896  T
Q  291 tgaaaaactaaa 302  Q
    ||||||| ||||    
T  39614897 tgaaaaattaaa 39614908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 177 - 302
Target Start/End: Complemental strand, 17202964 - 17202839
Alignment:
Q  177 atttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaat 276  Q
    ||||||| |||||||||||||||| ||||  |||||||| |||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  17202964 atttttcattcctatttaactgtcttttttgtattttaagggtatgatttttcaattataccctttgtcaattacttttatctttatcaataaaactaat 17202865  T
Q  277 tcatgctatatatttgaaaaactaaa 302  Q
    | ||| ||| |||||| |||||||||    
T  17202864 taatgttatctatttggaaaactaaa 17202839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 19803610 - 19803708
Alignment:
Q  177 atttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaat 276  Q
    |||||||||| ||||||||||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  19803610 atttttcgtttctatttaactgtc-ttttggtattttaagggtacgatttgtcaattataccctttgtcaattacttttatctttttcaataaaactaat 19803708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 302
Target Start/End: Complemental strand, 11992357 - 11992229
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaact 273  Q
    ||||||||  |||||||||||||| || ||||| ||||||||||||| ||||||||||||||||  | ||||||||||| ||| |||||||| ||||| |    
T  11992357 tgaattttctgttcctatttaactttctttttggtattttaaaggtacgatttgtcaattatacaatctgtcaattacttttatctttttcagtaaaatt 11992258  T
Q  274 aattcatgctatatatttgaaaaactaaa 302  Q
    |||| ||||||| |||||| |||||||||    
T  11992257 aattaatgctatttatttggaaaactaaa 11992229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 36060331 - 36060248
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactctta 256  Q
    |||||||||||||||||||||||||||||||||| ||||||||  ||| |||||||| ||||||||||||||||||||||||||    
T  36060331 gtgaatttttcgttcctatttaactgtcgttttggtattttaagtgtacgatttgtcgattataccctttgtcaattactctta 36060248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 8544870 - 8544745
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaact 273  Q
    |||||||||||||||||||||| || | ||||| |||||||| |||| ||||||||||||||| | | ||||||||||||||| ||||||||||||||||    
T  8544870 tgaatttttcgttcctatttaattgcc-ttttggtattttaatggtacgatttgtcaattatatcatctgtcaattactcttatctttttcaataaaact 8544772  T
Q  274 aattcatgctatatatttgaaaaacta 300  Q
    |||| | | ||| |||||| |||||||    
T  8544771 aattaacgttatttatttggaaaacta 8544745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 179 - 302
Target Start/End: Original strand, 20201585 - 20201712
Alignment:
Q  179 ttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaatt----actcttacctttttcaataaaacta 274  Q
    ||||||||| |||||||||||| || || |||||||| ||||| |||||||||||||||||||||||||||    ||| |||  ||||||||||||||||    
T  20201585 ttttcgttcttatttaactgtctttctggtattttaagggtataatttgtcaattataccctttgtcaatttcttacttttatatttttcaataaaacta 20201684  T
Q  275 attcatgctatatatttgaaaaactaaa 302  Q
    ||| ||| |||||||||| |||||||||    
T  20201685 attaatgttatatatttggaaaactaaa 20201712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 174 - 275
Target Start/End: Complemental strand, 36437482 - 36437381
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaact 273  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||  ||| ||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  36437482 tgaatttttcgttactatttaactgtctttttggtattttaagcgtacgatttttcaattatatcctttatcaattactcttatctttttcaataaaact 36437383  T
Q  274 aa 275  Q
    ||    
T  36437382 aa 36437381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 302
Target Start/End: Original strand, 32474129 - 32474252
Alignment:
Q  178 tttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    ||||||||||||||||||||||| ||||  |||||||| |||| |||||| |||||||||||||| |||||||||| |   |||||||||||||||||||    
T  32474129 tttttcgttcctatttaactgtcttttttgtattttaagggtacgatttgccaattataccctttatcaattactcat-tttttttcaataaaactaatt 32474227  T
Q  278 catgctatatatttgaaaaactaaa 302  Q
     ||||||| |||||| |||| ||||    
T  32474228 aatgctatctatttggaaaattaaa 32474252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 174 - 264
Target Start/End: Complemental strand, 249707 - 249617
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttc 264  Q
    ||||||||| ||||||||||||||||| ||||  |||||||| | ||||||||||||||||||||||||||||||||||| || |||||||    
T  249707 tgaattttttgttcctatttaactgtcattttagtattttaaggatatgatttgtcaattataccctttgtcaattactcataactttttc 249617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 271
Target Start/End: Original strand, 28619934 - 28620034
Alignment:
Q  173 gtgaatttttcgttcctatttaac--tgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaa 270  Q
    ||||||||||||||||||||||||  | |  ||||| |||||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  28619934 gtgaatttttcgttcctatttaacagtttttttttggtattttaagggtacgatttgtcaattacaccctttgtcaattactcttatctttttcaataaa 28620033  T
Q  271 a 271  Q
    |    
T  28620034 a 28620034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 190 - 302
Target Start/End: Complemental strand, 36246408 - 36246296
Alignment:
Q  190 atttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatat 289  Q
    ||||||||  |||||||| ||||||| |||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||  || |||| | |    
T  36246408 atttaactaccgttttgagattttaagggtacgatttgtcacttataccctttctcaattactcttatctttttcaataaaactaatgaatactatctgt 36246309  T
Q  290 ttgaaaaactaaa 302  Q
    ||| |||||||||    
T  36246308 ttggaaaactaaa 36246296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 294
Target Start/End: Complemental strand, 13220174 - 13220055
Alignment:
Q  175 gaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaacta 274  Q
    |||||||||||| |||||||| |||| ||||   ||||||||  |||||||||| ||||||| | |||||||| |||| ||| |||||| ||||||||||    
T  13220174 gaatttttcgtttctatttaattgtcttttttgcattttaaaaatatgatttgttaattatatcttttgtcaactacttttatcttttttaataaaacta 13220075  T
Q  275 attcatgctatatatttgaa 294  Q
    ||||||||||| ||||||||    
T  13220074 attcatgctatctatttgaa 13220055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 252
Target Start/End: Original strand, 37269395 - 37269474
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattact 252  Q
    |||||||||| |||||||||||||||||||||||||||||||| | || ||||  |||||||||||||||||||||||||    
T  37269395 gtgaattttttgttcctatttaactgtcgttttgatattttaaggatacgattgatcaattataccctttgtcaattact 37269474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 1583405 - 1583534
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaagg-tatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaa 271  Q
    |||| ||||| ||| ||||||||||||  |||||  ||||| |||| || |||||||||||||||| |||||||||| ||||||  ||||||||||||||    
T  1583405 gtgactttttggtttctatttaactgtttttttgggatttttaagggtacgatttgtcaattatactctttgtcaat-actcttgtctttttcaataaaa 1583503  T
Q  272 ctaattcatgctatatatttgaaaaactaaa 302  Q
    |||||| ||||||| |||||| |||||||||    
T  1583504 ctaattaatgctatctatttggaaaactaaa 1583534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 198 - 296
Target Start/End: Original strand, 19924860 - 19924957
Alignment:
Q  198 gtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaa 296  Q
    ||||||||  |||||||| |||| ||||||| | ||||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||    
T  19924860 gtcgttttagtattttaagggtacgatttgt-agttataccatttgtcaattattcttatctttttcaataaaactaattcatgttatatatttgaaaa 19924957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 198 - 296
Target Start/End: Original strand, 19931808 - 19931906
Alignment:
Q  198 gtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaa 296  Q
    ||||||||  |||||||| | || ||||||||| ||||||  ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||    
T  19931808 gtcgttttagtattttaaggctacgatttgtcagttatactatttgtcaattattcttatctttttcaataaaactaattcatgttatatatttgaaaa 19931906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 42674229 - 42674141
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttaccttt 261  Q
    |||||||||| ||| ||||||||||||| ||||| |||||||| ||||  |||||||||| ||||||||||||||||||||||| ||||    
T  42674229 gtgaattttttgtttctatttaactgtctttttggtattttaagggtacaatttgtcaatgataccctttgtcaattactcttatcttt 42674141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 302
Target Start/End: Complemental strand, 39940434 - 39940319
Alignment:
Q  188 ctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactctta-cctttttcaataaaactaattcatgctata 286  Q
    ||||||||||||| |||| |||||||||| |||  |||| ||||||||||| ||||||||| |||||||   ||||| ||||||||||||| |||||||     
T  39940434 ctatttaactgtctttttaatattttaaaagtacaatttatcaattataccttttgtcaataactcttatatttttttaataaaactaattaatgctatc 39940335  T
Q  287 tatttgaaaaactaaa 302  Q
    |||||| | |||||||    
T  39940334 tatttggataactaaa 39940319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 18413487 - 18413424
Alignment:
Q  178 tttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctt 241  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||| |||| ||||||||||||||    
T  18413487 tttttcgttcctatttaactgtctttttggtattttaagggtataatttatcaattataccctt 18413424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 14654941 - 14655003
Alignment:
Q  240 tttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||||| |||||  ||||||||||||||||||| |||||||||||||| |||||||||    
T  14654941 tttgtcaattattcttatatttttcaataaaactaattaatgctatatatttggaaaactaaa 14655003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 17591631 - 17591696
Alignment:
Q  211 tttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaat 276  Q
    ||||| |||||||||||||| ||||||| ||| | ||||||||||| |||||||||||||||||||    
T  17591631 tttaagggtatgatttgtcatttataccatttcttaattactcttatctttttcaataaaactaat 17591696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 185 - 294
Target Start/End: Original strand, 36706986 - 36707100
Alignment:
Q  185 ttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattact----cttac-ctttttcaataaaactaattca 279  Q
    |||||||||||||||||||||||| |||||| | ||| |||||||||||||||| ||| | | |||||    ||||| ||||||||||||| |||||| |    
T  36706986 ttcctatttaactgtcgttttgatcttttaaggatataatttgtcaattataccattttttatttacttacacttactctttttcaataaatctaattaa 36707085  T
Q  280 tgctatatatttgaa 294  Q
    || ||| ||||||||    
T  36707086 tgatatgtatttgaa 36707100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 19922151 - 19922207
Alignment:
Q  240 tttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaa 296  Q
    ||||||| ||| ||||| |||||||||||||||||||||||| ||||||||||||||    
T  19922151 tttgtcagttattcttatctttttcaataaaactaattcatgttatatatttgaaaa 19922207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 14654893 - 14654952
Alignment:
Q  176 aatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattat 235  Q
    |||||||||||| ||||||| ||||| |||| |||||||| |||||||||||||||||||    
T  14654893 aatttttcgttcttatttaattgtcgctttggtattttaagggtatgatttgtcaattat 14654952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 11825595 - 11825533
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattat 235  Q
    |||||||||| |||| |||||||||||||||||  |||||||| |||| ||||||||||||||    
T  11825595 gtgaattttttgttcttatttaactgtcgttttcgtattttaagggtacgatttgtcaattat 11825533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 277
Target Start/End: Original strand, 14543720 - 14543797
Alignment:
Q  200 cgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttac-ctttttcaataaaactaatt 277  Q
    |||||||||||||||| ||||  |||| ||||||||||||||| |||||||||| ||| | ||||||||||||||||||    
T  14543720 cgttttgatattttaa-ggtacaatttttcaattataccctttctcaattactcatactcattttcaataaaactaatt 14543797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 249607 - 249553
Alignment:
Q  248 ttactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||| || |||||| ||||||||||||| |||||||||||||| |||||||||    
T  249607 ttactcctatcttttttaataaaactaattaatgctatatatttggaaaactaaa 249553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 291
Target Start/End: Original strand, 14967069 - 14967176
Alignment:
Q  190 atttaactgtcgttttgatattttaaaggtatgatttgtcaattatac-cctttgtcaattactc----ttac-ctttttcaataaaactaattcatgct 283  Q
    |||||||||||||||||||| ||||||| ||  |||||||||||||||   ||| ||||||||||    |||| |||||||||||||||||||| ||| |    
T  14967069 atttaactgtcgttttgatagtttaaagatacaatttgtcaattatacttttttctcaattactcttttttactctttttcaataaaactaattaatgtt 14967168  T
Q  284 atatattt 291  Q
    || |||||    
T  14967169 atctattt 14967176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 1589952 - 1589989
Alignment:
Q  15 aaaatagcatttttatgttcaaaacagtttaccttttt 52  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  1589952 aaaatagcatttttatggtcaaaacagtttaccttttt 1589989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 9948916 - 9948839
Alignment:
Q  176 aatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactc 253  Q
    ||||||| ||| ||||||||||| |||||||||| || || ||||  |||||||||||||||  ||| ||||||||||    
T  9948916 aattttttgtttctatttaactgacgttttgataattcaagggtagaatttgtcaattatactatttctcaattactc 9948839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 39585881 - 39585777
Alignment:
Q  189 tatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttt--tcaataaaactaattcatgctata 286  Q
    |||||||| ||  ||||| |||||||| | || |||||||| |||| | ||||||||||||  ||||| |||||  ||||||||||||||| |||||||     
T  39585881 tatttaaccgtttttttggtattttaaggatacgatttgtcgattacatcctttgtcaattgttcttatcttttattcaataaaactaattaatgctatc 39585782  T
Q  287 tattt 291  Q
    |||||    
T  39585781 tattt 39585777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 302
Target Start/End: Complemental strand, 36194105 - 36194033
Alignment:
Q  230 aattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| ||| |||| |||||||| |||||| ||| ||||||||| ||| ||| ||||||||||| ||||    
T  36194105 aattataccatttttcaagtactcttatctttttgaatcaaactaattaatgttatctatttgaaaaattaaa 36194033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 39584798 - 39584898
Alignment:
Q  202 ttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaa 301  Q
    ||||| |||||||||| ||| |||||||||||| || |||| | | ||| ||||| ||||||| ||||||| |||| ||  ||| |||||| ||||||||    
T  39584798 ttttgttattttaaagatataatttgtcaattaaactctttcttagttattcttatctttttcgataaaaccaattaatcttatgtatttggaaaactaa 39584897  T
Q  302 a 302  Q
    |    
T  39584898 a 39584898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 10704399 - 10704458
Alignment:
Q  178 tttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattatac 237  Q
    ||||| ||| |||||||||||| |||||| || ||||| |||||||||||||||| ||||    
T  10704399 ttttttgtttctatttaactgttgttttggtagtttaagggtatgatttgtcaatgatac 10704458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 11825498 - 11825447
Alignment:
Q  248 ttactcttacctttttcaataaaactaattcatgctatatatttgaaaaact 299  Q
    ||||||||| |||||||||||||||||||| ||| | |||||||| ||||||    
T  11825498 ttactcttatctttttcaataaaactaattaatgttgtatatttggaaaact 11825447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 43346737 - 43346683
Alignment:
Q  248 ttactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| |||||| ||||||||||| | |||||||||||||  |||||||||    
T  43346737 ttactcttatcttttttaataaaactaagtaatgctatatatttagaaaactaaa 43346683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 1437111 - 1437058
Alignment:
Q  189 tatttaactgtcgttttgatattttaaaggtatgatttgtcaattatacccttt 242  Q
    |||||||||||||||||||||  ||||| |||  ||||||||||||||| ||||    
T  1437111 tatttaactgtcgttttgatagcttaaaagtacaatttgtcaattatacacttt 1437058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 43346822 - 43346761
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaatta 234  Q
    |||||||||| |||||||||||| | |||||||  ||||||||  ||| |||||||||||||    
T  43346822 gtgaattttttgttcctatttaaatctcgttttagtattttaagagtacgatttgtcaatta 43346761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 176 - 302
Target Start/End: Complemental strand, 7578342 - 7578216
Alignment:
Q  176 aatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaa 275  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||  |||||||||||||||||    
T  7578342 aatttttcgttcctatttaactgtcgttttgatattttaagggtatgatctgtcaattataccctttgtcaattattcttatatttttcaataaaactaa 7578243  T
Q  276 ttcatgctatatatttgaaaaactaaa 302  Q
    || ||||||||||||| ||||| ||||    
T  7578242 ttaatgctatatatttaaaaaattaaa 7578216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 169 - 302
Target Start/End: Original strand, 25496592 - 25496725
Alignment:
Q  169 tagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaata 268  Q
    ||||||||||||||| |||||||||||||||  ||||| |||||||| |||||||||| ||||||||||||||||| ||||||| ||| |||||||||||    
T  25496592 tagtgtgaatttttcattcctatttaactgtttttttgctattttaagggtatgatttatcaattataccctttgttaattacttttatctttttcaata 25496691  T
Q  269 aaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| ||||||| ||||||||||||||||    
T  25496692 aaactaattaatgctatctatttgaaaaactaaa 25496725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 32233575 - 32233685
