View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17992_low_34 (Length: 228)
Name: NF17992_low_34
Description: NF17992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17992_low_34 |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 48258237 - 48258435
Alignment:
| Q |
15 |
tatatatgatggtggacttgggttcagaaacataaggagcttcattgaagcattcttggctaagcaattttggaggcttcacactgagcctattactatg |
114 |
Q |
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| T |
48258237 |
tatatatgatggtggacttgggttcagaaacataaggagcttcattgaagcattcttggctaagcaattttggaggcttcacactgagcctattactatg |
48258336 |
T |
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| Q |
115 |
cttgctaaatgactcaaggtaatatactttccccatgttgataatgggtttaaagtcttaacccaaaacttggaataaaaccttgattgacactatttt |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
48258337 |
cttgctaaatgactcaaggtaatatactttccccatgttgataatgggtttaaagtcttaacccaaaacttggaataaaaccttgtttgacactatttt |
48258435 |
T |
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