View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17992_low_20 (Length: 293)

Name: NF17992_low_20
Description: NF17992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17992_low_20
NF17992_low_20
[»] chr1 (61 HSPs)
chr1 (16-267)||(30434479-30434731)
chr1 (75-174)||(30273188-30273287)
chr1 (21-72)||(2472589-2472640)
chr1 (15-73)||(8620191-8620250)
chr1 (15-78)||(15336370-15336433)
chr1 (16-75)||(42736821-42736880)
chr1 (21-83)||(33645004-33645066)
chr1 (17-89)||(8928799-8928872)
chr1 (16-73)||(18458802-18458859)
chr1 (16-73)||(24987608-24987665)
chr1 (16-75)||(7112492-7112552)
chr1 (16-75)||(34748279-34748339)
chr1 (16-78)||(7454884-7454946)
chr1 (27-73)||(28410914-28410960)
chr1 (16-73)||(44200327-44200385)
chr1 (17-78)||(44826076-44826138)
chr1 (43-89)||(51470113-51470159)
chr1 (16-76)||(5348160-5348221)
chr1 (16-73)||(21771040-21771097)
chr1 (16-61)||(23889689-23889734)
chr1 (16-71)||(33573881-33573938)
chr1 (21-78)||(46136081-46136138)
chr1 (41-73)||(13903396-13903428)
chr1 (16-60)||(22387158-22387202)
chr1 (21-73)||(26399179-26399231)
chr1 (17-61)||(26486770-26486814)
chr1 (21-73)||(32131908-32131960)
chr1 (25-73)||(47022078-47022126)
chr1 (16-70)||(2059425-2059480)
chr1 (16-74)||(18458566-18458625)
chr1 (16-71)||(21853418-21853473)
chr1 (20-75)||(35034299-35034354)
chr1 (18-73)||(38742383-38742438)
chr1 (35-73)||(10027996-10028034)
chr1 (16-73)||(14625370-14625428)
chr1 (16-73)||(28724529-28724587)
chr1 (35-73)||(28797380-28797418)
chr1 (15-73)||(35979583-35979641)
chr1 (16-77)||(52083576-52083638)
chr1 (15-71)||(1825296-1825353)
chr1 (17-73)||(13545579-13545636)
chr1 (22-83)||(21853550-21853611)
chr1 (17-73)||(25235774-25235831)
chr1 (16-73)||(28724325-28724382)
chr1 (16-74)||(28797158-28797218)
chr1 (17-74)||(37847772-37847829)
chr1 (16-61)||(39160446-39160491)
chr1 (41-78)||(43635830-43635867)
chr1 (16-61)||(52413133-52413178)
chr1 (24-60)||(163416-163452)
chr1 (43-75)||(2059195-2059227)
chr1 (36-72)||(4647893-4647929)
chr1 (22-78)||(6607168-6607224)
chr1 (41-73)||(9439427-9439459)
chr1 (26-78)||(16087385-16087437)
chr1 (22-78)||(25601924-25601980)
chr1 (41-73)||(26095814-26095846)
chr1 (41-73)||(26097052-26097084)
chr1 (16-56)||(26486739-26486779)
chr1 (41-77)||(31648611-31648647)
chr1 (22-62)||(34748057-34748097)
[»] chr2 (65 HSPs)
chr2 (15-73)||(22116155-22116213)
chr2 (15-73)||(20182264-20182322)
chr2 (16-83)||(29640753-29640820)
chr2 (16-74)||(12028197-12028255)
chr2 (16-74)||(28149666-28149724)
chr2 (32-78)||(29835097-29835143)
chr2 (23-77)||(33641128-33641182)
chr2 (16-78)||(38625135-38625197)
chr2 (20-73)||(37147551-37147604)
chr2 (22-78)||(34635701-34635757)
chr2 (15-73)||(85439-85498)
chr2 (22-73)||(17328092-17328143)
chr2 (22-84)||(18665664-18665727)
chr2 (16-74)||(19641445-19641504)
chr2 (16-74)||(19840038-19840097)
chr2 (16-75)||(37200345-37200403)
chr2 (23-61)||(10374151-10374189)
chr2 (27-73)||(19493459-19493505)
chr2 (16-73)||(34635942-34636000)
chr2 (24-73)||(85678-85726)
chr2 (16-73)||(22535454-22535511)
chr2 (23-72)||(33941179-33941228)
chr2 (23-76)||(40321644-40321697)
chr2 (21-73)||(3364566-3364618)
chr2 (16-60)||(9419514-9419558)
chr2 (24-72)||(10851699-10851747)
chr2 (17-61)||(14793456-14793500)
chr2 (16-72)||(22535683-22535739)
chr2 (17-61)||(24952056-24952100)
chr2 (16-72)||(41089156-41089212)
chr2 (17-77)||(43301876-43301936)
chr2 (22-73)||(758751-758802)
chr2 (16-73)||(7894199-7894258)
chr2 (15-77)||(20182492-20182555)
chr2 (18-73)||(26270491-26270545)
chr2 (22-73)||(30371385-30371436)
chr2 (27-78)||(39227084-39227135)
chr2 (27-73)||(776603-776649)
chr2 (16-78)||(5558452-5558514)
chr2 (17-55)||(10374342-10374380)
chr2 (16-73)||(23835771-23835829)
chr2 (17-78)||(25077423-25077484)
chr2 (16-73)||(41101009-41101067)
chr2 (16-73)||(6468058-6468115)
chr2 (16-61)||(7327780-7327825)
chr2 (16-73)||(16139116-16139173)
chr2 (41-78)||(16577372-16577409)
chr2 (16-61)||(24951916-24951961)
chr2 (41-70)||(28141691-28141720)
chr2 (15-60)||(32596595-32596640)
chr2 (18-75)||(38358493-38358550)
chr2 (35-72)||(38385936-38385973)
chr2 (16-60)||(5558235-5558279)
chr2 (16-60)||(14793265-14793309)
chr2 (41-73)||(15747751-15747783)
chr2 (17-72)||(16670500-16670556)
chr2 (16-60)||(22552518-22552562)
chr2 (22-74)||(22846012-22846064)
chr2 (22-70)||(27866426-27866474)
chr2 (35-71)||(30371615-30371651)
chr2 (35-75)||(31989348-31989388)
chr2 (41-73)||(38937533-38937565)
chr2 (15-55)||(40321446-40321486)
chr2 (20-76)||(43302117-43302173)
chr2 (16-60)||(45632556-45632600)
[»] chr4 (54 HSPs)
chr4 (16-73)||(21780122-21780179)
chr4 (16-73)||(50138488-50138546)
chr4 (16-76)||(21798565-21798625)
chr4 (17-72)||(2921775-2921829)
chr4 (16-73)||(5401761-5401820)
chr4 (16-74)||(5401997-5402056)
chr4 (15-73)||(22272930-22272989)
chr4 (16-90)||(46094239-46094314)
chr4 (16-78)||(50719908-50719971)
chr4 (16-73)||(18320695-18320753)
chr4 (16-73)||(50881421-50881479)
chr4 (16-74)||(51965371-51965429)
chr4 (22-78)||(7272261-7272318)
chr4 (22-83)||(49300727-49300788)
chr4 (34-74)||(550672-550712)
chr4 (16-60)||(14946274-14946318)
chr4 (27-78)||(19875981-19876033)
chr4 (22-73)||(21246476-21246528)
chr4 (15-78)||(25244674-25244738)
chr4 (17-73)||(54130533-54130589)
chr4 (24-78)||(3525875-3525930)
chr4 (15-73)||(6439185-6439244)
chr4 (15-73)||(24215739-24215798)
chr4 (16-71)||(27579516-27579571)
chr4 (35-73)||(11563536-11563574)
chr4 (16-73)||(16493518-16493576)
chr4 (35-73)||(20125437-20125475)
chr4 (43-73)||(20962194-20962224)
chr4 (24-78)||(27626990-27627044)
chr4 (35-73)||(37273414-37273452)
chr4 (21-78)||(4431287-4431344)
chr4 (16-61)||(5420249-5420294)
chr4 (27-72)||(21994328-21994373)
chr4 (16-61)||(28292283-28292328)
chr4 (16-61)||(35370388-35370433)
chr4 (16-61)||(36405671-36405716)
chr4 (16-61)||(36405853-36405898)
chr4 (16-61)||(46360893-46360938)
chr4 (17-73)||(54554383-54554440)
chr4 (15-74)||(7913428-7913488)
chr4 (16-60)||(13780413-13780457)
chr4 (16-83)||(16588971-16589039)
chr4 (16-73)||(21246709-21246768)
chr4 (35-82)||(21780374-21780422)
chr4 (16-60)||(22451946-22451990)
chr4 (15-78)||(27579742-27579806)
chr4 (16-60)||(28292066-28292110)
chr4 (41-73)||(29248242-29248274)
chr4 (15-62)||(31110481-31110529)
chr4 (16-60)||(42861614-42861658)
chr4 (17-73)||(48029415-48029471)
chr4 (15-51)||(51353246-51353282)
chr4 (41-73)||(51754225-51754257)
chr4 (16-60)||(52264458-52264502)
[»] chr7 (67 HSPs)
chr7 (16-78)||(13279416-13279479)
chr7 (15-77)||(39580165-39580227)
chr7 (16-72)||(45163914-45163970)
chr7 (15-78)||(3307675-3307738)
chr7 (22-73)||(33757410-33757461)
chr7 (21-72)||(44568849-44568900)
chr7 (16-75)||(48104728-48104787)
chr7 (15-73)||(1831978-1832036)
chr7 (16-74)||(23371448-23371506)
chr7 (16-72)||(13797610-13797667)
chr7 (16-90)||(5766621-5766696)
chr7 (16-78)||(5909708-5909771)
chr7 (35-78)||(38193213-38193256)
chr7 (25-78)||(14079005-14079059)
chr7 (25-78)||(14389033-14389087)
chr7 (16-74)||(15037256-15037314)
chr7 (23-73)||(24845638-24845688)
chr7 (27-73)||(31186668-31186714)
chr7 (16-73)||(38192962-38193020)
chr7 (16-70)||(39065386-39065440)
chr7 (16-74)||(42202160-42202218)
chr7 (16-73)||(44569077-44569135)
chr7 (24-73)||(6269528-6269577)
chr7 (16-73)||(9915651-9915708)
chr7 (16-73)||(9923563-9923620)
chr7 (16-68)||(13286635-13286688)
chr7 (24-73)||(19272457-19272506)
chr7 (16-73)||(23784584-23784641)
chr7 (16-61)||(30335382-30335427)
chr7 (16-61)||(35097601-35097646)
chr7 (16-73)||(38192596-38192653)
chr7 (34-78)||(8174879-8174923)
chr7 (16-72)||(21298015-21298071)
chr7 (17-73)||(24233611-24233667)
chr7 (16-73)||(3402119-3402178)
chr7 (27-70)||(29141168-29141211)
chr7 (16-70)||(2301140-2301194)
chr7 (28-73)||(12180846-12180892)
chr7 (27-73)||(20164434-20164480)
chr7 (16-73)||(21444182-21444240)
chr7 (16-77)||(22335518-22335580)
chr7 (16-74)||(24000639-24000697)
chr7 (15-73)||(24555900-24555958)
chr7 (27-73)||(26050175-26050221)
chr7 (27-73)||(26059534-26059580)
chr7 (16-78)||(45639724-45639786)
chr7 (21-78)||(2300817-2300874)
chr7 (16-73)||(16902337-16902393)
chr7 (43-76)||(19979648-19979681)
chr7 (16-73)||(19979878-19979935)
chr7 (16-72)||(23371679-23371736)
chr7 (16-77)||(23806225-23806286)
chr7 (16-73)||(24478024-24478081)
chr7 (16-61)||(28000118-28000163)
chr7 (23-60)||(29140997-29141034)
chr7 (16-61)||(32946570-32946615)
chr7 (33-73)||(442869-442909)
chr7 (41-73)||(1594149-1594181)
chr7 (21-73)||(1830812-1830864)
chr7 (16-74)||(3401800-3401860)
chr7 (41-73)||(9553400-9553432)
chr7 (25-73)||(10980605-10980653)
chr7 (21-73)||(12005264-12005316)
chr7 (34-73)||(21811415-21811455)
chr7 (16-56)||(24374285-24374325)
chr7 (16-75)||(35158181-35158241)
chr7 (16-60)||(43596330-43596374)
[»] scaffold0010 (1 HSPs)
scaffold0010 (21-75)||(26306-26360)
[»] chr8 (41 HSPs)
chr8 (15-73)||(27987297-27987355)
chr8 (15-73)||(28044599-28044657)
chr8 (16-73)||(3912480-3912537)
chr8 (16-73)||(30222087-30222144)
chr8 (16-74)||(960497-960555)
chr8 (16-73)||(14329599-14329657)
chr8 (16-73)||(27543411-27543469)
chr8 (16-76)||(43945166-43945227)
chr8 (35-83)||(27543644-27543692)
chr8 (16-78)||(3912251-3912314)
chr8 (22-73)||(29309565-29309616)
chr8 (16-78)||(34845279-34845342)
chr8 (15-61)||(21692604-21692650)
chr8 (16-73)||(27198144-27198202)
chr8 (16-78)||(34985322-34985384)
chr8 (16-77)||(23428732-23428793)
chr8 (22-74)||(18367025-18367077)
chr8 (16-60)||(23428937-23428981)
chr8 (25-73)||(25277715-25277763)
chr8 (16-72)||(28561435-28561491)
chr8 (16-72)||(28566933-28566989)
chr8 (22-73)||(29309780-29309831)
chr8 (17-75)||(3785523-3785581)
chr8 (15-73)||(4482045-4482103)
chr8 (16-73)||(12330333-12330391)
chr8 (43-73)||(12330590-12330620)
chr8 (16-73)||(13572540-13572598)
chr8 (16-78)||(15935382-15935444)
chr8 (16-73)||(40702009-40702067)
chr8 (15-75)||(2270289-2270350)
chr8 (16-73)||(2873765-2873822)
chr8 (16-73)||(9513828-9513885)
chr8 (16-72)||(27164657-27164714)
chr8 (16-78)||(5566477-5566541)
chr8 (16-56)||(11105788-11105828)
chr8 (16-56)||(21692416-21692456)
chr8 (16-78)||(27637385-27637449)
chr8 (42-78)||(27987552-27987588)
chr8 (42-78)||(28044854-28044890)
chr8 (16-72)||(40411399-40411455)
chr8 (35-71)||(40652621-40652657)
[»] chr5 (41 HSPs)
chr5 (16-73)||(10976747-10976804)
chr5 (16-78)||(33052812-33052874)
chr5 (16-72)||(12383043-12383100)
chr5 (22-75)||(12399592-12399645)
chr5 (16-73)||(29104444-29104501)
chr5 (16-60)||(41184955-41184999)
chr5 (16-90)||(36992982-36993057)
chr5 (16-72)||(5802416-5802473)
chr5 (17-70)||(22642127-22642180)
chr5 (23-83)||(40657908-40657969)
chr5 (28-76)||(2870896-2870944)
chr5 (34-78)||(22551517-22551561)
chr5 (42-81)||(11664278-11664317)
chr5 (16-73)||(711237-711295)
chr5 (16-73)||(15061822-15061880)
chr5 (16-73)||(25962802-25962860)
chr5 (16-73)||(33659105-33659163)
chr5 (16-73)||(39153416-39153474)
chr5 (23-76)||(39418958-39419012)
chr5 (16-76)||(4561600-4561661)
chr5 (16-61)||(4633772-4633817)
chr5 (22-71)||(5700669-5700718)
chr5 (21-78)||(9672892-9672949)
chr5 (15-73)||(10976539-10976598)
chr5 (41-78)||(11438334-11438371)
chr5 (16-73)||(16920656-16920713)
chr5 (22-78)||(29754043-29754100)
chr5 (22-83)||(31920050-31920111)
chr5 (35-75)||(33053065-33053106)
chr5 (16-83)||(35599302-35599371)
chr5 (41-73)||(15615103-15615135)
chr5 (27-71)||(16305120-16305164)
chr5 (16-68)||(20688801-20688853)
chr5 (16-84)||(28593524-28593592)
chr5 (22-78)||(30916478-30916534)
chr5 (21-73)||(31861491-31861543)
chr5 (25-73)||(35798692-35798740)
chr5 (26-78)||(37204990-37205042)
chr5 (16-79)||(37217519-37217583)
chr5 (41-73)||(38482318-38482350)
chr5 (16-60)||(41254391-41254435)
[»] chr3 (49 HSPs)
chr3 (16-73)||(49872949-49873006)
chr3 (16-73)||(53806796-53806853)
chr3 (26-78)||(47115572-47115624)
chr3 (16-78)||(3548355-3548418)
chr3 (16-78)||(26769916-26769979)
chr3 (23-73)||(6510215-6510265)
chr3 (16-72)||(7272813-7272869)
chr3 (16-60)||(16897405-16897449)
chr3 (16-75)||(20956941-20957001)
chr3 (16-78)||(8355566-8355629)
chr3 (16-73)||(25110060-25110118)
chr3 (15-73)||(27497799-27497857)
chr3 (16-73)||(36867856-36867914)
chr3 (22-78)||(7118082-7118139)
chr3 (25-78)||(19598917-19598970)
chr3 (16-72)||(29313789-29313846)
chr3 (24-61)||(30451539-30451576)
chr3 (22-75)||(49880743-49880796)
chr3 (15-78)||(10615270-10615334)
chr3 (25-73)||(13439629-13439677)
chr3 (16-60)||(19301192-19301236)
chr3 (15-73)||(18464953-18465012)
chr3 (41-80)||(46597533-46597572)
chr3 (34-73)||(51460781-51460820)
chr3 (17-78)||(28208145-28208207)
chr3 (22-56)||(31073582-31073616)
chr3 (16-73)||(37977505-37977563)
chr3 (16-78)||(39846580-39846642)
chr3 (17-74)||(46610008-46610066)
chr3 (41-75)||(54567768-54567802)
chr3 (16-69)||(12767166-12767219)
chr3 (24-73)||(14241214-14241263)
chr3 (23-76)||(14248821-14248874)
chr3 (42-71)||(24910957-24910986)
chr3 (16-73)||(27760289-27760346)
chr3 (22-75)||(31073688-31073741)
chr3 (24-72)||(31797543-31797592)
chr3 (16-76)||(41749383-41749444)
chr3 (16-61)||(48418666-48418711)
chr3 (16-61)||(48489019-48489064)
chr3 (20-72)||(9777645-9777697)
chr3 (25-73)||(19624019-19624067)
chr3 (35-71)||(22949248-22949284)
chr3 (25-73)||(25024539-25024587)
chr3 (34-78)||(31172294-31172338)
chr3 (16-72)||(31293769-31293825)
chr3 (34-78)||(33898068-33898112)
chr3 (24-76)||(43772854-43772905)
chr3 (41-73)||(46596095-46596127)
[»] scaffold0384 (2 HSPs)
scaffold0384 (16-76)||(4428-4487)
scaffold0384 (16-73)||(4249-4306)
[»] chr6 (39 HSPs)
chr6 (16-76)||(13114395-13114455)
chr6 (18-73)||(33751924-33751980)
chr6 (17-72)||(34715905-34715960)
chr6 (24-73)||(22362945-22362994)
chr6 (16-72)||(31851992-31852049)
chr6 (17-73)||(29942444-29942500)
chr6 (22-77)||(31116475-31116530)
chr6 (22-73)||(31851758-31851809)
chr6 (16-73)||(10545831-10545889)
chr6 (15-77)||(24387760-24387822)
chr6 (17-78)||(6000672-6000733)
chr6 (21-74)||(10344049-10344102)
chr6 (21-73)||(5999717-5999769)
chr6 (16-71)||(13114624-13114680)
chr6 (16-75)||(14328645-14328705)
chr6 (16-75)||(14421655-14421715)
chr6 (16-72)||(19325614-19325670)
chr6 (23-74)||(7922316-7922367)
chr6 (25-75)||(25400786-25400837)
chr6 (16-75)||(33352615-33352674)
chr6 (27-73)||(56123-56169)
chr6 (19-61)||(25562166-25562208)
chr6 (19-61)||(26101680-26101722)
chr6 (27-73)||(32614172-32614218)
chr6 (16-77)||(3593572-3593633)
chr6 (16-73)||(16659514-16659571)
chr6 (32-73)||(22574046-22574087)
chr6 (16-77)||(27967462-27967523)
chr6 (24-60)||(2033106-2033142)
chr6 (41-73)||(3063508-3063540)
chr6 (34-78)||(7313446-7313490)
chr6 (16-56)||(8237657-8237697)
chr6 (16-60)||(10546179-10546223)
chr6 (35-71)||(10827057-10827093)
chr6 (16-60)||(14924977-14925020)
chr6 (16-60)||(14985308-14985352)
chr6 (24-75)||(17884079-17884131)
chr6 (25-73)||(22366227-22366275)
chr6 (27-75)||(23270220-23270268)
[»] scaffold0142 (2 HSPs)
scaffold0142 (16-75)||(34826-34885)
scaffold0142 (16-73)||(34569-34627)
[»] scaffold0769 (2 HSPs)
scaffold0769 (22-78)||(4157-4213)
scaffold0769 (16-73)||(3914-3972)
[»] scaffold0002 (3 HSPs)
scaffold0002 (16-60)||(332078-332122)
scaffold0002 (25-73)||(432395-432443)
scaffold0002 (22-74)||(332389-332441)
[»] scaffold0450 (2 HSPs)
scaffold0450 (16-78)||(7854-7916)
scaffold0450 (16-73)||(8095-8152)
[»] scaffold0032 (1 HSPs)
scaffold0032 (15-73)||(91050-91108)
[»] scaffold0019 (1 HSPs)
scaffold0019 (16-60)||(174603-174647)
[»] scaffold0004 (1 HSPs)
scaffold0004 (22-74)||(212512-212564)
[»] scaffold0192 (1 HSPs)
scaffold0192 (22-61)||(14453-14492)
[»] scaffold0031 (1 HSPs)
scaffold0031 (35-74)||(1826-1865)
[»] scaffold0250 (1 HSPs)
scaffold0250 (16-73)||(10080-10138)
[»] scaffold0079 (1 HSPs)
scaffold0079 (16-73)||(6810-6868)
[»] scaffold0258 (1 HSPs)
scaffold0258 (16-73)||(18643-18700)
[»] scaffold0068 (1 HSPs)
scaffold0068 (17-78)||(38607-38668)
[»] scaffold0136 (1 HSPs)
scaffold0136 (22-78)||(642-698)
[»] scaffold0111 (1 HSPs)
scaffold0111 (16-60)||(29683-29727)
[»] scaffold0012 (1 HSPs)
scaffold0012 (22-78)||(53367-53423)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-56)||(150004-150044)


Alignment Details
Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 267
Target Start/End: Original strand, 30434479 - 30434731
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacaggggg-taaagatctattaacccaaaaagaaaatattattcttttaacaaagattttatatttt 114  Q
    |||||||| ||||||  ||||||| | ||||||||| |||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  30434479 tttacaggaggaaaactgaaaatgacatatattacatggggataaagatctattaaccctaaaagaaaatattgttctttcaacaaagattttatatttt 30434578  T
Q  115 gattaaattttgaattccatgtccactaacacccgaacaaaatgagcaaaagttctatcaggtattaacttatttgtggtagaaacagtgcatatttggt 214  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30434579 gattaaattttgagttccatgtccactaacacccgaacaaaatgagcaaaagttctatcaggtattaacttatttgtggtagaaatagtgcatatttggt 30434678  T