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||||||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32233575 gtgaatttttcgttcctatttaactgtctttttggtattttaagggtgtgatttgtcaattataccctttgtcaattactcttatctttttcaataaaac 32233674  T
Q  273 taattcatgct 283  Q
    ||||| |||||    
T  32233675 taattaatgct 32233685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 9455181 - 9455310
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgt-caattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| | |||||||||| ||||||||||| |||||  ||||||||||||||    
T  9455181 tgaattttttgttcctatttaactgtcgttttggtattttaaatgtatgattttttcaattataccatttgtcaattattcttatatttttcaataaaac 9455280  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||||||||||||||||||| ||||    
T  9455281 taattaatgctatatatttgaaaaaataaa 9455310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 177 - 302
Target Start/End: Complemental strand, 16599511 - 16599386
Alignment:
Q  177 atttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaat 276  Q
    |||| |||||||||||||||||| |||||  |||||||||||||| |||||||| ||||||| ||| ||||||||||||| |||||||||||||||||||    
T  16599511 atttatcgttcctatttaactgttgttttagtattttaaaggtataatttgtcagttataccatttatcaattactcttatctttttcaataaaactaat 16599412  T
Q  277 tcatgctatatatttgaaaaactaaa 302  Q
    | ||| |||||||||| |||||||||    
T  16599411 taatgatatatatttgtaaaactaaa 16599386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 169 - 302
Target Start/End: Original strand, 25400413 - 25400546
Alignment:
Q  169 tagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaata 268  Q
    ||||||||||||||| ||||||||||||| |  ||||| |||||||| |||||||||| ||||||||||||||||| ||||||| ||| | |||||||||    
T  25400413 tagtgtgaatttttcattcctatttaactatttttttgctattttaagggtatgatttatcaattataccctttgttaattacttttatccttttcaata 25400512  T
Q  269 aaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| ||||||| |||||| |||||||||    
T  25400513 aaactaattaatgctatctatttggaaaactaaa 25400546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 34146130 - 34146259
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||| ||||| |||||| ||||| |||||||| |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  34146130 gtgaatttttcgttcttatttgactgtctttttggtattttaagggtacgatttgtcaattatactctttgtcaattactcttatctttttcaataaaac 34146229  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||| | | |||||| |||||||||    
T  34146230 taattaatgatgtctatttggaaaactaaa 34146259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 174 - 302
Target Start/End: Complemental strand, 3443866 - 3443738
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaact 273  Q
    |||||||||| ||||||||||| |||||||||| |||||||| |||||| |||||||||||||||| ||| |||||  |||||  ||||||||| |||||    
T  3443866 tgaatttttcattcctatttaattgtcgttttggtattttaagggtatgttttgtcaattatacccgttgacaattgttcttatttttttcaatcaaact 3443767  T
Q  274 aattcatgctatatatttgaaaaactaaa 302  Q
    |||| ||||||||||||||||||||||||    
T  3443766 aattaatgctatatatttgaaaaactaaa 3443738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 1359058 - 1358944
Alignment:
Q  163 tcgtcctagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttt 262  Q
    |||| |||||| | |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| | |||||    
T  1359058 tcgttctagtgcggatttttcgttcctacttaactgtcgttttgatattttaagggtatgatttgtcaattatgccctttatcaattactctaatctttt 1358959  T
Q  263 tcaataaaactaatt 277  Q
    ||| |||||||||||    
T  1358958 tcattaaaactaatt 1358944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 4418527 - 4418645
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgc 282  Q
    ||||| |||||||||||||||||| |||||| | ||||||||||||||||||||| ||||||||||||| || | |||||| ||||||||||||| ||||    
T  4418527 cgttcatatttaactgtcgttttggtattttgagggtatgatttgtcaattatactctttgtcaattaccctcatcttttt-aataaaactaattaatgc 4418625  T
Q  283 tatatatttgaaaaactaaa 302  Q
    |||||||||| |||||||||    
T  4418626 tatatatttggaaaactaaa 4418645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 183 - 299
Target Start/End: Original strand, 14896586 - 14896702
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgc 282  Q
    |||||||||||||||||| ||||| |||||||| |  |||||||||||| |||| | ||||||||||||||||| |||||||||||||||||||| |||     
T  14896586 cgttcctatttaactgtcattttggtattttaaggtgatgatttgtcaaatatatcatttgtcaattactcttatctttttcaataaaactaattaatgt 14896685  T
Q  283 tatatatttgaaaaact 299  Q
    ||||||||| |||||||    
T  14896686 tatatatttaaaaaact 14896702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 185 - 302
Target Start/End: Complemental strand, 1530719 - 1530603
Alignment:
Q  185 ttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgcta 284  Q
    |||| ||||||||||| ||||| |||||||| |||| ||||||||||||||||  |||||||||||||||||  ||||||||||||||| ||| ||||||    
T  1530719 ttccaatttaactgtc-ttttggtattttaagggtacgatttgtcaattatacattttgtcaattactcttatttttttcaataaaactgattaatgcta 1530621  T
Q  285 tatatttgaaaaactaaa 302  Q
    | |||||||||| |||||    
T  1530620 tctatttgaaaacctaaa 1530603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 302
Target Start/End: Original strand, 27231723 - 27231849
Alignment:
Q  175 gaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaacta 274  Q
    |||||||||||| |||||||| |||| ||| | | ||||||||||| ||||| |||||||||| |||||| ||||| |||||  ||||||||||||||||    
T  27231723 gaatttttcgttactatttaattgtc-tttgggtgttttaaaggtacgatttatcaattatactctttgttaattattcttatttttttcaataaaacta 27231821  T
Q  275 attcatgctatatatttgaaaaactaaa 302  Q
    ||| ||||||| |||||| |||||||||    
T  27231822 attaatgctatctatttggaaaactaaa 27231849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 40557157 - 40557286
Alignment:
Q  172 tgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaa 271  Q
    |||||||||  | |||||||||||| ||| |||||||||||||| | ||  |||| |||||||||||||||||  |||||||||| |||||||||| |||    
T  40557157 tgtgaatttagctttcctatttaaccgtcattttgatattttaaggttacaatttatcaattataccctttgttgattactcttatctttttcaat-aaa 40557255  T
Q  272 ctaattcatgctatatatttgaaaaactaaa 302  Q
    |||||| ||| |||| |||||||||||||||    
T  40557256 ctaattaatgttataaatttgaaaaactaaa 40557286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 41411602 - 41411473
Alignment:
Q  172 tgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaa 271  Q
    |||||||||  |||||||||||||| ||| |||||||||||||| | ||  |||| |||||||||||||||||  |||||||||| ||||||||| ||||    
T  41411602 tgtgaatttagcgttcctatttaaccgtcattttgatattttaaggatacaatttatcaattataccctttgttgattactcttatctttttcaa-aaaa 41411504  T
Q  272 ctaattcatgctatatatttgaaaaactaaa 302  Q
    |||||| | | |||| |||||||||||||||    
T  41411503 ctaattaaagttataaatttgaaaaactaaa 41411473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 30888002 - 30887899
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||||||||||| |||  ||||| | |||||| ||||  |||||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  30888002 gtgaatttttcgttcctatttaagtgtatttttggtgttttaagggtagaatttgtcaattata-cctttgtcaattactcttatcttttttaataaaac 30887904  T
Q  273 taatt 277  Q
    |||||    
T  30887903 taatt 30887899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 3741557 - 3741647
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttc 264  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||||| |||||| || |||||||    
T  3741557 gtgaattttttgttcctatttaactgtcgttttggtattttaaa-gtacgatttgtcaattataccatttgtcagttactcgtatctttttc 3741647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 302
Target Start/End: Complemental strand, 7695416 - 7695303
Alignment:
Q  189 tatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatata 288  Q
    |||||||||  | ||||| |||||||| |||| ||||||||||||||| | ||| | ||||||||||| ||||||||||||||||| || ||| ||| ||    
T  7695416 tatttaactaactttttggtattttaagggtacgatttgtcaattatatcattttttaattactcttatctttttcaataaaactagttaatgttatcta 7695317  T
Q  289 tttgaaaaactaaa 302  Q
    ||||||||||||||    
T  7695316 tttgaaaaactaaa 7695303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 29316034 - 29315954
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactc 253  Q
    ||||||||||  |||||||||||||||||||||  ||||||||  ||| ||||| ||||||||||||||||||||||||||    
T  29316034 gtgaattttttattcctatttaactgtcgttttagtattttaagagtacgatttttcaattataccctttgtcaattactc 29315954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 44666310 - 44666218
Alignment:
Q  185 ttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    ||||||| ||| ||||| |||||||||||||  | ||||||| ||| ||||||||||| |||||| |||||| ||||||||||||||||||||    
T  44666310 ttcctatataattgtcgatttgatattttaagagcatgatttctcacttataccctttctcaatttctcttatctttttcaataaaactaatt 44666218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 2743059 - 2742997
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattat 235  Q
    ||||||||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||    
T  2743059 gtgaatttttcgttcctatttaactgttgtttttgtattttaagggtatgatttgtcaattat 2742997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 16393667 - 16393728
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaatta 234  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||| |||||||||||||    
T  16393667 gtgaatttttcgttcctatttaactgtcttttttgtattttaaaggtacgatttgtcaatta 16393728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 34038858 - 34038917
Alignment:
Q  177 atttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattata 236  Q
    |||||||||||||||||||||||||||||  |||||||| || |||||||||||||||||    
T  34038858 atttttcgttcctatttaactgtcgttttagtattttaagggcatgatttgtcaattata 34038917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 297
Target Start/End: Complemental strand, 43026814 - 43026703
Alignment:
Q  187 cctatttaactgtcgttttgatattttaaaggtatgatttgtcaattatac-cctttgtcaattactcttacctttttcaataaaactaattcatgctat 285  Q
    |||||||||||||||||||  |||||||||| || ||||||||||||| ||   ||| ||||||| |||||  ||||||||||||| ||||| ||| ||     
T  43026814 cctatttaactgtcgttttagtattttaaagttacgatttgtcaattacacgtttttatcaattattcttatatttttcaataaaattaattaatgttac 43026715  T
Q  286 atatttgaaaaa 297  Q
    ||||||||||||    
T  43026714 atatttgaaaaa 43026703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 45083135 - 45083036
Alignment:
Q  202 ttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaa 301  Q
    ||||| |||||||||| |||||||||| |||||||  |||  | ||||||||||| |||||||||||||||||||| |||  || |||||| ||||||||    
T  45083135 ttttggtattttaaagatatgatttgttaattatattcttgtttaattactcttatctttttcaataaaactaattaatgtaatgtatttggaaaactaa 45083036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 16393718 - 16393780
Alignment:
Q  240 tttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||| |||||| |||||||||    
T  16393718 tttgtcaattacttttagctttttcaataaaactaattaatgctatctatttggaaaactaaa 16393780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 302
Target Start/End: Complemental strand, 39628384 - 39628298
Alignment:
Q  217 ggtatgatttgtcaattataccctttg-tcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||| ||||||||||||||||| |||  |||||||||||||  ||||||||||||||||||| ||| ||| |||||| |||||||||    
T  39628384 ggtacgatttgtcaattatacctttttatcaattactcttatttttttcaataaaactaattaatgttatctatttggaaaactaaa 39628298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 302
Target Start/End: Complemental strand, 39637934 - 39637848
Alignment:
Q  217 ggtatgatttgtcaattataccctttg-tcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||| ||||||||||||||||| |||  |||||||||||||  ||||||||||||||||||| ||| ||| |||||| |||||||||    
T  39637934 ggtacgatttgtcaattatacctttttatcaattactcttatttttttcaataaaactaattaatgttatctatttggaaaactaaa 39637848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 36682501 - 36682566
Alignment:
Q  185 ttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaatta 250  Q
    |||||||||||||||||||||  ||||||||| || |||||||||||||||| | |||||||||||    
T  36682501 ttcctatttaactgtcgttttagtattttaaaagtgtgatttgtcaattatatcatttgtcaatta 36682566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 3741656 - 3741711
Alignment:
Q  247 attactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||    
T  3741656 attactcttatcttttttaataaaactaattaatgctatatatttggaaaactaaa 3741711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 5870769 - 5870831
Alignment:
Q  240 tttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||||| ||||| | |||||||||||||||||| ||| ||| ||||||||||||||||    
T  5870769 tttgtcaattattcttatcattttcaataaaactaattaatgttatctatttgaaaaactaaa 5870831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 1256821 - 1256777
Alignment:
Q  218 gtatgatttgtcaattataccctttgtcaattactcttacctttt 262  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  1256821 gtatgatttgtcaattatgccctttgtcaattactcttatctttt 1256777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 38401512 - 38401631
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttt--tgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaa 271  Q
    ||||||||||||| |||||||| |||  |||  |  |||||||| | ||| ||||||||||||||   ||||||||||||||||| |||||| |||||||    
T  38401512 tgaatttttcgtttctatttaaatgttttttaattttattttaaggatataatttgtcaattatattatttgtcaattactcttatcttttttaataaaa 38401611  T
Q  272 ctaattcatgctatatattt 291  Q
     ||||| ||| ||| |||||    
T  38401612 ttaattaatgttatttattt 38401631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 39140483 - 39140397
Alignment:
Q  184 gttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaacta 274  Q
    |||| |||||||||||||||| |||||||||| |||||   ||| |||| |||| |||| ||||||| ||||| |||||||||||||||||    
T  39140483 gttcatatttaactgtcgttt-gatattttaagggtat---ttgccaataatactctttctcaattaatcttatctttttcaataaaacta 39140397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 2742989 - 2742946
Alignment:
Q  259 tttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  2742989 tttttcaataaaactaattaatgctatatatttgaaaaattaaa 2742946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 273
Target Start/End: Complemental strand, 12687530 - 12687447
Alignment:
Q  190 atttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaact 273  Q
    |||||||| |||||||| |||||||||||||| ||||||| |||||| ||||| | | |||  | || ||||||||||||||||    
T  12687530 atttaactatcgttttgttattttaaaggtataatttgtctattatatcctttcttagttatgcctatctttttcaataaaact 12687447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 29315934 - 29315879
Alignment:
Q  247 attactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||||| |||||| ||||||||||| | |||||||||||||| |||||||||    
T  29315934 attactcttatcttttttaataaaactaagtaatgctatatatttggaaaactaaa 29315879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 36682579 - 36682633
Alignment:
Q  247 attactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||||| |||||| ||||||||||||| ||| ||||||||||||||||||||    
T  36682579 attactcttatcttttttaataaaactaattaatg-tatatatttgaaaaactaaa 36682633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 38457289 - 38457347
Alignment:
Q  244 tcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||| | ||| |||||||||||||||||||| ||||||| |||||| |||||||||    
T  38457289 tcaattatttttatctttttcaataaaactaattaatgctatctatttggaaaactaaa 38457347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 4419012 - 4418918
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactctta-cctttttcaataaaactaatt 277  Q
    |||| ||||||||||||| |||| |||| || |  |||| |||||||| | ||| |||||||||||||||||||   |||||||||||||||||||    
T  4419012 cgtttctatttaactgtcatttt-atatctttagagtataatttgtcagtcatatcctttgtcaattactcttattttttttcaataaaactaatt 4418918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 7e-46; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 38434377 - 38434248
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||| ||||||| |||||  ||||||||||||||    
T  38434377 gtgaatttttcgttcctatttaactgtcgttttggtattttaaaggtataatttatcaattataccctttatcaattattcttatatttttcaataaaac 38434278  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    |||||  |||||||||||||||||||||||    
T  38434277 taattagtgctatatatttgaaaaactaaa 38434248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 50720846 - 50720971
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||| ||||||||||||||||||||||| ||||| | |||||||| |||||| ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  50720846 gtgattttttcgttcctatttaactgtctttttggtgttttaaagatatgatgtgtcaattataccatttgtcaattactcttatctttttcaataaaac 50720945  T
Q  273 taattcatgctatatatttgaaaaac 298  Q
    ||||| ||||||| ||||||||||||    
T  50720946 taattaatgctatctatttgaaaaac 50720971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 45635594 - 45635465
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||||||||||| || ||||||| |||||||| |||| ||||| ||||||||||| |||||||||||||||||  ||||||||||||||    
T  45635594 gtgaatttttcgttcctatttaattgccgttttggtattttaagggtacgatttatcaattataccatttgtcaattactcttatatttttcaataaaac 45635495  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||| |||||||||| |||||||||    
T  45635494 taattaatgttatatatttggaaaactaaa 45635465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 45666247 - 45666375
