View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17995_low_9 (Length: 336)

Name: NF17995_low_9
Description: NF17995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17995_low_9
NF17995_low_9
[»] chr8 (31 HSPs)
chr8 (16-205)||(24715446-24715631)
chr8 (16-199)||(23235899-23236078)
chr8 (16-173)||(25706806-25706960)
chr8 (16-101)||(16571504-16571589)
chr8 (16-173)||(25402297-25402451)
chr8 (16-72)||(25857891-25857947)
chr8 (16-173)||(25373129-25373281)
chr8 (16-109)||(6665123-6665216)
chr8 (16-109)||(6672787-6672880)
chr8 (16-72)||(25644812-25644868)
chr8 (16-101)||(13387284-13387369)
chr8 (16-109)||(20026178-20026271)
chr8 (16-72)||(14890013-14890069)
chr8 (16-72)||(16738694-16738750)
chr8 (16-186)||(32024152-32024318)
chr8 (16-99)||(20727251-20727334)
chr8 (16-99)||(20740149-20740232)
chr8 (16-67)||(22155615-22155666)
chr8 (16-109)||(12846633-12846726)
chr8 (16-124)||(6032587-6032695)
chr8 (16-72)||(20735130-20735186)
chr8 (16-72)||(20743688-20743744)
chr8 (16-72)||(25851695-25851751)
chr8 (16-124)||(27806485-27806593)
chr8 (16-72)||(31967652-31967708)
chr8 (16-72)||(32001148-32001204)
chr8 (18-171)||(15448160-15448310)
chr8 (18-124)||(39639146-39639252)
chr8 (18-219)||(23266021-23266223)
chr8 (16-72)||(32008105-32008161)
chr8 (18-124)||(24483484-24483590)
[»] chr6 (50 HSPs)
chr6 (16-194)||(4466489-4466662)
chr6 (248-321)||(3375800-3375875)
chr6 (16-124)||(3916148-3916256)
chr6 (16-170)||(1628208-1628358)
chr6 (16-167)||(10624301-10624446)
chr6 (16-171)||(22325270-22325424)
chr6 (18-186)||(30435269-30435435)
chr6 (18-171)||(20038786-20038936)
chr6 (16-186)||(12393612-12393777)
chr6 (16-109)||(18869562-18869655)
chr6 (16-109)||(20073303-20073396)
chr6 (16-109)||(22597770-22597863)
chr6 (16-72)||(33253708-33253764)
chr6 (16-200)||(18963423-18963604)
chr6 (18-171)||(20046593-20046743)
chr6 (16-109)||(2408578-2408671)
chr6 (16-171)||(19715047-19715199)
chr6 (16-171)||(19721240-19721392)
chr6 (16-109)||(34270878-34270971)
chr6 (16-72)||(22402961-22403017)
chr6 (19-186)||(26897866-26898030)
chr6 (16-72)||(28701515-28701571)
chr6 (16-72)||(35025810-35025866)
chr6 (17-72)||(12666182-12666237)
chr6 (16-171)||(25505042-25505196)
chr6 (20-124)||(16323685-16323789)
chr6 (16-124)||(18386817-18386925)
chr6 (16-124)||(18910478-18910586)
chr6 (16-72)||(22763484-22763540)
chr6 (16-72)||(22777736-22777792)
chr6 (18-102)||(24141602-24141686)
chr6 (18-102)||(24148092-24148176)
chr6 (16-60)||(27643792-27643836)
chr6 (18-129)||(22073967-22074078)
chr6 (16-67)||(22231218-22231269)
chr6 (16-205)||(28003246-28003428)
chr6 (16-200)||(26980388-26980571)
chr6 (16-200)||(27072778-27072961)
chr6 (18-186)||(9129814-9129978)
chr6 (18-186)||(9143650-9143814)
chr6 (19-72)||(21748252-21748305)
chr6 (16-109)||(26844565-26844658)
chr6 (16-124)||(614017-614125)
chr6 (16-124)||(621937-622045)
chr6 (16-171)||(10983555-10983708)
chr6 (16-171)||(25492969-25493123)
chr6 (19-65)||(18229225-18229271)
chr6 (16-124)||(8277384-8277492)
chr6 (16-72)||(12664037-12664093)
chr6 (16-100)||(22331023-22331107)
[»] chr4 (42 HSPs)
chr4 (16-182)||(8815957-8816122)
chr4 (16-171)||(9186248-9186401)
chr4 (16-124)||(19736574-19736682)
chr4 (16-173)||(47877749-47877904)
chr4 (16-171)||(44623895-44624050)
chr4 (16-109)||(745892-745985)
chr4 (18-186)||(3834578-3834743)
chr4 (16-109)||(55790965-55791058)
chr4 (16-72)||(20555303-20555359)
chr4 (16-72)||(22140017-22140073)
chr4 (16-72)||(22151931-22151987)
chr4 (16-171)||(25986544-25986697)
chr4 (16-186)||(3441438-3441606)
chr4 (16-109)||(739802-739895)
chr4 (16-172)||(18217527-18217681)
chr4 (16-72)||(3381069-3381125)
chr4 (16-132)||(14899647-14899763)
chr4 (16-72)||(15080658-15080714)
chr4 (16-72)||(20561947-20562003)
chr4 (16-67)||(49891822-49891873)
chr4 (16-173)||(5063591-5063746)
chr4 (16-66)||(55800485-55800535)
chr4 (16-109)||(736375-736468)
chr4 (16-109)||(3396168-3396261)
chr4 (16-132)||(15877934-15878048)
chr4 (16-72)||(3387811-3387867)
chr4 (16-72)||(39743542-39743598)
chr4 (16-67)||(3358620-3358671)
chr4 (16-67)||(3368286-3368337)
chr4 (16-109)||(10219528-10219621)
chr4 (16-129)||(14926937-14927050)
chr4 (16-186)||(20840705-20840877)
chr4 (18-200)||(55791781-55791959)
chr4 (16-124)||(18093-18201)
chr4 (16-124)||(9191665-9191773)
chr4 (19-186)||(16369254-16369417)
chr4 (16-55)||(11599717-11599756)
chr4 (16-102)||(15887549-15887635)
chr4 (23-84)||(39045717-39045778)
chr4 (16-109)||(40815546-40815639)
chr4 (16-171)||(7946067-7946221)
chr4 (18-173)||(23994658-23994811)
[»] scaffold0040 (1 HSPs)
scaffold0040 (16-201)||(24610-24792)
[»] chr5 (42 HSPs)
chr5 (16-201)||(30250603-30250783)
chr5 (16-109)||(37578031-37578124)
chr5 (16-171)||(23376830-23376983)
chr5 (16-205)||(10059197-10059379)
chr5 (16-109)||(21746504-21746597)
chr5 (16-109)||(24060467-24060560)
chr5 (16-109)||(37587141-37587234)
chr5 (16-173)||(38226481-38226636)
chr5 (16-72)||(20638475-20638531)
chr5 (18-186)||(23575334-23575500)
chr5 (18-124)||(21826094-21826200)
chr5 (16-109)||(34461455-34461548)
chr5 (16-109)||(34475712-34475805)
chr5 (16-109)||(36433920-36434013)
chr5 (16-72)||(29894496-29894552)
chr5 (16-72)||(29903218-29903274)
chr5 (16-72)||(36449634-36449690)
chr5 (16-72)||(36456022-36456078)
chr5 (20-171)||(1799536-1799686)
chr5 (20-171)||(1807269-1807419)
chr5 (16-186)||(7253222-7253389)
chr5 (16-186)||(7260665-7260832)
chr5 (16-171)||(15955544-15955698)
chr5 (16-132)||(17963738-17963854)
chr5 (16-186)||(21829192-21829360)
chr5 (17-67)||(22705915-22705965)
chr5 (16-66)||(37049753-37049803)
chr5 (16-101)||(40016325-40016410)
chr5 (16-171)||(22957693-22957846)
chr5 (16-171)||(25527578-25527731)
chr5 (16-102)||(17949849-17949935)
chr5 (18-171)||(21727057-21727208)
chr5 (18-124)||(40183177-40183283)
chr5 (16-129)||(25448510-25448623)
chr5 (18-171)||(25827371-25827523)
chr5 (16-124)||(20084635-20084743)
chr5 (16-124)||(20098237-20098345)
chr5 (16-171)||(23689513-23689666)
chr5 (16-171)||(25534262-25534415)
chr5 (18-66)||(25675799-25675847)
chr5 (16-124)||(26546483-26546591)
chr5 (18-102)||(26870429-26870513)
[»] chr3 (63 HSPs)
chr3 (16-167)||(12997721-12997870)
chr3 (16-201)||(2227067-2227247)
chr3 (16-130)||(14879804-14879916)
chr3 (16-152)||(17216732-17216865)
chr3 (18-171)||(2253234-2253386)
chr3 (16-109)||(3676906-3676999)
chr3 (16-109)||(3686041-3686134)
chr3 (16-109)||(6956673-6956766)
chr3 (16-109)||(16469284-16469377)
chr3 (18-200)||(19835315-19835494)
chr3 (16-109)||(20435909-20436002)
chr3 (16-109)||(20449835-20449928)
chr3 (16-109)||(41433075-41433168)
chr3 (16-109)||(41441572-41441665)
chr3 (16-124)||(8607557-8607665)
chr3 (16-108)||(12702918-12703010)
chr3 (16-72)||(14886448-14886504)
chr3 (16-72)||(21637202-21637258)
chr3 (16-72)||(27874135-27874191)
chr3 (18-186)||(46391470-46391637)
chr3 (18-186)||(46399218-46399385)
chr3 (16-171)||(48059242-48059398)
chr3 (16-171)||(262723-262876)
chr3 (16-171)||(9523869-9524023)
chr3 (16-109)||(6970953-6971046)
chr3 (16-109)||(14738014-14738107)
chr3 (16-132)||(14891655-14891769)
chr3 (16-109)||(30013483-30013576)
chr3 (16-109)||(30022909-30023002)
chr3 (16-72)||(69540-69596)
chr3 (16-72)||(75633-75689)
chr3 (16-124)||(8614020-8614128)
chr3 (16-72)||(13104262-13104318)
chr3 (16-72)||(13110418-13110474)
chr3 (16-171)||(9553584-9553738)
chr3 (16-171)||(46373034-46373188)
chr3 (16-171)||(46387161-46387315)
chr3 (16-167)||(47730520-47730669)
chr3 (18-124)||(18709662-18709768)
chr3 (16-172)||(49965149-49965302)
chr3 (18-171)||(20602078-20602231)
chr3 (16-101)||(44362200-44362284)
chr3 (16-72)||(3412637-3412693)
chr3 (16-124)||(12470957-12471065)
chr3 (18-129)||(29098-29208)
chr3 (16-131)||(11182821-11182936)
chr3 (16-59)||(15985423-15985466)
chr3 (16-59)||(26385390-26385433)
chr3 (16-171)||(37469313-37469464)
chr3 (18-124)||(5944112-5944218)
chr3 (18-124)||(5958224-5958330)
chr3 (18-124)||(15925542-15925648)
chr3 (18-67)||(8625725-8625774)
chr3 (16-109)||(16016083-16016176)
chr3 (18-102)||(8617853-8617937)
chr3 (16-124)||(12559235-12559343)
chr3 (18-124)||(4312171-4312277)
chr3 (16-102)||(14322736-14322822)
chr3 (18-124)||(15621837-15621943)
chr3 (18-124)||(18694287-18694393)
chr3 (18-67)||(23280870-23280919)
chr3 (18-67)||(23286769-23286818)
chr3 (17-109)||(15577321-15577413)
[»] chr7 (58 HSPs)
chr7 (16-101)||(12392428-12392513)
chr7 (16-171)||(4830921-4831074)
chr7 (18-186)||(846734-846899)
chr7 (18-186)||(854109-854274)
chr7 (18-186)||(1212113-1212278)
chr7 (30-186)||(839571-839724)
chr7 (30-186)||(1204751-1204904)
chr7 (28-101)||(12408293-12408366)
chr7 (16-109)||(12605981-12606074)
chr7 (16-109)||(16263697-16263790)
chr7 (16-109)||(16280390-16280483)
chr7 (16-109)||(16294592-16294685)
chr7 (16-109)||(17465125-17465218)
chr7 (16-109)||(17587996-17588089)
chr7 (16-124)||(42629393-42629501)
chr7 (16-102)||(26125582-26125668)
chr7 (16-109)||(791876-791969)
chr7 (16-109)||(4889151-4889244)
chr7 (16-109)||(7341882-7341975)
chr7 (16-109)||(16271363-16271456)
chr7 (16-109)||(37288022-37288115)
chr7 (16-186)||(43907597-43907761)
chr7 (16-174)||(355835-355991)
chr7 (16-124)||(34131379-34131487)
chr7 (16-124)||(34137673-34137780)
chr7 (16-171)||(36900427-36900580)
chr7 (16-66)||(44417870-44417920)
chr7 (16-109)||(12585762-12585855)
chr7 (16-72)||(1857308-1857364)
chr7 (16-124)||(8911197-8911305)
chr7 (16-72)||(18777672-18777728)
chr7 (16-124)||(19096115-19096222)
chr7 (16-72)||(23445728-23445784)
chr7 (16-124)||(30363173-30363281)
chr7 (16-124)||(30377238-30377346)
chr7 (23-99)||(44411628-44411704)
chr7 (16-67)||(3422346-3422397)
chr7 (16-67)||(3431502-3431553)
chr7 (16-171)||(9462327-9462481)
chr7 (16-171)||(9476085-9476239)
chr7 (16-67)||(20029270-20029321)
chr7 (16-186)||(28416511-28416678)
chr7 (16-130)||(8955420-8955534)
chr7 (18-186)||(19242349-19242513)
chr7 (18-124)||(42015728-42015834)
chr7 (24-109)||(805711-805796)
chr7 (50-186)||(17014005-17014138)
chr7 (18-186)||(23876649-23876814)
chr7 (18-186)||(23885505-23885670)
chr7 (16-167)||(6109469-6109616)
chr7 (16-72)||(12595536-12595592)
chr7 (16-124)||(16386628-16386736)
chr7 (16-124)||(16400755-16400863)
chr7 (16-67)||(46298798-46298849)
chr7 (18-171)||(3334680-3334831)
chr7 (18-124)||(4854375-4854481)
chr7 (45-111)||(11586823-11586889)
chr7 (16-171)||(6645542-6645694)
[»] scaffold0202 (1 HSPs)
scaffold0202 (16-171)||(25638-25791)
[»] chr2 (30 HSPs)
chr2 (16-186)||(18501605-18501772)
chr2 (16-109)||(21749087-21749180)
chr2 (16-109)||(21753664-21753757)
chr2 (16-109)||(21767815-21767908)
chr2 (18-186)||(39651409-39651574)
chr2 (16-173)||(15812070-15812225)
chr2 (16-173)||(24868144-24868298)
chr2 (16-201)||(40389174-40389355)
chr2 (16-109)||(35082220-35082313)
chr2 (16-124)||(18991464-18991572)
chr2 (16-124)||(27342024-27342132)
chr2 (16-124)||(27343134-27343242)
chr2 (16-171)||(5872789-5872942)
chr2 (18-172)||(22936175-22936327)
chr2 (18-172)||(22942138-22942290)
chr2 (18-172)||(22956033-22956185)
chr2 (16-72)||(5869775-5869831)
chr2 (16-72)||(20273634-20273690)
chr2 (16-72)||(29586556-29586612)
chr2 (16-130)||(378380-378494)
chr2 (16-186)||(21070357-21070525)
chr2 (18-186)||(12376425-12376590)
chr2 (18-186)||(12390252-12390417)
chr2 (16-148)||(28459516-28459644)
chr2 (16-124)||(17331635-17331743)
chr2 (18-171)||(18971749-18971899)
chr2 (16-186)||(36736675-36736843)
chr2 (18-186)||(12368508-12368673)
chr2 (16-171)||(19882971-19883123)
chr2 (16-171)||(45487226-45487379)
[»] scaffold2175 (1 HSPs)
scaffold2175 (16-186)||(572-738)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-171)||(15482-15635)
[»] chr1 (35 HSPs)
chr1 (16-99)||(2333961-2334044)
chr1 (16-122)||(20430745-20430851)
chr1 (18-186)||(26196889-26197052)
chr1 (16-109)||(2686862-2686955)
chr1 (16-109)||(20312028-20312121)
chr1 (16-72)||(35077131-35077187)
chr1 (16-132)||(44319658-44319773)
chr1 (16-171)||(9009791-9009945)
chr1 (18-129)||(13187709-13187820)
chr1 (18-124)||(20978032-20978138)
chr1 (16-72)||(18099690-18099746)
chr1 (16-72)||(18702848-18702904)
chr1 (16-171)||(22429292-22429445)
chr1 (16-72)||(44831178-44831234)
chr1 (18-124)||(22838070-22838176)
chr1 (19-109)||(49934469-49934559)
chr1 (18-186)||(6203690-6203855)
chr1 (16-124)||(20640276-20640384)
chr1 (16-171)||(22110585-22110738)
chr1 (16-171)||(22114434-22114587)
chr1 (16-186)||(45499005-45499172)
chr1 (16-130)||(5622300-5622414)
chr1 (16-130)||(5636439-5636553)
chr1 (16-171)||(1962909-1963063)
chr1 (18-186)||(6195839-6196004)