Q  215 accaatactttctttaaaagcaaaaagtatcttcgctctccgatgatcttctg 267  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30434679 accaatattttctttaaaagcaaaaagtatcttcgctctccgatgatcttctg 30434731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 30273188 - 30273287
Alignment:
Q  75 aaaagaaaatattattcttttaacaaagattttatattttgattaaattttgaattccatgtccactaacacccgaacaaaatgagcaaaagttctatca 174  Q
    ||||||||||||| |||| |  |||| |||||||||||||| || ||||||||  ||||| |||||||||||||||||||||||| ||||||||||||||    
T  30273188 aaaagaaaatattgttctctccacaaggattttatattttggttcaattttgagctccatatccactaacacccgaacaaaatgaccaaaagttctatca 30273287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 2472589 - 2472640
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    ||||||||||||||||||  |||||||||||||||||||||| |||||||||    
T  2472589 agggggaaaatcgaaaataacctatattacagggggtaaagacctattaacc 2472640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 8620191 - 8620250
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattaca-gggggtaaagatctattaaccc 73  Q
    |||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||    
T  8620191 atttacagggggaaaaccggaaatgacctatattacaggggggtaaagatctattaaccc 8620250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 15336433 - 15336370
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||| |||| | |||||| |||||||||||||||||||||| ||||||| |||||||    
T  15336433 atttacaggggaaaaaccaaaaatgacctatattacagggggtaaagacctattaatccaaaaa 15336370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 42736821 - 42736880
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    ||||||||||||||| || ||||| ||||||||||||||| |||||| ||||||||||||    
T  42736821 tttacagggggaaaaccggaaatgacctatattacaggggataaagacctattaacccaa 42736880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 33645066 - 33645004
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaagaaaa 83  Q
    ||||| |||||| ||| || |||||||||||||||||||||||||| ||||||||||| ||||    
T  33645066 aggggcaaaatcaaaagtgacctatattacagggggtaaagatctaataacccaaaaaaaaaa 33645004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 8928872 - 8928799
Alignment:
Q  17 ttacaggggg-aaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaagaaaatattat 89  Q
    |||||||||| |||||| ||| || | |||||||||||||||||||| |||||||||| |||| ||||||||||    
T  8928872 ttacagggggcaaaatcaaaagtgccttatattacagggggtaaagacctattaaccctaaaataaaatattat 8928799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 18458802 - 18458859
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||| |||||| || ||||| |||||||||||||||||||||| ||||||||||    
T  18458802 tttacaggaggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 18458859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 24987665 - 24987608
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| |||| || ||||| |||||||||||||||||||||| ||||||||||    
T  24987665 tttacaggggaaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 24987608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 7112552 - 7112492
Alignment:
Q  16 tttacagggggaaaatc-gaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    ||||||||||||||| | ||||||| | |||||||||||||||||||| ||||||||||||    
T  7112552 tttacagggggaaaaaccgaaaatgacatatattacagggggtaaagacctattaacccaa 7112492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 34748279 - 34748339
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagg-gggtaaagatctattaacccaa 75  Q
    |||||||||||||||  ||| ||| ||||||||||||| ||||||||||||||||||||||    
T  34748279 tttacagggggaaaactgaagatgacctatattacaggagggtaaagatctattaacccaa 34748339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 7454946 - 7454884
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||| |||||||||  |||||| |||||||||||||||||||||  | |||||||||||||    
T  7454946 tttacaaggggaaaataaaaaatgacctatattacagggggtaaagcaccattaacccaaaaa 7454884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 28410960 - 28410914
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||||    
T  28410960 aaaatcgaaaatgacctatattacaggggataaagacctattaaccc 28410914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 44200385 - 44200327
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| |||||| | |||||||||||||||||| |||||||||| ||||||||||    
T  44200385 tttacagggtggaaaaccaaaaatggcctatattacaaggggtaaagacctattaaccc 44200327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 44826138 - 44826076
Alignment:
Q  17 ttacagggg-gaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| ||||| |||||||| ||| ||||||||||||||||||  ||||||||||||||    
T  44826138 ttacaggggagaaaaccgaaaatgacctctattacagggggtaaagacttattaacccaaaaa 44826076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 51470159 - 51470113
Alignment:
Q  43 tatattacagggggtaaagatctattaacccaaaaagaaaatattat 89  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  51470159 tatattacagggggtaaagacctattaacccaaaaaaaaattattat 51470113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 5348221 - 5348160
Alignment:
Q  16 tttacagggg-gaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaa 76  Q
    |||||||||| || ||||| ||||| |||||||||||| ||||||||| |||||||||||||    
T  5348221 tttacaggggtgacaatcggaaatgacctatattacagagggtaaagacctattaacccaaa 5348160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 21771040 - 21771097
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| ||| || ||||| |||||||||||||||||||||  ||||||||||    
T  21771040 tttacaggggggaaaccggaaatgacctatattacagggggtaaagcactattaaccc 21771097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 23889734 - 23889689
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    ||||||||||||||| || ||||| |||||||||||||||||||||    
T  23889734 tttacagggggaaaaccggaaatgacctatattacagggggtaaag 23889689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 33573881 - 33573938
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacaggg-ggtaaagatctattaac 71  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  33573881 tttacagggtggaaaatcgaaaatgacctatattacagggaggtaaagacctattaac 33573938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 46136138 - 46136081
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||   |||||| ||||||||||||||||||||||  ||||||||||||||    
T  46136138 agggggaaaacaaaaaatgacctatattacagggggtaaagacttattaacccaaaaa 46136081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 13903396 - 13903428
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||||||||||||||    
T  13903396 cctatattacagggggtaaagatctattaaccc 13903428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 22387202 - 22387158
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||| |||||||| |||||||| ||||||||||||||||||||    
T  22387202 tttacaaggggaaaaccgaaaatgacctatattacagggggtaaa 22387158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 26399179 - 26399231
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||| ||||||||||||| ||||||||||||||||||||   ||||||||||    
T  26399179 aggggtaaaatcgaaaatgacctatattacagggggtaaaacactattaaccc 26399231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 26486770 - 26486814
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||||||||||||||  |||||| |||||||||||||||||||||    
T  26486770 ttacagggggaaaataaaaaatgacctatattacagggggtaaag 26486814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 32131908 - 32131960
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||| |||| ||||| || |||||||||||||||||||||| ||||||||||    
T  32131908 aggggcaaaaccgaaagtgacctatattacagggggtaaagacctattaaccc 32131960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 47022078 - 47022126
Alignment:
Q  25 ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||  ||||| |||||||||||||||||||||| ||||||||||    
T  47022078 ggaaaatcataaatgacctatattacagggggtaaagacctattaaccc 47022126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 2059425 - 2059480
Alignment:
Q  16 tttacagg-gggaaaatcgaaaatggcctatattacagggggtaaagatctattaa 70  Q
    |||||||| |||||||||  ||||| |||||||||||||||||||||| |||||||    
T  2059425 tttacaggagggaaaatcagaaatgacctatattacagggggtaaagacctattaa 2059480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 18458625 - 18458566
Alignment:
Q  16 tttacagg-gggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    |||||||| ||||||||| |||||| | |||||||||||||||||||| || ||||||||    
T  18458625 tttacaggagggaaaatcaaaaatgacatatattacagggggtaaagacctcttaaccca 18458566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 21853473 - 21853418
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaac 71  Q
    |||||||| |||||| |  ||||| |||||||||||||||||||||| ||||||||    
T  21853473 tttacaggaggaaaaccagaaatgacctatattacagggggtaaagacctattaac 21853418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 35034299 - 35034354
Alignment:
Q  20 cagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    ||||| ||||| || ||||| ||||||||||||||| |||||| ||||||||||||    
T  35034299 cagggagaaaaccggaaatgacctatattacaggggataaagacctattaacccaa 35034354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 38742383 - 38742438
Alignment:
Q  18 tacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||| |||||| ||| |  ||||||||||||||||||||| |||||||||||    
T  38742383 tacaggggcaaaatcaaaagtaccctatattacagggggtaaagctctattaaccc 38742438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 10027996 - 10028034
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  10027996 aaatgacctatattacagggggtaaagacctattaaccc 10028034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 14625428 - 14625370
Alignment:
Q  16 tttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| ||| | |||| || |||||||||||||||||||||| ||||||||||    
T  14625428 tttacagggggcaaaaccaaaagtgtcctatattacagggggtaaagacctattaaccc 14625370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 28724529 - 28724587
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| |||||| |||||||| | ||||||| |||||||||||| ||||||||||    
T  28724529 tttacagggtggaaaaccgaaaatgacatatattagagggggtaaagacctattaaccc 28724587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 28797380 - 28797418
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  28797380 aaatgacctatattacagggggtaaagatttattaaccc 28797418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 35979583 - 35979641
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| |||||| ||| || | |||||||||||||| ||||| ||||||||||    
T  35979583 atttacaggggcaaaatcaaaagtgacttatattacagggggaaaagacctattaaccc 35979641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 52083638 - 52083576
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacaggggg-taaagatctattaacccaaaa 77  Q
    |||||| ||| |||| | |||||| |||||||||||||||| |||||| ||||||||||||||    
T  52083638 tttacaagggcaaaaccaaaaatgccctatattacaggggggtaaagacctattaacccaaaa 52083576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 1825353 - 1825296
Alignment:
Q  15 atttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaac 71  Q
    |||||||||||| ||| | |||| || |||||||||||||||||||||| ||||||||    
T  1825353 atttacagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaac 1825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 13545636 - 13545579
Alignment:
Q  17 ttacagggggaaaatc-gaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||| | | ||||| | |||||||||||||||||||| ||||||||||    
T  13545636 ttacagggggaaaaaccggaaatgacatatattacagggggtaaagacctattaaccc 13545579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 21853611 - 21853550
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaagaaaa 83  Q
    ||||||||| || ||||| ||||||||| ||||||||||   ||||||||||||||| ||||    
T  21853611 gggggaaaaccggaaatgacctatattatagggggtaaaacactattaacccaaaaaaaaaa 21853550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 25235831 - 25235774
Alignment:
Q  17 ttacagggggaaaatc-gaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||   |||| || |||||||||||||||||||||| ||||||||||    
T  25235831 ttacagggggaaaaaatgaaattgacctatattacagggggtaaagacctattaaccc 25235774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 28724382 - 28724325
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||| ||||||| |  ||||| ||||| |||||||||||||||| ||||||||||    
T  28724382 tttacagagggaaaaccagaaatgacctattttacagggggtaaagacctattaaccc 28724325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 28797218 - 28797158
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattac--agggggtaaagatctattaaccca 74  Q
    ||||||||| ||||| || ||||| ||||||||||  |||||||||||| |||||||||||    
T  28797218 tttacagggagaaaaccggaaatgacctatattacagagggggtaaagacctattaaccca 28797158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 37847772 - 37847829
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    ||||||||||||||   |||||| |||||||||||||||||||||  | |||||||||    
T  37847772 ttacagggggaaaacaaaaaatgacctatattacagggggtaaagcaccattaaccca 37847829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 39160491 - 39160446
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    ||||||||||||||| | |||||| ||||||| |||||||||||||    
T  39160491 tttacagggggaaaaccaaaaatgacctatatgacagggggtaaag 39160446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 43635867 - 43635830
Alignment:
Q  41 cctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  43635867 cctatattacagggggtaaagacctattaaccctaaaa 43635830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 52413178 - 52413133
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    ||||||||||| ||| | |||||| |||||||||||||||||||||    
T  52413178 tttacaggggggaaaccaaaaatgacctatattacagggggtaaag 52413133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 163452 - 163416
Alignment:
Q  24 gggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  163452 gggaaaaccgaaaatgacctatattacagggggtaaa 163416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 2059227 - 2059195
Alignment:
Q  43 tatattacagggggtaaagatctattaacccaa 75  Q
    ||||||||||||||||||| |||||||||||||    
T  2059227 tatattacagggggtaaagttctattaacccaa 2059195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 4647893 - 4647929
Alignment:
Q  36 aatggcctatattacagggggtaaagatctattaacc 72  Q
    |||| |||||||||||| |||||||||||||||||||    
T  4647893 aatgacctatattacagagggtaaagatctattaacc 4647929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 6607224 - 6607168
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| | |||||||| ||||||||||| |||||||  | |||||||||||||    
T  6607224 gggggaaaaccaaaaatggcatatattacaggaggtaaagcaccattaacccaaaaa 6607168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 9439427 - 9439459
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||| ||||||||||    
T  9439427 cctatattacagggggtaaagacctattaaccc 9439459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 16087385 - 16087437
Alignment:
Q  26 gaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||||||||||| | |||||||||||| | ||||  |||||||||||||||    
T  16087385 gaaaatcgaaaatgacatatattacagggtgaaaagcactattaacccaaaaa 16087437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 25601924 - 25601980
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| | ||| || |||||||| ||||||||||||  |||||||||||||||    
T  25601924 gggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaacccaaaaa 25601980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 26095846 - 26095814
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||| ||||||||||    
T  26095846 cctatattacagggggtaaagacctattaaccc 26095814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 26097052 - 26097084
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||| ||||||||||    
T  26097052 cctatattacagggggtaaagacctattaaccc 26097084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 26486739 - 26486779
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacaggggg 56  Q
    ||||||||||||||||  |||||| ||||||||||||||||    
T  26486739 tttacagggggaaaataaaaaatgacctatattacaggggg 26486779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 31648611 - 31648647
Alignment:
Q  41 cctatattacagggggtaaagatctattaacccaaaa 77  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  31648611 cctatattacagggggtaaaggtctattaacctaaaa 31648647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 34748097 - 34748057
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaaga 62  Q
    |||||||||||| ||||| |||||||||||||| |||||||    
T  34748097 gggggaaaatcggaaatgacctatattacagggagtaaaga 34748057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 22116213 - 22116155
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  22116213 atttacagggggaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 22116155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 20182322 - 20182264
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||||||    
T  20182322 atttacagggggaaaatcgaaaatgacctatattacaggggataaaaacctattaaccc 20182264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 29640820 - 29640753