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaact 273  Q
    |||||||||||||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  45666247 tgaatttttcgttcatatttaactgtctttttggtattttaaaggtacgatttgtcaattataccctttgtcaattacttttatctttttcaataaaact 45666346  T
Q  274 aattcatgctatatatttgaaaaactaaa 302  Q
     ||| ||  ||| |||||| |||| ||||    
T  45666347 tattaataatatctatttggaaaattaaa 45666375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 179 - 302
Target Start/End: Complemental strand, 9089750 - 9089627
Alignment:
Q  179 ttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattc 278  Q
    |||||||||||||||||||||  ||||| | |||||| |||| ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||     
T  9089750 ttttcgttcctatttaactgtttttttggtgttttaagggtacgatttatcaattgtaccctttgtcaattactcttatctttttcaataaaactaatta 9089651  T
Q  279 atgctatatatttgaaaaactaaa 302  Q
    ||||||| ||||||||||| ||||    
T  9089650 atgctatctatttgaaaaattaaa 9089627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 24074253 - 24074131
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||||||||||| |||| ||||  |||||||| | ||  |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24074253 gtgaatttttcgttcctatttaattgtctttttagtattttaaggatactatttgtcaattataccctttgtcaattactcttaactttttcaataaaac 24074154  T
Q  273 taattcatgctatatatttgaaa 295  Q
    ||||| ||| ||| |||||||||    
T  24074153 taattaatgttatctatttgaaa 24074131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 19443711 - 19443582
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||||||||||||||||| ||||| |||||||| | || ||||||||||||||||||||||||||||||| ||| |||||| | ||||||    
T  19443711 gtgaatttttcgttcctatttaactgtctttttggtattttaaggatacgatttgtcaattataccctttgtcaattacttttatcttttttagtaaaac 19443612  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||| | || |||| ||||||||||| ||||    
T  19443611 taagtaatactatctatttgaaaaattaaa 19443582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 23529471 - 23529591
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactctta-cctttttcaataaaactaattcatg 281  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||| ||| ||||||||| ||| | ||||||||||||||||||| |||    
T  23529471 cgttcctatttaactgttgttttgatattttaagggtacgatttgtcaattataccttttctcaattacttttatcttttttcaataaaactaattaatg 23529570  T
Q  282 ctatatatttgaaaaactaaa 302  Q
    |||| |||||| |||||||||    
T  23529571 ctatttatttggaaaactaaa 23529591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 24538439 - 24538317
Alignment:
Q  180 tttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattca 279  Q
    ||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||| | ||||||||||||| |||||  |||||||||||||||||||      
T  24538439 tttcgtttctatttaactgtcattttggtattttaagggtatgatttgtcaattacaacctttgtcaattattcttatatttttcaataaaactaattag 24538340  T
Q  280 tgctatatatttgaaaaactaaa 302  Q
    || |||||||||| |||||||||    
T  24538339 tgttatatatttggaaaactaaa 24538317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 38045359 - 38045484
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||||||||||||| ||| ||||| |||||||| |||| ||||| ||||||||||||||| |||||||||||||  | |||||||||||     
T  38045359 gtgaatttttcgttcctatttaacagtctttttggtattttaagggtacgatttatcaattataccctttatcaattactcttatatctttcaataaaag 38045458  T
Q  273 taattcatgctatatatttgaaaaac 298  Q
    ||||| ||||||| |||||| |||||    
T  38045459 taattaatgctatctatttggaaaac 38045484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 38840558 - 38840429
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||| ||||||||||||||||  |||| ||||||||| ||||  |||||||||||||| |||||| |||||||| ||| |||||| | ||||||    
T  38840558 gtgaattttttgttcctatttaactgtttttttaatattttaagggtagaatttgtcaattatatcctttgacaattacttttatcttttttagtaaaac 38840459  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||||||| ||||||||||||||||    
T  38840458 taattaatgctatctatttgaaaaactaaa 38840429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 54982896 - 54982767
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||| ||||||||| || ||||| ||||||| |||||  ||||||||||||||| |||||||||||||| ||| | |||||||||||||    
T  54982896 gtgaatttttcgttcatatttaactatctttttggtattttataggtacaatttgtcaattatactctttgtcaattacttttatccttttcaataaaac 54982797  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||| | ||||||| |||||| |||||||||    
T  54982796 taactaatgctatctatttggaaaactaaa 54982767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 6949044 - 6949150
Alignment:
Q  179 ttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattc 278  Q
    ||||||||| |||||||||||| ||||| ||||||||  | | ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||     
T  6949044 ttttcgttcttatttaactgtctttttggtattttaagtgcacgatttgtcaattataccatttgtcaattactcttatctttttcaataaaactaatta 6949143  T
Q  279 atgctat 285  Q
    |||||||    
T  6949144 atgctat 6949150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 46195693 - 46195822
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||| ||||||||||||||||| ||||| | ||| || ||||  |||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  46195693 gtgaattttttgttcctatttaactgtctttttggtttttgaagggtacaatttgtcaattataccctttgtcaattacttttatctttttcagtaaaac 46195792  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||| |||  |||||||||| ||||    
T  46195793 taattaatgttatcaatttgaaaaattaaa 46195822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 37210108 - 37209997
Alignment:
Q  191 tttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatt 290  Q
    ||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||||||  ||||||| ||||    
T  37210108 tttaactctctttttggtattttaagggtataatttgtcaattataccctttgtcaattatttttatctttttcaataaaactaatcaatgctatctatt 37210009  T
Q  291 tgaaaaactaaa 302  Q
    || |||||||||    
T  37210008 tggaaaactaaa 37209997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 21342339 - 21342249
Alignment:
Q  185 ttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaa 275  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||||||| | ||||| ||||||||||| ||||||||||||||||||    
T  21342339 ttcctatttaactgtctttttgatattttaagggtatgatttatcaattatatcatttgttaattactcttatctttttcaataaaactaa 21342249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 30913477 - 30913608
Alignment:
Q  170 agtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataa 269  Q
    |||||||||||  |||| ||||||||| ||||||||||||||||||| ||| | ||||| ||||||||||||| ||||||||| |||  |||||||||||    
T  30913477 agtgtgaatttagcgtttctatttaacagtcgttttgatattttaaaagtacgttttgtgaattataccctttatcaattact-ttatgtttttcaataa 30913575  T
Q  270 aactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||| | | |||||||||  |||||||||    
T  30913576 aactaattaacgttatatatttcgaaaactaaa 30913608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 20782436 - 20782543
Alignment:
Q  194 aactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttga 293  Q
    |||||||||||||||||||||| ||||| |||| |||||||||| |||| |||||||||||||  ||||||||||||||||||  ||||||  ||||| |    
T  20782436 aactgtcgttttgatattttaagggtataatttttcaattatacactttctcaattactcttatatttttcaataaaactaataaatgctacctatttaa 20782535  T
Q  294 aaaactaa 301  Q
    ||||||||    
T  20782536 aaaactaa 20782543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 25490419 - 25490538
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgc 282  Q
    |||| |||||||||| ||| |||| |||||||| ||||  |||||| ||||||||| ||||||||||||||||| | |||||||||||| ||||| |||     
T  25490419 cgtttctatttaactatcgatttggtattttaagggtaaaatttgttaattataccatttgtcaattactcttatcattttcaataaaaataattaatgt 25490518  T
Q  283 tatatatttgaaaaactaaa 302  Q
    |||||||||| |||||||||    
T  25490519 tatatatttggaaaactaaa 25490538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 49299997 - 49299875
Alignment:
Q  179 ttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactctta-cctttttcaataaaactaatt 277  Q
    |||||||| ||||||||||||| ||||| |||||||| |||| ||||||||||||||||||||||| ||||||| |||   |||||||||| |||||||     
T  49299997 ttttcgtttctatttaactgtctttttgttattttaagggtaggatttgtcaattataccctttgttaattacttttattttttttcaatataactaatc 49299898  T
Q  278 catgctatatatttgaaaaacta 300  Q
     ||| ||| ||||||||||||||    
T  49299897 aatgttatctatttgaaaaacta 49299875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 17330775 - 17330843
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctt 241  Q
    |||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||||    
T  17330775 gtgaatttttcgttcctatttaactgtatttttggtattttaagggtatgatttgtcaattataccctt 17330843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 210 - 298
Target Start/End: Complemental strand, 37371509 - 37371422
Alignment:
Q  210 ttttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaac 298  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||||  ||||||||||||||| ||| ||| ||||||||||||||||    
T  37371509 ttttaagggtatgatttatcaattataccctttgtcaattattcttatatttttcaataaaact-attaatgatatatatttgaaaaac 37371422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 302
Target Start/End: Complemental strand, 21956605 - 21956491
Alignment:
Q  188 ctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatat 287  Q
    |||||||| | | |||||| |||||||| |||| ||||||||| ||||| | ||| |||| |||||||| |||||||||||||||||||| ||  ||  |    
T  21956605 ctatttaattattgttttggtattttaagggtacgatttgtcacttatatcttttctcaaatactcttatctttttcaataaaactaattaatattacct 21956506  T
Q  288 atttgaaaaactaaa 302  Q
    |||||||||||||||    
T  21956505 atttgaaaaactaaa 21956491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 208 - 302
Target Start/End: Complemental strand, 34032104 - 34032010
Alignment:
Q  208 tattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||| |||| ||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||| ||  ||| |||||  |||||||||    
T  34032104 tattttaagggtacgatttgtcaattataccctttgttaattagttttatctttttcaataaaactaattaatattatctatttagaaaactaaa 34032010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 287
Target Start/End: Complemental strand, 27650958 - 27650852
Alignment:
Q  184 gttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttac---ctttttcaataaaactaattcat 280  Q
    |||| ||||||||| |||||||||||||||| | ||| ||||| ||||||||| | |||||||||||||||||    | |||||||||||||||||| ||    
T  27650958 gttcatatttaactatcgttttgatattttagaagtacgatttatcaattatatcatttgtcaattactcttattatcattttcaataaaactaattaat 27650859  T
Q  281 gctatat 287  Q
    | |||||    
T  27650858 gttatat 27650852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 46196926 - 46196822
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactctta-cctttttcaataaaactaattcatg 281  Q
    |||| |||||||| ||||| |||  ||||||||| ||||||||||||||||| ||  |||||||||||||||||   ||||||||||||||||||| |||    
T  46196926 cgtttctatttaattgtcgctttagtattttaaaagtatgatttgtcaattacactatttgtcaattactcttatattttttcaataaaactaattaatg 46196827  T
Q  282 ctata 286  Q
     ||||    
T  46196826 ttata 46196822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 668195 - 668104
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttc 264  Q
    |||||||||| |||||||| |||||||| ||||  |||||||| || |  |||| |||||||||||||||||||||||||| || |||||||    
T  668195 gtgaattttttgttcctatctaactgtcttttttgtattttaagggcacaatttctcaattataccctttgtcaattactcatatctttttc 668104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 33889523 - 33889613
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttc 264  Q
    |||||||||| |||||||||||||||| |||||| |||||||| ||||  |||| |||||||||| |||| |||||||||| || |||||||    
T  33889523 gtgaattttttgttcctatttaactgttgttttggtattttaagggtacaattt-tcaattatactctttatcaattactcgtatctttttc 33889613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 38045048 - 38044987
Alignment:
Q  172 tgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaatt 233  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||| | ||||||||||||    
T  38045048 tgtgaatttttcgttcctatttaaccgtcttttcgatattttaaaggcacgatttgtcaatt 38044987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 2492863 - 2492919
Alignment:
Q  246 aattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||||    
T  2492863 aattactcttatcttttttaataaaactaattaatgctatctatttgaaaaactaaa 2492919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 298
Target Start/End: Complemental strand, 29961643 - 29961523
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttac-----ctttttcaataaaactaatt 277  Q
    ||||||||| |||||||| ||||| || | ||| | ||| ||||||||||||||  |||| ||||||||||||||     |||||||||||||||||||     
T  29961643 cgttcctatctaactgtcattttggtagtgtaaggatataatttgtcaattatattctttatcaattactcttacctcctctttttcaataaaactaata 29961544  T
Q  278 catgctatatatttgaaaaac 298  Q
     || |||| ||||||||||||    
T  29961543 aatactatctatttgaaaaac 29961523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 30912606 - 30912661
Alignment:
Q  197 tgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattact 252  Q
    |||||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||    
T  30912606 tgtcgttttggtattttaaatgtacgatttgtgaattataccctttgtcaattact 30912661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 33808885 - 33808944
Alignment:
Q  238 cctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaa 297  Q
    ||||||| |||||||||||| ||||||||||||| ||||| ||| |||||||||||||||    
T  33808885 cctttgttaattactcttacatttttcaataaaattaattaatgttatatatttgaaaaa 33808944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 33889622 - 33889677
Alignment:
Q  247 attactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||    
T  33889622 attactcttatcttttttaataaaactaattaatgctatatatttggaaaactaaa 33889677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 25493839 - 25493901
Alignment:
Q  240 tttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||| |||||||||||| |||||||||||||||||||| ||| ||| |||||| |||||||||    
T  25493839 tttgacaattactcttatctttttcaataaaactaattaatgttatctatttggaaaactaaa 25493901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 46016700 - 46016625
Alignment:
Q  202 ttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    |||||| |||||||| ||| |||||||| |||| | | ||||| ||||||||||| |||||||||| |||||||||    
T  46016700 ttttgaaattttaaaagtacgatttgtcgattacatcatttgttaattactcttatctttttcaatcaaactaatt 46016625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 668094 - 668040
Alignment:
Q  248 ttactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| |||||| ||||||||||||| ||| |||||||||| |||||||||    
T  668094 ttactcttatctttttaaataaaactaattaatgttatatatttggaaaactaaa 668040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 41502560 - 41502614
Alignment:
Q  248 ttactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| |||||| ||||||| ||||| ||| ||||||||||||||||||||    
T  41502560 ttactcttatcttttttaataaaattaattaatgttatatatttgaaaaactaaa 41502614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 23687135 - 23687200
Alignment:
Q  188 ctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactc 253  Q
    |||||||| | || |||||||| ||||||||||| ||||||||||||||| |||| ||| ||||||    
T  23687135 ctatttaagtatcattttgatagtttaaaggtataatttgtcaattatactctttctcatttactc 23687200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 28130455 - 28130535
Alignment:
Q  191 tttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaa 271  Q
    |||||||||| ||||  ||| |||||| |||||||||||||||||| | ||| | ||||||||||| | |||| |||||||    
T  28130455 tttaactgtccttttagtatcttaaagatatgatttgtcaattataacattttttaattactcttatcctttttaataaaa 28130535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 49263014 - 49263062
Alignment:
Q  244 tcaattactcttacctttttcaataaaactaattcatgctatatatttg 292  Q
    ||||||||||||| |||||||||||||||||||| ||| ||| ||||||    
T  49263014 tcaattactcttatctttttcaataaaactaattaatgatatctatttg 49263062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 277
Target Start/End: Original strand, 46250003 - 46250092
Alignment:
Q  188 ctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    |||||||| | || |||||  |||||||| ||| |||||||| |||| |   ||||| ||||||||||| |||||||||| |||||||||    
T  46250003 ctatttaaatatcattttggcattttaaaagtacgatttgtcgattacattatttgttaattactcttatctttttcaatcaaactaatt 46250092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 49262959 - 49263020
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaatta 234  Q
    |||||||||| ||||||||||||||||| ||||| || |||||   |||||||| |||||||    
T  49262959 gtgaattttttgttcctatttaactgtctttttggtaatttaagtatatgatttatcaatta 49263020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 53392596 - 53392629
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttg 206  Q
    |||||||||||||||||||||||||||| |||||    
T  53392596 gtgaatttttcgttcctatttaactgtctttttg 53392629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 7e-46; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 45646545 - 45646674
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  45646545 gtgaaattttcgttcctatttaactgtctttttggtattttaaaggtacgatttgtcaattataccctttgtcaattacttttttctttttcaataaaac 45646644  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||||||| ||||||||||||||||    