chr1 (16-109)||(27171196-27171289)
chr1 (16-124)||(2415318-2415426)
chr1 (18-129)||(16886797-16886908)
chr1 (16-171)||(39456348-39456502)
chr1 (19-171)||(1957218-1957369)
chr1 (18-124)||(22568781-22568887)
chr1 (18-124)||(25924688-25924794)
chr1 (16-186)||(14803299-14803466)
chr1 (16-186)||(14812173-14812340)
chr1 (16-72)||(19368795-19368851)
[»] scaffold0799 (2 HSPs)
scaffold0799 (16-109)||(4548-4641)
scaffold0799 (18-200)||(5364-5542)
[»] scaffold0560 (1 HSPs)
scaffold0560 (16-109)||(10714-10807)
[»] scaffold0014 (3 HSPs)
scaffold0014 (16-109)||(186645-186738)
scaffold0014 (18-186)||(5690-5854)
scaffold0014 (16-109)||(170141-170234)
[»] scaffold0083 (1 HSPs)
scaffold0083 (16-72)||(25119-25175)
[»] scaffold0067 (1 HSPs)
scaffold0067 (16-186)||(42426-42592)
[»] scaffold0039 (1 HSPs)
scaffold0039 (16-124)||(88443-88551)
[»] scaffold0034 (1 HSPs)
scaffold0034 (18-173)||(117308-117461)
[»] scaffold0478 (1 HSPs)
scaffold0478 (16-99)||(1121-1204)
[»] scaffold0043 (2 HSPs)
scaffold0043 (16-71)||(31937-31992)
scaffold0043 (16-132)||(91690-91806)
[»] scaffold0582 (1 HSPs)
scaffold0582 (16-109)||(5924-6017)
[»] scaffold0107 (1 HSPs)
scaffold0107 (16-200)||(887-1070)
[»] scaffold0098 (1 HSPs)
scaffold0098 (16-109)||(28897-28990)
[»] scaffold0051 (1 HSPs)
scaffold0051 (16-109)||(56753-56846)
[»] scaffold1494 (1 HSPs)
scaffold1494 (16-124)||(61-169)
[»] scaffold0393 (1 HSPs)
scaffold0393 (16-72)||(2872-2928)
[»] scaffold0132 (1 HSPs)
scaffold0132 (16-124)||(30256-30364)
[»] scaffold0101 (1 HSPs)
scaffold0101 (16-124)||(14736-14843)
[»] scaffold0077 (1 HSPs)
scaffold0077 (16-72)||(1688-1744)
[»] scaffold0029 (2 HSPs)
scaffold0029 (16-72)||(36149-36205)
scaffold0029 (18-200)||(101252-101432)
[»] scaffold0028 (1 HSPs)
scaffold0028 (16-72)||(69295-69351)
[»] scaffold0503 (1 HSPs)
scaffold0503 (18-171)||(4406-4556)
[»] scaffold0484 (1 HSPs)
scaffold0484 (16-99)||(9409-9492)
[»] scaffold0378 (2 HSPs)
scaffold0378 (16-186)||(2870-3037)
scaffold0378 (16-186)||(15350-15517)
[»] scaffold0094 (1 HSPs)
scaffold0094 (16-171)||(22473-22627)
[»] scaffold1699 (1 HSPs)
scaffold1699 (16-66)||(1-51)
[»] scaffold0096 (1 HSPs)
scaffold0096 (18-72)||(7-61)
[»] scaffold0005 (1 HSPs)
scaffold0005 (18-170)||(299198-299347)
[»] scaffold0473 (2 HSPs)
scaffold0473 (18-186)||(858-1023)
scaffold0473 (18-186)||(6984-7149)
[»] scaffold0125 (2 HSPs)
scaffold0125 (16-109)||(10296-10389)
scaffold0125 (16-109)||(17218-17311)
[»] scaffold0027 (1 HSPs)
scaffold0027 (16-72)||(24954-25010)
[»] scaffold0002 (2 HSPs)
scaffold0002 (18-186)||(298658-298825)
scaffold0002 (18-67)||(360855-360904)
[»] scaffold0974 (1 HSPs)
scaffold0974 (16-170)||(3256-3408)
[»] scaffold0458 (1 HSPs)
scaffold0458 (16-171)||(7215-7369)
[»] scaffold0361 (1 HSPs)
scaffold0361 (16-67)||(2418-2469)
[»] scaffold0119 (1 HSPs)
scaffold0119 (16-99)||(38800-38883)
[»] scaffold0019 (2 HSPs)
scaffold0019 (16-67)||(12178-12229)
scaffold0019 (16-67)||(20434-20485)
[»] scaffold0573 (1 HSPs)
scaffold0573 (16-129)||(1785-1898)
[»] scaffold0351 (1 HSPs)
scaffold0351 (16-65)||(1277-1326)
[»] scaffold0243 (1 HSPs)
scaffold0243 (16-129)||(22890-23003)
[»] scaffold0092 (1 HSPs)
scaffold0092 (18-171)||(15234-15385)
[»] scaffold0770 (1 HSPs)
scaffold0770 (18-200)||(2948-3128)
[»] scaffold0422 (1 HSPs)
scaffold0422 (16-124)||(4474-4582)
[»] scaffold0327 (1 HSPs)
scaffold0327 (16-124)||(2299-2407)
[»] scaffold0278 (2 HSPs)
scaffold0278 (16-72)||(14091-14147)
scaffold0278 (16-72)||(17425-17481)
[»] scaffold0075 (1 HSPs)
scaffold0075 (16-124)||(57791-57899)
[»] scaffold0065 (1 HSPs)
scaffold0065 (18-131)||(39806-39921)
[»] scaffold1818 (1 HSPs)
scaffold1818 (16-123)||(876-983)
[»] scaffold0535 (1 HSPs)
scaffold0535 (29-168)||(10957-11095)
[»] scaffold0138 (2 HSPs)
scaffold0138 (16-67)||(6278-6329)
scaffold0138 (16-67)||(9547-9598)
[»] scaffold0085 (1 HSPs)
scaffold0085 (22-105)||(17336-17419)
[»] scaffold0050 (1 HSPs)
scaffold0050 (16-67)||(39046-39097)
[»] scaffold1623 (1 HSPs)
scaffold1623 (18-124)||(261-367)
[»] scaffold1473 (1 HSPs)
scaffold1473 (16-165)||(1083-1228)
[»] scaffold0755 (1 HSPs)
scaffold0755 (18-124)||(2711-2817)
[»] scaffold0643 (1 HSPs)
scaffold0643 (18-171)||(548-699)
[»] scaffold0435 (1 HSPs)
scaffold0435 (18-124)||(6373-6479)
[»] scaffold0183 (1 HSPs)
scaffold0183 (16-102)||(29831-29917)
[»] scaffold0114 (1 HSPs)
scaffold0114 (18-174)||(33020-33173)
[»] scaffold2020 (1 HSPs)
scaffold2020 (47-112)||(678-743)
[»] scaffold0031 (1 HSPs)
scaffold0031 (16-57)||(32405-32446)
[»] scaffold0009 (1 HSPs)
scaffold0009 (47-112)||(164752-164817)
[»] scaffold0306 (1 HSPs)
scaffold0306 (16-124)||(17027-17135)
[»] scaffold0104 (1 HSPs)
scaffold0104 (18-102)||(11460-11544)


Alignment Details
Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 24715446 - 24715631
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| | |||||||||| | | |||||||||||||||||||||| ||||  ||| |||||| | |||| |||||||||  ||||||||||||    
T  24715446 atcaagaggttcccatagaatactatggatatttagggtgctaacaccttccctaaatataactaacccccgaaccctaaatcttt--aaaatgtggtaa 24715543  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaagctaactaaatagctatga 205  Q
    || ||||||  ||||||| |||||||| ||||||||  |||||||||||||||||||| || |||||||| ||||| |||||| ||||||    
T  24715544 ttcgaactt--ttttccactttcttttgaaaaattagaagttcaatcgtgaaataaaaatagtgagtcaatgctaattaaatatctatga 24715631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 23236078 - 23235899
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||||||||  |||| |||| |||| ||| |||| |||||| |||||||||||||| |    
T  23236078 atcaagaggttctcgtagaatattacgaacgtctagggtgctaacaccttcgctaaatgtaactaactctcgaaccctaaatc-ttttaaaatgtggtga 23235980  T
Q  116 ttt-gaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaagctaactaaatag 199  Q
    ||| |||||  |||||||  |||||||| ||||||||| |||||| ||||| |||||||||| |||||||| |||||||||||||    
T  23235979 tttagaact--tttttcc-ctttcttttgaaaaattaaaagttcagtcgtg-aataaaattagtgagtcaatgctaactaaatag 23235899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 25706806 - 25706960
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||  | ||||  ||||| ||| |||||||||| |    
T  25706806 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaacctccgaacccaaaatc-tttaaaaatgtggt-a 25706903  T
Q  116 tttgaacttctttttccaatttcttt-taaaaaattaacagttcaatcgtgaaataaaa 173  Q
    |||||||  ||||||||| |||||||  |||||||||| |||||| |||||||||||||    
T  25706904 tttgaac--ctttttccactttctttcgaaaaaattaaaagttcagtcgtgaaataaaa 25706960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 16571589 - 16571504
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatcttt 101  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||  ||||| | |||| |||||||||    
T  16571589 atcaagaggttctcgttgaatactacgaacgtttagggtgctaacaccttccctaaacgtaacaaacccccgaaccctaaatcttt 16571504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 25402297 - 25402451
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||| ||||| |||||| || |||||||||||||||||||||| ||||  |||  ||||| | ||||  ||||| ||| |||||||||| |    
T  25402297 atcaagaggttcttgtagagtactactaatatttagggtgctaacaccttccctaaatataaccaacccccgaacccaaaatc-tttaaaaatgtggt-a 25402394  T
Q  116 tttgaacttctttttccaatttcttt-taaaaaattaacagttcaatcgtgaaataaaa 173  Q
    |||||||  ||||||||| |||||||  |||||||||| |||||| |||||||||||||    
T  25402395 tttgaac--ctttttccactttctttcgaaaaaattaaaagttcagtcgtgaaataaaa 25402451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 25857947 - 25857891
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  25857947 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccttaaa 25857891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 25373129 - 25373281
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||||||| ||||  |||  ||||| | ||||  ||||| | | |||||||||| |    
T  25373129 atcaagaggttctcgtagagtactactaatatttagggtgctaacaccttccctaaatataaccaacccccgaacccaaaatc-tataaaaatgtggt-a 25373226  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaa 173  Q
    |||||||  ||||||||| | | ||| |||||||||| |||||| |||||||||||||    
T  25373227 tttgaac--ctttttccactct-tttgaaaaaattaaaagttcagtcgtgaaataaaa 25373281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 6665123 - 6665216
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  6665123 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 6665216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 6672787 - 6672880
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  6672787 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 6672880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 25644812 - 25644868
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  25644812 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaa 25644868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 13387284 - 13387369
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatcttt 101  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||    
T  13387284 atcaaaaggttctcgtagaatactacgaatatttagggtgctaataccttccctaaatataacaaacccccgaaccctaaatcttt 13387369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 20026271 - 20026178
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| | ||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  20026271 atcaagaggttctcgtagagttctacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 20026178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 14890069 - 14890013
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  14890069 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 14890013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 16738694 - 16738750
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||| ||||| ||||    
T  16738694 atcaagaggttctcgtagagtactacgaatatttagggtgctaacatcttccctaaa 16738750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 32024318 - 32024152
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||  ||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  32024318 atcaagaggttcctgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 32024219  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||| |||  ||  ||||||   |||||||||  ||||| ||||||||| |||||| |||||||||    
T  32024218 tttgaacttttttcccctttttctt---aaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 32024152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 20727251 - 20727334
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatct 99  Q
    |||||||| |||||||||| ||||||||| |||||||||| ||| ||||||||||||  |||  ||||| |||||| |||||||    
T  20727251 atcaagagattctcgtagagtactacgaatatttagggtgataataccttccttaaatataaccaacccccaaaccctaaatct 20727334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 20740149 - 20740232
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatct 99  Q
    |||||||| |||||||||| ||||||||| |||||||||| ||| ||||||||||||  |||  ||||| |||||| |||||||    
T  20740149 atcaagagattctcgtagagtactacgaatatttagggtgataataccttccttaaatataaccaacccccaaaccctaaatct 20740232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 22155666 - 22155615
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  22155666 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttcc 22155615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 12846633 - 12846726
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  12846633 atcaagaggttctcgtagagtactacgaatatttagggtgataaaaccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 12846726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 6032587 - 6032695
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  | |||||||||||||||| |  | |||| |||| | | |||| |||||||||| |||||| ||||     
T  6032587 atcaagaggttcccgtagagtactacggacataaatggtgctaacaccttccctttatgtaactaactcccgaaccctaaatcttttcaaaatggggtag 6032686  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  6032687 tttgaactt 6032695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 20735130 - 20735186
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||| | ||||||||||    
T  20735130 atcaagaggttctcgtagagtactacgaatatttagggtgataatatcttccttaaa 20735186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 20743688 - 20743744
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||| | ||||||||||    
T  20743688 atcaagaggttctcgtagagtactacgaatatttagggtgataatatcttccttaaa 20743744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 25851751 - 25851695