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaagaaaa 83  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||  | ||||||||||||| ||||    
T  29640820 tttacagggggaaaaccaaaaatgacctatattacagggggtaaagcaccattaacccaaaaaaaaaa 29640753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 12028255 - 12028197
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    |||||||||| |||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  12028255 tttacaggggaaaaatcaaaaatgacctatattacagggtgtaaagacctattaaccca 12028197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 28149666 - 28149724
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    ||||||||||||||| || ||||| |||||||||||||||||||| | |||||||||||    
T  28149666 tttacagggggaaaaccggaaatgacctatattacagggggtaaaaacctattaaccca 28149724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 29835143 - 29835097
Alignment:
Q  32 cgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||    
T  29835143 cgaaaatgacctatattacagggggtaaagacctattaacccaaaaa 29835097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 33641182 - 33641128
Alignment:
Q  23 ggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaa 77  Q
    |||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||    
T  33641182 ggggaaaaccgaaaatgacctatattacagagggtaaagacctattaacccaaaa 33641128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 38625135 - 38625197
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| |||||||  ||||| | ||||||||||||||||||||||||||||||| ||||    
T  38625135 tttacagggagaaaatcagaaatgacatatattacagggggtaaagatctattaaccctaaaa 38625197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 37147604 - 37147551
Alignment:
Q  20 cagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| || ||||| |||||||||||||||||||||| ||||||||||    
T  37147604 cagggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 37147551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 34635757 - 34635701
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| || ||||| |||||||||||||||||||||| |||||||||| ||||    
T  34635757 gggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccctaaaa 34635701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 85498 - 85439
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattac-agggggtaaagatctattaaccc 73  Q
    ||||||||||| |||| |||||||| |||||||||| |||||||||||| ||||||||||    
T  85498 atttacaggggaaaaaccgaaaatgacctatattacaagggggtaaagacctattaaccc 85439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 17328143 - 17328092
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| || ||||| |||||||||||||||||||||| ||||||||||    
T  17328143 gggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 17328092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 18665727 - 18665664
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattac-agggggtaaagatctattaacccaaaaagaaaat 84  Q
    |||||||||||||||||| |||||||||| |||||||||||| ||||||||  ||||| |||||    
T  18665727 gggggaaaatcgaaaatgacctatattacaagggggtaaagacctattaacaaaaaaaaaaaat 18665664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 19641504 - 19641445
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    ||||||||| |||||| || ||||| |||||||||||||||||||||| |||||||||||    
T  19641504 tttacagggtggaaaaccggaaatgacctatattacagggggtaaagacctattaaccca 19641445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 19840097 - 19840038
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    ||||||||| |||||| || ||||| |||||||||||||||||||||| |||||||||||    
T  19840097 tttacagggtggaaaaccggaaatgacctatattacagggggtaaagacctattaaccca 19840038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 37200403 - 37200345
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    |||||||| |||||| |||||||| ||||||||||| |||||||||| ||||||||||||    
T  37200403 tttacaggaggaaaaccgaaaatgacctatattaca-ggggtaaagacctattaacccaa 37200345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 10374189 - 10374151
Alignment:
Q  23 ggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  10374189 ggggaaaatcgaaaatgacctatattacagggggtaaag 10374151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 19493459 - 19493505
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||||    
T  19493459 aaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 19493505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 34635942 - 34636000
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattaca-gggggtaaagatctattaaccc 73  Q
    ||||||||||||||| || ||||| ||||||||||| ||||||||||| ||||||||||    
T  34635942 tttacagggggaaaaccggaaatgacctatattacaggggggtaaagacctattaaccc 34636000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 85678 - 85726
Alignment:
Q  24 gggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  85678 gggaaaatcgaaaatgacctatattaca-ggggtaaagacctattaaccc 85726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 22535511 - 22535454
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||| ||| |||| |||||||| ||||||||| |||||||||||| ||||||||||    
T  22535511 tttacaagggaaaaaccgaaaatgacctatattaaagggggtaaagacctattaaccc 22535454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 33941228 - 33941179
Alignment:
Q  23 ggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    ||||||||||| ||||| ||||||||| ||| ||||||||||||||||||    
T  33941228 ggggaaaatcggaaatgacctatattataggaggtaaagatctattaacc 33941179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 40321644 - 40321697
Alignment:
Q  23 ggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaa 76  Q
    ||||||||||||||||| ||||||||||||| |||||||  || ||||||||||    
T  40321644 ggggaaaatcgaaaatgacctatattacaggaggtaaagcacttttaacccaaa 40321697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 3364566 - 3364618
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||| |||| |||||||| | |||||||||||||||||||| ||||||||||    
T  3364566 aggggaaaaaccgaaaatgacttatattacagggggtaaagacctattaaccc 3364618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 9419558 - 9419514
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||    
T  9419558 tttacagggggaaaactgaaaatgacctatattacagggggtaaa 9419514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 10851699 - 10851747
Alignment:
Q  24 gggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    ||||||| || ||||| |||||||||||||| |||||||||||||||||    
T  10851699 gggaaaaccggaaatgacctatattacagggagtaaagatctattaacc 10851747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 14793456 - 14793500
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||||||||||||| | |||||| |||||||||||||||||||||    
T  14793456 ttacagggggaaaaccaaaaatgacctatattacagggggtaaag 14793500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 22535683 - 22535739
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    ||||||||||||||| |  ||||| ||||||||||||| |||||||| |||||||||    
T  22535683 tttacagggggaaaaccagaaatgacctatattacaggaggtaaagacctattaacc 22535739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 24952056 - 24952100
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||||||||||||| | |||||| |||||||||||||||||||||    
T  24952056 ttacagggggaaaaccaaaaatgacctatattacagggggtaaag 24952100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 41089212 - 41089156
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    |||||||||| ||||| ||||||| |||||||||||| || |||||| |||||||||    
T  41089212 tttacaggggaaaaattgaaaatgacctatattacagaggttaaagacctattaacc 41089156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 43301936 - 43301876
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaa 77  Q
    |||||||||||||  |  ||||| |||||||||||||||||||||| |||||||| |||||    
T  43301936 ttacagggggaaagccagaaatgacctatattacagggggtaaagacctattaactcaaaa 43301876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 758751 - 758802
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| || ||||| |||||||||||||||||||||  ||||||||||    
T  758751 gggggaaaaccggaaatgacctatattacagggggtaaagcactattaaccc 758802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 7894199 - 7894258
Alignment:
Q  16 tttacagg-gggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaaccc 73  Q
    |||||||| ||||||| || ||||| |||||||||||| |||||||||||||||||||||    
T  7894199 tttacaggagggaaaaccggaaatgacctatattacagaggggtaaagatctattaaccc 7894258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 20182492 - 20182555
Alignment:
Q  15 atttacagg-gggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaa 77  Q
    ||||||||| ||||||  || ||||| |||||||||| ||||||||||| ||||||||||||||    
T  20182492 atttacaggagggaaacccggaaatgacctatattacggggggtaaagacctattaacccaaaa 20182555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 26270545 - 26270491
Alignment:
Q  18 tacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||| ||||||||||||||  ||||||||||| | |||||||||||||||||||    
T  26270545 tacaggaggaaaatcgaaaataacctatattaca-gaggtaaagatctattaaccc 26270491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 30371436 - 30371385
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| | |||||| |||||||||||||| ||||||| ||||||||||    
T  30371436 gggggaaaaccaaaaatgacctatattacagggagtaaagacctattaaccc 30371385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 39227135 - 39227084
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||| ||||||||||||||| ||||  |||||||||| |||||    
T  39227135 aaaatcgaaaatgacctatattacaggggataaaagtctattaaccaaaaaa 39227084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 776603 - 776649
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||| | ||||||||||||||||||  |||||||||||    
T  776603 aaaatcgaaaatgacttatattacagggggtaaaactctattaaccc 776649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 5558452 - 5558514
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||||||||||||   |||||| ||||||||||||||| |||||  | |||||||||||||    
T  5558452 tttacagggggaaaacaaaaaatgacctatattacaggggataaagcaccattaacccaaaaa 5558514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 10374342 - 10374380
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggg 55  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  10374342 ttacaggggaaaaatcgaaaatgacctatattacagggg 10374380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 23835771 - 23835829
Alignment:
Q  16 tttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| ||| | |||| || |||||||||||||||||||||| ||||||||||    
T  23835771 tttacagggggcaaaactaaaagtgccctatattacagggggtaaagacctattaaccc 23835829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 25077484 - 25077423
Alignment:
Q  17 ttacagggg-gaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| ||||| |||||||| |||||||||||| || ||||||||||||||||| ||||    
T  25077484 ttacaggggagaaaaccgaaaatgacctatattacagagg-taaagatctattaaccctaaaa 25077423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 41101009 - 41101067
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| |||||| || ||||| |||||||||||||||||||||  ||||||||||    
T  41101009 tttacagggtggaaaaccggaaatgacctatattacagggggtaaagcactattaaccc 41101067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 6468115 - 6468058
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||| |||||||||| ||||| | |||||||||||||||||| |  |||||||||    
T  6468115 tttacagagggaaaatcggaaatgacttatattacagggggtaaaaacttattaaccc 6468058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 7327825 - 7327780
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||||||||||||||   |||||| |||||||||||||||||||||    
T  7327825 tttacagggggaaaacaaaaaatgacctatattacagggggtaaag 7327780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 16139116 - 16139173
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||   |||||| ||||||||||||||| |||||  ||||||||||    
T  16139116 tttacagggggaaaacaaaaaatgacctatattacaggggataaagcactattaaccc 16139173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 16577372 - 16577409
Alignment:
Q  41 cctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  16577372 cctatattacagggggtaaagacctattaaccctaaaa 16577409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 24951961 - 24951916
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    ||||||||||||||| | |||||| ||||||||||||||| |||||    
T  24951961 tttacagggggaaaaccaaaaatgacctatattacaggggttaaag 24951916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 70
Target Start/End: Complemental strand, 28141720 - 28141691
Alignment:
Q  41 cctatattacagggggtaaagatctattaa 70  Q
    ||||||||||||||||||||||||||||||    
T  28141720 cctatattacagggggtaaagatctattaa 28141691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 32596595 - 32596640
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||| || ||||||||||||| ||||||||| ||||||||||    
T  32596595 atttacagaggaaaaatcgaaaatgacctatattagagggggtaaa 32596640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 38358493 - 38358550
Alignment:
Q  18 tacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    |||||||||||||  | ||||| |||||||||||||||||||||  | ||||||||||    
T  38358493 tacagggggaaaactggaaatgacctatattacagggggtaaagcaccattaacccaa 38358550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 38385973 - 38385936
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaacc 72  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  38385973 aaatgacctatattacagggggtaaagacctattaacc 38385936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 5558279 - 5558235
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    ||||||||||| ||| | |||||| ||||||||||||||||||||    
T  5558279 tttacaggggggaaaccaaaaatgacctatattacagggggtaaa 5558235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 14793309 - 14793265
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    ||||||||| ||||||  |||||| ||||||||||||||||||||    
T  14793309 tttacagggagaaaataaaaaatgacctatattacagggggtaaa 14793265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 15747783 - 15747751
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||||||||| |||||||||||    
T  15747783 cctatattacagggggtaaaggtctattaaccc 15747751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 16670556 - 16670500
Alignment:
Q  17 ttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaacc 72  Q
    |||||||||| ||| | |||| || |||||||||||||||||||||| |||||||||    
T  16670556 ttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 16670500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 22552562 - 22552518
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||||||||   |||||| ||||||||||||||||||||    
T  22552562 tttacagggggaaaacaaaaaatgacctatattacagggggtaaa 22552518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 22846064 - 22846012
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    |||||| ||||||||||| | ||||||||||||||||||   |||||||||||    
T  22846064 gggggacaatcgaaaatgacttatattacagggggtaaaacactattaaccca 22846012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 27866426 - 27866474
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaa 70  Q
    |||||||||||||||| | |||||||||| |||||||| || |||||||    
T  27866426 gggggaaaatcgaaaacgacctatattacggggggtaaggacctattaa 27866474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 30371615 - 30371651
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaac 71  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  30371615 aaatgacctatattacagggggtaaagacctattaac 30371651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 31989388 - 31989348
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    ||||||||||||||||||||||||||   ||||||||||||    
T  31989388 aaatggcctatattacagggggtaaaacactattaacccaa 31989348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 38937533 - 38937565
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||| ||||||||||    
T  38937533 cctatattacagggggtaaagacctattaaccc 38937565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 40321486 - 40321446
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggg 55  Q
    |||||||| |||||||||| ||||| |||||||||||||||    
T  40321486 atttacagagggaaaatcggaaatgacctatattacagggg 40321446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 43302117 - 43302173
Alignment:
Q  20 cagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaa 76  Q
    ||||| ||||| |||||||  ||||||||||| ||| |||||| |||||||||||||    
T  43302117 cagggagaaaaccgaaaataacctatattacatgggataaagacctattaacccaaa 43302173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 45632600 - 45632556
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||||||||   |||||| ||||||||||||||||||||    
T  45632600 tttacagggggaaaacaaaaaatgacctatattacagggggtaaa 45632556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 21780179 - 21780122
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  21780179 tttacagggggaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 21780122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 50138546 - 50138488