T  45646645 taattaatgctatctatttgaaaaactaaa 45646674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 25842074 - 25841945
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||||||||||| ||||||||| | |||||||| |||||||||||||||| ||||||||||||||||| |||||  ||||||||||||||    
T  25842074 gtgaatttttcgttcctatttatctgtcgtttcggtattttaagggtatgatttgtcaatcataccctttgtcaattaatcttatatttttcaataaaac 25841975  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| |||||||||||||| |||||||||    
T  25841974 taattaatgctatatatttggaaaactaaa 25841945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 169 - 297
Target Start/End: Complemental strand, 19234135 - 19234007
Alignment:
Q  169 tagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaata 268  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  19234135 tagtgtggatttttcgtttctatttaaccgtcgttttgatattttaaatgtatgatttttcaattataccctttgtcaattactcttatctttttcaata 19234036  T
Q  269 aaactaattcatgctatatatttgaaaaa 297  Q
    |||  |||| |||||||||||||| ||||    
T  19234035 aaaaaaattaatgctatatatttggaaaa 19234007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 178 - 301
Target Start/End: Original strand, 5493503 - 5493626
Alignment:
Q  178 tttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    ||||||||||||||||||||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5493503 tttttcgttcctatttaactgtctttttggtattttaagggtacgatttgtcaattataccctttgtcaattactcttatctttttcaataaaactaatt 5493602  T
Q  278 catgctatatatttgaaaaactaa 301  Q
     ||| | | |||||||||||||||    
T  5493603 aatgttgtctatttgaaaaactaa 5493626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 176 - 302
Target Start/End: Original strand, 2093724 - 2093850
Alignment:
Q  176 aatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaa 275  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| | ||| |||    
T  2093724 aattttttgttcctatttaactgtctttttgatattttaagggtatgatttgtcaattataccctttgtcaattacttttatctttttcagtcaaattaa 2093823  T
Q  276 ttcatgctatatatttgaaaaactaaa 302  Q
    || ||||||| ||||||||||||||||    
T  2093824 ttaatgctatctatttgaaaaactaaa 2093850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 176 - 301
Target Start/End: Complemental strand, 45760090 - 45759965
Alignment:
Q  176 aatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaa 275  Q
    ||||||||||||||||||||||||| ||| |   |||||| ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  45760090 aatttttcgttcctatttaactgtcttttagtgtttttaagggtatcatttgtcaattataccctttgtcaattactcttatctttctcaataaaactaa 45759991  T
Q  276 ttcatgctatatatttgaaaaactaa 301  Q
    || ||||||| |||||||||||||||    
T  45759990 ttaatgctatctatttgaaaaactaa 45759965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 163 - 302
Target Start/End: Original strand, 296369 - 296509
Alignment:
Q  163 tcgtcctagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactctta-ccttt 261  Q
    |||| |||||| | ||||| |||||||||||||||| | ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| | |||    
T  296369 tcgttctagtgcggattttacgttcctatttaactgacattttggtattttaagggtatgatttgtcagttataccctttgtcaattactcttatctttt 296468  T
Q  262 ttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||| |||||||||||| |||||||||||||| |||||||||    
T  296469 ttctataaaactaatttatgctatatatttggaaaactaaa 296509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 185 - 302
Target Start/End: Original strand, 9588702 - 9588819
Alignment:
Q  185 ttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgcta 284  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||  || ||||||||| |||||||||| ||| ||    
T  9588702 ttcctatttaactgtctttttgatattttaagggtatgatttatcaattataccctttgtcaattactaatatctttttcaaaaaaactaattaatgtta 9588801  T
Q  285 tatatttgaaaaactaaa 302  Q
    |||||||| |||||||||    
T  9588802 tatatttggaaaactaaa 9588819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 170 - 302
Target Start/End: Complemental strand, 25342521 - 25342389
Alignment:
Q  170 agtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataa 269  Q
    |||||| ||||  ||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||| ||| | |||| |||||    
T  25342521 agtgtggatttaacgttcttatttaaccgtcgttttggtattttaaaggtacgatttgtcaattatatcctttgtcaattacttttatcgtttttaataa 25342422  T
Q  270 aactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||| ||| |||||||||| |||||||||    
T  25342421 aactaattaatgttatatatttggaaaactaaa 25342389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 20841266 - 20841393
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||| |||| |||| |||||||||||| ||||| |||||||| |||| ||||||||||||||||| |||||||||||  ||||  ||||||||||||||    
T  20841266 gtgaaattttggttcttatttaactgtctttttggtattttaagggtacgatttgtcaattataccatttgtcaatta--cttatttttttcaataaaac 20841363  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||||||| ||||||||||||||||    
T  20841364 taattaatgctatctatttgaaaaactaaa 20841393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 189 - 302
Target Start/End: Complemental strand, 633408 - 633295
Alignment:
Q  189 tatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatata 288  Q
    |||||||||||||||||||| ||||||| ||| |||||| |||||| | ||||||||||||||||||| | |||||||||||||||||| ||| ||||||    
T  633408 tatttaactgtcgttttgatgttttaaatgtacgatttgacaattacatcctttgtcaattactcttatcattttcaataaaactaattaatgttatata 633309  T
Q  289 tttgaaaaactaaa 302  Q
    |||| |||||||||    
T  633308 tttggaaaactaaa 633295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 34668627 - 34668756
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||| |||||||||||||||||||||| ||||  ||||||||  ||| ||||||||||||||||||||||||||||||| ||   ||||| ||||||||    
T  34668627 gtgaaattttcgttcctatttaactgtctttttagtattttaagtgtacgatttgtcaattataccctttgtcaattacttttttttttttgaataaaac 34668726  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||||||| |||||| |||||||||    
T  34668727 taattaatgctatctatttggaaaactaaa 34668756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 184 - 291
Target Start/End: Original strand, 19578288 - 19578395
Alignment:
Q  184 gttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgct 283  Q
    |||||||||||| |||||||||  |||||||| |||| |||||||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| |    
T  19578288 gttcctatttaattgtcgttttagtattttaatggtacgatttgtcaattataccctttgtcaattgctcttgtctttttcaataaaactaattaatgtt 19578387  T
Q  284 atatattt 291  Q
    ||||||||    
T  19578388 atatattt 19578395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 173 - 292
Target Start/End: Complemental strand, 37031106 - 37030988
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||| ||||||||||| |||||| ||||| |||||||||  || |||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  37031106 gtgaattttccgttcctattttactgtctttttggtattttaaat-tacgatttgtcaattataccctttgccaattacttttagctttttcaataaaac 37031008  T
Q  273 taattcatgctatatatttg 292  Q
    ||||| ||||||| ||||||    
T  37031007 taattaatgctatctatttg 37030988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 2440781 - 2440662
Alignment:
Q  181 ttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcat 280  Q
    |||||| |||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||| | ||| | |||||||||||| ||||| ||    
T  2440781 ttcgtttctatttaagtgtc-ttttgatattttaaagatatgatttgtcaattataccctttgtcaattagttttatc-ttttcaataaaattaattaat 2440684  T
Q  281 gctatatatttgaaaaactaaa 302  Q
      ||||||||||||||||||||    
T  2440683 tatatatatttgaaaaactaaa 2440662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 21959822 - 21959700
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||| ||| ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||| |||||   |||||| ||||||    
T  21959822 gtgaatattttgttcctatttaactgtcgttttggtattttaagggtatgatttatcaattataccctttgtcaattattctta-tattttcattaaaac 21959724  T
Q  273 taattcatgctatatatttgaaaa 296  Q
    |||||  || ||||||||| ||||    
T  21959723 taattagtgttatatattttaaaa 21959700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 375697 - 375807
Alignment:
Q  179 ttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattc 278  Q
    |||||||| |||||||||  |||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||| |||||| ||||||| |||||     
T  375697 ttttcgtttctatttaaccatcgttttgatattttaaaagtatgatttgttaattatatcttttgtcaattactcttatcttttttaataaaattaatta 375796  T
Q  279 atgctatatat 289  Q
    ||||| |||||    
T  375797 atgctttatat 375807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 54675322 - 54675193
Alignment:
Q  172 tgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaa 271  Q
    |||||||||  |||||||||||||| ||| |||||||||||||| | ||  |||| |||||||||||||||||  |||||||||| ||||||||| ||||    
T  54675322 tgtgaatttagcgttcctatttaaccgtcattttgatattttaaggatacaatttatcaattataccctttgttgattactcttatctttttcaa-aaaa 54675224  T
Q  272 ctaattcatgctatatatttgaaaaactaaa 302  Q
    |||||| ||| |||| |||||||||||||||    
T  54675223 ctaattaatgttataaatttgaaaaactaaa 54675193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 27817363 - 27817490
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||| |||| ||||||||| ||||| ||||||||||||| | ||||||||||||||| ||||||||||| | ||| |||||||||||||||    
T  27817363 gtgaatttttcgt-cctaattaactgtctttttggtattttaaaggtacggtttgtcaattataccttttgtcaatta-ttttatctttttcaataaaac 27817460  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||  || || | ||||||||||||||||    
T  27817461 taatgaattctctctatttgaaaaactaaa 27817490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 27264065 - 27264170
Alignment:
Q  179 ttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattc 278  Q
    ||||||||  |||||||||||| ||||| ||| |||| | |||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||     
T  27264065 ttttcgtttatatttaactgtctttttg-tatcttaaggatatgatttgtcaattataccatttgtcaattactcttatctttttcaataaaattaatta 27264163  T
Q  279 atgctat 285  Q
    |||||||    
T  27264164 atgctat 27264170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 1272415 - 1272489
Alignment:
Q  217 ggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatattt 291  Q
    |||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  1272415 ggtatgatttttcaactataccctttgtcaattactcttatatttttcaataaaactaattaatgctatatattt 1272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 292
Target Start/End: Complemental strand, 15638635 - 15638508
Alignment:
Q  163 tcgtcctagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttt 262  Q
    |||| ||| |||| ||||||||||||||||||| ||| |||||| ||||||||  |||| |||||||||||||||||||| ||||||| ||||  |||||    
T  15638635 tcgttctaatgtggatttttcgttcctatttaaatgttgttttggtattttaagagtattatttgtcaattataccctttatcaattaatctt--ctttt 15638538  T
Q  263 tcaataaaactaattcatgctatatatttg 292  Q
    || |||||||| ||| ||| | ||||||||    
T  15638537 tccataaaacttattaatgttttatatttg 15638508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 7259829 - 7259767
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattat 235  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  7259829 gtgaattttttgttcctatttaaccgtcgttttgatattttaagggtatgatttgtcaattat 7259767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 302
Target Start/End: Complemental strand, 19187789 - 19187676
Alignment:
Q  189 tatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatata 288  Q
    ||||||| |||||||||  ||||||||  |||| |||||| |||||||| || |||| ||||| ||||  ||||||||||||||||||| ||| ||||||    
T  19187789 tatttaattgtcgttttagtattttaagtgtataatttgtaaattatactctgtgtcgattacacttatttttttcaataaaactaattaatgatatata 19187690  T
Q  289 tttgaaaaactaaa 302  Q
    ||||||||| ||||    
T  19187689 tttgaaaaattaaa 19187676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 285
Target Start/End: Original strand, 1405182 - 1405284
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgc 282  Q
    ||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||| ||||||||||||||| |  ||||| ||||| ||||||| ||||    
T  1405182 cgttcttatttaaataccgttttggtattttaaaggtacaatttgtcaattataccatttgtcaattactctaatatttttaaataacactaattaatgc 1405281  T
Q  283 tat 285  Q
    |||    
T  1405282 tat 1405284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 10614555 - 10614649
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    ||||| ||||||||||||||||||  ||||||  |||| ||||||||| || |||| ||| ||||||||||||| |||||||| |||||||||||    
T  10614555 cgttcttatttaactgtcgttttggcattttatgggtaagatttgtcacttgtaccatttctcaattactcttatctttttcattaaaactaatt 10614649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 29556629 - 29556540
Alignment:
Q  185 ttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaa 275  Q
    ||||||||||||| || |||| ||||||||| ||||| |||| ||||||||||  ||| ||||||||||||| ||||||||||||||||||    
T  29556629 ttcctatttaactatcatttttatattttaa-ggtataatttatcaattatacaatttctcaattactcttatctttttcaataaaactaa 29556540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 19234240 - 19234168
Alignment:
Q  79 aggggaataaattggttttggattgcccttttcattttcaattatacccttaaccaaatttatgcagaaaaatg 152  Q
    |||||||||||| | ||||||| |||| ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  19234240 aggggaataaatag-ttttggactgccattttcattttcaattatacccttaatcaaatttctgcagaaaaatg 19234168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 21934649 - 21934558
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttc 264  Q
    |||||||||| ||||||||||||||||||||||  |||||||| |||  | |||| ||| ||||||| ||||||||||||| || |||||||    
T  21934649 gtgaattttttgttcctatttaactgtcgttttagtattttaagggtgcgttttgccaactatacccattgtcaattactcgtatctttttc 21934558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 264
Target Start/End: Complemental strand, 44941021 - 44940942
Alignment:
Q  185 ttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttc 264  Q
    ||||||||||||  |||||||| |||||||| |||| ||||| ||||||||||||||| |||||||||| || |||||||    
T  44941021 ttcctatttaaccatcgttttggtattttaagggtacgatttttcaattataccctttatcaattactcgtatctttttc 44940942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 20141098 - 20141021
Alignment:
Q  225 ttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||||| |||| ||| ||| ||||| ||||| ||||    
T  20141098 ttgtcaattataccttttctcaattactcttatctttttcaataaaacaaattaatgttatgtatttaaaaaattaaa 20141021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 302
Target Start/End: Original strand, 23272051 - 23272128
Alignment:
Q  225 ttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||||||||  ||| ||||||| ||||| ||||||||||||||| |||| ||||||||||||| ||||| ||||    
T  23272051 ttgtcaattatacattttctcaattattcttatctttttcaataaaacaaattaatgctatatatttaaaaaattaaa 23272128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 21934548 - 21934494
Alignment:
Q  248 ttactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||    
T  21934548 ttactcttatcttttttaataaaactaattaatgctatatatttggaaaactaaa 21934494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 45667420 - 45667478
Alignment:
Q  176 aatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaatta 234  Q
    ||||||||||||||||||||||||| ||||  |||||||| | ||||||||||||||||    
T  45667420 aatttttcgttcctatttaactgtctttttagtattttaaggttatgatttgtcaatta 45667478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 45652565 - 45652471
Alignment:
Q  188 ctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactc----ttac-ctttttcaataaaactaatt 277  Q
    |||||||||| | | |||||||||||||| |||| ||||||||||||||| |||| ||||| ||||    |||| ||||||||||||||||||||    
T  45652565 ctatttaactattgctttgatattttaaatgtataatttgtcaattatactctttctcaatcactcacatttactctttttcaataaaactaatt 45652471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 16237709 - 16237651
Alignment:
Q  176 aatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaatta 234  Q
    ||||||||||||||||||||||||| ||||| |||||| |  ||| |||||||||||||    
T  16237709 aatttttcgttcctatttaactgtctttttggtattttcatagtacgatttgtcaatta 16237651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 44940932 - 44940878
Alignment:
Q  248 ttactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||| |||||| ||||||||||||| ||||||||||||||||||| ||||    
T  44940932 ttacttttatcttttttaataaaactaattaatgctatatatttgaaaaattaaa 44940878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 7259759 - 7259718
Alignment:
Q  259 tttttcaataaaactaattcatgctatatatttgaaaaacta 300  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  7259759 tttttcaataaaactaattaatgctatatatttggaaaacta 7259718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 2599027 - 2599087
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaatta 234  Q
    |||| ||||| || |||||||||| || |||||||||||||| |||| |||||||||||||    
T  2599027 tgaaattttcatttctatttaactatctttttgatattttaagggtacgatttgtcaatta 2599087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 38751151 - 38751097
Alignment:
Q  248 ttactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||  |||||| ||||||||||| | |||||||||||||| |||||||||    
T  38751151 ttactcttgtcttttttaataaaactaagtaatgctatatatttggaaaactaaa 38751097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 39492050 - 39492116