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||| | |||||| || |||||||||||||||||||||| ||||    
T  25851751 atcaagaggttctcgtaaagtactacaaatatttagggtgctaacaccttccctaaa 25851695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 27806593 - 27806485
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| ||||||| || |||||| ||||     
T  27806593 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatctcttcaaaatggggtag 27806494  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  27806493 tttgaactt 27806485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 31967708 - 31967652
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| || ||||||||||| ||||||| ||||    
T  31967708 atcaagaggttctcgtagagtactacgaatatatagggtgctaataccttccctaaa 31967652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 32001148 - 32001204
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| || |||||| |||||||||||||| ||||||| ||||    
T  32001148 atcaagaggttctcgtagagtattacgaatatttagggtgctaataccttccctaaa 32001204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 15448310 - 15448160
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||| |||||||||    |||| |||||| | |||| |||||||||| || ||| |||  ||    
T  15448310 caagaggttcccgtagagtactacggacataaagggtgctaataccttccttttgtgtaactaacccccgaaccctaaatcttttcaatatggggtgttt 15448211  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    |||||||  ||||||  ||||  ||||||| ||||  |||||||||||||||||    
T  15448210 tgaactt--ttttcccctttcccttaaaaa-ttaaatgttcaatcgtgaaataa 15448160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 39639252 - 39639146
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||||||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||    
T  39639252 caagaggttcccgtagagtactacgaacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtt 39639153  T
Q  118 tgaactt 124  Q
    |||||||    
T  39639152 tgaactt 39639146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 23266223 - 23266021
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||    
T  23266223 caagaggttcccgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtt 23266124  T
Q  118 tgaacttcttttt--ccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtc-aaagctaactaaatagctatgacgtccaaaa 214  Q
    ||||||| |||||  ||  ||||||  | ||||||||  ||||| ||||||||| |||||| |||||| ||||||||  |||||||  |||| |||||||    
T  23266123 tgaacttttttttttcccttttctta-ataaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaaagctaatcaaatagccttgacctccaaaa 23266026  T
Q  215 gatga 219  Q
     ||||    
T  23266025 aatga 23266021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 32008105 - 32008161
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| || |||||| |||||||||||| | ||||||| ||||    
T  32008105 atcaagaggttctcgtagagtattacgaatatttagggtgctgataccttccctaaa 32008161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 24483590 - 24483484
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||| ||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | ||||  |||||||||||| ||| |||  ||    
T  24483590 caagagattcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatctttttaatatggggttgtt 24483491  T
Q  118 tgaactt 124  Q
    |||||||    
T  24483490 tgaactt 24483484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 4466489 - 4466662
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| | |||| |||||| ||||||||||||||||    
T  4466489 atcaaaaggttctcgtagaatactacgaacgtttagggtgctaacaccttccataaacgtaactaacccccgaaccctaaatc-ttttaaaatgtggtaa 4466587  T
Q  116 ttt-gaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaagctaacta 194  Q
    ||| |||||  |||||||   |||| ||  |||||||| |||||||||||| |||||||||  |||||||| ||||||||    
T  4466588 tttagaact--tttttcc--cttctctttgaaaattaaaagttcaatcgtg-aataaaatttgtgagtcaatgctaacta 4466662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 3375875 - 3375800
Alignment:
Q  248 aacaaacaaaacttcaatggaaactctc--ggttacttccacccacgttggtatgttatgtcattgttgttatatt 321  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||    
T  3375875 aacaaacgaaacttcaatggaaactctctcggttacttccacccacgttgttatgttatgtcattgttgttatatt 3375800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 3916256 - 3916148
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| |||||||||  | ||||||||||| | |||| ||||||||||||||||| |||||    
T  3916256 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccttttatgtaattaacccccgaaccctaaatctttttaaaatggggtaa 3916157  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  3916156 tttgaactt 3916148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 1628208 - 1628358
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| |||||| || |||||||||||||| ||||||||||||  |||  ||||| | |||| | |||| ||| |||||||||| |    
T  1628208 atcaagaggttctcgtagagtactacaaatatttagggtgctaataccttccttaaatataaccaaccc-cgaacccttaatc-tttaaaaatgtggt-a 1628304  T
Q  116 tttgaacttctttttccaatttctttt-aaaaaattaacagttcaatcgtgaaata 170  Q
    |||||||  ||||||||| |||||||| |||||||||| |||||| ||||||||||    
T  1628305 tttgaac--ctttttccactttcttttgaaaaaattaaaagttcagtcgtgaaata 1628358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 10624301 - 10624446
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||| ||| | |||||||||| | | |||||||||||||||||||||| ||    ||| ||||||   |||| ||||||||| |||||||||||||    
T  10624301 atcaagagattcccatagaatactatggatatttagggtgctaacaccttcccta----taactaacccctgaaccctaaatctttataaaatgtggtaa 10624396  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaa 167  Q
    ||||||||  |||||||| ||||||| ||||||| || |||||| |||||||    
T  10624397 tttgaact--tttttccactttctttcaaaaaataaaaagttcagtcgtgaa 10624446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 22325270 - 22325424
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||  ||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||||| |||| |||||||||| |||||| ||||     
T  22325270 atcaagaggttcctgtagagtactacggacataaagggtgctaataccttccctttatgtaactaaccctcgaaccctaaatcttttcaaaatggggtat 22325369  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  22325370 tttgaacttttttttcc-ctttttcttaaaaaattaaatgttcagtcgtgaaataa 22325424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 30435435 - 30435269
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||||| |||| ||    
T  30435435 caagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtagtt 30435336  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||| |||| ||  ||||||  ||||||||||  ||||| ||||||||| |||||| |||||||||    
T  30435335 tgaactt-ttttccccttttcttaaaaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 30435269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 20038936 - 20038786
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| |||| ||    
T  20038936 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtagtt 20038837  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  20038836 tgaact--tttttccccttt-tcttaaaaaattaaatgttcagtcgtgaaataa 20038786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 12393612 - 12393777
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||| | || |||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| | |||| ||| |||||||||| |    
T  12393612 atcaagaggttctcgtatagtaatacgaatatttagggtgctaataccttccctaaatataaccaacccccgaacccttaatc-tttaaaaatgtggt-a 12393709  T
Q  116 tttgaacttctttttccaatttcttt-taaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    |||||||  ||||||||| |||||||  |||||||||| ||||||  ||||||||||||  |||||||||||    
T  12393710 tttgaac--ctttttccactttctttagaaaaaattaaaagttcagacgtgaaataaaa--aatgagtcaaa 12393777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 18869562 - 18869655
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  18869562 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 18869655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 20073396 - 20073303
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||  |||  ||||| | |||| ||||||| || ||||||    
T  20073396 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccttaaatataaccaacccccgaaccctaaatctcttcaaaatg 20073303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 22597863 - 22597770
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||  |||  ||||| | |||| ||||||| || ||||||    
T  22597863 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccttaaatataaccaacccccgaaccctaaatctcttcaaaatg 22597770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 33253708 - 33253764
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  33253708 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaa 33253764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 18963604 - 18963423
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  ||||||||||||||||||||  | |||| |||| | | |||| |||||||||| |||  | ||||     
T  18963604 atcaagaggttcccgtagagtactacggacataaagggtgctaacaccttccttttatgtaactaactcccgaaccctaaatcttttcaaataggggtag 18963505  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtc-aaagctaactaaatagc 200  Q
    ||||||||  |||||||  ||| | ||||||||||||  ||||| ||||||||| ||||||  ||||| |||||||| ||||||||    
T  18963504 tttgaact--tttttccccttt-tcttaaaaaattaaatgttcagtcgtgaaat-aaattagcgagtcaaaagctaattaaatagc 18963423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 20046743 - 20046593
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| |||| ||    
T  20046743 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtagtt 20046644  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    |||| |  |||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  20046643 tgaaat--tttttccccttt-tcttaaaaaattaaatgttcagtcgtgaaataa 20046593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 2408671 - 2408578
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||| | ||||  |||  ||||| | || |||||||||||| ||||||    
T  2408671 atcaagaggttctcgtagagtactacgaatatttagggtgctaatacctttcctaaatataaccaacccacgaatcttaaatcttttcaaaatg 2408578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 19715047 - 19715199
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| || |||| ||||  |||  ||||| | |||| |||||||| | || ||| |||      
T  19715047 atcaagaggttctcgtagagtactacgaatatttagggtgctaatactttccctaaatataaccaacccccgaaccctaaatcttctcaacatggggtgt 19715146  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||   ||||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  19715147 tttgaa---ctttttcccctttttcttaaaaaattaaatgttcagtcgtgaaataa 19715199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 19721240 - 19721392
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||| | || ||| |||      
T  19721240 atcaaaaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttctcaacatggggtgt 19721339  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||   ||||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  19721340 tttgaa---ctttttcccctttttcttaaaaaattaaatgttcagtcgtgaaataa 19721392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 34270878 - 34270971
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  34270878 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 34270971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 22402961 - 22403017
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  22402961 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 22403017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 26897866 - 26898030
Alignment:
Q  19 aagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaattt 118  Q
    ||||||||| |||||| ||||||| ||||   ||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||| |||| |||    
T  26897866 aagaggttcccgtagagtactacggacataaggggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtagttt 26897965  T
Q  119 gaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  ||||||  ||| | ||||||||||||  ||||| ||||||||| |||||| |||||||||    
T  26897966 gaactt--ttttcccctttttcttaaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 26898030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 28701571 - 28701515
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  28701571 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 28701515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 35025810 - 35025866
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||||||||| ||||    
T  35025810 atcaagaggttctcgtagagtactacgaatatttaggatgctaacaccttccctaaa 35025866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 12666237 - 12666182
Alignment:
Q  17 tcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  12666237 tcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 12666182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 25505196 - 25505042
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| || ||| |||      
T  25505196 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaatatggggtgg 25505097  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||| ||  ||| | ||||||||||||  ||||| |||||||||||    
T  25505096 tttgaactt-ttttccccttttttcttaaaaaattaaatgttcagtcgtgaaataa 25505042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 16323789 - 16323685
Alignment:
Q  20 agaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatttg 119  Q
    ||||||||||||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||||    
T  16323789 agaggttctcgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtttg 16323690  T
Q  120 aactt 124  Q
    |||||    
T  16323689 aactt 16323685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 18386925 - 18386817
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||| ||| ||||  |||||||||| |||||||||  | |||| |||||| | |||| |||||||||| |||||  ||||     
T  18386925 atcaagaggttcccgtagagtacgacggacataaagggtgctaataccttccttttatgtaactaacccccgaaccctaaatcttttcaaaatcgggtag 18386826  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  18386825 tttgaactt 18386817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 18910478 - 18910586
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | ||||  ||||| | |||| |||||||||| |||||| ||||     
T  18910478 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaaccaacccccgaaccctaaatcttttcaaaatggggtag 18910577  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  18910578 tttgaactt 18910586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 22763540 - 22763484
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||| ||||||| ||||    
T  22763540 atcaagaggttctcgtagagtactacgaatatttaggatgctaataccttccctaaa 22763484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 22777792 - 22777736
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  22777792 atcaagagattctcgtagagtactacgaatatttagggtgctaataccttccctaaa 22777736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 24141686 - 24141602
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttt 102  Q
    ||||||||||||||||| ||||||||||||  |||||||||| ||||||| |  | |||| |||||| | |||| ||||||||||    
T  24141686 caagaggttctcgtagagtactacgaacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatctttt 24141602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 24148176 - 24148092
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttt 102  Q
    ||||||||||||||||| ||||||||||||  |||||||||| ||||||| |  | |||| |||||| | |||| ||||||||||    
T  24148176 caagaggttctcgtagagtactacgaacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatctttt 24148092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 27643792 - 27643836
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaac 60  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||    
T  27643792 atcaagaggttctcgtagagtactacgaatatttagggtgctaac 27643836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 22073967 - 22074078
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||    
T  22073967 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtt 22074066  T
Q  118 tgaacttctttt 129  Q
    ||||||| ||||    
T  22074067 tgaacttttttt 22074078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 22231269 - 22231218
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    ||||||||||||||||||||||||||||| ||  ||||||||| ||||||||    
T  22231269 atcaagaggttctcgtagaatactacgaatataaagggtgctatcaccttcc 22231218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 28003246 - 28003428
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||   |||||||||| | | |||||||||||| |||||||||  |||  ||| ||| |||   ||| ||||||  |||||||||||||||    
T  28003246 atcaagaggttccgatagaatactatggatatttagggtgctgacaccttccaaaaatataactaatcctgggaccctaaatc--tttaaaatgtggtaa 28003343  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtc-aaagctaactaaatagctatga 205  Q
    ||||| ||| ||||||      ||||| ||||||||| |||||| ||||| |||||||  | |||||| |||||||| |||||||||||||    
T  28003344 tttgaccttttttttc-----acttttgaaaaattaaaagttcagtcgtg-aataaaaacagtgagtcaaaagctaattaaatagctatga 28003428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 26980571 - 26980388
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | | || |||||| | ||||  ||||||||| |||||  ||||     
T  26980571 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatggaactaacccccgaacccgaaatcttttcaaaatagggtag 26980472  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtc-aaagctaactaaatagc 200  Q
    ||||||||| |||  ||  ||||||  ||||||||||  ||||| || ||||||  ||||| |||||| |||||||| ||||||||    
T  26980471 tttgaacttttttcccctttttcttaaaaaaaattaaatgttcagtcatgaaat--aattagtgagtcaaaagctaattaaatagc 26980388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 27072961 - 27072778
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | | || |||||| | ||||  ||||||||| |||||| ||||     
T  27072961 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatggaactaacccccgaacccgaaatcttttcaaaatggggtag 27072862  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtc-aaagctaactaaatagc 200  Q
    |||||| || |||  ||  ||||||  ||||||||||  ||||| || ||||||  ||||| |||||| |||||||| ||||||||    
T  27072861 tttgaatttttttcccctttttcttaaaaaaaattaaatgttcagtcatgaaat--aattagtgagtcaaaagctaattaaatagc 27072778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 9129978 - 9129814
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| |||  | |||| ||    
T  9129978 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaaataggggtagtt 9129879  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  ||| | ||||||||||||  ||||| ||||||||  |||||| |||||||||    
T  9129878 tgaact--tttttccccttt-tcttaaaaaattaaatgttcagtcgtgaaa-gaaattagtgagtcaaa 9129814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 9143814 - 9143650
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| |||  | |||| ||    
T  9143814 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaaataggggtagtt 9143715  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  ||| | ||||||||||||  ||||| ||||||||  |||||| |||||||||    
T  9143714 tgaact--tttttccccttt-tcttaaaaaattaaatgttcagtcgtgaaa-gaaattagtgagtcaaa 9143650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 21748305 - 21748252
Alignment:
Q  19 aagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    |||||||||||||||| ||||||||| |||||||||||||| || |||| ||||    
T  21748305 aagaggttctcgtagagtactacgaatatttagggtgctaatacattccctaaa 21748252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 26844658 - 26844565
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| || |||||| ||||||||||| || ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  26844658 atcaagaggttctcgtagagtattacgaatatttagggtgccaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 26844565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 614125 - 614017
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||   ||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||| ||||     
T  614125 atcaagaggttcccgtagagtactacggacataaggggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtag 614026  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  614025 tttgaactt 614017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 622045 - 621937
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||   ||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||| ||||     
T  622045 atcaagaggttcccgtagagtactacggacataaggggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtag 621946  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  621945 tttgaactt 621937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 10983708 - 10983555
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| | ||||| |  | |||| |||||| | |||| |||||||||| |||    ||||     
T  10983708 atcaagaggttcccgtagagtactacggacataaagggtgctaaaaacttccctttatgtaactaacccccgaaccctaaatcttttcaaataagggtag 10983609  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  10983608 tttgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaataa 10983555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 25493123 - 25492969
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||  ||||| ||||||| ||||  |||||||||| ||||||| |  |  ||| |||||| | |||| |||||||||| || ||| |||      
T  25493123 atcaagaggttcctgtagagtactacggacataaagggtgctaataccttccctttatttaactaacccccgaaccctaaatcttttcaatatggggtgg 25493024  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||| ||  ||| | ||||||||||||  ||||| |||||||||||    
T  25493023 tttgaactt-ttttccccttttttcttaaaaaattaaatgttcagtcgtgaaataa 25492969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 18229225 - 18229271
Alignment:
Q  19 aagaggttctcgtagaatactacgaacatttagggtgctaacacctt 65  Q
    |||||||||||||||| ||||||||| |||||| ||||||| |||||    
T  18229225 aagaggttctcgtagagtactacgaatatttagagtgctaatacctt 18229271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 8277384 - 8277492
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||  ||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  8277384 atcaagaggttcctgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 8277483  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  8277484 tttgaactt 8277492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 12664037 - 12664093
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| |||||| || ||||||| |||||| | ||||| ||||    
T  12664037 atcaagaggttctcgtagagtactaccaatatttaggatgctaatatcttccctaaa 12664093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 22331023 - 22331107
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctt 100  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| ||||||||    
T  22331023 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatctt 22331107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 8816122 - 8815957
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||||||||||| ||||  ||||||||||  ||||| ||| ||||||||||| |||||||    
T  8816122 atcaagaggttctcgtagagtactacgaatatttagggtgataacaccttccctaaatataattaacccctaaaccctaagtctttttaaaaggtggtaa 8816023  T
Q  116 ttt-gaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagt 182  Q
    ||| |||||  |||  ||  |||||||| ||||||||| |||||||||||||||||||| || |||||    
T  8816022 tttagaact--tttaccccctttcttttgaaaaattaaaagttcaatcgtgaaataaaaatagtgagt 8815957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 9186248 - 9186401
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||  ||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  9186248 atcaagaggttcctgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 9186347  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  9186348 tttgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaataa 9186401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 19736682 - 19736574
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||| | ||||  ||||||||| ||||||  |||     
T  19736682 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaacccccgaacccaaaatcttttcaaaatggagtag 19736583  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  19736582 tttgaactt 19736574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 47877749 - 47877904
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctc-aaaccttaaatctttttaaaatgtggta 114  Q
    ||||||||||||||||||| ||||||||| | |||||||||||| ||||||| ||||  |||  ||||| | || ||||||||| ||| ||||||||||     
T  47877749 atcaagaggttctcgtagagtactacgaatagttagggtgctaataccttccctaaatataaccaacccccgaacccttaaatc-tttaaaaatgtggt- 47877846  T
Q  115 atttgaacttctttttccaatttctttt-aaaaaattaacagttcaatcgtgaaataaaa 173  Q
    ||||||||  | ||||||| |||||||| |||||||||| |||||| ||||||| |||||    
T  47877847 atttgaac--cattttccactttcttttgaaaaaattaaaagttcagtcgtgaactaaaa 47877904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 44623895 - 44624050
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  44623895 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 44623994  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| | || ||| ||||||   |||||||||  ||||| |||||||||||    
T  44623995 tttgaacttttcttcccattttcttaataaaaattaaatgttcagtcgtgaaataa 44624050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 745985 - 745892
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||||||||||| |||||||||    