Alignment:
Q  16 tttacagggggaaaatc-gaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||||| ||||||||||    
T  50138546 tttacagggggaaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 50138488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 21798565 - 21798625
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaa 76  Q
    ||||||||||| |||  ||||||| ||||||||||||||| |||||| |||||||||||||    
T  21798565 tttacaggggggaaactgaaaatgacctatattacaggggataaagacctattaacccaaa 21798625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 2921775 - 2921829
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    ||||||| ||||||||||||||| ||||||||| | ||||||||||||||||||||    
T  2921775 ttacaggaggaaaatcgaaaatgacctatattata-ggggtaaagatctattaacc 2921829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 5401820 - 5401761
Alignment:
Q  16 tttacagg-gggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaaccc 73  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  5401820 tttacaggagggaaaatcgaaaatgacctatattacaggggggtaaagacctattaaccc 5401761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 5401997 - 5402056
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattac-agggggtaaagatctattaaccca 74  Q
    ||||||||||||||| || ||||| |||||||||| |||||||||||| |||||||||||    
T  5401997 tttacagggggaaaaccggaaatgacctatattacaagggggtaaagacctattaaccca 5402056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 22272989 - 22272930
Alignment:
Q  15 atttacagg-gggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| ||||||| |||||||| |||||||||||||||||||| | ||||||||||    
T  22272989 atttacaggagggaaaaccgaaaatgacctatattacagggggtaaaaacctattaaccc 22272930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 46094239 - 46094314
Alignment:
Q  16 tttacagggggaaaatc-gaaaatggcctatattacagggggtaaagatctattaacccaaaaagaaaatattatt 90  Q
    ||||||||||||||| | | ||||| |||||||||||| ||||||||| ||||||||||| ||| ||| |||||||    
T  46094239 tttacagggggaaaaaccggaaatgacctatattacagagggtaaagacctattaacccataaataaattattatt 46094314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 50719908 - 50719971
Alignment:
Q  16 tttacagg-gggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||||| ||||||| |||||||| ||||||||| |||||||||||  |||||||||||||||    
T  50719908 tttacaggagggaaaaccgaaaatgacctatattatagggggtaaagcactattaacccaaaaa 50719971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 18320695 - 18320753
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattaca-gggggtaaagatctattaaccc 73  Q
    ||||||||||||||| || ||||| ||||||||||| ||||||||||| ||||||||||    
T  18320695 tttacagggggaaaaccggaaatgacctatattacaggggggtaaagacctattaaccc 18320753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 50881421 - 50881479
Alignment:
Q  16 tttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| ||| | |||| ||||||||||||||||||||||||| ||||||||||    
T  50881421 tttacagggggcaaaaccaaaagtggcctatattacagggggtaaagacctattaaccc 50881479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 51965429 - 51965371
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    ||||||| ||||||| || ||||| |||||||||||||| ||||||| |||||||||||    
T  51965429 tttacagagggaaaaccggaaatgacctatattacagggagtaaagacctattaaccca 51965371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 7272318 - 7272261
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattaca-gggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| |||||||  ||||||||||| ||||||||||| |||||||||||||||    
T  7272318 gggggaaaaccgaaaataacctatattacaagggggtaaagacctattaacccaaaaa 7272261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 49300788 - 49300727
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaagaaaa 83  Q
    ||||||||| || ||||| ||||||||||||||||||||   |||||||| |||||||||||    
T  49300788 gggggaaaaccggaaatgacctatattacagggggtaaaacactattaactcaaaaagaaaa 49300727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 550712 - 550672
Alignment:
Q  34 aaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    |||||| |||||||||||||||||||||| |||||||||||    
T  550712 aaaatgacctatattacagggggtaaagacctattaaccca 550672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 14946274 - 14946318
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||    
T  14946274 tttacagggagaaaatcgaaaataacctatattacagggggtaaa 14946318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 19875981 - 19876033
Alignment:
Q  27 aaaatcgaaaatggcctatattacaggggg-taaagatctattaacccaaaaa 78  Q
    |||| |||||||| |||||||||||||||| |||||| |||||||||||||||    
T  19875981 aaaaccgaaaatgacctatattacagggggttaaagacctattaacccaaaaa 19876033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 21246528 - 21246476
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggg-gtaaagatctattaaccc 73  Q
    ||||||||| |||||||| ||||||||||||||| ||||||| ||||||||||    
T  21246528 gggggaaaaccgaaaatgacctatattacaggggtgtaaagacctattaaccc 21246476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 25244674 - 25244738
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagg-gggtaaagatctattaacccaaaaa 78  Q
    |||||||||||| ||| |||||||| | ||||||||||| ||||||||  |||||||||||||||    
T  25244674 atttacaggggggaaaccgaaaatgacatatattacaggagggtaaagcactattaacccaaaaa 25244738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 54130533 - 54130589
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||| ||||||||||| ||||| ||||||||| ||||| |||||| ||||||||||    
T  54130533 ttacatggggaaaatcggaaatgacctatattagaggggataaagacctattaaccc 54130589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 3525875 - 3525930
Alignment:
Q  24 gggaaaatc-gaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| ||||||| |||||||||||| |||||||||  ||||||||||||||    
T  3525875 gggaaaatccgaaaatgacctatattacagagggtaaagacttattaacccaaaaa 3525930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 6439244 - 6439185
Alignment:
Q  15 atttacaggggg-aaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| | |||| |||||||| |||||||||||||||||||||  ||||||||||    
T  6439244 atttacagggtgtaaaaccgaaaatgacctatattacagggggtaaagcactattaaccc 6439185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 24215739 - 24215798
Alignment:
Q  15 atttacagggg-gaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| ||||| |  ||||| |||||||||||||||||||||| ||||||||||    
T  24215739 atttacaggggagaaaaccagaaatgacctatattacagggggtaaagacctattaaccc 24215798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 27579571 - 27579516
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaac 71  Q
    ||||||| | ||||| || ||||| |||||||||||||||||||||| ||||||||    
T  27579571 tttacagagagaaaaccggaaatgacctatattacagggggtaaagacctattaac 27579516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 11563536 - 11563574
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  11563536 aaatgacctatattacagggggtaaagacctattaaccc 11563574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 16493576 - 16493518
Alignment:
Q  16 tttacagggg-gaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| ||||| || ||||| ||||||||||||| |||||||| ||||||||||    
T  16493576 tttacaggggtgaaaaccggaaatgacctatattacaggaggtaaagacctattaaccc 16493518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 20125437 - 20125475
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  20125437 aaatgacctatattacagggggtaaagacctattaaccc 20125475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 73
Target Start/End: Complemental strand, 20962224 - 20962194
Alignment:
Q  43 tatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||||||||||||    
T  20962224 tatattacagggggtaaagatctattaaccc 20962194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 27626990 - 27627044
Alignment:
Q  24 gggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||| |||||| | ||||||||||||||||||||   |||||||||||||||    
T  27626990 gggaaaaacgaaaacgacctatattacagggggtaaaacactattaacccaaaaa 27627044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 37273414 - 37273452
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  37273414 aaatgacctatattacagggggtaaagacctattaaccc 37273452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 4431344 - 4431287
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||||||| | |||||  |||||||||||||||||||||  | |||||||||||||    
T  4431344 agggggaaaaccaaaaataacctatattacagggggtaaagcaccattaacccaaaaa 4431287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 5420249 - 5420294
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||||||||||||||   |||||| |||||||||||||||||||||    
T  5420249 tttacagggggaaaacaaaaaatgacctatattacagggggtaaag 5420294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 21994373 - 21994328
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    |||||| ||| || |||||||||||||||||||||| |||||||||    
T  21994373 aaaatcaaaagtgtcctatattacagggggtaaagacctattaacc 21994328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 28292283 - 28292328
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||    
T  28292283 tttacagggggaaaataaaaaatgacctatattacaaggggtaaag 28292328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 35370388 - 35370433
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    ||||||| ||||||| | |||||| |||||||||||||||||||||    
T  35370388 tttacagagggaaaaccaaaaatgacctatattacagggggtaaag 35370433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 36405716 - 36405671
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||||||||||||||   |||||| |||||||||||||||||||||    
T  36405716 tttacagggggaaaactaaaaatgacctatattacagggggtaaag 36405671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 36405853 - 36405898
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||||||||| |||| | |||||| |||||||||||||||||||||    
T  36405853 tttacaggggaaaaaccaaaaatgacctatattacagggggtaaag 36405898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 46360893 - 46360938
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||||||||||||||   |||||| |||||||||||||||||||||    
T  46360893 tttacagggggaaaacaaaaaatgacctatattacagggggtaaag 46360938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 54554440 - 54554383
Alignment:
Q  17 ttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| ||| | |||| || |||||||||||||||||||||| ||||||||||    
T  54554440 ttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 54554383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 7913428 - 7913488
Alignment:
Q  15 atttacaggggg-aaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    |||||||||||| |||| |||||||| | ||||||||||||||||||   |||||||||||    
T  7913428 atttacagggggtaaaaccgaaaatgacatatattacagggggtaaaacactattaaccca 7913488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 13780413 - 13780457
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||| ||||||||| ||||| ||||||||||| ||||||||    
T  13780413 tttacaggaggaaaatcggaaatgacctatattacatggggtaaa 13780457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 16589039 - 16588971
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaagaaaa 83  Q
    ||||||||| ||||||||||||||  ||||||||||||| ||||||   |||||||||| |||| ||||    
T  16589039 tttacagggtggaaaatcgaaaataacctatattacaggaggtaaaacactattaaccctaaaaaaaaa 16588971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 21246709 - 21246768
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattaca--gggggtaaagatctattaaccc 73  Q
    |||||||||||| || |||||||| | |||||||||  ||||||||||| ||||||||||    
T  21246709 tttacagggggagaaccgaaaatgacatatattacagggggggtaaagacctattaaccc 21246768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 21780374 - 21780422
Alignment:
Q  35 aaatggcctatattacaggg-ggtaaagatctattaacccaaaaagaaa 82  Q
    ||||| |||||||||||||| |||||||| |||||||||||| ||||||    
T  21780374 aaatgacctatattacagggaggtaaagacctattaacccaacaagaaa 21780422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 22451990 - 22451946
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||||||||   |||||| ||||||||||||||||||||    
T  22451990 tttacagggggaaaacaaaaaatgacctatattacagggggtaaa 22451946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 27579742 - 27579806
Alignment:
Q  15 atttacagggg-gaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||| ||||| || ||||| |||||||||||| |||||||||  |||||||| |||||    
T  27579742 atttacaggggagaaaaccggaaatgacctatattacagagggtaaagacatattaaccaaaaaa 27579806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 28292110 - 28292066
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||||||||   |||||| ||||||||||||||||||||    
T  28292110 tttacagggggaaaacaaaaaatgacctatattacagggggtaaa 28292066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 29248274 - 29248242
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||| ||||||||||    
T  29248274 cctatattacagggggtaaagacctattaaccc 29248242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 31110481 - 31110529
Alignment:
Q  15 atttacagggggaaaatcgaaaa-tggcctatattacagggggtaaaga 62  Q
    |||||||||||||||| | |||| || ||||||||||||||||||||||    
T  31110481 atttacagggggaaaaaccaaaaatgacctatattacagggggtaaaga 31110529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 42861614 - 42861658
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||||||||   |||||| ||||||||||||||||||||    
T  42861614 tttacagggggaaaacaaaaaatgacctatattacagggggtaaa 42861658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 48029471 - 48029415
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| ||| | |||||| |||| ||||||||||||||||  ||||||||||    
T  48029471 ttacagggggcaaaaccaaaatgacctaaattacagggggtaaaggcctattaaccc 48029415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 51353282 - 51353246
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattaca 51  Q
    |||||||||||||||| |||||||| |||||||||||    
T  51353282 atttacagggggaaaaccgaaaatgacctatattaca 51353246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 51754225 - 51754257
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||||||||| |||||||||||    
T  51754225 cctatattacagggggtaaagctctattaaccc 51754257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 52264502 - 52264458
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||| |||||| ||| ||||||||||||| |||||||||    
T  52264502 tttacaggggcaaaatcaaaagtggcctatattacggggggtaaa 52264458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 13279416 - 13279479
Alignment:
Q  16 tttacagggggaaaatc-gaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||||| |||||||||||||||    
T  13279416 tttacagggggaaaaaccgaaaatgacctatattacagggggtaaagacctattaacccaaaaa 13279479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 39580165 - 39580227
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaa 77  Q
    ||||||||| |||||| || ||||| |||||||||||||||||||||| ||||||||||||||    
T  39580165 atttacaggaggaaaaccggaaatgacctatattacagggggtaaagacctattaacccaaaa 39580227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 45163970 - 45163914
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  45163970 tttacagtgggaaaatcgaaaatgacctatattacaaggggtaaagacctattaacc 45163914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 3307675 - 3307738
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| || |||||| ||||| ||||||||||||||||||||||  ||||||||||||||    
T  3307675 atttacaggagggaaatcggaaatgacctatattacagggggtaaagacttattaacccaaaaa 3307738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 33757461 - 33757410
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  33757461 gggggaaaatcaaaagtgacctatattacagggggtaaagatctattaaccc 33757410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 44568900 - 44568849
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||||    
T  44568900 agggagaaaaccgaaaatgacctatattacagggggtaaagatctattaacc 44568849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 48104728 - 48104787
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    ||||||| ||||||| |||||||| ||||||||||||| |||||||| ||||||||||||    
T  48104728 tttacagagggaaaaccgaaaatgacctatattacaggaggtaaagacctattaacccaa 48104787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 1831978 - 1832036
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||| ||| || |||||||||||||||||||||  ||||||||||    
T  1831978 atttacagggggaaaatcaaaagtgccctatattacagggggtaaagccctattaaccc 1832036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 23371506 - 23371448
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    ||||||||||||||| |  ||||| |||||||||||||||||||||| |||||||||||    
T  23371506 tttacagggggaaaaccataaatgacctatattacagggggtaaagacctattaaccca 23371448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 13797610 - 13797667
Alignment:
Q  16 tttacagggg-gaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||| |||||||||    
T  13797610 tttacaggggagaaaatcggaaatgacctatattacagggggtaaagacctattaacc 13797667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 5766696 - 5766621