Alignment:
Q  189 tatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactctt 255  Q
    ||||||||||||||||||||||||||| | ||  | || ||||||||||||||| ||  ||||||||    
T  39492050 tatttaactgtcgttttgatattttaaggttacaacttatcaattataccctttctcggttactctt 39492116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 45667468 - 45667526
Alignment:
Q  240 tttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaac 298  Q
    ||||||||||||| | | |||||||||||||| ||||| ||||||| |||||| |||||    
T  45667468 tttgtcaattactttgatctttttcaataaaattaattaatgctatctatttggaaaac 45667526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 297
Target Start/End: Complemental strand, 16237661 - 16237604
Alignment:
Q  240 tttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaa 297  Q
    ||||||||||||| |||  |||||||||||| |||||| ||||||| |||||| ||||    
T  16237661 tttgtcaattactattatatttttcaataaagctaattaatgctatctatttggaaaa 16237604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 173 - 300
Target Start/End: Original strand, 27746414 - 27746541
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||  |||||| |||  ||||||||||||||    
T  27746414 gtgaatttttcgttcctatttaactgtcgttttggtattttaagggtatgatttgtcaattataccttttgtttattacttttatatttttcaataaaac 27746513  T
Q  273 taattcatgctatatatttgaaaaacta 300  Q
    ||||| ||||||||||||||||||||||    
T  27746514 taattaatgctatatatttgaaaaacta 27746541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 150420 - 150293
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||||||||||||||||| ||||| |||||||| |||| |||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  150420 gtgaatttttcgttcctatttaactgtctttttggtattttaagggtacgattcgtcaattataccctttgtcaattactctta--tttttcaataaaac 150323  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||| ||||||||||||||||||||    
T  150322 taattaatgttatatatttgaaaaactaaa 150293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 20171584 - 20171453
Alignment:
Q  171 gtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaa 270  Q
    |||||||||||||||| ||||||||||||||||| | |||||| |  | |||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  20171584 gtgtgaatttttcgtttctatttaactgtcgtttcgctattttgagagcatgagttgtcaattataccctttgtcaattactcttatctttttcaataaa 20171485  T
Q  271 actaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||| ||| |||||||||| |||||||||    
T  20171484 actaattaatgttatatatttggaaaactaaa 20171453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 42756740 - 42756864
Alignment:
Q  176 aatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaa 275  Q
    |||||||||||| ||||||||||| |||||| |||||||| |||||||||||||||||||| | ||||||||||| |||||  |||||||||||||||||    
T  42756740 aatttttcgttcatatttaactgttgttttggtattttaagggtatgatttgtcaattatatcttttgtcaattattcttatatttttcaataaaactaa 42756839  T
Q  276 ttcatgctatatatttgaaaaacta 300  Q
    || ||||||||||||| ||||||||    
T  42756840 ttaatgctatatatttaaaaaacta 42756864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 169 - 302
Target Start/End: Original strand, 15507394 - 15507525
Alignment:
Q  169 tagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaata 268  Q
    ||||||| ||||||  || |||||||||||||| |||| ||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  15507394 tagtgtgtattttttatttctatttaactgtcgatttggtattt-aagggtatgatttgtcaattataccctttgtcaattactcttatctttttcaat- 15507491  T
Q  269 aaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| |||||||||| |||||||||||||    
T  15507492 aaactaattaatgctatataattgaaaaactaaa 15507525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 21252527 - 21252656
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||  ||||||| |||| |||| ||||||||| |||| |||||||||||||||| ||||||||||||| |||| ||||||||||||||     
T  21252527 gtgaatttttcgtttatatttaattgtctttttaatattttaagggtacgatttgtcaattatactctttgtcaattacacttatctttttcaataaaat 21252626  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||||||| ||||||||||||||||    
T  21252627 taattaatgctatctatttgaaaaactaaa 21252656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 184 - 302
Target Start/End: Original strand, 4316654 - 4316773
Alignment:
Q  184 gttcctatttaactgtcgttttgatattttaaagg-tatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgc 282  Q
    ||||||||||||||||||||||| |||||| |||| | |||||||||||||||| | ||||||||||||||||| |||||||||||||||||||| |||     
T  4316654 gttcctatttaactgtcgttttggtatttttaaggatgtgatttgtcaattatatcttttgtcaattactcttatctttttcaataaaactaattaatgt 4316753  T
Q  283 tatatatttgaaaaactaaa 302  Q
    |||||||||| |||||||||    
T  4316754 tatatatttggaaaactaaa 4316773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 199 - 302
Target Start/End: Original strand, 44898083 - 44898186
Alignment:
Q  199 tcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaac 298  Q
    |||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  44898083 tcgttttagtattttaaaggtacgatttttcaattataccctttgtcaattactcttatctttttcaataaaactaattaatgttatatatttgaaaaac 44898182  T
Q  299 taaa 302  Q
    ||||    
T  44898183 taaa 44898186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 25966016 - 25965887
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||| ||||||||||||| |||||||| |||||||| |||| |||||||||| ||||||||||||||||||||||||  ||||||||||||||    
T  25966016 gtgaatttttcattcctatttaactatcgttttggtattttaagggtacgatttgtcaactataccctttgtcaattactcttatatttttcaataaaac 25965917  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    | |||     ||||||||||||||||||||    
T  25965916 tcattatcattatatatttgaaaaactaaa 25965887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 38589444 - 38589315
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||||||||||||||| | ||||| ||||||||||||| ||||| ||||||||||| ||||||||||||| ||| ||||||||||||||     
T  38589444 gtgaatttttcgttcctatttaactgccattttggtattttaaaggtacgatttatcaattataccatttgtcaattacttttatctttttcaataaaat 38589345  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
     |||| ||||||| |||||  |||||||||    
T  38589344 caattaatgctatctatttagaaaactaaa 38589315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 163 - 302
Target Start/End: Complemental strand, 36244189 - 36244050
Alignment:
Q  163 tcgtcctagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaagg-tatgatttgtcaattataccctttgtcaattactcttaccttt 261  Q
    |||| |||||||| |||| | |||||||| |||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||  |||    
T  36244189 tcgttctagtgtggatttat-gttcctatctaactgtcattttggtatttttaaggatatgatttgtcaattataccctttgtcaattactcttatattt 36244091  T
Q  262 ttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    || ||||||||||||| ||| |||||||||| |||||||||    
T  36244090 tttaataaaactaattaatgttatatatttggaaaactaaa 36244050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 176 - 302
Target Start/End: Complemental strand, 4959521 - 4959395
Alignment:
Q  176 aatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaa 275  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||| ||||||||| | |||||   |||| ||||||| |||    
T  4959521 aatttttcgttcctatttaactatcgttttggtattttaagggtatgatttgtcaattataccgtttgtcaatcattcttatagtttttaataaaattaa 4959422  T
Q  276 ttcatgctatatatttgaaaaactaaa 302  Q
    || |||||||||||||| | |||||||    
T  4959421 ttaatgctatatatttggataactaaa 4959395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 168 - 302
Target Start/End: Original strand, 41540986 - 41541120
Alignment:
Q  168 ctagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaat 267  Q
    |||||| | |||||| ||| |||||||||| || ||||| |||||||| ||||| |||| | ||||||| | ||||||| ||||||||| ||||||||||    
T  41540986 ctagtgcggatttttagtttctatttaactctcattttggtattttaagggtataatttataaattatatcttttgtcatttactcttatctttttcaat 41541085  T
Q  268 aaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||||| ||||||||||||||||||||||||    
T  41541086 aaaactaattaatgctatatatttgaaaaactaaa 41541120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 3309980 - 3309852
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||| ||||||||||||| |||||||||||| | |||| |||||||||||||||   ||||||||||||| |||  ||||||||||||||    
T  3309980 gtgaatttttcgtttctatttaactgtctttttgatattttcagggtaagatttgtcaattatagaatttgtcaattactttta-ttttttcaataaaac 3309882  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    |||||  |||||| ||||||||||||||||    
T  3309881 taattattgctatctatttgaaaaactaaa 3309852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 11074098 - 11073996
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||||||||||||||||| ||||| |||||||| ||||  |||||||||||||||||||||||||||||||||| |||||||  ||||||    
T  11074098 gtgaatttttcgttcctatttaactgtctttttggtattttaagggtacaatttgtcaattataccctttgtcaattactcttatctttttc--taaaac 11074001  T
Q  273 taatt 277  Q
    |||||    
T  11074000 taatt 11073996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 11083859 - 11083978
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgc 282  Q
    |||| ||||||||||||||||||  |||||||| || ||||||||| ||||||||| |||||||||| |||| | |||||| ||||||||||||| |||     
T  11083859 cgtttctatttaactgtcgtttttgtattttaagggaatgatttgttaattataccttttgtcaatttctctgatcttttttaataaaactaattaatgt 11083958  T
Q  283 tatatatttgaaaaactaaa 302  Q
    ||||||||||||||||||||    
T  11083959 tatatatttgaaaaactaaa 11083978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 163 - 299
Target Start/End: Original strand, 33659638 - 33659775
Alignment:
Q  163 tcgtcctagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaagg-tatgatttgtcaattataccctttgtcaattactcttaccttt 261  Q
    |||| |||||||| ||||||||||||||| ||||  || ||||  |||||| |||| ||| |||||||||||||| | ||||||||||||||||| ||||    
T  33659638 tcgttctagtgtggatttttcgttcctatgtaacaatcattttagtatttttaagggtataatttgtcaattatatcatttgtcaattactcttatcttt 33659737  T
Q  262 ttcaataaaactaattcatgctatatatttgaaaaact 299  Q
    |||||||||||||||| ||  |||||||||||||||||    
T  33659738 ttcaataaaactaattaatattatatatttgaaaaact 33659775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 287
Target Start/End: Complemental strand, 20891445 - 20891332
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||| ||||||||| | ||||||||||||||||    |||||||||||||    
T  20891445 gtgaatttttcgttcctatttaactgtcgttttgatattttaagggtacaatttatcaattatatcatttgtcaattactctt-gtattttcaataaaac 20891347  T
Q  273 taattcatgctatat 287  Q
    ||||| ||| |||||    
T  20891346 taattaatgttatat 20891332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 1397402 - 1397531
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaa-taaaac 272  Q
    ||||||||||||||||||||||||||| ||||| ||||||||  ||| |||||| |||| ||||||||||||||||||| ||| ||||||    ||||||    
T  1397402 tgaatttttcgttcctatttaactgtctttttgctattttaagcgtacgatttggcaataataccctttgtcaattacttttatcttttttttgtaaaac 1397501  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||||||| ||||||||||| ||||    
T  1397502 taattaatgctatctatttgaaaaattaaa 1397531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 299
Target Start/End: Complemental strand, 29882294 - 29882183
Alignment:
Q  188 ctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatat 287  Q
    ||||||||| ||||||||| |||||||| | |||||||||| | ||||||||||| |||| |||||||| |||||| ||||||||||||  ||| |||||    
T  29882294 ctatttaaccgtcgttttgttattttaaggatatgatttgttacttataccctttctcaactactcttatctttttgaataaaactaatcaatgttatat 29882195  T
Q  288 atttgaaaaact 299  Q
    ||||||||||||    
T  29882194 atttgaaaaact 29882183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 16806693 - 16806564
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttc-aataaaa 271  Q
    ||||||||||||||| |||||||||||| ||||| |||||||  | || |||||||||||||||||||||||||||||| ||||  |||||| || ||||    
T  16806693 gtgaatttttcgttcttatttaactgtc-ttttggtattttagggataagatttgtcaattataccctttgtcaattacacttatatttttcaaaaaaaa 16806595  T
Q  272 ctaattcatgctatatatttgaaaaactaaa 302  Q
    |||||| ||| | | ||||||||||||||||    
T  16806594 ctaattaatgttgtctatttgaaaaactaaa 16806564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 16845974 - 16845845
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttc-aataaaa 271  Q
    ||||||||||||||| |||||||||||| ||||| |||||||  | || |||||||||||||||||||||||||||||| ||||  |||||| || ||||    
T  16845974 gtgaatttttcgttcttatttaactgtc-ttttggtattttagggataagatttgtcaattataccctttgtcaattacacttatatttttcaaaaaaaa 16845876  T
Q  272 ctaattcatgctatatatttgaaaaactaaa 302  Q
    |||||| ||| | | ||||||||||||||||    
T  16845875 ctaattaatgttgtctatttgaaaaactaaa 16845845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 45273542 - 45273440
Alignment:
Q  189 tatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatata 288  Q
    ||||||| |||| ||||| |||||||| || | |||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||| ||    
T  45273542 tatttaattgtctttttggtattttaagggcacgattcgtcaattataccctttgtcaattactcttatctttttcaataaaactaattaatgatatcta 45273443  T
Q  289 ttt 291  Q
    |||    
T  45273442 ttt 45273440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 302
Target Start/End: Complemental strand, 4701094 - 4700975
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgc 282  Q
    ||||||||||||| |||  ||||| |||||||| | || ||||| ||||||||||  ||||||||||||||||| | |||||||||||| ||||| || |    
T  4701094 cgttcctatttaattgtgcttttggtattttaaggatacgatttatcaattatactatttgtcaattactcttatcgttttcaataaaattaattaatac 4700995  T
Q  283 tatatatttgaaaaactaaa 302  Q
    |||||||||| |||||||||    
T  4700994 tatatatttggaaaactaaa 4700975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 299
Target Start/End: Original strand, 33659507 - 33659630
Alignment:
Q  177 atttttcgttcctatttaactgtcgttttgatattttaaagg-tatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaa 275  Q
    ||||||||||||||| ||||  || ||||| |||||| |||| |||||||||||||||||||  ||| | |||||||||||  |||||||||||||||||    
T  33659507 atttttcgttcctatgtaacaatcattttggtatttttaaggatatgatttgtcaattatacaatttattaattactcttatatttttcaataaaactaa 33659606  T
Q  276 ttcatgctatatatttgaaaaact 299  Q
    || ||| |||||||||| ||||||    
T  33659607 ttaatgttatatatttggaaaact 33659630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 302
Target Start/End: Complemental strand, 158199 - 158105
Alignment:
Q  208 tattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||| | || ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| ||  |||||||||| |||||||||    
T  158199 tattttaaggatacgatttgtcaattataccctttgcaaattactcttatctttttcaataaaactaattaattttatatatttggaaaactaaa 158105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 297
Target Start/End: Complemental strand, 32113482 - 32113373
Alignment:
Q  189 tatttaactgtcgttttgatattttaaa-ggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatat 287  Q
    ||||||| ||| |||||| |||||| || |||||||||||||||||||| ||||| ||||||| |||||  ||||||||||||||||||| ||| |||||    
T  32113482 tatttaagtgttgttttggtatttttaatggtatgatttgtcaattatatcctttatcaattattcttatatttttcaataaaactaattaatgttatat 32113383  T
Q  288 atttgaaaaa 297  Q
    ||||| ||||    
T  32113382 atttggaaaa 32113373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 34424919 - 34424794
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||| ||||||| |||||||||  |||||||| | ||| |||||||||||| |||||||||| |||| | |||  |||||||| |||||    
T  34424919 gtgaatttttcgttcatatttaaatgtcgtttttgtattttaaggttataatttgtcaattaaaccctttgtcgattattattatatttttcaacaaaac 34424820  T
Q  273 taattcatgctatatatttgaaaaac 298  Q
    ||||| ||  |||||||||| |||||    
T  34424819 taattaatattatatatttggaaaac 34424794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 1770293 - 1770193
Alignment:
Q  202 ttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaa 301  Q
    ||||| |||||||| | || ||||| ||||||||| | ||||||||| |||||||  ||||||||||||||||||| ||| |||||||||||||||||||    
T  1770293 ttttggtattttaaggatacgatttatcaattatatcatttgtcaatcactcttaattttttcaataaaactaattaatgttatatatttgaaaaactaa 1770194  T
Q  302 a 302  Q
    |    
T  1770193 a 1770193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 297
Target Start/End: Original strand, 41117387 - 41117496
Alignment:
Q  189 tatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttac-ctttttcaataaaactaattcatgctatat 287  Q
    ||||||| |||| ||||||||| ||||  |||| ||||||||||||||  |||| ||||||||||||||  ||||||||||||||||||| || |||| |    
T  41117387 tatttaattgtcattttgatatcttaagtgtataatttgtcaattatagactttctcaattactcttactatttttcaataaaactaattaatactatct 41117486  T
Q  288 atttgaaaaa 297  Q
    ||||||||||    
T  41117487 atttgaaaaa 41117496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 37360287 - 37360387
Alignment:
Q  177 atttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaat 276  Q
    |||| |||||| ||||||||||| |||| | |||||||||| |||||||||| | || |||||||| |||||||||||||  ||||||| ||||||||||    
T  37360287 atttatcgttcatatttaactgttgtttaggtattttaaagatatgatttgttatttgtaccctttctcaattactcttatatttttcactaaaactaat 37360386  T
Q  277 t 277  Q
    |    
T  37360387 t 37360387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 302
Target Start/End: Complemental strand, 408615 - 408502
Alignment:
Q  188 ctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatat 287  Q