T  745985 atcaagaggttcttgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccttaaatctctttaaaatg 745892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 3834743 - 3834578
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    ||||||||||||||||| ||||||| ||||  ||||||||||||||||||||  | |||| |||||| | |||| |||||||||| |||  | |||  ||    
T  3834743 caagaggttctcgtagagtactacggacataaagggtgctaacaccttccttttatgtaactaacccccgaaccctaaatcttttcaaataggggtgttt 3834644  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  ||| |  |||||||||||  ||||| ||||||||| |||||| |||||||||    
T  3834643 tgaact--tttttcccctttttcataaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 3834578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 55790965 - 55791058
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  55790965 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 55791058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 20555303 - 20555359
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  20555303 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaa 20555359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 22140073 - 22140017
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  22140073 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaa 22140017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 22151987 - 22151931
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  22151987 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaa 22151931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 25986544 - 25986697
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  25986544 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 25986643  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  ||||| || |||||||||  |||||||||||||||||    
T  25986644 tttgaact--tttttcccctttctctttaaaaattaaatgttcaatcgtgaaataa 25986697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 3441438 - 3441606
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||   ||||| ||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||| ||||     
T  3441438 atcaagaggttcccgtagagtactacggacataaggggtgttaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtag 3441537  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||| |||||||  ||| | ||||||||||||  ||||| ||||||||| |||||| |||||||||    
T  3441538 tttgaactt-tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 3441606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 739802 - 739895
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| |||||||||    
T  739802 atcaagaggttcttgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctctttaaaatg 739895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 18217527 - 18217681
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| |||||||||  | |||| |||||| | |||| ||||| |||| |||  | ||||     
T  18217527 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccttttatgtaactaacccccgaaccctaaattttttcaaataggggtag 18217626  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaa 172  Q
    ||||||||  |||||||  ||| | ||||||||||||  ||||| ||||||||||||    
T  18217627 tttgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaataaa 18217681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 3381125 - 3381069
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  3381125 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 3381069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 14899647 - 14899763
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||  ||||  |||||| ||| ||||||| |  | |||||||||||   ||||||||||||||| |||||| ||||     
T  14899647 atcaagaggttcccgtagagtactacagacataaagggtgataataccttccctttatgtaattaacccctgaaccttaaatcttttcaaaatggggtag 14899746  T
Q  116 tttgaacttctttttcc 132  Q
    ||||||||| |||||||    
T  14899747 tttgaacttttttttcc 14899763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 15080714 - 15080658
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  15080714 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 15080658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 20561947 - 20562003
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||    
T  20561947 atcaagaggttctcgtagagtactacgaatatttaaggtgctaacaccttccctaaa 20562003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 49891822 - 49891873
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  49891822 atcaagaggttctcgtagagtactacgaatatttagggtgctaaaaccttcc 49891873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 5063591 - 5063746
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||| |||||||||| |||| |||| |||||||||||||| || |||||||||  |||| ||||| | |||| | |||  ||| |||||||||| |    
T  5063591 atcaagagattctcgtagagtactgcgaatatttagggtgctaatacattccttaaatataatcaacccccgaacccttaat-atttaaaaatgtggt-a 5063688  T
Q  116 tttgaacttctttttccaatttctttt-aaaaaattaacagttcaatcgtgaaataaaa 173  Q
    |||||||   ||||| || |||||||| |||||||||| |||||| |||| ||||||||    
T  5063689 tttgaac-cattttttcactttcttttgaaaaaattaaaagttcagtcgtaaaataaaa 5063746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 55800485 - 55800535
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttc 66  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  55800485 atcaagaggttctcatagagtactacgaatatttagggtgctaacaccttc 55800535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 736468 - 736375
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    |||||||||||||| |||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||  | |||| ||||||| |||||||||    
T  736468 atcaagaggttctcatagagtactacgaatatttagggtgctaataccttccctaaatataaccaacctccgaaccctaaatctctttaaaatg 736375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 3396261 - 3396168
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||| | ||||||| |||||| ||||||| ||||  |||  ||||| | |||||| |||||||| ||||||    
T  3396261 atcaagaggttctcgtagagtactacgcatatttaggttgctaataccttccctaaatataaccaacccccgaaccttgaatcttttcaaaatg 3396168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 15878048 - 15877934
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| |||| | ||||||||| ||||||| |  | |||| |||  ||| |||| |||||||||| |||||| ||||     
T  15878048 atcaagaggttcccgtagagtactacggacatattgggtgctaataccttccctttatgtaactaa--ctcgaaccctaaatcttttcaaaatggggtag 15877951  T
Q  116 tttgaacttctttttcc 132  Q
    ||||||||| |||||||    
T  15877950 tttgaacttttttttcc 15877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 3387867 - 3387811
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| |||||| || |||||||||||||| ||||||| ||||    
T  3387867 atcaagaggttctcgtagagtactacaaatatttagggtgctaataccttccctaaa 3387811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 39743598 - 39743542
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||| ||||||| ||||    
T  39743598 atcaagaggttctcgtagagtactatgaatatttagggtgctaataccttccctaaa 39743542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 3358620 - 3358671
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    |||| |||||||||||||| ||||||||| |||||||||||||| |||||||    
T  3358620 atcaggaggttctcgtagagtactacgaatatttagggtgctaataccttcc 3358671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 3368286 - 3368337
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    |||| |||||||||||||| ||||||||| |||||||||||||| |||||||    
T  3368286 atcaggaggttctcgtagagtactacgaatatttagggtgctaataccttcc 3368337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 10219621 - 10219528
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    |||||||||| ||| |||| ||||||||| |||||||||||||| ||||||| ||||  |||  |||||   |||| |||||||||| ||||||    
T  10219621 atcaagaggtactcatagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccatgaaccctaaatcttttcaaaatg 10219528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 14926937 - 14927050
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||   ||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||| ||||     
T  14926937 atcaagaggttcccgtagagtactacggacataaggggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtag 14927036  T
Q  116 tttgaacttctttt 129  Q
    ||||||||| ||||    
T  14927037 tttgaacttttttt 14927050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 20840877 - 20840705
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||   ||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||| ||||     
T  20840877 atcaagaggttcccgtagagtactacggacataaggggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtag 20840778  T
Q  116 tttgaacttctttttccaatttctt----ttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||| |||| ||  ||| ||    ||||||||||||  ||||| ||||||||| |||||| |||||||||    
T  20840777 tttgaactt-ttttccctttttttttttcttaaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 20840705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 55791959 - 55791781
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | ||||  ||||| | |||| |||||||||| || ||| |||  ||    
T  55791959 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaaccaacccccgaaccctaaatcttttcaatatggggtgttt 55791860  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtc-aaagctaactaaatagc 200  Q
    ||||   ||||||||  ||| || | |||||||||  ||||| ||||||||| |||||| |||||| |||||||| ||||||||    
T  55791859 tgaa---ctttttccccttt-ttcttaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaaagctaattaaatagc 55791781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 18093 - 18201
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| |||   |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  18093 atcaagaggttcccgtagagtactacggacaaaaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 18192  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  18193 tttgaactt 18201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 9191665 - 9191773
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||   ||| | ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  9191665 atcaagaggttactgtatagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 9191764  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  9191765 tttgaactt 9191773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 16369254 - 16369417
Alignment:
Q  19 aagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaattt 118  Q
    ||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||||| |||  |||||||||| ||| || |||| |||    
T  16369254 aagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaaccctcgaactctaaatcttttcaaa-tggggtagttt 16369352  T
Q  119 gaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  ||||||  |||  || | ||||||||  ||||| ||||||||| |||||| |||||||||    
T  16369353 gaactt--ttttccccttttcttaataaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 16369417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 11599756 - 11599717
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtg 55  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  11599756 atcaagaggttctcgtagagtactacgaatatttagggtg 11599717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 15887635 - 15887549
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttt 102  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| ||||||||||    
T  15887635 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatctttt 15887549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 39045717 - 39045778
Alignment:
Q  23 ggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccc 84  Q
    ||||||||||| |||||||  || ||||||||||||||||||||| |  |||||| ||||||    
T  39045717 ggttctcgtaggatactacagacgtttagggtgctaacaccttccctttacgtaactaaccc 39045778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 40815639 - 40815546
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||| | ||||||  |||||| ||||||| ||||  |||  ||||| | |||| || ||||||| ||||||    
T  40815639 atcaagaggttctcgtagagtactacgtatatttagtttgctaataccttccctaaatataaccaacccccgaaccctatatcttttcaaaatg 40815546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 7946067 - 7946221
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||  ||||||||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| | |||| ||||     
T  7946067 atcaagaggttcctgtagaatactacggacataaagggtgctaataccttccctttatgtaactaaccc-cgaacccaaaatcttttcagaatggggtag 7946165  T
Q  116 tttg-aacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    |||| ||||| |||||||  |||| || | ||||||||  ||||| |||||||||||    
T  7946166 tttgtaacttttttttcccttttc-ttaataaaattaaatgttcagtcgtgaaataa 7946221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 23994811 - 23994658