Alignment:
Q  16 tttacagggggaaaatc-gaaaatggcctatattacagggggtaaagatctattaacccaaaaagaaaatattatt 90  Q
    ||||||||||||||| | | ||||| ||||||||||||||||||||||  |||||||||| ||| ||| |||||||    
T  5766696 tttacagggggaaaaaccggaaatgacctatattacagggggtaaagacatattaacccataaataaattattatt 5766621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 5909771 - 5909708
Alignment:
Q  16 tttacagggggaaaatcga-aaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||||| | | ||||| ||||||||||| |||||||||| |||||||||||||||    
T  5909771 tttacagggggaaaaaccagaaatgacctatattacatggggtaaagacctattaacccaaaaa 5909708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 38193213 - 38193256
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||| |||||||||||||||||||||| |||||||||||||||    
T  38193213 aaatgacctatattacagggggtaaagacctattaacccaaaaa 38193256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 14079005 - 14079059
Alignment:
Q  25 ggaaaatcgaaaatggcctatattaca-gggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||||| ||||||||||| ||||||||||| |||||||||| ||||    
T  14079005 ggaaaatcgaaaatgacctatattacatgggggtaaagacctattaaccctaaaa 14079059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 14389033 - 14389087
Alignment:
Q  25 ggaaaatcgaaaatggcctatattaca-gggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||||| ||||||||||| ||||||||||| |||||||||| ||||    
T  14389033 ggaaaatcgaaaatgacctatattacatgggggtaaagacctattaaccctaaaa 14389087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 15037314 - 15037256
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    ||||||||||||||| || ||||| || |||||||| |||||||||| |||||||||||    
T  15037314 tttacagggggaaaaccggaaatgaccaatattacaaggggtaaagacctattaaccca 15037256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 24845688 - 24845638
Alignment:
Q  23 ggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||| |||||||| ||||||||||||| |||||||| ||||||||||    
T  24845688 ggggaaaaccgaaaatgacctatattacaggaggtaaagacctattaaccc 24845638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 31186714 - 31186668
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  31186714 aaaatcgaaaatgacctatattacagagggtaaagacctattaaccc 31186668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 38193020 - 38192962
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaaccc 73  Q
    ||||||||| |||||||| ||||| |||||||||||| |||||||||| ||||||||||    
T  38193020 tttacagggagaaaatcggaaatgacctatattacaggggggtaaagacctattaaccc 38192962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 39065440 - 39065386
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaa 70  Q
    |||||||||| |||| || ||||| |||||||||||||||||||||| |||||||    
T  39065440 tttacaggggaaaaaccggaaatgacctatattacagggggtaaagacctattaa 39065386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 42202218 - 42202160
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    ||||||||||| ||||| ||| || |||||||| ||||||||||||| |||||||||||    
T  42202218 tttacaggggggaaatcaaaagtgacctatattgcagggggtaaagacctattaaccca 42202160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 44569077 - 44569135
Alignment:
Q  16 tttacagggg-gaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| |||||||||||||| ||| ||||||||||| |||||| ||||||||||    
T  44569077 tttacaggggagaaaatcgaaaatgacctgtattacaggggataaagacctattaaccc 44569135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 6269577 - 6269528
Alignment:
Q  24 gggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||  ||||||| |||||||||||||||||||||| ||||||||||    
T  6269577 gggaaaactgaaaatgacctatattacagggggtaaagacctattaaccc 6269528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 9915708 - 9915651
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| ||||  ||||||  |||||||||||||||||||||| ||||||||||    
T  9915708 tttacaggggaaaaactgaaaataacctatattacagggggtaaagacctattaaccc 9915651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 9923620 - 9923563
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| ||||  ||||||  |||||||||||||||||||||| ||||||||||    
T  9923620 tttacaggggaaaaactgaaaataacctatattacagggggtaaagacctattaaccc 9923563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 13286688 - 13286635
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattaca-gggggtaaagatctatt 68  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||||||| |||||    
T  13286688 tttacagggggaaaaccgaaaatgacctatattacatgggggtaaagacctatt 13286635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 19272457 - 19272506
Alignment:
Q  24 gggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||| | |||||| |||||||||||||||||||||| ||||||||||    
T  19272457 gggaaaaccaaaaatgacctatattacagggggtaaagacctattaaccc 19272506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 23784641 - 23784584
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||| |   |||| |||||||||||||||||||||| ||||||||||    
T  23784641 tttacagggggaaaaccagtaatgacctatattacagggggtaaagacctattaaccc 23784584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 30335382 - 30335427
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||    
T  30335382 tttacagggggaaaaccaaaaatgacctatattacagggggtaaag 30335427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 35097646 - 35097601
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||    
T  35097646 tttacagggggaaaaccaaaaatgacctatattacagggggtaaag 35097601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 38192653 - 38192596
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||| |||||||| | |||||||||||| ||||||  ||||||||||    
T  38192653 tttacagggggaaaaccgaaaatgacatatattacagggtgtaaagtactattaaccc 38192596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 8174923 - 8174879
Alignment:
Q  34 aaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||    
T  8174923 aaaatgccctatattacagggggtaaagacctattagcccaaaaa 8174879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 21298071 - 21298015
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    |||||| ||| |||| |||||||| | |||||||||||||||||||| |||||||||    
T  21298071 tttacacgggaaaaaccgaaaatgacttatattacagggggtaaagacctattaacc 21298015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 24233611 - 24233667
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||| ||||||||||||||||| ||||||||| ||||||||||   ||||||||||    
T  24233611 ttacatggggaaaatcgaaaatgacctatattatagggggtaaaacactattaaccc 24233667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 3402119 - 3402178
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaaccc 73  Q
    ||||||||| ||||||||||||||| |||||||||||| |||||||||  ||||||||||    
T  3402119 tttacagggtggaaaatcgaaaatgacctatattacagaggggtaaagcactattaaccc 3402178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 29141168 - 29141211
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaa 70  Q
    ||||||||||||| ||||||||||||||| |||||| |||||||    
T  29141168 aaaatcgaaaatgacctatattacaggggataaagacctattaa 29141211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 2301140 - 2301194
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaa 70  Q
    ||||||||||||||| || ||||| |||| ||||||||||||||||  |||||||    
T  2301140 tttacagggggaaaaccggaaatgacctacattacagggggtaaagcactattaa 2301194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 12180846 - 12180892
Alignment:
Q  28 aaatcgaaaatggcctatattacaggggg-taaagatctattaaccc 73  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||||    
T  12180846 aaatcgaaaatgacctatattacagggggataaagacctattaaccc 12180892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 20164434 - 20164480
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||| ||||||||||||||||||||   ||||||||||    
T  20164434 aaaatcgaaaatgacctatattacagggggtaaaacactattaaccc 20164480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 21444182 - 21444240
Alignment:
Q  16 tttacaggggg-aaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||   ||||||||||    
T  21444182 tttacagggggtaaaaccgaaaatgacctatattacagggggtaaaacactattaaccc 21444240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 22335518 - 22335580
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattaca-gggggtaaagatctattaacccaaaa 77  Q
    ||||||||||||||| | |||||| ||||||||||| ||||||||||  | ||||||||||||    
T  22335518 tttacagggggaaaaccaaaaatgacctatattacaggggggtaaagcaccattaacccaaaa 22335580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 24000639 - 24000697
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    |||||||||||| |  ||||||||  ||||||||||| || ||||||||||||||||||    
T  24000639 tttacagggggagacccgaaaatgatctatattacagcggataaagatctattaaccca 24000697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 24555900 - 24555958
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| |||| |  ||||| |||||||||||||||||||| | ||||||||||    
T  24555900 atttacaggggaaaaaccagaaatgacctatattacagggggtaaaaacctattaaccc 24555958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 26050221 - 26050175
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||| |||||||| ||||||||| |||||||||||| ||||||||||    
T  26050221 aaaaccgaaaatgacctatattagagggggtaaagacctattaaccc 26050175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 26059580 - 26059534
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||| |||||||| ||||||||| |||||||||||| ||||||||||    
T  26059580 aaaaccgaaaatgacctatattagagggggtaaagacctattaaccc 26059534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 45639724 - 45639786
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||||||||||||   |||||| |||||||||||||||||||||  | |||||||| ||||    
T  45639724 tttacagggggaaaacaaaaaatgacctatattacagggggtaaagcaccattaaccctaaaa 45639786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 2300874 - 2300817
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||||||| || ||||| |||||||||||||||||| |   |||||||||||||||    
T  2300874 agggggaaaaccggaaatgacctatattacagggggtagaacactattaacccaaaaa 2300817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 16902337 - 16902393
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| |||| | |||||| ||||||||||| |||||||||| ||||||||||    
T  16902337 tttacaggggaaaaaccaaaaatgacctatattaca-ggggtaaagacctattaaccc 16902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 19979681 - 19979648
Alignment:
Q  43 tatattacagggggtaaagatctattaacccaaa 76  Q
    |||||||||||||||||||| |||||||||||||    
T  19979681 tatattacagggggtaaagacctattaacccaaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 19979878 - 19979935
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| |||||  |||||| | ||||||| |||||||||||| ||||||||||    
T  19979878 tttacaggggaaaaataaaaaatgacatatattatagggggtaaagacctattaaccc 19979935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 23371679 - 23371736
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagg-gggtaaagatctattaacc 72  Q
    ||||| || ||||||||||||||| ||||||||| ||| ||||||||| |||||||||    
T  23371679 tttacgggaggaaaatcgaaaatgacctatattataggagggtaaagacctattaacc 23371736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 23806286 - 23806225
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaa 77  Q
    |||||||||| |||||| ||| || |||||||| |||||||||||   ||||||||||||||    
T  23806286 tttacaggggaaaaatcaaaagtgacctatattgcagggggtaaaagcctattaacccaaaa 23806225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 24478081 - 24478024
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| |||| || ||||| ||||||||||||||||||||   ||||||||||    
T  24478081 tttacaggggaaaaaccggaaatgacctatattacagggggtaaaacactattaaccc 24478024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 28000118 - 28000163
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||||||||||||||   |||||| |||||||||||||||||||||    
T  28000118 tttacagggggaaaacaaaaaatgacctatattacagggggtaaag 28000163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 29141034 - 29140997
Alignment:
Q  23 ggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  29141034 ggggaaaatcggaaatgacctatattacagggggtaaa 29140997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 32946570 - 32946615
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||| |||||||||| || ||||| |||||||||||||||||||||    
T  32946570 tttatagggggaaaaccggaaatgacctatattacagggggtaaag 32946615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 442869 - 442909
Alignment:
Q  33 gaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||||||||||||||||   ||||||||||    
T  442869 gaaaatggcctatattacagggggtaaaacactattaaccc 442909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 1594149 - 1594181
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||| ||||||||||    
T  1594149 cctatattacagggggtaaagacctattaaccc 1594181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 1830864 - 1830812
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||| ||| |  |||||||||||||||||||||  ||||||||||    
T  1830864 agggggaaaatcaaaagtatcctatattacagggggtaaagccctattaaccc 1830812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 3401860 - 3401800
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaaccca 74  Q
    ||||||||| |||||| |||||||| |||||||||||| |||||||||  |||||||||||    
T  3401860 tttacagggtggaaaaccgaaaatgacctatattacagaggggtaaagcactattaaccca 3401800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 9553432 - 9553400
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||| ||||||||||    
T  9553432 cctatattacagggggtaaagacctattaaccc 9553400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 10980605 - 10980653
Alignment:
Q  25 ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||  ||||| |||||||||||| ||||||||| ||||||||||    
T  10980605 ggaaaatcagaaatgacctatattacagagggtaaagacctattaaccc 10980653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 12005316 - 12005264
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||  | ||||||||||||||||||||||||||   ||||||||||    
T  12005316 agggggaaaactggaaatggcctatattacagggggtaaaacactattaaccc 12005264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 21811455 - 21811415
Alignment:
Q  34 aaaatggcctatattacaggggg-taaagatctattaaccc 73  Q
    |||||| |||||||||||||||| |||||||||||||||||    
T  21811455 aaaatgacctatattacagggggataaagatctattaaccc 21811415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 24374325 - 24374285
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacaggggg 56  Q
    ||||||||||||||| | |||||| ||||||||||||||||    
T  24374325 tttacagggggaaaacccaaaatgacctatattacaggggg 24374285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 35158241 - 35158181
Alignment:
Q  16 tttacaggggg-aaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||   ||||||||||||    
T  35158241 tttacagggggtaaaaccgaaaatgacctatattacaggggataaaacactattaacccaa 35158181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 43596374 - 43596330
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||| |||||  |||||| ||||||||||||||||||||    
T  43596374 tttacaggggaaaaataaaaaatgacctatattacagggggtaaa 43596330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 26360 - 26306
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  26360 agggggaaaaccgaaaatgacctatattacagggggtaaagacctattaacccaa 26306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 27987355 - 27987297
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||    
T  27987355 atttacagggggaaaaccgaaaatgacctatattatagggggtaaagacctattaaccc 27987297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 28044657 - 28044599
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||    
T  28044657 atttacagggggaaaaccgaaaatgacctatattatagggggtaaagacctattaaccc 28044599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 3912480 - 3912537
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||  |||||||||    
T  3912480 tttacagggggaaaaccgaaaatgacctatattacagggggtaaagacttattaaccc 3912537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 30222087 - 30222144
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||    
T  30222087 tttacagggggaaaaccgaaaatgacctatattacagggggtaaagcactattaaccc 30222144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 960497 - 960555
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    |||||||| |||||| || ||||| |||||||||||||||||||||| |||||||||||    
T  960497 tttacaggaggaaaaccggaaatgacctatattacagggggtaaagacctattaaccca 960555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 14329599 - 14329657
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| |||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  14329599 tttacagggaggaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 14329657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 27543469 - 27543411
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaaccc 73  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||| ||||||||||    