    ||||||||| |||||||||||||||||  | ||  |||| |||||||||| ||||  | ||| ||||||||||||||||||||||||||| || ||||||    
T  408615 ctatttaaccgtcgttttgatattttatggatacaatttatcaattatactctttcccgatt-ctcttacctttttcaataaaactaattaatactatat 408517  T
Q  288 atttgaaaaactaaa 302  Q
    |||| ||||| ||||    
T  408516 atttaaaaaattaaa 408502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 179 - 296
Target Start/End: Complemental strand, 42872390 - 42872273
Alignment:
Q  179 ttttcgttcctatttaactgtcgttttgatattttaaag-gtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    ||||||||  ||||||| |||||||||| || ||| ||| |||  |||||||||||||||| |||||||||||||||||  ||||| ||| |||||||||    
T  42872390 ttttcgtttttatttaagtgtcgttttggtaattttaagagtaaaatttgtcaattataccttttgtcaattactcttattttttttaat-aaactaatt 42872292  T
Q  278 catgctatatatttgaaaa 296  Q
     ||| ||||||||||||||    
T  42872291 aatgttatatatttgaaaa 42872273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 299
Target Start/End: Complemental strand, 13141002 - 13140906
Alignment:
Q  202 ttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaact 299  Q
    ||||| |||||||| ||||| |||| ||||||||||| ||  ||||||||||| |  ||||||||||||||||||  ||| ||| |||||||||||||    
T  13141002 ttttggtattttaagggtataatttatcaattatacctttcttcaattactct-atatttttcaataaaactaataaatgttatctatttgaaaaact 13140906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 13386420 - 13386498
Alignment:
Q  223 atttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||||||||||  ||| |||||||||||||  ||||||||| ||||||||| |||| || ||| ||||||||||||    
T  13386420 atttgtcaattatacattttctcaattactcttatttttttcaat-aaactaattaatgccatgtatctgaaaaactaaa 13386498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 296
Target Start/End: Original strand, 2218176 - 2218273
Alignment:
Q  201 gttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttt--tcaataaaactaattcatgctatatatttgaaaa 296  Q
    |||||| |||||||| |||||||||| |||  | ||| |||| |||||||||||||  ||||  ||||||||||||||| ||| ||| ||||||||||    
T  2218176 gttttggtattttaagggtatgatttctcacatttactctttctcaattactcttatttttttttcaataaaactaattaatgatatctatttgaaaa 2218273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 302
Target Start/End: Complemental strand, 29408867 - 29408805
Alignment:
Q  240 tttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||||||| ||| |||||||||||||| ||||| ||| ||| |||||| |||||||||    
T  29408867 tttgtcaattacttttatctttttcaataaaagtaattaatgttatctatttgcaaaactaaa 29408805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 37814534 - 37814591
Alignment:
Q  245 caattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||||||| |||||||||||||||||||  || |||| ||||| ||||||||||    
T  37814534 caattactcttatctttttcaataaaactaataaattctatctatttaaaaaactaaa 37814591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 7486373 - 7486330
Alignment:
Q  259 tttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||    
T  7486373 tttttcaataaaactaattaatgttatatatttggaaaactaaa 7486330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 12411667 - 12411724
Alignment:
Q  245 caattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||| |||||  |||||||||||||||||||    |||||||||||||||||||||    
T  12411667 caattattcttatatttttcaataaaactaattataactatatatttgaaaaactaaa 12411724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 12423727 - 12423784
Alignment:
Q  245 caattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||| |||||  |||||||||||||||||||    |||||||||||||||||||||    
T  12423727 caattattcttatatttttcaataaaactaattataactatatatttgaaaaactaaa 12423784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 29408918 - 29408857
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaatta 234  Q
    ||||||||| ||| ||||||||||| || |||| |||||||||  ||| |||||||||||||    
T  29408918 gtgaattttccgtacctatttaactatcttttttatattttaagtgtacgatttgtcaatta 29408857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 277
Target Start/End: Complemental strand, 34847247 - 34847159
Alignment:
Q  192 ttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattac--tcttac-ctttttcaataaaactaatt 277  Q
    |||||| | ||||| ||||||||||||||  |||| |||||||||| |||| ||||||||   ||||| |||||||||| |||||||||    
T  34847247 ttaactatggttttaatattttaaaggtacaatttatcaattatactctttctcaattacaaacttactctttttcaattaaactaatt 34847159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 4963078 - 4962949
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||| ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| ||||||||||| |||||  ||||||||||||||    
T  4963078 gtgaattttttgttcctatttaactgtcgttttggtattttaagggtatgatttatcaattataccttttgtcaattattcttatatttttcaataaaac 4962979  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    |||||  |||||||||||||||||||||||    
T  4962978 taattagtgctatatatttgaaaaactaaa 4962949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 15643281 - 15643409
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaact 273  Q
    ||||||||||||| ||||||||||||||||||| |||||||| |||| ||||| ||||||||||||||| |||||||||||||  |||||||||||||||    
T  15643281 tgaatttttcgtttctatttaactgtcgttttggtattttaagggtacgatttctcaattataccctttatcaattactcttatttttttcaataaaact 15643380  T
Q  274 aattcatgctatatatttgaaaaactaaa 302  Q
    |||| |||||||||||||| |||||||||    
T  15643381 aattaatgctatatatttggaaaactaaa 15643409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 39430743 - 39430614
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||||||||||||||||| ||||| |||||||| |||| |||||| ||||||||| |||||||||||| |||||  ||||||||||||||    
T  39430743 gtgaatttttcgttcctatttaactgtcattttggtattttaagggtaagatttgacaattatactctttgtcaattattcttatatttttcaataaaac 39430644  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    |||||  |||||||||||||||||||||||    
T  39430643 taattagtgctatatatttgaaaaactaaa 39430614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 169 - 302
Target Start/End: Original strand, 37124115 - 37124248
Alignment:
Q  169 tagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaata 268  Q
    ||||||||||||||||||||| ||||||| || ||||| |||||||| ||||  |||||||||||||||||||||| ||||||||||| |||||||||||    
T  37124115 tagtgtgaatttttcgttcctttttaactttctttttggtattttaagggtacaatttgtcaattataccctttgtaaattactcttatctttttcaata 37124214  T
Q  269 aaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| ||||| | |||||| |||||||||    
T  37124215 aaactaattaatgctctctatttggaaaactaaa 37124248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 173 - 301
Target Start/End: Complemental strand, 35793252 - 35793124
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||| | ||||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35793252 gtgaatttttagctcctatttaactgtctttttggtattttaagggtgtgatttgtcaattataccctttgtcaattactcttatctttttcaataaaac 35793153  T
Q  273 taattcatgctatatatttgaaaaactaa 301  Q
    ||||| ||| | | |||||| ||||||||    
T  35793152 taattaatgttgtctatttggaaaactaa 35793124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 173 - 275
Target Start/End: Complemental strand, 14771551 - 14771449
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||  |||||||||| |||    
T  14771551 gtgaatttttcgttcctatttaactgtcgttttggtattttaagggtatgatttgtcaattataccctttgtcaattattcttatatttttcaatataac 14771452  T
Q  273 taa 275  Q
    |||    
T  14771451 taa 14771449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 173 - 275
Target Start/End: Complemental strand, 15222003 - 15221901
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||  |||||||||| |||    
T  15222003 gtgaatttttcgttcctatttaactgtcgttttggtattttaagggtatgatttgtcaattataccctttgtcaattattcttatatttttcaatataac 15221904  T
Q  273 taa 275  Q
    |||    
T  15221903 taa 15221901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 184 - 302
Target Start/End: Original strand, 2798562 - 2798679
Alignment:
Q  184 gttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgct 283  Q
    |||||||||||| |||| ||||  |||||||| ||||||||||||| |||||||| | ||||||||||||||| |||||||||||||||||||| |||||    
T  2798562 gttcctatttaaatgtcattttagtattttaagggtatgatttgtcgattatacc-tctgtcaattactcttatctttttcaataaaactaattaatgct 2798660  T
Q  284 atatatttgaaaaactaaa 302  Q
    |||||||||||||||||||    
T  2798661 atatatttgaaaaactaaa 2798679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 184 - 302
Target Start/End: Original strand, 28226504 - 28226622
Alignment:
Q  184 gttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgct 283  Q
    ||||||||||||| ||||||||| |||| ||| |||| | ||||||||||||||| |||||||||| |||||| |||||||||||||||||||| ||| |    
T  28226504 gttcctatttaaccgtcgttttggtattataagggtacgctttgtcaattataccttttgtcaattgctcttatctttttcaataaaactaattaatgtt 28226603  T
Q  284 atatatttgaaaaactaaa 302  Q
    |||||||||||||||||||    
T  28226604 atatatttgaaaaactaaa 28226622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 177 - 302
Target Start/End: Complemental strand, 2273651 - 2273525
Alignment:
Q  177 atttttcgttcctatttaactgtcgttttgatattttaaag-gtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaa 275  Q
    |||| ||||| ||||||||| ||||||||||||||||  || |||  ||||||||||||||| |||||||||||||||||| |||||||||||||||| |    
T  2273651 atttatcgtttctatttaaccgtcgttttgatatttttcagagtacaatttgtcaattatacgctttgtcaattactcttatctttttcaataaaactta 2273552  T
Q  276 ttcatgctatatatttgaaaaactaaa 302  Q
    || |||||||||||||| |||||||||    
T  2273551 ttaatgctatatatttggaaaactaaa 2273525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 4567261 - 4567390
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||||||| ||||||||| ||||||||| ||||| |||||||| | || |||||||| ||||||||||||||||| |||| ||| |||||||||||||||    
T  4567261 gtgaatttgtcgttcctaattaactgtctttttggtattttaaggttacgatttgtcgattataccctttgtcaactacttttatctttttcaataaaac 4567360  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||||||| || ||| |||||||||    
T  4567361 taattaatgctatctagttggaaaactaaa 4567390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 36412978 - 36412849
Alignment:
Q  172 tgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaa 271  Q
    |||||||||  |||||||||||||| ||| |||||||||||||| ||||  |||| |||||||||||||||||  |||||||||| ||||||||| ||||    
T  36412978 tgtgaatttagcgttcctatttaaccgtcattttgatattttaagggtacaatttatcaattataccctttgtttattactcttatctttttcaa-aaaa 36412880  T
Q  272 ctaattcatgctatatatttgaaaaactaaa 302  Q
    |||||| ||| |||| |||||||||||||||    
T  36412879 ctaattaatgttataaatttgaaaaactaaa 36412849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 10535150 - 10535021
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||   ||  |||||||||||||||| |||||||||| |||||| |||||||||||||||    
T  10535150 gtgattttttcgttcctatttaactgtctttttggtattttaagaatacaatttgtcaattataccttttgtcaattcctcttatctttttcaataaaac 10535051  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| |||  || ||||||||||| ||||    
T  10535050 taattaatgtaatctatttgaaaaattaaa 10535021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 24394367 - 24394238
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||| ||||||||||||||||||| || ||||| || ||||| |||| ||||| |||||||||||||||||||| ||||||||  ||||| ||||||||    
T  24394367 gtgaacttttcgttcctatttaactatcattttggtactttaagggtacgatttatcaattataccctttgtcaactactcttatatttttgaataaaac 24394268  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||| | ||| |||||||||| |||||||||    
T  24394267 taactaatgatatatatttggaaaactaaa 24394238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 179 - 302
Target Start/End: Complemental strand, 3835800 - 3835679
Alignment:
Q  179 ttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattc 278  Q
    |||||||||||||||||||||| ||||| |||||||| |||| ||||||||||||||||||| ||||||| ||||||| ||||||||||  ||||||||     
T  3835800 ttttcgttcctatttaactgtctttttggtattttaagggtacgatttgtcaattataccctctgtcaatcactcttatctttttcaat--aactaatta 3835703  T
Q  279 atgctatatatttgaaaaactaaa 302  Q
    ||  ||| |||||| |||||||||    
T  3835702 atattatctatttggaaaactaaa 3835679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 175 - 302
Target Start/End: Original strand, 27723237 - 27723364
Alignment:
Q  175 gaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaacta 274  Q
    |||||||| |||||||||||||| || ||||||||||||||  ||| ||||||||| |||||| |||||| ||||||| ||| |||||||| ||||||||    
T  27723237 gaattttttgttcctatttaactatctttttgatattttaagtgtacgatttgtcacttatactctttgttaattacttttatctttttcagtaaaacta 27723336  T
Q  275 attcatgctatatatttgaaaaactaaa 302  Q
    ||| ||||||| | ||||||||| ||||    
T  27723337 attaatgctatctgtttgaaaaattaaa 27723364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 39247442 - 39247328
Alignment:
Q  163 tcgtcctagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaag-gtatgatttgtcaattataccctttgtcaattactcttaccttt 261  Q
    |||| |||||| ||||||  |||||||||||||||||||||||| |||||| ||| |||||||||||||||| ||||||||||| ||||||||||  |||    
T  39247442 tcgttctagtgcgaatttagcgttcctatttaactgtcgttttggtatttttaagagtatgatttgtcaattgtaccctttgtccattactctta-tttt 39247344  T
Q  262 ttcaataaaactaatt 277  Q
    ||||||||||||||||    
T  39247343 ttcaataaaactaatt 39247328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 170 - 302
Target Start/End: Complemental strand, 39599835 - 39599702
Alignment:
Q  170 agtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttaccttttt-caata 268  Q
    |||| ||||||  |||||||||||| ||||||| ||| |||||||| | ||  |||  ||||||||||||||| ||||||||||||| |||||| | |||    
T  39599835 agtgcgaatttaacgttcctatttagctgtcgtgttggtattttaaggatacaattgttcaattataccctttatcaattactcttatcttttttcgata 39599736  T
Q  269 aaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| ||||||||||||||||||||||||    
T  39599735 aaactaattaatgctatatatttgaaaaactaaa 39599702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 46672176 - 46672095
Alignment:
Q  169 tagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaatta 250  Q
    |||||| ||||||| |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  46672176 tagtgtaaattttttgttcctatttaattgtcgttctgatattttaagggtatgatttgtcaattataccctttgtcaatta 46672095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 25290565 - 25290694
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||| |||| |||||| |||||| || || |||||||| | |||||||| ||||||||| | ||||||||||| |||||  ||||||||||||||    
T  25290565 gtgaattttccgtttctattttactgtcattatggtattttaaggttatgatttatcaattatatcttttgtcaattattcttatatttttcaataaaac 25290664  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| |||   ||||||||||||||||||    
T  25290665 taattaatgtcgtatatttgaaaaactaaa 25290694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 298
Target Start/End: Original strand, 44549977 - 44550101
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaact 273  Q
    |||||||  ||||| |||||||||||||||||| |||||||| |||| ||||||||| || |||| ||| ||||||||||||| |||||||| |||||||    
T  44549977 tgaatttagcgttcttatttaactgtcgttttggtattttaagggtaagatttgtcacttgtaccatttctcaattactcttatctttttcattaaaact 44550076  T
Q  274 aattcatgctatatatttgaaaaac 298  Q
    |||| |||  || ||||| ||||||    
T  44550077 aattaatgacatctattttaaaaac 44550101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 302
Target Start/End: Complemental strand, 7809321 - 7809208
Alignment:
Q  189 tatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatata 288  Q
    ||||||||  |||||||| |||||||| | ||| |||||||||||||||| ||| ||||||||| ||| |||||| ||||||||||||| || |||| ||    
T  7809321 tatttaacaatcgttttggtattttaaggatattatttgtcaattataccatttctcaattacttttatctttttaaataaaactaattaatactatgta 7809222  T
Q  289 tttgaaaaactaaa 302  Q
    || | |||||||||    
T  7809221 ttaggaaaactaaa 7809208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 16196781 - 16196859
Alignment:
Q  223 atttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||| || ||| |||||||||    
T  16196781 atttgtcaattataccctttgtca-ttactcttatctttttcaataaaactaattgatgttatctaattggaaaactaaa 16196859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 302
Target Start/End: Original strand, 43368781 - 43368859
Alignment:
Q  224 tttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| ||||||||||||||||||| ||| |||||| ||||||||||||| | | |||||||||| |||||||||    
T  43368781 tttgtcaatcataccctttgtcaattacttttatctttttaaataaaactaattaaagttatatatttggaaaactaaa 43368859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 47541716 - 47541800
Alignment:
Q  176 aatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttt 262  Q
    |||||||| |||||||||||||| | ||||||||||||||| |||  |||||||||||||||||||| ||||||||||||| |||||    
T  47541716 aatttttcattcctatttaactgcc-ttttgatattttaaatgtacaatttgtcaattatacccttt-tcaattactcttatctttt 47541800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 8614961 - 8614843
Alignment:
Q  181 ttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcat 280  Q
    ||||||| ||||||| |||| ||||| |||||||  |||| ||||| |||||||||||||| ||||||||||||||  ||||| |||||||||||||  |    
T  8614961 ttcgttcatatttaagtgtc-ttttggtattttaggggtacgatttttcaattataccctt-gtcaattactcttattttttt-aataaaactaattatt 8614865  T
Q  281 gctatatatttgaaaaactaaa 302  Q