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  | ||||| || ||||| |||  | ||||  ||||| | |||| |||||||| | |||||| |||| ||    
T  23994811 caagaggttcccgtagactactacggacataaaaggtgccaatacctttcttttatgtaaccaacccccgaaccctaaatcttgtcaaaatggggtagtt 23994712  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaa 173  Q
    ||||||| |||  ||| |||||   ||||||||||  ||||| |||||||||||||    
T  23994711 tgaacttttttccccattttcta--aaaaaattaaatgttcagtcgtgaaataaaa 23994658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 24792 - 24610
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| | |||||||||| | | ||||| |||||||||||||||| ||||  ||| |||||| | |||| |||||||||| ||||||||||||    
T  24792 atcaagaggttcccatagaatactatggatatttacggtgctaacaccttccctaaatataactaacccccgaaccctaaatctttt-aaaatgtggtaa 24694  T
Q  116 ttt-gaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaagctaactaaatagct 201  Q
    | | ||| || |||| ||  |||||||| ||||||||| |||||| |||||||||||||||| |||||||| |||||| ||||||||    
T  24693 tatagaaatt-ttttacc--tttcttttgaaaaattaaaagttcagtcgtgaaataaaattagtgagtcaatgctaaccaaatagct 24610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 9e-24; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 30250603 - 30250783
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  |||||   |||| | |||| ||| |||||||||| |    
T  30250603 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaacccctgaacccttaatc-tttaaaaatgtggt-a 30250700  T
Q  116 tttgaacttctttttccaatttctttt-aaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaagctaactaaatagct 201  Q
    ||| |||  ||||||||| |||||||| |||||||||| |||||| ||| |||||||||  ||||||||||| ||||  ||||||||    
T  30250701 tttaaac--ctttttccactttcttttgaaaaaattaaaagttcagtcgcgaaataaaa--aatgagtcaaaactaatcaaatagct 30250783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 37578031 - 37578124
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||| |||||| ||||||| || ||||||    
T  37578031 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaacccccaaaccctaaatctcttcaaaatg 37578124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 23376983 - 23376830
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||| | ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  23376983 atcaagaggttcccgtatagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 23376884  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  23376883 tttgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaataa 23376830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 10059197 - 10059379
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||| ||| ||||  ||||  |||| | |||| | |||| ||| |||||||||| |    
T  10059197 atcaagaggttctcgtagagtactacgaatatttagggtgctaatacc-tccctaaatataatcgacccccgaacccttaatc-tttaaaaatgtggt-a 10059293  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaagctaactaaatagctatga 205  Q
    ||||||   ||||||||| ||| ||| |||||||||| | ||||||||| ||||||||  | |||||||||| |||  ||||||||||||    
T  10059294 tttgaa--gctttttccattttttttgaaaaaattaaaaattcaatcgttaaataaaa--agtgagtcaaagttaatcaaatagctatga 10059379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 21746597 - 21746504
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  21746597 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 21746504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 24060560 - 24060467
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  24060560 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 24060467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 37587141 - 37587234
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  37587141 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 37587234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 38226636 - 38226481
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| | |||| ||| ||||| |||| |    
T  38226636 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaacccttaatc-tttaaaaatctggt-a 38226539  T
Q  116 tttgaacttctttttccaatttctttt--aaaaaattaacagttcaatcgtgaaataaaa 173  Q
    |||||||   |||||||| ||||||||  |||||||||| ||||||  ||||||||||||    
T  38226538 tttgaac--atttttccactttcttttgaaaaaaattaaaagttcagccgtgaaataaaa 38226481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 20638531 - 20638475
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  20638531 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaa 20638475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 23575500 - 23575334
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| |||| ||    
T  23575500 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtagtt 23575401  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||| |||||||  |||   | | ||||||||  ||||| ||||||||| |||||| |||||||||    
T  23575400 tgaactt-tttttccccttttcataataaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 23575334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 21826200 - 21826094
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| |||| ||    
T  21826200 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtagtt 21826101  T
Q  118 tgaactt 124  Q
    |||||||    
T  21826100 tgaactt 21826094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 34461455 - 34461548
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  34461455 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 34461548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 34475712 - 34475805
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  34475712 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 34475805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 36433920 - 36434013
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  36433920 atcaagaggttctcgtagagtactatgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 36434013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 29894496 - 29894552
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  29894496 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 29894552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 29903218 - 29903274
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  29903218 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 29903274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 36449634 - 36449690
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  36449634 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 36449690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 36456022 - 36456078
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  36456022 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 36456078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 171
Target Start/End: Original strand, 1799536 - 1799686
Alignment:
Q  20 agaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatttg 119  Q
    ||||||||||||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||||    
T  1799536 agaggttctcgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccacgaaccctaaatcttttcaaataggggtagtttg 1799635  T
Q  120 aacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||| |||| ||  ||||||   |||||||||  ||||| |||||||||||    
T  1799636 aactt-ttttccccttttcttaataaaaattaaatgttcagtcgtgaaataa 1799686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 171
Target Start/End: Original strand, 1807269 - 1807419
Alignment:
Q  20 agaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatttg 119  Q
    ||||||||||||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||||    
T  1807269 agaggttctcgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtttg 1807368  T
Q  120 aacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||| |||| ||  ||||||   |||||||||  ||||| |||||||||||    
T  1807369 aactt-ttttccccttttcttaataaaaattaaatgttcagtcgtgaaataa 1807419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 7253389 - 7253222
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||   ||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  7253389 atcaagaggttcccgtagagtactacggacataaggggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 7253290  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||  |||||||  ||| | ||||||||||||  ||||| ||||||||| |||||| |||||||||    
T  7253289 tttgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 7253222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 7260832 - 7260665
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||   ||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  7260832 atcaagaggttcccgtagagtactacggacataaggggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 7260733  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||  |||||||  ||| | ||||||||||||  ||||| ||||||||| |||||| |||||||||    
T  7260732 tttgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 7260665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 15955698 - 15955544
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | | || |||||||| ||||  ||||||||| |||||| ||||     
T  15955698 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatggaactaaccctcgaacccaaaatcttttcaaaatggggtag 15955599  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||| ||  |||  || ||||||||||  ||||| |||||||||||    
T  15955598 tttgaactt-ttttcccccttttcttaaaaaaattaaatgttcagtcgtgaaataa 15955544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 17963738 - 17963854
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  17963738 atcaagaggttcccgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 17963837  T
Q  116 tttgaacttctttttcc 132  Q
    ||||||||| |||||||    
T  17963838 tttgaacttttttttcc 17963854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 21829360 - 21829192
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||   ||||||||| ||||||| |  | |||| |||||| | |||| ||||||| || |||||| ||||     
T  21829360 atcaagaggttcccgtagagtactacggacataaggggtgctaataccttccctttatgtaactaacccccgaaccctaaatctcttcaaaatggggtag 21829261  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||| |||||||  |||   | | ||||||||  ||||| ||||||||| |||||| |||||||||    
T  21829260 tttgaactt-tttttccccttttcataataaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 21829192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 22705915 - 22705965
Alignment:
Q  17 tcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    |||||||||||||||||| ||||||||||||  |||||||||| |||||||    
T  22705915 tcaagaggttctcgtagagtactacgaacataaagggtgctaataccttcc 22705965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 37049753 - 37049803
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttc 66  Q
    |||||||||||||| |||| ||||||||| |||||||||||||| ||||||    
T  37049753 atcaagaggttctcatagagtactacgaatatttagggtgctaataccttc 37049803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 40016325 - 40016410
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatcttt 101  Q
    |||||||||| |||||| | ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||    
T  40016325 atcaagaggtcctcgtatattactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttt 40016410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 22957846 - 22957693
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||  | ||||     
T  22957846 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaataggggtag 22957747  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
     |||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  22957746 cttgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaataa 22957693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 25527578 - 25527731
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| ||  || |||      
T  25527578 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaatgtggggtgg 25527677  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  ||| | ||||||||| ||  ||||| |||||||||||    
T  25527678 tttgaact--tttttcccctttttcttaaaaaataaaatgttcagtcgtgaaataa 25527731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 17949849 - 17949935
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttt 102  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| ||||||||||    
T  17949849 atcaagaggttcccgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatctttt 17949935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 21727208 - 21727057
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||  |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| || ||| |||  ||    