T  27543469 tttacagggggaaaaccgaaaatgacctatattacaggggggtaaagacctattaaccc 27543411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 43945227 - 43945166
Alignment:
Q  16 tttacagggggaaaatc-gaaaatggcctatattacagggggtaaagatctattaacccaaa 76  Q
    ||||||||||||||| | ||||||| | |||||||||||||||||||| |||||||||||||    
T  43945227 tttacagggggaaaaaccgaaaatgacatatattacagggggtaaagacctattaacccaaa 43945166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 27543644 - 27543692
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaacccaaaaagaaaa 83  Q
    ||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  27543644 aaatgacctatattacagggggtaaagacctattaacccaaaaaaaaaa 27543692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 3912314 - 3912251
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||||| || ||||| |||||||||||| |||||||||| || ||||||||||||    
T  3912314 tttacagggggaaaaccggaaatgacctatattacaggggggtaaagacctgttaacccaaaaa 3912251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 29309616 - 29309565
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| || ||||| |||||||||||||||||||||| ||||||||||    
T  29309616 gggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 29309565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 34845342 - 34845279
Alignment:
Q  16 tttacagg-gggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||||| ||||||| || ||||||||||||||||||||| |||||  |||||||||||||||    
T  34845342 tttacaggagggaaaaccggaaatggcctatattacaggggctaaagcactattaacccaaaaa 34845279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 21692604 - 21692650
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||||||||||||||| | |||||| |||||||||||||||||||||    
T  21692604 atttacagggggaaaaccaaaaatgacctatattacagggggtaaag 21692650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 27198202 - 27198144
Alignment:
Q  16 tttacagg-gggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||| ||||||| |||||||| ||||||||||||||| |||||| ||||||||||    
T  27198202 tttacaggagggaaaaccgaaaatgacctatattacaggggataaagacctattaaccc 27198144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 34985322 - 34985384
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| ||||| |  ||||| |||||||||||||||||||||| |||||||||| ||||    
T  34985322 tttacagggcgaaaaccagaaatgacctatattacagggggtaaagacctattaaccctaaaa 34985384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 23428793 - 23428732
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaa 77  Q
    ||||||||||||||| || ||||| |||||||||||||||||||||  |  |||||||||||    
T  23428793 tttacagggggaaaaccgcaaatgacctatattacagggggtaaagcacctttaacccaaaa 23428732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 18367077 - 18367025
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    ||||||||| |||||||| |||||||||||||||||||||  | |||||||||    
T  18367077 gggggaaaaccgaaaatgacctatattacagggggtaaagcaccattaaccca 18367025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 23428937 - 23428981
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||    
T  23428937 tttacagggggaaaaccgaaaattacctatattacagggggtaaa 23428981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 25277715 - 25277763
Alignment:
Q  25 ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||| || ||||| |||||||||||||||||||||| ||||||||||    
T  25277715 ggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 25277763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 28561491 - 28561435
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    ||||||||||| ||| | ||| || ||||||||||||||||||||| ||||||||||    
T  28561491 tttacaggggggaaaccaaaagtgccctatattacagggggtaaagctctattaacc 28561435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 28566989 - 28566933
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    ||||||||||| ||| | ||| || ||||||||||||||||||||| ||||||||||    
T  28566989 tttacaggggggaaaccaaaagtgccctatattacagggggtaaagctctattaacc 28566933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 29309780 - 29309831
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| || ||||| |||||||||||||||||||| | ||||||||||    
T  29309780 gggggaaaaccggaaatgacctatattacagggggtaaaaacctattaaccc 29309831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 3785581 - 3785523
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    ||||||||||||||   |||||| |||||||||||||||||||||  | ||||||||||    
T  3785581 ttacagggggaaaacaaaaaatgacctatattacagggggtaaagcaccattaacccaa 3785523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 4482103 - 4482045
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||| |||||||| || ||||| | |||||||||||||||||| | ||||||||||    
T  4482103 atttacaaggggaaaaccggaaatgacatatattacagggggtaaaaacctattaaccc 4482045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 12330391 - 12330333
Alignment:
Q  16 tttacagggggaaaatcga-aaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||| | | ||||  |||||||||||||||||||||| ||||||||||    
T  12330391 tttacagggggaaaaactagaaataacctatattacagggggtaaagacctattaaccc 12330333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 73
Target Start/End: Original strand, 12330590 - 12330620
Alignment:
Q  43 tatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||||||||||||    
T  12330590 tatattacagggggtaaagatctattaaccc 12330620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 13572598 - 13572540
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||||   ||||||||||    
T  13572598 tttacagggtggaaaaccgaaaatgacctatattacagggggtaaaacactattaaccc 13572540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 15935444 - 15935382
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||| || |||| ||||||||| ||||||||||| ||||||||  |||||||||| ||||    
T  15935444 tttacagaggtaaaaccgaaaatggtctatattacagagggtaaagtactattaaccctaaaa 15935382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 40702009 - 40702067
Alignment:
Q  16 tttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| ||| |||||| || |||||||||||||||||||||  ||||||||||    
T  40702009 tttacagggggcaaaacgaaaagtgacctatattacagggggtaaaggcctattaaccc 40702067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 2270289 - 2270350
Alignment:
Q  15 atttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaacccaa 75  Q
    |||||||||||| ||| | |||| || |||||| ||||||||||||||| ||||||||||||    
T  2270289 atttacagggggcaaaaccaaaagtgacctataatacagggggtaaagacctattaacccaa 2270350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 2873765 - 2873822
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||| |||||| |||||||| | ||||||||||||||||||   ||||||||||    
T  2873765 tttacaggaggaaaaccgaaaatgacttatattacagggggtaaaacactattaaccc 2873822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 9513885 - 9513828
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||| ||||||| || || ||||| ||||||||||||||||||||||  |||||||||    
T  9513885 tttatagggggacaaccggaaatgacctatattacagggggtaaagacatattaaccc 9513828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 27164657 - 27164714
Alignment:
Q  16 tttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaacc 72  Q
    ||||||||||| ||| | |||| || |||||||||||||||||||||| |||||||||    
T  27164657 tttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 27164714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 5566541 - 5566477
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| ||||||  ||||||| |||||||||||| |||||||||  |||||||||||||||    
T  5566541 tttacagggtggaaaactgaaaatgacctatattacaggggggtaaagcactattaacccaaaaa 5566477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 11105828 - 11105788
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacaggggg 56  Q
    ||||||||||||||| | |||||| ||||||||||||||||    
T  11105828 tttacagggggaaaaccaaaaatgacctatattacaggggg 11105788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 21692456 - 21692416
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacaggggg 56  Q
    ||||||||||||||| | |||||| ||||||||||||||||    
T  21692456 tttacagggggaaaaccaaaaatgacctatattacaggggg 21692416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 27637385 - 27637449
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacaggggg-taaagatctattaacccaaaaa 78  Q
    ||||||||| |||||| |||||||| |||||||||||||||| |||||  |||||||||| ||||    
T  27637385 tttacagggtggaaaaccgaaaatgacctatattacagggggttaaagcactattaaccctaaaa 27637449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 27987552 - 27987588
Alignment:
Q  42 ctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  27987552 ctatattacagggggtaaagacctattaaccctaaaa 27987588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 28044854 - 28044890
Alignment:
Q  42 ctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  28044854 ctatattacagggggtaaagacctattaaccctaaaa 28044890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 40411399 - 40411455
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    |||| ||||| |||| | |||||| |||||||| ||||||||||||| |||||||||    
T  40411399 tttataggggaaaaacctaaaatgacctatattgcagggggtaaagacctattaacc 40411455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 40652657 - 40652621
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaac 71  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  40652657 aaatgacctatattacagggggtaaagacctattaac 40652621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 10976747 - 10976804
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||| || ||||| |||||||||||||||||||||| ||||||||||    
T  10976747 tttacagggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 10976804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 33052874 - 33052812
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||| |||||||||| ||||    
T  33052874 tttacagggggaaaataaaaaatgacctatattacaaggggtaaagacctattaaccctaaaa 33052812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 12383043 - 12383100
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagg-gggtaaagatctattaacc 72  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||  |||||||||    
T  12383043 tttacagggggaaaatcgaaaatgacctatattacaggagggtaaaggcctattaacc 12383100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 12399592 - 12399645
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    ||||||||| |||||||  |||||||||||||||||||||| ||||||||||||    
T  12399592 gggggaaaaccgaaaataacctatattacagggggtaaagacctattaacccaa 12399645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 29104501 - 29104444
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| |||||  ||||||| |||||||||||||||||||||| ||||||||||    
T  29104501 tttacagggagaaaactgaaaatgacctatattacagggggtaaagacctattaaccc 29104444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 41184999 - 41184955
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||    
T  41184999 tttacagggggaaaatcgaaaatgacctatattacatggggtaaa 41184955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 36992982 - 36993057
Alignment:
Q  16 tttacagggggaaaatc-gaaaatggcctatattacagggggtaaagatctattaacccaaaaagaaaatattatt 90  Q
    ||||||||||||||| | | ||||| |||||||||||| ||||||||| ||||||||||| ||| ||| |||||||    
T  36992982 tttacagggggaaaaaccggaaatgacctatattacagagggtaaagacctattaacccataaataaattattatt 36993057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 5802473 - 5802416
Alignment:
Q  16 tttacagggggaaaatcga-aaatggcctatattacagggggtaaagatctattaacc 72  Q
    ||||||||||||||| | | ||||| |||||||| |||||||||||||||||||||||    
T  5802473 tttacagggggaaaaaccagaaatgacctatattgcagggggtaaagatctattaacc 5802416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 22642180 - 22642127
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaa 70  Q
    |||||||||||| | |||||||| ||||||||||||||||| |||| |||||||    
T  22642180 ttacagggggaataccgaaaatgacctatattacagggggtgaagacctattaa 22642127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 40657908 - 40657969
Alignment:
Q  23 ggggaaaatc-gaaaatggcctatattacagggggtaaagatctattaacccaaaaagaaaa 83  Q
    |||||||||| ||||||| |||||||||||||||||||||  ||||||| ||||||| ||||    
T  40657908 ggggaaaatccgaaaatgacctatattacagggggtaaagccctattaatccaaaaataaaa 40657969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 2870896 - 2870944
Alignment:
Q  28 aaatcgaaaatggcctatattacagggggtaaagatctattaacccaaa 76  Q
    |||||| ||||| ||||||||||||| |||||||| |||||||||||||    
T  2870896 aaatcggaaatgacctatattacaggaggtaaagacctattaacccaaa 2870944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 22551561 - 22551517
Alignment:
Q  34 aaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||| |||||||||||||||||||||| |||||||||| ||||    
T  22551561 aaaatgacctatattacagggggtaaagacctattaaccctaaaa 22551517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 11664278 - 11664317
Alignment:
Q  42 ctatattacagggggtaaagatctattaacccaaaaagaa 81  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  11664278 ctatattacaaggggtaaagacctattaacccaaaaagaa 11664317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 711295 - 711237
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaaccc 73  Q
    ||||||||||||||| |  ||||| |||||||||||| |||||||||| ||||||||||    
T  711295 tttacagggggaaaaccataaatgacctatattacaggggggtaaagacctattaaccc 711237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 15061822 - 15061880
Alignment:
Q  16 tttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| ||| | |||| || |||||||||||||||||||||| ||||||||||    
T  15061822 tttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 15061880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 25962860 - 25962802
Alignment:
Q  16 tttacaggggg-aaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||   ||||||||||    
T  25962860 tttacagggggtaaaaccgaaaatgacctatattacagggggtaaaacactattaaccc 25962802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 33659105 - 33659163
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattac-agggggtaaagatctattaaccc 73  Q
    ||||||||||||||| || ||||| |||||||||| |||||||||| | ||||||||||    
T  33659105 tttacagggggaaaaccggaaatgacctatattacaagggggtaaatacctattaaccc 33659163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 39153474 - 39153416
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaaccc 73  Q
    |||||| |||||||| || ||||| |||||||||||| |||||||||| ||||||||||    
T  39153474 tttacatggggaaaaccggaaatgacctatattacaggggggtaaagacctattaaccc 39153416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 39418958 - 39419012
Alignment:
Q  23 ggggaaaatcgaaaatggcctatattaca-gggggtaaagatctattaacccaaa 76  Q
    |||||||| || ||||| ||||||||||| ||||||||||| |||||||||||||    
T  39418958 ggggaaaaccggaaatgacctatattacaggggggtaaagacctattaacccaaa 39419012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 4561661 - 4561600
Alignment:
Q  16 tttacaggggga-aaatcgaaaatggcctatattacagggggtaaagatctattaacccaaa 76  Q
    |||||||||||| ||| || ||||| ||||||||||||| |||||||  |||||||||||||    
T  4561661 tttacagggggataaaccggaaatgacctatattacaggaggtaaagcactattaacccaaa 4561600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 4633817 - 4633772
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||    
T  4633817 tttacagggggaaaataaaaaatgacctatattacatggggtaaag 4633772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 5700669 - 5700718
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaac 71  Q
    ||||||||||| ||| || |||||||| |||||||||||| |||||||||    
T  5700669 gggggaaaatcaaaagtgacctatattgcagggggtaaaggtctattaac 5700718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 9672949 - 9672892
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||   |||||| |||||||||||||||||||||  | |||||||||||||    
T  9672949 agggggaaaacaaaaaatgacctatattacagggggtaaagcaccattaacccaaaaa 9672892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 10976598 - 10976539
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacag--ggggtaaagatctattaaccc 73  Q
    ||||||||||||||| ||| |||||||| |||||||||  |||||||||| ||||||||||    
T  10976598 atttacagggggaaa-tcggaaatggccgatattacagggggggtaaagacctattaaccc 10976539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 11438371 - 11438334
Alignment:
Q  41 cctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  11438371 cctatattacagggggtaaagctctattaaccctaaaa 11438334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 16920656 - 16920713
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||| |  |||||  ||||||||||||||||||||  ||||||||||    
T  16920656 tttacagggggaaaaccagaaatgatctatattacagggggtaaagcactattaaccc 16920713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 29754100 - 29754043
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacaggggg-taaagatctattaacccaaaaa 78  Q
    ||||||||| || ||||| ||||||||| |||||| ||||||||||||||||| ||||    
T  29754100 gggggaaaaccggaaatgacctatattataggggggtaaagatctattaaccctaaaa 29754043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 31920111 - 31920050
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaagaaaa 83  Q