    | ||| ||||||||||||||||    
T  8614864 gttatctatttgaaaaactaaa 8614843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 39427326 - 39427411
Alignment:
Q  179 ttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttc 264  Q
    |||| ||| |||||||||| |||||||  |||||||| |||  |||||||||||||||| ||||||||||||||| || |||||||    
T  39427326 tttttgtttctatttaactatcgttttagtattttaagggtgcgatttgtcaattatactctttgtcaattactcgtatctttttc 39427411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 277
Target Start/End: Original strand, 39617524 - 39617593
Alignment:
Q  208 tattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    |||||||| |||| ||||||||| ||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  39617524 tattttaagggtacgatttgtcagttataccttttgtcaattacttttatctttttcaataaaattaatt 39617593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 27229899 - 27229804
Alignment:
Q  183 cgttcctatttaactgtcgtttt-gatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    ||||||||||||||||| ||||| | ||||||||||| ||||||| ||| |||||  |||| |||| || | ||| ||||||||||||||||||||    
T  27229899 cgttcctatttaactgttgtttttggtattttaaaggcatgatttctcacttatatgctttctcaactatttttatctttttcaataaaactaatt 27229804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 38707252 - 38707318
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccct 240  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||| || |||||||| ||||||||||    
T  38707252 gtgaatttttcgttcctatttaactatcgttttggtatttt-aagctacgatttgtcgattataccct 38707318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 302
Target Start/End: Complemental strand, 10026291 - 10026227
Alignment:
Q  240 tttgtcaattactcttacctttttcaataaaactaattcatg--ctatatatttgaaaaactaaa 302  Q
    ||||| ||||||||||| |||||||||||||||||||| |||   ||||||||||||||||||||    
T  10026291 tttgttaattactcttatctttttcaataaaactaattaatgttatatatatttgaaaaactaaa 10026227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 39432604 - 39432666
Alignment:
Q  240 tttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||||| | |||  ||||||||||||||| |||  |||||||||||||||||||||||    
T  39432604 tttgtcaattatttttatatttttcaataaaacttattagtgctatatatttgaaaaactaaa 39432666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 14735157 - 14735092
Alignment:
Q  211 tttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaat 276  Q
    ||||| |||| ||||||||| ||||||  ||| | ||||||||||| |||||||||||||||||||    
T  14735157 tttaagggtacgatttgtcatttatactatttcttaattactcttatctttttcaataaaactaat 14735092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 299
Target Start/End: Original strand, 6655093 - 6655204
Alignment:
Q  192 ttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttac-----ctttttcaataaaactaattcatgctata 286  Q
    ||||||||||||||||||  ||||| |||| ||||||| |||||||| ||| ||||||| | ||||      ||||||||||||||| ||| ||  ||||    
T  6655093 ttaactgtcgttttgatagcttaaa-gtatcatttgtcgattataccatttctcaattatttttacttgctttttttcaataaaactgatttattttata 6655191  T
Q  287 tatttgaaaaact 299  Q
    |||||||||||||    
T  6655192 tatttgaaaaact 6655204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 4678434 - 4678477
Alignment:
Q  259 tttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||    
T  4678434 tttttcaataaaactaattaatgttatatatttggaaaactaaa 4678477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 39427421 - 39427476
Alignment:
Q  248 ttactcttacctttttcaataaaactaa-ttcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| |||||| ||||||||||| || |||||||||||||| |||||||||    
T  39427421 ttactcttatcttttttaataaaactaaattaatgctatatatttggaaaactaaa 39427476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 273
Target Start/End: Complemental strand, 1720003 - 1719913
Alignment:
Q  184 gttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttac-ctttttcaataaaact 273  Q
    |||||||||||| ||| ||||||||| ||||   |||| |||| ||||||||| | ||| ||| ||| |||||| ||||||||||||||||    
T  1720003 gttcctatttaattgttgttttgatagtttatttgtataatttatcaattatatcatttctcagttattcttactctttttcaataaaact 1719913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 2272004 - 2271947
Alignment:
Q  192 ttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaatta 250  Q
    ||||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||||    
T  2272004 ttaactgtcattttggtatttttg-ggtacgatttgtcaattataccctttgtcaatta 2271947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 7378504 - 7378454
Alignment:
Q  202 ttttgatattttaaaggtatgatttgtcaattataccctttgtcaattact 252  Q
    ||||||||||||||||||||||||||| | |||| | |||| |||||||||    
T  7378504 ttttgatattttaaaggtatgatttgttatttatcctctttctcaattact 7378454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 42509949 - 42509871
Alignment:
Q  200 cgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttac-ctttttcaataaaactaatt 277  Q
    |||||||||| ||||| | ||  |||||||||| |||  |||| |||||||||||||| ||||||||| ||||||||||    
T  42509949 cgttttgatagtttaaggatacaatttgtcaatcataatctttctcaattactcttactctttttcaacaaaactaatt 42509871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 37072467 - 37072425
Alignment:
Q  229 caattataccctttgtcaattactcttacctttttcaataaaact 273  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||    
T  37072467 caattatacccttt--caattactcttatctttttcaataaaact 37072425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 8049126 - 8049255
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||    
T  8049126 gtgaatttttcgttcttatttaattgtctttttgatattttaaaggtatgatttatcaattttaccctttgtcaattactcttatctttttcaataaaac 8049225  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||| ||| |||||| |||||||||    
T  8049226 taattaatgatatctatttggaaaactaaa 8049255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 9095912 - 9095783
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||| |||||||||||||||||  |||||||| |||||||||||||||||||||| ||||||||||| |||||  ||||||||||||||    
T  9095912 gtgaatttttcgttcttatttaactgtcgttttagtattttaagggtatgatttgtcaattataccatttgtcaattattcttatatttttcaataaaac 9095813  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| |||||||||||||| |||||||||    
T  9095812 taattaatgctatatatttggaaaactaaa 9095783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 174 - 302
Target Start/End: Complemental strand, 21527466 - 21527338
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaact 273  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||||||| ||| |  ||||||| |||||||    
T  21527466 tgaatttttcgttcctatttaattgtcgttttggtattttaagggtatgatttgtcaattaaaccctttgtcaattattctaatatttttcattaaaact 21527367  T
Q  274 aattcatgctatatatttgaaaaactaaa 302  Q
    |||| ||||| ||||||||||||||||||    
T  21527366 aattaatgctttatatttgaaaaactaaa 21527338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 7972775 - 7972646
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||||||||||| ||| ||||||||||||| | |||||||||| |||||||||| |||||||||||| ||| |  ||||||||||||||    
T  7972775 gtgaatttttcgttcctatttaaatgttgttttgatattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaac 7972676  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||| ||||||||||||||||||||    
T  7972675 taattaatgttatatatttgaaaaactaaa 7972646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 175 - 302
Target Start/End: Original strand, 4665827 - 4665954
Alignment:
Q  175 gaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaacta 274  Q
    |||||||||||| ||||||||||||| |||| |||||||||   |||||||||||||||||||| ||| |||||||||||||  ||||| ||||||||||    
T  4665827 gaatttttcgtttctatttaactgtcattttaatattttaagcatatgatttgtcaattataccatttatcaattactcttatatttttaaataaaacta 4665926  T
Q  275 attcatgctatatatttgaaaaactaaa 302  Q
    ||| ||||||||||||||||||||||||    
T  4665927 attaatgctatatatttgaaaaactaaa 4665954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 25056436 - 25056566
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttga-tattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaa 271  Q
    |||||||||||||||||||||||  ||| ||||   |||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  25056436 gtgaatttttcgttcctatttaaaagtctttttctgtattttaagggtatgatttgtcaatcatactctttgtcaattactcttatctttttcaataaaa 25056535  T
Q  272 ctaattcatgctatatatttgaaaaactaaa 302  Q
    |||||| ||||||| |||||| |||||||||    
T  25056536 ctaattaatgctatctatttggaaaactaaa 25056566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 163 - 264
Target Start/End: Complemental strand, 26252770 - 26252669
Alignment:
Q  163 tcgtcctagtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttt 262  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || |||||    
T  26252770 tcgttctagggtgaattttttgttcctatttaactgtcgttttgatattttaaaggtacgatttgtcaattataccatttgtcaattactcgtatctttt 26252671  T
Q  263 tc 264  Q
    ||    
T  26252670 tc 26252669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 178 - 302
Target Start/End: Complemental strand, 2437973 - 2437849
Alignment:
Q  178 tttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    ||||| |||| |||||||||||| |||||  ||||||| |||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  2437973 ttttttgttcttatttaactgtctttttggaattttaagggtatgatttgtcaattataccctttgtcaattattcttatttttttcaataaaactaatt 2437874  T
Q  278 catgctatatatttgaaaaactaaa 302  Q
     ||| ||| |||||| |||||||||    
T  2437873 aatgatatctatttggaaaactaaa 2437849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 184 - 302
Target Start/End: Complemental strand, 6111255 - 6111137
Alignment:
Q  184 gttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgct 283  Q
    |||| |||| ||||||||||||  ||||||||  ||| ||||||||| ||||||| ||| ||||||||||||| |||||| ||||||||||||| ||| |    
T  6111255 gttcatattcaactgtcgttttagtattttaatagtacgatttgtcagttataccatttatcaattactcttatctttttaaataaaactaattaatgtt 6111156  T
Q  284 atatatttgaaaaactaaa 302  Q
    ||||||||| |||||||||    
T  6111155 atatatttggaaaactaaa 6111137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 292
Target Start/End: Original strand, 4184638 - 4184755
Alignment:
Q  175 gaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaacta 274  Q
    |||||||||||| ||||||||||||| |||| |||||||||   ||||||||||||||||| |  ||| |||||||||||||  ||||| ||||||| ||    
T  4184638 gaatttttcgtttctatttaactgtcattttaatattttaagcatatgatttgtcaattattctatttatcaattactcttatatttttaaataaaatta 4184737  T
Q  275 attcatgctatatatttg 292  Q
    ||| ||||||||||||||    
T  4184738 attaatgctatatatttg 4184755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 14093900 - 14093800
Alignment:
Q  202 ttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaa 301  Q
    ||||| |||||||| |||  |||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||  ||||  ||||||||    
T  14093900 ttttggtattttaatggtccgatttgtcaattatactctttgtcaattactcttatctttttcaataaaactaattaatgctatcgattttgaaaactaa 14093801  T
Q  302 a 302  Q
    |    
T  14093800 a 14093800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 292
Target Start/End: Original strand, 23410459 - 23410549
Alignment:
Q  202 ttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttg 292  Q
    |||||||||||||| | || |||||||||||||||| |||||  ||||||| ||| |||||| ||||||||||||| ||| ||||||||||    
T  23410459 ttttgatattttaaggatacgatttgtcaattatactctttgcaaattacttttatcttttttaataaaactaattaatgttatatatttg 23410549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 34889064 - 34889137
Alignment:
Q  229 caattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||||||  || ||||||||||||||| ||||    
T  34889064 caattatactctttgttaattactcttatctttttcaataaaactaattattgttatatatttgaaaaattaaa 34889137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 4122778 - 4122857
Alignment:
Q  223 atttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||| ||||||| ||| ||||||||||||| |||||||||||||| ||||| ||| ||| ||||||||||| ||||    
T  4122778 atttgtcacttataccatttctcaattactcttatctttttcaataaaattaattaatgttatctatttgaaaaagtaaa 4122857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 188 - 291
Target Start/End: Original strand, 27907555 - 27907663
Alignment:
Q  188 ctatttaactgtcgttttgatattttaaaggtatgatttgtcaattatacc-ctttgtcaattact----cttacctttttcaataaaactaattcatgc 282  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||  ||| |||||||||    |||||  |||||||||||| ||| | ||||    
T  27907555 ctatttaactgtcgttttgatagtttaaaggtataatctgtcaattataccattttctcaattactcctacttactcttttcaataaaattaactaatgc 27907654  T
Q  283 tatatattt 291  Q
    |||||||||    
T  27907655 tatatattt 27907663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 21014342 - 21014257
Alignment:
Q  189 tatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaa 275  Q
    |||||||||||| |||||||||||| | |||| ||||||||||||||||||||| ||||| ||| |||  ||||||||| |||||||    
T  21014342 tatttaactgtc-ttttgatatttttagggtacgatttgtcaattataccctttctcaataacttttatttttttcaatcaaactaa 21014257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 31658623 - 31658696
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactctta 256  Q
    |||||||||||||||||| ||||| |||||||| ||||  |||| ||| ||||||| ||| |||||||||||||    
T  31658623 cgttcctatttaactgtcattttggtattttaagggtacaatttatcacttataccatttctcaattactctta 31658696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 302
Target Start/End: Original strand, 31660455 - 31660568
Alignment:
Q  184 gttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgct 283  Q
    |||| |||||||||||  ||||| |||||||| |||| |||||| || |||||||| || |||   |||||||  ||||||||||||||||| | |||||    
T  31660455 gttcatatttaactgttattttggtattttaagggtacgatttgccacttataccccttctca---actctta-ttttttcaataaaactaa-taatgct 31660549  T
Q  284 atatatttgaaaaactaaa 302  Q
    || ||||||||||||||||    
T  31660550 atctatttgaaaaactaaa 31660568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 9353140 - 9353186
Alignment:
Q  246 aattactcttacctttttcaataaaactaattcatgctatatatttg 292  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  9353140 aattactcttatctttttcaataaaactaattaatgctatctatttg 9353186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 26252659 - 26252605
Alignment:
Q  248 ttactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||| |||| ||||    
T  26252659 ttactcttatcttttttaataaaactaattaatgctatatatttggaaaaataaa 26252605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 6396711 - 6396643
Alignment:
Q  210 ttttaaaggtatgatttgtcaattataccctttgtcaattactctta-cctttttcaataaaactaatt 277  Q
    |||||| |||| || |||||||||||||||||| | ||||| ||||| | |||||||||||||||||||    
T  6396711 ttttaagggtaagagttgtcaattataccctttcttaattattcttatcttttttcaataaaactaatt 6396643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 302
Target Start/End: Complemental strand, 12406715 - 12406621
Alignment:
Q  208 tattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||| | ||| |||||| ||||||| ||||| | | |||||  || |||||||||||||||||||| | | ||| |||| |||||||||||    
T  12406715 tattttaaggatataatttgttaattatatcctttctaagttacttatatctttttcaataaaactaatttacgttatctattagaaaaactaaa 12406621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 2655659 - 2655788
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||||||||||| || ||||||| |||||||| |||| ||||| ||||||||||| |||||||||||||||||  ||||||||||||||    
T  2655659 gtgaatttttcgttcctatttaattgccgttttggtattttaagggtacgatttatcaattataccatttgtcaattactcttatatttttcaataaaac 2655758  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||| |||||||||| |||||||||    
T  2655759 taattaatgttatatatttggaaaactaaa 2655788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 11238387 - 11238258
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||||||||||||||||||||||||| |||||| |||||||| |||| ||||||||| |||||||||||| |||||| |||||  ||||||||||||||    
T  11238387 gtgaatttttcgttcctatttaactgtggttttggtattttaagggtacgatttgtcagttataccctttggcaattattcttatatttttcaataaaac 11238288  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||| |||||||||| |||||||||    
T  11238287 taattaatgatatatatttggaaaactaaa 11238258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 177 - 301
Target Start/End: Complemental strand, 36320106 - 36319983
Alignment:
Q  177 atttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaat 276  Q
    ||||||||||| |||||||||||| ||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  36320106 atttttcgttcttatttaactgtctttttggtattttaa-ggtacgatttgtcaattataccatttgtcaattactcttatctttttcaataaaactaat 36320008  T
Q  277 tcatgctatatatttgaaaaactaa 301  Q
    | ||||||| |||||| ||||||||    
T  36320007 taatgctatctatttggaaaactaa 36319983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 174 - 302
Target Start/End: Complemental strand, 1674908 - 1674782
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaact 273  Q
    |||||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||||||||| ||||||||||| |||||  |||||||||||||||    
T  1674908 tgaatttttcgttcct-tttaactgtcgttttagtattttaagggtacgatttgtcaattatacc-tttgtcaattattcttatatttttcaataaaact 1674811  T
Q  274 aattcatgctatatatttgaaaaactaaa 302  Q
    |||| ||| ||||||||||||||||||||    
T  1674810 aattaatgttatatatttgaaaaactaaa 1674782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 301