T  21727208 caagaggtttccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaatatggggttgtt 21727109  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||  |||||||  ||| | | ||||||||||  ||||| |||||||||||    
T  21727108 tgaact--tttttcccctttttataaaaaaattaaatgttcagtcgtgaaataa 21727057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 40183177 - 40183283
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||||||||| |||||||| ||||  |  ||||||| || |||| |  | |||| |||||| | |||| ||||||||||||| ||| |||| ||    
T  40183177 caagaggttctcgtaggatactacggacataaaatgtgctaatactttccctttatgtaactaacccccgaaccctaaatctttttaatatggggtagtt 40183276  T
Q  118 tgaactt 124  Q
    |||||||    
T  40183277 tgaactt 40183283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 25448623 - 25448510
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||   || |||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||| ||||     
T  25448623 atcaagaggttcccgtagagtactacggacataagggctgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtag 25448524  T
Q  116 tttgaacttctttt 129  Q
    ||||||||| ||||    
T  25448523 tttgaacttttttt 25448510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 25827371 - 25827523
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    ||||||||||   |||| |||||| |||||  |||||||||| ||||||| |  | |||| |||||||| |||| |||||||||| |||  | |||| ||    
T  25827371 caagaggttcctatagagtactacaaacataaagggtgctaataccttccctttatgtaactaaccctcgaaccctaaatcttttcaaataggggtagtt 25827470  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||| |||| ||  |||||   ||||||||||  |||| ||||||||||||    
T  25827471 tgaactt-ttttccccttttctaaaaaaaaattaaatgttcgatcgtgaaataa 25827523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 20084743 - 20084635
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||  | ||||     
T  20084743 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaataggggtag 20084644  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  20084643 tttgaactt 20084635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 20098345 - 20098237
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||  | ||||     
T  20098345 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaataggggtag 20098246  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  20098245 tttgaactt 20098237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 23689666 - 23689513
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||  ||||  | |||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  23689666 atcaagaggttcccgtagagtactacagacataaaaggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 23689567  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  ||| | ||||||||||||  ||||| |||| ||||||    
T  23689566 tttgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtaaaataa 23689513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 25534262 - 25534415
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||  ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| ||  || |||      
T  25534262 atcaagaggttcacgtagagtactacagacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaatgtggggtgg 25534361  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  ||| | ||||||||| ||  ||||| |||||||||||    
T  25534362 tttgaact--tttttcccctttttcttaaaaaataaaatgttcagtcgtgaaataa 25534415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 25675847 - 25675799
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttc 66  Q
    |||||||||| |||||| ||||||||||||  |||||||||| ||||||    
T  25675847 caagaggttcccgtagagtactacgaacataaagggtgctaataccttc 25675799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 26546591 - 26546483
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  ||| |||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  26546591 atcaagaggttcccgtagagtactacggacataaaggatgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 26546492  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  26546491 tttgaactt 26546483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 26870429 - 26870513
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttt 102  Q
    |||||||||| |||||| ||||||| ||||   ||||||||||||||||| |  | |||| |||||| | |||| ||||||||||    
T  26870429 caagaggttcccgtagagtactacggacatgacgggtgctaacaccttccctttatgtaactaacccccgaaccctaaatctttt 26870513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 12997870 - 12997721
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||||||||| ||||  |||| ||||| | |||| | |||| ||| |||||||||| |    
T  12997870 atcaagaggttctcgtagagtactacgaatatttaggatgctaacaccttccctaaatataatcaacccccgaaccctcaatc-tttaaaaatgtggt-a 12997773  T
Q  116 tttgaacttctttttccaatttctttt--aaaaaattaacagttcaatcgtgaa 167  Q
    |||||||  ||||||||| ||||||||  |||||||||| |||||| |||||||    
T  12997772 tttgaac--ctttttccactttcttttgaaaaaaattaaaagttcagtcgtgaa 12997721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 2227067 - 2227247
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||||||  |||||||||| ||||||  |  | ||||  ||||| | |||| |||||| |||||||| ||||| |    
T  2227067 atcaagaggttctcgtagagtactacgaacataaagggtgctaataccttctctttatgtaaccaacccccgaaccctaaatc-ttttaaaacgtggt-a 2227164  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaagctaactaaatagct 201  Q
    ||||||||  |||||||  ||| |||||||||||||| |||||| |||||||||||||||| |||||| | |||||  ||||||||    
T  2227165 tttgaact--tttttccccttt-ttttaaaaaattaaaagttcagtcgtgaaataaaattagtgagtctatgctaataaaatagct 2227247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 14879916 - 14879804
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||  ||| |||||| | ||||  |||||||||   |||| ||||     
T  14879916 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccttaaatataactaacccccgaacccaaaatctttt--caatggggtag 14879819  T
Q  116 tttgaacttcttttt 130  Q
    ||||||||| |||||    
T  14879818 tttgaactttttttt 14879804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 17216865 - 17216732
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||||||||| | ||  |||| ||||| | |||| | ||| |||| |||||||||| |    
T  17216865 atcaaaaggttctcgtagagtactacgaatatttagggtgctaacaccttccctgaatataatcaacccccgaacccttaat-ttttaaaaatgtggt-a 17216768  T
Q  116 tttgaacttctttttccaatttctttt-aaaaaattaa 152  Q
    |||||||  ||||||||| |||||||| ||||||||||    
T  17216767 tttgaac--ctttttccactttcttttgaaaaaattaa 17216732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 2253386 - 2253234
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | ||||  |||||||||||||||| |||| ||    
T  2253386 caagaggttcccgtagattactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatctttttaaaatggggtagtt 2253287  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||| |||| ||  ||||||   |||||||||  ||||| |||||||||||    
T  2253286 tgaactt-ttttccccttttcttaataaaaattaaatgttcagtcgtgaaataa 2253234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 3676906 - 3676999
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  3676906 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 3676999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 3686041 - 3686134
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  3686041 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 3686134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 6956766 - 6956673
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  6956766 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 6956673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 16469377 - 16469284
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  16469377 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 16469284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 19835315 - 19835494
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||| | |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| |||||| |||| ||    
T  19835315 caagaggtacccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtagtt 19835414  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtc-aaagctaactaaatagc 200  Q
    ||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||  ||||| |||||| |||||||| ||||||||    
T  19835415 tgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaat--aattagtgagtcaaaagctaattaaatagc 19835494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 20435909 - 20436002
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  20435909 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 20436002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 20449835 - 20449928
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  20449835 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 20449928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 41433075 - 41433168
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  41433075 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 41433168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 41441572 - 41441665
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  41441572 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 41441665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 8607557 - 8607665
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  8607557 atcaagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 8607656  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  8607657 tttgaactt 8607665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 12702918 - 12703010
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaat 108  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| |||||    
T  12702918 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccataaatataaccaacccccgaaccctaaatcttttcaaaat 12703010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 14886504 - 14886448
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  14886504 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaa 14886448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 21637258 - 21637202
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  21637258 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaa 21637202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 27874135 - 27874191
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  27874135 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaa 27874191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 46391637 - 46391470
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    ||||||||||  ||||| ||||||| ||||   ||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||| |||| ||    
T  46391637 caagaggttcctgtagagtactacggacataaggggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtagtt 46391538  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||| |||||||  ||| | ||||||||||||  ||||| ||||||||| |||||| |||||||||    
T  46391537 tgaacttttttttcccctttttcttaaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 46391470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 46399385 - 46399218
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    ||||||||||  ||||| ||||||| ||||   ||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||| |||| ||    
T  46399385 caagaggttcctgtagagtactacggacataaggggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtagtt 46399286  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||| |||||||  ||| | ||||||||||||  ||||| ||||||||| |||||| |||||||||    
T  46399285 tgaacttttttttcccctttttcttaaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 46399218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 48059398 - 48059242
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||  ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| || ||| |||      
T  48059398 atcaagaggttcccgtagagtactacagacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaatatggggtgg 48059299  T
Q  116 tttgaacttctttttccaatttctt-ttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||||||  ||| || ||||||||||||  ||||| |||||||||||    
T  48059298 tttgaacttttttttccccttttttcttaaaaaattaaatgttcagtcgtgaaataa 48059242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 262723 - 262876
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||| | | || ||| |||      
T  262723 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatc-tctcaatatggggtgt 262821  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| ||||||| |||| | ||||||||| ||  ||||| |||||||||||    
T  262822 tttgaactt-tttttcccatttttcttaaaaaataaaatgttcagtcgtgaaataa 262876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 9524023 - 9523869