    ||||||||| || ||||  ||||||||||||||||||||   ||||||||||||||| ||||    
T  31920111 gggggaaaagcggaaataacctatattacagggggtaaaacactattaacccaaaaaaaaaa 31920050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 33053065 - 33053106
Alignment:
Q  35 aaatggcctatattaca-gggggtaaagatctattaacccaa 75  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  33053065 aaatggcctatattacaggggggtaaagacctattaacccaa 33053106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 35599371 - 35599302
Alignment:
Q  16 tttacagggggaaaatcgaaaa-tggcctatattacaggggg-taaagatctattaacccaaaaagaaaa 83  Q
    ||||||||||| ||| | |||| || |||||||||||||||| ||||| |||||||||||||||| ||||    
T  35599371 tttacagggggcaaaaccaaaagtgacctatattacaggggggtaaaggtctattaacccaaaaaaaaaa 35599302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 15615135 - 15615103
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||| ||||||||||    
T  15615135 cctatattacagggggtaaagacctattaaccc 15615103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 16305120 - 16305164
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaac 71  Q
    ||||| ||||||| |||||||||||| ||||||||| ||||||||    
T  16305120 aaaatggaaaatgacctatattacagagggtaaagacctattaac 16305164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 20688853 - 20688801
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctatt 68  Q
    |||||| ||| |||| |||||||| ||||||||||||| |||||||| |||||    
T  20688853 tttacaagggaaaaaccgaaaatgacctatattacaggaggtaaagacctatt 20688801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 28593524 - 28593592
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaagaaaat 84  Q
    |||||||||| ||||   |||||| ||||||||||||||| |||||  | |||||||| ||||||||||    
T  28593524 tttacaggggaaaaacaaaaaatgacctatattacaggggttaaagcaccattaaccctaaaagaaaat 28593592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 30916534 - 30916478
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||| |||| |||||||| | ||||||| |||||||||| | |||||||||||||||    
T  30916534 ggggtaaaaccgaaaatgacatatattatagggggtaaaaaactattaacccaaaaa 30916478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 31861543 - 31861491
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||| |||| || ||||| ||||||||||||||| |||||| ||||||||||    
T  31861543 aggggaaaaaccggaaatgacctatattacaggggataaagacctattaaccc 31861491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 35798692 - 35798740
Alignment:
Q  25 ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||| |||||||| ||||||||||||||| |||||| ||| ||||||    
T  35798692 ggaaaaccgaaaatgacctatattacaggggataaagacctactaaccc 35798740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 37204990 - 37205042
Alignment:
Q  26 gaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||| |||||||| |||||||||||| |||||||||  ||||||||| ||||    
T  37204990 gaaaaccgaaaatgacctatattacagagggtaaagacatattaaccctaaaa 37205042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 37217519 - 37217583
Alignment:
Q  16 tttacaggggg-aaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaag 79  Q
    ||||||||||| ||||||| || || ||||||||||||||||||||   ||||||||| ||||||    
T  37217519 tttacagggggtaaaatcggaactgacctatattacagggggtaaaacactattaaccaaaaaag 37217583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 38482350 - 38482318
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||| ||||||||||    
T  38482350 cctatattacagggggtaaagacctattaaccc 38482318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 41254391 - 41254435
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||||||||||| | ||| |||| |||||||||||||||    
T  41254391 tttacagggggaaaatcggagatgacctacattacagggggtaaa 41254435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 49872949 - 49873006
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||| || ||||| |||||||||||||||||||||| ||||||||||    
T  49872949 tttacagggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 49873006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 53806796 - 53806853
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  53806796 tttatagggggaaaatcgaaaatgacctatattacaaggggtaaagacctattaaccc 53806853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 47115572 - 47115624
Alignment:
Q  26 gaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||| |||||||| |||||||||||||||||||||| |||||||||||||||    
T  47115572 gaaaaccgaaaatgacctatattacagggggtaaagacctattaacccaaaaa 47115624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 3548355 - 3548418
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||||| |||||||  |||||||||||| |||||||||| |||||||||||||||    
T  3548355 tttacagggggaaaaccgaaaataacctatattacagaggggtaaagacctattaacccaaaaa 3548418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 26769979 - 26769916
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||   |||||||||||||||    
T  26769979 tttacagggtggaaaatcgaaaatgacctatattacagggggtaaaacactattaacccaaaaa 26769916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 6510265 - 6510215
Alignment:
Q  23 ggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  6510265 ggggaaaatcggaaatgacctatattacagggggtaaagacctattaaccc 6510215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 7272813 - 7272869
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||  |||||||||    
T  7272813 tttacagggggaaaactgaaaatgacctatattacagggggtaaagcactattaacc 7272869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 16897405 - 16897449
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||    
T  16897405 tttagagggggaaaatcgaaaatgacctatattacagggggtaaa 16897449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 20957001 - 20956941
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggg-gtaaagatctattaacccaa 75  Q
    ||||||||||||||||| |||||| | ||||||||||||| ||||||| ||||||||||||    
T  20957001 tttacagggggaaaatcaaaaatgacatatattacaggggtgtaaagacctattaacccaa 20956941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 8355566 - 8355629
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattaca-gggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||||| |  ||||| ||||||||||| ||||||||||| |||||||||||||||    
T  8355566 tttacagggggaaaaccagaaatgacctatattacaggggggtaaagacctattaacccaaaaa 8355629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 25110060 - 25110118
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| |||||| |||||||| |||||||||||||| ||||||| ||||||||||    
T  25110060 tttacagggaggaaaaccgaaaatgacctatattacagggtgtaaagacctattaaccc 25110118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 27497857 - 27497799
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||| |||| |||||| ||||| | |||||||||||||||||||| ||||||||||    
T  27497857 atttacaagggggaaatcggaaatgacttatattacagggggtaaagacctattaaccc 27497799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 36867856 - 36867914
Alignment:
Q  16 tttacagggg-gaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| ||||| || ||||| ||||||||| |||||||||||||||||||||||    
T  36867856 tttacaggggagaaaaccggaaatgacctatattatagggggtaaagatctattaaccc 36867914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 7118139 - 7118082
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggg-gtaaagatctattaacccaaaaa 78  Q
    ||||||||| || ||||| ||||||||||||||| ||||||| |||||||||||||||    
T  7118139 gggggaaaaccggaaatgacctatattacaggggtgtaaagacctattaacccaaaaa 7118082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 19598917 - 19598970
Alignment:
Q  25 ggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||||| | |||||||||||||||||||  | |||||||||||||    
T  19598917 ggaaaatcgaaaatgacttatattacagggggtaaagcaccattaacccaaaaa 19598970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 29313846 - 29313789
Alignment:
Q  16 tttacagggg-gaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    |||||||||| ||||| |||||||| ||||||||||||| |||||||| |||||||||    
T  29313846 tttacaggggagaaaaccgaaaatgacctatattacaggaggtaaagacctattaacc 29313789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 30451539 - 30451576
Alignment:
Q  24 gggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||||||||||||||| |||||||||||||||||||||    
T  30451539 gggaaaatcgaaaatgacctatattacagggggtaaag 30451576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 49880743 - 49880796
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    ||||| ||| || ||||| |||||||||||||||||||||| ||||||||||||    
T  49880743 ggggggaaaccggaaatgacctatattacagggggtaaagacctattaacccaa 49880796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 10615334 - 10615270
Alignment:
Q  15 atttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||||||||| ||| | |||| || |||||||||||||||||||||| ||||||||| |||||    
T  10615334 atttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccaaaaaa 10615270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 13439677 - 13439629
Alignment:
Q  25 ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||| |||||||| ||||||||||||||||||||| | |||||||||    
T  13439677 ggaaaaccgaaaatgacctatattacagggggtaaagctttattaaccc 13439629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 19301236 - 19301192
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||    
T  19301236 tttacagggggaaaataaaaaatgacctatattacagggggtaaa 19301192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 18465012 - 18464953
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacaggggg-taaagatctattaaccc 73  Q
    |||||| |||||||||||| ||||| ||||| |||||||||| |||||| ||||||||||    
T  18465012 atttacggggggaaaatcggaaatgacctattttacagggggctaaagacctattaaccc 18464953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 46597533 - 46597572
Alignment:
Q  41 cctatattacagggggtaaagatctattaacccaaaaaga 80  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  46597533 cctatattacagggggtaaagacctattaaccctaaaaga 46597572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 51460781 - 51460820
Alignment:
Q  34 aaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  51460781 aaaatgacctatattacagggggtaaagacctattaaccc 51460820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 28208145 - 28208207
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattaca-gggggtaaagatctattaacccaaaaa 78  Q
    |||||||||||||| | ||| || ||||||||||| |||||||||| ||||||||||| ||||    
T  28208145 ttacagggggaaaaccaaaagtgccctatattacaggggggtaaagctctattaaccctaaaa 28208207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 31073616 - 31073582
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacaggggg 56  Q
    |||||||||||||||||| ||||||||||||||||    
T  31073616 gggggaaaatcgaaaatgacctatattacaggggg 31073582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 37977505 - 37977563
Alignment:
Q  16 tttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| ||| | |||| || |||||||||||||||||||||| ||||||||||    
T  37977505 tttacagggggcaaaaccaaaagtgtcctatattacagggggtaaagacctattaaccc 37977563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 39846580 - 39846642
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||||||| |||| | |||||| |||||||||||||||||||||  | |||||||| ||||    
T  39846580 tttacaggggaaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctaaaa 39846642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 46610066 - 46610008
Alignment:
Q  17 ttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaaccca 74  Q
    |||||||||| ||| | |||| || |||||||||||||||||||||| |||||||||||    
T  46610066 ttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccca 46610008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 54567768 - 54567802
Alignment:
Q  41 cctatattacagggggtaaagatctattaacccaa 75  Q
    |||||||||||||||||||||| ||||||||||||    
T  54567768 cctatattacagggggtaaagacctattaacccaa 54567802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 12767166 - 12767219
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctatta 69  Q
    |||||||||| ||||||  ||||| ||||||||||| |||||||||| ||||||    
T  12767166 tttacaggggaaaaatcagaaatgacctatattacaaggggtaaagacctatta 12767219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 14241263 - 14241214
Alignment:
Q  24 gggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||| || ||||| |||||||||||||||||||||| |||| |||||    
T  14241263 gggaaaaccggaaatgacctatattacagggggtaaagacctataaaccc 14241214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 14248821 - 14248874
Alignment:
Q  23 ggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaa 76  Q
    |||||||| || ||||| ||||| |||| ||||||||||| |||||||||||||    
T  14248821 ggggaaaaccggaaatgacctattttacggggggtaaagacctattaacccaaa 14248874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 71
Target Start/End: Original strand, 24910957 - 24910986
Alignment:
Q  42 ctatattacagggggtaaagatctattaac 71  Q
    ||||||||||||||||||||||||||||||    
T  24910957 ctatattacagggggtaaagatctattaac 24910986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 27760346 - 27760289
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||| |||||||| |  ||||| ||||||||||||||||||||||  |||||||||    
T  27760346 tttacaaggggaaaaccagaaatgacctatattacagggggtaaagacttattaaccc 27760289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 31073741 - 31073688
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    |||| ||||||||||||| ||||||||||| ||||||||   ||||||||||||    
T  31073741 ggggaaaaatcgaaaatgacctatattacatggggtaaaacactattaacccaa 31073688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 31797592 - 31797543
Alignment:
Q  24 gggaaaatcgaaaatggcctatattacaggggg-taaagatctattaacc 72  Q
    |||||||||||||||| | |||||||||||||| |||||| |||||||||    
T  31797592 gggaaaatcgaaaatgacatatattacagggggctaaagacctattaacc 31797543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 41749444 - 41749383
Alignment:
Q  16 tttacagggg-gaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaa 76  Q
    |||||||||| ||||||| ||| || ||||||||||| |||||||||  |||||||||||||    
T  41749444 tttacaggggagaaaatcaaaagtgacctatattacaaggggtaaaggcctattaacccaaa 41749383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 48418711 - 48418666
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    ||||||| ||||||||  |||||| |||||||||||||||||||||    
T  48418711 tttacagagggaaaataaaaaatgacctatattacagggggtaaag 48418666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 48489064 - 48489019
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    ||||||||||||||||  |||| | |||||||||||||||||||||    
T  48489064 tttacagggggaaaataaaaaacgacctatattacagggggtaaag 48489019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 9777645 - 9777697
Alignment:
Q  20 cagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    |||| |||||| |||||||| ||||||||||| || ||||||| |||||||||    
T  9777645 caggaggaaaaccgaaaatgacctatattacatggagtaaagaactattaacc 9777697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 19624019 - 19624067
Alignment:
Q  25 ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||| |||||||| |||||||||||| || |||||| ||||||||||    
T  19624019 ggaaaaccgaaaatgacctatattacagaggataaagacctattaaccc 19624067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 22949284 - 22949248
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaac 71  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  22949284 aaatgacctatattacagggggtaaagacctattaac 22949248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 25024587 - 25024539
Alignment:
Q  25 ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||| |||||||| | |||||||||||||||||||  ||||||||||    
T  25024587 ggaaaaccgaaaatgacatatattacagggggtaaagcactattaaccc 25024539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 31172338 - 31172294
Alignment:
Q  34 aaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||| ||||||||||||| |||||||  |||||||||||||||    
T  31172338 aaaatgacctatattacaggtggtaaaggcctattaacccaaaaa 31172294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 31293769 - 31293825
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    |||| |||| ||||||||||| || ||||||||| |||||||||||  |||||||||    
T  31293769 tttatagggagaaaatcgaaagtgtcctatattatagggggtaaagcactattaacc 31293825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 33898112 - 33898068
Alignment:
Q  34 aaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||| |||||||||||||||||||||  | |||||||||||||    
T  33898112 aaaatgacctatattacagggggtaaagcaccattaacccaaaaa 33898068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 43772854 - 43772905
Alignment:
Q  24 gggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaa 76  Q
    |||||||||| |||||  ||||||||| ||||||||||| |||||||||||||    
T  43772854 gggaaaatcggaaatgatctatattac-gggggtaaagacctattaacccaaa 43772905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 46596127 - 46596095
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||||||||| |||||||||||    