Target Start/End: Complemental strand, 6295884 - 6295761
Alignment:
Q  178 tttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    |||||||||| |||||||||||| ||||| |||||||| |||  ||||| | ||||||||||||||||| ||||| ||| |||||| |||||||||||||    
T  6295884 tttttcgttcttatttaactgtctttttggtattttaagggtgcgatttattaattataccctttgtcacttacttttatctttttaaataaaactaatt 6295785  T
Q  278 catgctatatatttgaaaaactaa 301  Q
     ||||||| |||||||||||||||    
T  6295784 aatgctatctatttgaaaaactaa 6295761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 52414860 - 52414951
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttc 264  Q
    |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||| || |||||||    
T  52414860 gtgaattttttgttcctatttaactgtcgttttggtattttaagggtatgatttgtcaattataacctttgtcaattactcgtatctttttc 52414951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 3900967 - 3901096
Alignment:
Q  172 tgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaa 271  Q
    |||||||||  |||||||||||||| ||| |||||||||||||| ||||  |||| |||||||||||||||||  |||||||||| ||||||||| ||||    
T  3900967 tgtgaatttagcgttcctatttaaccgtcattttgatattttaagggtacaatttatcaattataccctttgttgattactcttatctttttcaa-aaaa 3901065  T
Q  272 ctaattcatgctatatatttgaaaaactaaa 302  Q
    |||||| ||| |||| |||||||||||||||    
T  3901066 ctaattaatgttataaatttgaaaaactaaa 3901096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 50488903 - 50488774
Alignment:
Q  172 tgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaa 271  Q
    |||||||||  |||||||||||||| ||| |||||||||||||| ||||  |||| |||||||||||||||||  |||||||||| ||||||||| ||||    
T  50488903 tgtgaatttagcgttcctatttaaccgtcattttgatattttaagggtacaatttatcaattataccctttgttgattactcttatctttttcaa-aaaa 50488805  T
Q  272 ctaattcatgctatatatttgaaaaactaaa 302  Q
    |||||| ||| |||| |||||||||||||||    
T  50488804 ctaattaatgttataaatttgaaaaactaaa 50488774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 175 - 302
Target Start/End: Complemental strand, 788423 - 788298
Alignment:
Q  175 gaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaacta 274  Q
    ||||||||||||||||||||| | |||||||| ||||||||  ||||||||| ||||||||||| ||||||||||| ||| |  ||||||||||||||||    
T  788423 gaatttttcgttcctatttaattatcgttttggtattttaa--gtatgatttatcaattataccatttgtcaattattctaatatttttcaataaaacta 788326  T
Q  275 attcatgctatatatttgaaaaactaaa 302  Q
    ||| ||| |||||||||| |||| ||||    
T  788325 attaatgttatatatttggaaaaataaa 788298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 43021089 - 43021208
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgc 282  Q
    |||| |||||||||| |||||||| || |||||  ||| ||||||||||||||||| |||| ||||||||||||  ||| ||||||||||||||| |||     
T  43021089 cgtttctatttaactctcgttttggtactttaagagtacgatttgtcaattataccatttgccaattactcttatatttatcaataaaactaattaatgt 43021188  T
Q  283 tatatatttgaaaaactaaa 302  Q
    ||||||||||||||||||||    
T  43021189 tatatatttgaaaaactaaa 43021208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 269
Target Start/End: Original strand, 39386646 - 39386737
Alignment:
Q  178 tttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataa 269  Q
    |||||| ||||||||||| |||| ||||  |||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  39386646 tttttctttcctatttaagtgtctttttagtattttaagggtatgatttttcaattataccctttgtcaattactcttatctttttcaataa 39386737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 302
Target Start/End: Complemental strand, 10101792 - 10101684
Alignment:
Q  190 atttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatat 289  Q
    ||||||||||  ||||||||||||||||||||   |||||| ||||||||||| ||||||||||||| |||||||||||||||||| | ||||||| |||    
T  10101792 atttaactgttattttgatattttaaaggtat---ttgtcacttataccctttctcaattactcttatctttttcaataaaactaa-taatgctatctat 10101697  T
Q  290 ttgaaaaactaaa 302  Q
    ||| |||||||||    
T  10101696 ttggaaaactaaa 10101684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 208 - 302
Target Start/End: Complemental strand, 13254866 - 13254772
Alignment:
Q  208 tattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||| |||| ||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||||| |||||| | |||||||    
T  13254866 tattttaagggtacgatttgtcaattataccttttatcaattactcttatctttttcaataaaactaattaatgctatctatttggagaactaaa 13254772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 10430612 - 10430538
Alignment:
Q  225 ttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaaact 299  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||||||| |||||||||||||| ||||||    
T  10430612 ttgtcaattataccatttgtcaattactcttatcttttttaataaaactaattaatgctatatatttgcaaaact 10430538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 23699591 - 23699505
Alignment:
Q  178 tttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttc 264  Q
    ||||||||||||||||||| ||||||||  |||||||| | || |||||||||||||||||||||||||||||||| || |||||||    
T  23699591 tttttcgttcctatttaacagtcgtttttgtattttaaggatacgatttgtcaattataccctttgtcaattactcgtatctttttc 23699505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 185 - 302
Target Start/End: Complemental strand, 31623241 - 31623124
Alignment:
Q  185 ttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgcta 284  Q
    |||||||||| |||| |||  |||||||||||||||| |||| ||||||||||||||| ||||||| |||||  |||||| |||||| ||||| ||| ||    
T  31623241 ttcctatttagctgttgttcggatattttaaaggtataatttatcaattataccctttatcaattattcttatatttttccataaaattaattaatgtta 31623142  T
Q  285 tatatttgaaaaactaaa 302  Q
    |||||||  |||||||||    
T  31623141 tatatttcgaaaactaaa 31623124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 32768916 - 32769006
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttc 264  Q
    |||||||||| |||| |||||||||||||| |||||||||||| |||| |||||||||||||||| |||| |||||||||| || |||||||    
T  32768916 gtgaattttttgttc-tatttaactgtcgtcttgatattttaagggtacgatttgtcaattatactctttatcaattactcgtatctttttc 32769006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 30279957 - 30280037
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactc 253  Q
    ||||| |||| ||||||||||||||||| ||||  |||||||| |||  ||||||||||||||||||||||||||||||||    
T  30279957 gtgaactttttgttcctatttaactgtcattttagtattttaagggtgcgatttgtcaattataccctttgtcaattactc 30280037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 23698747 - 23698814
Alignment:
Q  210 ttttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||||||    
T  23698747 ttttaagggtatgatttgtcaattatatcctttgtcaattactcttatatttttaaataaaactaatt 23698814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 39157001 - 39157127
Alignment:
Q  170 agtgtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactctta-cctttttcaata 268  Q
    ||||||||| |  ||||| |||||||| | ||||||| ||||||||| |||  |||||||| ||||||||||||| |||||||||||   ||||| ||||    
T  39157001 agtgtgaatctaacgttcttatttaacggccgttttggtattttaaaagtacaatttgtcagttataccctttgttaattactcttatttttttttaata 39157100  T
Q  269 aaactaattcatgctatatatttgaaa 295  Q
     |||||||| ||| |||||||||||||    
T  39157101 gaactaattaatgttatatatttgaaa 39157127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 302
Target Start/End: Original strand, 52281688 - 52281793
Alignment:
Q  197 tgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaa 296  Q
    ||||||||||  ||||||| ||| |||||||||| ||||| ||||| |||| |||||  | |||||||||||||||||||| ||| ||| ||||| ||||    
T  52281688 tgtcgttttgtaattttaagggtttgatttgtcacttatatcctttctcaactactcggatctttttcaataaaactaattaatgttatctatttaaaaa 52281787  T
Q  297 actaaa 302  Q
    ||||||    
T  52281788 actaaa 52281793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 298
Target Start/End: Complemental strand, 21967289 - 21967174
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgc 282  Q
    ||||| ||||||||||||||||||  ||||||| |||| ||||||||| || |||| ||| | ||||||||| | |||||||| ||||||||||| |||     
T  21967289 cgttcttatttaactgtcgttttggcattttaagggtaagatttgtcacttgtaccatttcttaattactctcatctttttcattaaaactaattaatga 21967190  T
Q  283 tatatatttgaaaaac 298  Q
     || ||||| ||||||    
T  21967189 catctattttaaaaac 21967174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 23699495 - 23699441
Alignment:
Q  248 ttactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||| |||| |||||||||||||||||||| |||||||||||||| |||||||||    
T  23699495 ttacgcttatctttttcaataaaactaattaatgctatatatttggaaaactaaa 23699441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 40519266 - 40519212
Alignment:
Q  248 ttactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||    
T  40519266 ttactcttatcttttttaataaaactaattaatgctatatatttggaaaactaaa 40519212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 4396185 - 4396093
Alignment:
Q  184 gttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    |||| ||||||||||| |||||  ||||||||  |||| |||||||||||||   ||||||||||||||| ||  |||||||||||||||||||    
T  4396185 gttcttatttaactgtagttttagtattttaagagtataatttgtcaattatttactttgtcaattactcata-ttttttcaataaaactaatt 4396093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 24140353 - 24140422
Alignment:
Q  188 ctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttac 257  Q
    ||||||||||||| |||||||||||||| ||||| |||||||| || || | ||| ||||||||||||||    
T  24140353 ctatttaactgtccttttgatattttaagggtataatttgtcacttttaacatttctcaattactcttac 24140422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 21535933 - 21535881
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattat 235  Q
    ||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||    
T  21535933 cgttcctttttaagtgtcattttggtattttaaaggtatgatttgtcaattat 21535881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 4671439 - 4671493
Alignment:
Q  248 ttactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| |||||| ||||||||||||| || ||||||||||| |||||||||    
T  4671439 ttactcttatcttttttaataaaactaattaatactatatatttggaaaactaaa 4671493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 32769020 - 32769070
Alignment:
Q  252 tcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||| |||||| ||||||||||||| ||| ||||||||||||||||||||    
T  32769020 tcttatcttttttaataaaactaattaatgatatatatttgaaaaactaaa 32769070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 37710577 - 37710523
Alignment:
Q  202 ttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactctta 256  Q
    |||||||||||||||  |||||||| |||||||||| |||| |||||||||||||    
T  37710577 ttttgatattttaaaaatatgatttatcaattatactctttctcaattactctta 37710523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 52414961 - 52415015
Alignment:
Q  248 ttactcttacctttttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    ||||||||| |||||| ||||||||||||| ||| |||||||||| |||||||||    
T  52414961 ttactcttatcttttttaataaaactaattaatgttatatatttggaaaactaaa 52415015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 4671373 - 4671418
Alignment:
Q  208 tattttaaaggtatgatttgtcaattataccctttgtcaattactc 253  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  4671373 tattttaaaggtacgatttttcaattataccctttatcaattactc 4671418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 287
Target Start/End: Complemental strand, 21535892 - 21535845
Alignment:
Q  240 tttgtcaattactcttacctttttcaataaaactaattcatgctatat 287  Q
    ||||||||||| |||||  ||||||||||||||||||| |||||||||    
T  21535892 tttgtcaattattcttatatttttcaataaaactaattaatgctatat 21535845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 20769494 - 20769555
Alignment:
Q  189 tatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaatta 250  Q
    ||||||||||||||||| ||| |||||| |||  |||| |||||||||| |||| |||||||    
T  20769494 tatttaactgtcgttttaatagtttaaaagtacaatttatcaattatacactttctcaatta 20769555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 39157128 - 39157169
Alignment:
Q  261 tttcaataaaactaattcatgctatatatttgaaaaactaaa 302  Q
    |||||||| |||||||| ||| ||||||||||||||||||||    
T  39157128 tttcaatagaactaattaatgttatatatttgaaaaactaaa 39157169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 32186472 - 32186516
Alignment:
Q  189 tatttaactgtcgttttgatattttaaaggtatgatttgtcaatt 233  Q
    ||||||||||||||||||||| ||||| ||||  |||||||||||    
T  32186472 tatttaactgtcgttttgatactttaatggtaaaatttgtcaatt 32186516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 47680817 - 47680749
Alignment:
Q  184 gttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattact 252  Q
    ||||||||||||| |||||||||||| ||||  | ||| |||  ||||||||| ||||| |||||||||    
T  47680817 gttcctatttaaccgtcgttttgatagtttactgatataattcatcaattatatcctttatcaattact 47680749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 256691 - 256820
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||  |||  |||||||||||||||| |||||||||| |||||| |||||||||||||||    
T  256691 gtgattttttcgttcctatttaactgtctttttggtattttaagagtaccatttgtcaattataccatttgtcaatttctcttatctttttcaataaaac 256790  T
Q  273 taattcatgctatatatttgaaaaactaaa 302  Q
    ||||| ||| ||| |||||| |||||||||    
T  256791 taattaatgttatctatttggaaaactaaa 256820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 174 - 302
Target Start/End: Complemental strand, 272516 - 272388
Alignment:
Q  174 tgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaact 273  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  |||| ||||||||| ||| |||||||||| ||||  |||||||||||||||    
T  272516 tgaatttttcgttcctatttaactgtcgttttgatattttaatggtacaatttatcaattataacctctgtcaattacacttatatttttcaataaaact 272417  T
Q  274 aattcatgctatatatttgaaaaactaaa 302  Q
    ||   || ||| |||||||||||| ||||    
T  272416 aacgaatactacatatttgaaaaattaaa 272388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 332 - 455
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaac 272  Q
    ||||| |||||||| ||||||||||||||||||| ||||| || |||||||||| ||||| ||||||||||||||||| |||||   |||||||||||||    
T  332 gtgaaattttcgtttctatttaactgtcgttttggtatttaaagggtatgatttttcaatcataccctttgtcaattattcttataattttcaataaaac 431  T
Q  273 taattcatgctatatatttgaaaa 296  Q
    ||||| ||| ||||||||||||||    
T  432 taattaatgttatatatttgaaaa 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 72; Significance: 9e-33; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 14876 - 14994
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgc 282  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||| || | | |||||||||||||||||| |||     
T  14876 cgttcatatttaactgtcgttttggtattttaagggtatgatttgtcaattataccttttgtcaattaccctcatc-ttttcaataaaactaattaatgt 14974  T
Q  283 tatatatttgaaaaactaaa 302  Q
    |||||||||| |||||||||    
T  14975 tatatatttggaaaactaaa 14994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 15373 - 15281
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaatt 277  Q
    |||| ||||||||||||| |||| ||||||| |  |||  |||||||||| ||| |||| ||||| ||||||||  |||||||||||||||||||    
T  15373 cgtttctatttaactgtcatttt-atatttttagagtacaatttgtcaatcatatcctt-gtcaactactcttatttttttcaataaaactaatt 15281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1327 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 177 - 302
Target Start/End: Original strand, 822 - 947
Alignment:
Q  177 atttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaat 276  Q
    |||||||||||||||||||||  | ||||||||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||||||| ||||||||    
T  822 atttttcgttcctatttaacttcctttttgatattttaaaggtacgatttgtcaattataccttttctcaattacttttatctttttcaatgaaactaat 921  T
Q  277 tcatgctatatatttgaaaaactaaa 302  Q
    | ||||||| || ||| |||| ||||    
T  922 tgatgctatctagttggaaaattaaa 947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 186 - 302
Target Start/End: Complemental strand, 6519 - 6403
Alignment:
Q  186 tcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctttgtcaattactcttacctttttcaataaaactaattcatgctat 285  Q
    ||||||||||||||||||||| ||||||||  ||||||||| ||||||||| |||||||||||||||  ||  ||||||||||||| |||||  || |||    
T  6519 tcctatttaactgtcgttttggtattttaagtgtatgatttatcaattatatcctttgtcaattacttctatgtttttcaataaaattaattattgttat 6420  T
Q  286 atatttgaaaaactaaa 302  Q
    ||||||| |||||||||    
T  6419 atatttggaaaactaaa 6403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 46691 - 46639
Alignment:
Q  183 cgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattat 235  Q
    ||||||| |||||||||||||||| |||||||| |||||||||||||||||||    
T  46691 cgttcctttttaactgtcgttttggtattttaagggtatgatttgtcaattat 46639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 46650 - 46594
Alignment:
Q  240 tttgtcaattactcttacctttttcaataaaactaattcatgctatatatttgaaaa 296  Q
    ||||||||||| |||||   |||||||||||| ||||| ||||||||||||||||||    
T  46650 tttgtcaattattcttataattttcaataaaattaattaatgctatatatttgaaaa 46594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 202269 - 202331
Alignment:
Q  173 gtgaatttttcgttcctatttaactgtcgttttgatattttaaaggtatgatttgtcaattataccctt 241  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||      ||||||||||||||||||||    
T  202269 gtgaatttttcgttcctattcaactgtctttttggtattttaa------gatttgtcaattataccctt 202331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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