T  46596127 cctatattacagggggtaaagctctattaaccc 46596095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 4428 - 4487
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaa 76  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||| |||||||||||||    
T  4428 tttacagggggaaac-cgaaaatgacctatattacagggggtaaagacctattaacccaaa 4487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 4306 - 4249
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||| ||||||||| |  ||||| |||||||||||||| ||||||| ||||||||||    
T  4306 tttaccgggggaaaaccataaatgacctatattacagggagtaaagacctattaaccc 4249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 13114455 - 13114395
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaa 76  Q
    |||||||| | |||| |||||||| |||||||||||||||||||||| |||||||||||||    
T  13114455 tttacaggagaaaaaccgaaaatgacctatattacagggggtaaagacctattaacccaaa 13114395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 33751924 - 33751980
Alignment:
Q  18 tacagggggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  33751924 tacagggggaaaatcgaaaatgacctatattacagaggggtaaagacctattaaccc 33751980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 34715905 - 34715960
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||| |||||||||    
T  34715905 ttacagggggaaaatcggaaataacctatattacagggggtaaagaactattaacc 34715960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 22362945 - 22362994
Alignment:
Q  24 gggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  22362945 gggaaaatcgaaaatgacctatattacagggggtaaagcactattaaccc 22362994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 31851992 - 31852049
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattaca-gggggtaaagatctattaacc 72  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||||||| |||||||||    
T  31851992 tttacagggggaaaaccgaaaatgacctatattacaggggggtaaagacctattaacc 31852049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 29942444 - 29942500
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||| |  ||||| |||||||||||||||||||||| ||||||||||    
T  29942444 ttacagggggaaaaccagaaatgacctatattacagggggtaaagacctattaaccc 29942500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 31116530 - 31116475
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaa 77  Q
    ||||||||||||||||||  |||||||| |||||||||||| |||||||| |||||    
T  31116530 gggggaaaatcgaaaatgatctatattagagggggtaaagacctattaactcaaaa 31116475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 31851809 - 31851758
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||| |||||||| ||||||||||||||| |||||| ||||||||||    
T  31851809 gggggaaaaccgaaaatgacctatattacaggggataaagacctattaaccc 31851758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 10545889 - 10545831
Alignment:
Q  16 tttacagggggaaaa-tcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||   ||||||||||    
T  10545889 tttacagggggaaaaatcgaaaatgacctatattacagggggtaaaacactattaaccc 10545831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 24387760 - 24387822
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaa 77  Q
    ||||||| | |||||||  |||||  |||||||||||||||||||||| ||||||||||||||    
T  24387760 atttacaagaggaaaattaaaaataacctatattacagggggtaaagacctattaacccaaaa 24387822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 6000672 - 6000733
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||||||||||| | ||| ||  |||||||||||||||||||| ||||||||||| ||||    
T  6000672 ttacagggggaaaaccaaaagtgctctatattacagggggtaaagctctattaaccctaaaa 6000733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 10344102 - 10344049
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    |||||||||| |  ||||| |||||||||||||||||||||| |||||||||||    
T  10344102 agggggaaaaccagaaatgacctatattacagggggtaaagacctattaaccca 10344049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 5999769 - 5999717
Alignment:
Q  21 agggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| | |||||| ||||||||| ||||||||||| |||||||||||    
T  5999769 agggggaaaaccaaaaatgccctatattagagggggtaaagctctattaaccc 5999717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 13114624 - 13114680
Alignment:
Q  16 tttacaggg-ggaaaatcgaaaatggcctatattacagggggtaaagatctattaac 71  Q
    ||||||||| |||||| |||||||| | |||||||||||||||||||| ||||||||    
T  13114624 tttacagggaggaaaaccgaaaatgacatatattacagggggtaaagacctattaac 13114680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 14328645 - 14328705
Alignment:
Q  16 tttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaacccaa 75  Q
    ||||||||||| ||| | |||| || |||||||||||||||||||||| ||||||||||||    
T  14328645 tttacagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaacccaa 14328705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 14421655 - 14421715
Alignment:
Q  16 tttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaacccaa 75  Q
    ||||||||||| ||| | |||| || |||||||||||||||||||||| ||||||||||||    
T  14421655 tttacagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaacccaa 14421715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 19325670 - 19325614
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacc 72  Q
    ||||||||||||||| || |||||  ||| ||||||||||||||||| |||||||||    
T  19325670 tttacagggggaaaaccggaaatgatctaaattacagggggtaaagacctattaacc 19325614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 7922367 - 7922316
Alignment:
Q  23 ggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    |||||||| | |||||| ||||||||||||||| |||||| |||||||||||    
T  7922367 ggggaaaaccaaaaatgacctatattacaggggataaagacctattaaccca 7922316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 25400786 - 25400837
Alignment:
Q  25 ggaaaatcgaaaatggcctatattaca-gggggtaaagatctattaacccaa 75  Q
    |||||| |||||||| ||||||||||| ||||||||||| ||||||||||||    
T  25400786 ggaaaaccgaaaatgacctatattacaagggggtaaagacctattaacccaa 25400837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 33352615 - 33352674
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    |||||||||||||||   |||||| |||||||||||||||||||||  | ||||||||||    
T  33352615 tttacagggggaaaacaaaaaatgacctatattacagggggtaaagcaccattaacccaa 33352674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 56123 - 56169
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||| ||| || |||||||||||||||||||||| ||||||||||    
T  56123 aaaatcaaaagtgccctatattacagggggtaaagacctattaaccc 56169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 25562208 - 25562166
Alignment:
Q  19 acagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||||||||||||  |||||| |||||||||||||||||||||    
T  25562208 acagggggaaaataaaaaatgacctatattacagggggtaaag 25562166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 26101722 - 26101680
Alignment:
Q  19 acagggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    |||||||||||||  |||||| |||||||||||||||||||||    
T  26101722 acagggggaaaataaaaaatgacctatattacagggggtaaag 26101680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 32614218 - 32614172
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||| ||||||||||||||| ||||||||  ||||||||||    
T  32614218 aaaatcgaaagtggcctatattacagagggtaaaggcctattaaccc 32614172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 3593572 - 3593633
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaa 77  Q
    |||||||||| ||||   |||||| | |||||||||| ||||||||| ||||||||||||||    
T  3593572 tttacaggggaaaaacaaaaaatgacatatattacagagggtaaagacctattaacccaaaa 3593633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 16659571 - 16659514
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||| || ||||| |||||||||||| |||||||   ||||||||||    
T  16659571 tttacagggggaaaaccggaaatgacctatattacagagggtaaaatactattaaccc 16659514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 22574046 - 22574087
Alignment:
Q  32 cgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||  ||||||||||||||||||||| ||||||||||    
T  22574046 cgaaaatgatctatattacagggggtaaagacctattaaccc 22574087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 27967523 - 27967462
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaa 77  Q
    |||||||||||||||   || ||| |||||||||||||||||||||  | ||||||||||||    
T  27967523 tttacagggggaaaacaaaagatgacctatattacagggggtaaagcaccattaacccaaaa 27967462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 2033106 - 2033142
Alignment:
Q  24 gggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  2033106 gggaaaatcgaaaatgacctatattatagggggtaaa 2033142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 3063508 - 3063540
Alignment:
Q  41 cctatattacagggggtaaagatctattaaccc 73  Q
    |||||||||||||||||||||| ||||||||||    
T  3063508 cctatattacagggggtaaagacctattaaccc 3063540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 7313490 - 7313446
Alignment:
Q  34 aaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    |||||| |||||||||||||||||||||  | |||||||||||||    
T  7313490 aaaatgacctatattacagggggtaaagcaccattaacccaaaaa 7313446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 8237697 - 8237657
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacaggggg 56  Q
    |||||||||| |||| |||||||| ||||||||||||||||    
T  8237697 tttacaggggaaaaaccgaaaatgacctatattacaggggg 8237657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 10546179 - 10546223
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||| |||| |||||||| |||||||||||| |||||||    
T  10546179 tttacaggggaaaaaccgaaaatgacctatattacagagggtaaa 10546223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 10827093 - 10827057
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaac 71  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  10827093 aaatgacctatattacagggagtaaagatctattaac 10827057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 14925020 - 14924977
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||    
T  14925020 tttacagggagaaaatcgaaa-tgacctatattacagggggtaaa 14924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 14985308 - 14985352
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    ||||||||||  |||||||||||| | ||||||||||||||||||    
T  14985308 tttacaggggagaaatcgaaaatgacttatattacagggggtaaa 14985352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 17884131 - 17884079
Alignment:
Q  24 gggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaacccaa 75  Q
    |||||||||| ||||| |||||||||||| |||||||||  ||||||||||||    
T  17884131 gggaaaatcggaaatgacctatattacagaggggtaaaggactattaacccaa 17884079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 22366227 - 22366275
Alignment:
Q  25 ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||||| ||| || |||||||| ||||||||||||| ||||||||||    
T  22366227 ggaaaatcaaaagtgacctatattgcagggggtaaagacctattaaccc 22366275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 23270220 - 23270268
Alignment:
Q  27 aaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    |||||| ||| || ||||||||| |||||||||||| ||||||||||||    
T  23270220 aaaatcaaaagtgacctatattaaagggggtaaagacctattaacccaa 23270268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 34826 - 34885
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaa 75  Q
    |||||||||||||||  | ||||| |||||||||||||||||||||| ||||||||||||    
T  34826 tttacagggggaaaactggaaatgacctatattacagggggtaaagacctattaacccaa 34885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 34627 - 34569
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattac-agggggtaaagatctattaaccc 73  Q
    ||||||||||||||| || ||||| |||||||||| | |||||||||| ||||||||||    
T  34627 tttacagggggaaaaccggaaatgacctatattacaaaggggtaaagacctattaaccc 34569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 4157 - 4213
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| || ||||| |||||||||||||||||||||| |||||||||| ||||    
T  4157 gggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccctaaaa 4213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 3972 - 3914
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacag-ggggtaaagatctattaaccc 73  Q
    ||||||||||||||| || ||||| |||||||||||| |||||||||| ||||||||||    
T  3972 tttacagggggaaaaccggaaatgacctatattacaggggggtaaagacctattaaccc 3914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000007; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 332122 - 332078
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  332122 tttacagggggaaaaccgaaaatgacctatattacagggggtaaa 332078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 432443 - 432395
Alignment:
Q  25 ggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||| |||||||| |||||||||||||||||||||  ||||||||||    
T  432443 ggaaaaccgaaaatgacctatattacagggggtaaagtactattaaccc 432395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 332389 - 332441
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    ||||||||| || ||||| |||||||||| ||||||||||  |||||||||||    
T  332389 gggggaaaaccggaaatgacctatattactgggggtaaagcactattaaccca 332441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 7916 - 7854
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||||||||| |  ||||| | |||||||||||||||||||| |||||||||| ||||    
T  7916 tttacagggggaaaaccagaaatgacatatattacagggggtaaagacctattaaccctaaaa 7854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 8095 - 8152
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||||| |||||||| |  ||||| |||||||||||| ||||||||| ||||||||||    
T  8095 tttacaaggggaaaaccagaaatgacctatattacagtgggtaaagacctattaaccc 8152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 91108 - 91050
Alignment:
Q  15 atttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||||||||    ||||| |||||||||||||||||||||| ||||||||||    
T  91108 atttacagggggaaaactagaaatgacctatattacagggggtaaagacctattaaccc 91050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 174603 - 174647
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||    
T  174603 tttacagggggaaaatcggaaatgacctatattactgggggtaaa 174647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 212564 - 212512
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccca 74  Q
    |||| ||||||||||||| ||||||||||||||||||||   |||||||||||    
T  212564 ggggtaaaatcgaaaatgacctatattacagggggtaaaacactattaaccca 212512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 14453 - 14492
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaag 61  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  14453 gggggaaaatcaaaaatgacctatattacagggggtaaag 14492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 1865 - 1826
Alignment:
Q  35 aaatggcctatattacagggggtaaagatctattaaccca 74  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  1865 aaatgacctatattacagggggtaaagacctattaaccca 1826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 10138 - 10080
Alignment:
Q  16 tttacagggggaaaatcgaaaa-tggcctatattacagggggtaaagatctattaaccc 73  Q
    ||||||||||| ||| | |||| || |||||||||||||||||||||| ||||||||||    
T  10138 tttacagggggcaaaactaaaagtgccctatattacagggggtaaagacctattaaccc 10080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 6868 - 6810
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacaggggg-taaagatctattaaccc 73  Q
    ||||||||||||||| |  ||||| |||||||||||||||| |||||| ||||||||||    
T  6868 tttacagggggaaaaccataaatgacctatattacagggggataaagacctattaaccc 6810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 18700 - 18643
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaaccc 73  Q
    |||| ||||| ||||||||||||| ||||||||||||| ||||||   ||||||||||    
T  18700 tttataggggaaaaatcgaaaatgacctatattacaggaggtaaaacactattaaccc 18643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 38668 - 38607
Alignment:
Q  17 ttacagggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||| |||||||| || ||||| |||||||||||| || |||| |||| ||||||||||||    
T  38668 ttacatggggaaaaccggaaatgacctatattacagaggataaatatctgttaacccaaaaa 38607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 642 - 698
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| |  ||||| |||||||||||| ||||||||| |||||||||| ||||    
T  642 gggggaaaaccataaatgacctatattacagagggtaaagacctattaaccctaaaa 698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 29683 - 29727
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacagggggtaaa 60  Q
    |||||||||||||||   |||||| ||||||||||||||||||||    
T  29683 tttacagggggaaaacaaaaaatgacctatattacagggggtaaa 29727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 53423 - 53367
Alignment:
Q  22 gggggaaaatcgaaaatggcctatattacagggggtaaagatctattaacccaaaaa 78  Q
    ||||||||| ||||| | ||| | |||||||||||||||||  ||||||||||||||    
T  53423 gggggaaaaccgaaactcgcccaaattacagggggtaaagacatattaacccaaaaa 53367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 150044 - 150004
Alignment:
Q  16 tttacagggggaaaatcgaaaatggcctatattacaggggg 56  Q
    ||||||||||||||| | |||||| ||||||||||||||||    
T  150044 tttacagggggaaaaccaaaaatgacctatattacaggggg 150004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University