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| |||||| |||||||||| || ||| |||      
T  9524023 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccaaaccctaaatcttttcaatatggggtgg 9523924  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||| ||  ||| | ||||||||||||  ||||| |||||||||||    
T  9523923 tttgaactt-ttttccccttttttcttaaaaaattaaatgttcagtcgtgaaataa 9523869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 6971046 - 6970953
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| |||||| || |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  6971046 atcaagaggttctcgtagagtactacaaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 6970953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 14738107 - 14738014
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  14738107 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 14738014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 14891769 - 14891655
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||| |||||||| |||  ||| |||||| | ||||  |||||||||   |||||||||     
T  14891769 atcaagaggttcttgtagagtactacgaatatttagggtgctaataccttcctcaaatataactaacccccgaacccaaaatctttt--caatgtggtag 14891672  T
Q  116 tttgaacttctttttcc 132  Q
    ||||||| | |||||||    
T  14891671 tttgaacctttttttcc 14891655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 30013483 - 30013576
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||  |||  ||||| | |||| ||||||| || ||||||    
T  30013483 atcaagaggttctcgtagagtactacgaatgtttagggtgctaataccttccttaaatataaccaacccccgaaccctaaatctcttcaaaatg 30013576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 30022909 - 30023002
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||  |||  ||||| | |||| ||||||| || ||||||    
T  30022909 atcaagaggttctcgtagagtactacgaatgtttagggtgctaataccttccttaaatataaccaacccccgaaccctaaatctcttcaaaatg 30023002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 69540 - 69596
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  69540 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 69596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 75633 - 75689
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  75633 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 75689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 8614020 - 8614128
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||| |||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  8614020 atcaagaagttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 8614119  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  8614120 tttgaactt 8614128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 13104318 - 13104262
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  13104318 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 13104262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 13110474 - 13110418
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  13110474 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 13110418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 9553738 - 9553584
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| || ||| |||      
T  9553738 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaatatggggtgg 9553639  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||| ||  ||| | ||||||||||||  ||||| |||||||||||    
T  9553638 tttgaactt-ttttccccttttttcttaaaaaattaaatgttcagtcgtgaaataa 9553584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 46373034 - 46373188
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||  ||||| ||||||| ||||  ||||||||||||||||||||  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  46373034 atcaagaggttcctgtagagtactacggacataaagggtgctaacaccttccttttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 46373133  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||||||  |||  || | ||||||||  ||||| |||||||||||    
T  46373134 tttgaactt-tttttccccttttcttaataaaattaaatgttcagtcgtgaaataa 46373188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 46387161 - 46387315
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||  ||||| ||||||| ||||  ||||||||||||||||||||  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  46387161 atcaagaggttcctgtagagtactacggacataaagggtgctaacaccttccttttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 46387260  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||||||  |||  || | ||||||||  ||||| |||||||||||    
T  46387261 tttgaactt-tttttccccttttcttaataaaattaaatgttcagtcgtgaaataa 46387315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 47730520 - 47730669
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||| ||| ||||||| |||||||||||||| ||||  |||  || || | |||| | |||| ||| ||||||| || |    
T  47730520 atcaagaggttctcgtagagtactatgaatatttaggatgctaacaccttccctaaatataaccaatccccgaaccctcaatc-tttaaaaatgt-gtta 47730617  T
Q  116 tttgaacttctttttccaatttctttt--aaaaaattaacagttcaatcgtgaa 167  Q
    |||||||  ||||||||| ||||||||  |||||||||| |||||| |||||||    
T  47730618 tttgaac--ctttttccactttcttttgaaaaaaattaaaagttcagtcgtgaa 47730669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 18709662 - 18709768
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||||||||  |||||||||| ||||||| |  | |||| |||||  | |||| |||||||||| |||||| |||| ||    
T  18709662 caagaggttcccgtagagtactacgaacataaagggtgctaataccttccctttatgtaactaacctccgaaccctaaatcttttcaaaatggggtagtt 18709761  T
Q  118 tgaactt 124  Q
    |||||||    
T  18709762 tgaactt 18709768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 49965302 - 49965149
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||| | ||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  49965302 atcaagaggttcccgtagagtactacggacataaagggtgctgataccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 49965203  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaa 172  Q
    ||||||||| |||| ||  ||||||   |||||||||  |||||  |||||||||||    
T  49965202 tttgaactttttttccctttttctt---aaaaattaaatgttcagccgtgaaataaa 49965149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 20602231 - 20602078
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| |||| || ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||    
T  20602231 caagaggttcccgtagagtactgcggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtt 20602132  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||| |||||||  |||  || | ||||||||  ||||| |||||||||||    
T  20602131 tgaacttttttttccccttttcttaataaaattaaatgttcagtcgtgaaataa 20602078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 44362284 - 44362200
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatcttt 101  Q
    |||||||| |||||||||| ||||||||| ||||||| |||||||||||||| ||||  ||| |||||| | |||| |||||||||    
T  44362284 atcaagagattctcgtagagtactacgaatatttaggatgctaacaccttccctaaatataactaaccc-cgaaccataaatcttt 44362200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 3412637 - 3412693
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  3412637 atcaagagattctcgtagagtactacgaatatttagggtgctaataccttccctaaa 3412693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 12471065 - 12470957
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||| ||||  |||||||||| ||||| | |  | |||| |||||| | |||| |||||||||| || ||| ||||     
T  12471065 atcaagaggttctcgtagagtactacggacataaagggtgctaatacctttcctttatgtaactaacccccgaaccctaaatcttttcaatatggggtag 12470966  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  12470965 tttgaactt 12470957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 29208 - 29098
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||  ||||  |||||||||| |||||||||  | ||||||||||| | |||| |||||| ||| |||||| |||| ||    
T  29208 caagaggttcccgtagagtactacagacataaagggtgctaataccttccttttatgtaattaacccccgaaccctaaatc-tttcaaaatggggtagtt 29110  T
Q  118 tgaacttctttt 129  Q
    ||||||| ||||    
T  29109 tgaacttttttt 29098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 11182821 - 11182936
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||| ||||     
T  11182821 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtag 11182920  T
Q  116 tttgaacttctttttc 131  Q
    |||||| || ||||||    
T  11182921 tttgaatttttttttc 11182936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 15985466 - 15985423
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaa 59  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  15985466 atcaagaggttctcgtagaatactacgaatatttagggtcctaa 15985423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 26385433 - 26385390
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaa 59  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||    
T  26385433 atcaagaggttctcgtagactactacgaatatttagggtgctaa 26385390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 37469313 - 37469464
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaaca-ccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggta 114  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||| | |||||| ||||  |||| ||||| | |||| | |||| ||| ||||||||||     
T  37469313 atcaagaggttctcgcagagtactacgaatatttagggtgctaatacccttccctaaatataatcaaccc-cgaacccttaatc-tttaaaaatgtggt- 37469409  T
Q  115 atttgaacttctttttccaatttctttt-aaaaaattaacagttcaatcgtgaaataa 171  Q
    |||||||   | ||||||| |||||||| ||||||||||  ||||| |||||||||||    
T  37469410 atttgaa---cattttccactttcttttgaaaaaattaaatgttcagtcgtgaaataa 37469464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 5944218 - 5944112
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||||||    
T  5944218 caagaggttcccgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtaatt 5944119  T
Q  118 tgaactt 124  Q
    |||||||    
T  5944118 tgaactt 5944112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 5958330 - 5958224
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||||||    
T  5958330 caagaggttcccgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtaatt 5958231  T
Q  118 tgaactt 124  Q
    |||||||    
T  5958230 tgaactt 5958224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 15925542 - 15925648
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    ||||||||||||||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| || ||| |||  ||    
T  15925542 caagaggttctcgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaatatggggtgttt 15925641  T
Q  118 tgaactt 124  Q
    |||||||    
T  15925642 tgaactt 15925648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 8625725 - 8625774
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    ||||||||||||||||| ||||||||||||  |||||||||| |||||||    
T  8625725 caagaggttctcgtagagtactacgaacataaagggtgctaataccttcc 8625774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 16016176 - 16016083
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| |||||| |  |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  16016176 atcaagaggttctcgtagagtactactattatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 16016083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 8617853 - 8617937
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttt 102  Q
    ||||||||||| ||||| ||||||||||||  |||||||||| ||||||| |  | |||| |||||| | |||| ||||||||||    
T  8617853 caagaggttctagtagagtactacgaacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatctttt 8617937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 12559235 - 12559343
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| | ||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||| ||||     
T  12559235 atcaagaggttcccgtagagtactacggaaataaagggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtag 12559334  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  12559335 tttgaactt 12559343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 4312277 - 4312171
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    ||||||||||  ||||| ||||||| ||||  |||||||||||||||||| |  | ||||  ||||| | |||| ||||||||||||||  | |||| ||    
T  4312277 caagaggttcctgtagagtactacggacataaagggtgctaacaccttccctttatgtaaccaacccccgaaccctaaatctttttaaataggggtagtt 4312178  T
Q  118 tgaactt 124  Q
    |||||||    
T  4312177 tgaactt 4312171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 14322736 - 14322822
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttt 102  Q
    |||||||||||| |||||| ||||||  ||||  |||||||||| ||||||| |  | |||| |||||| |||||| ||||||||||    
T  14322736 atcaagaggttcccgtagagtactacagacataaagggtgctaaaaccttccctttatgtaactaacccccaaaccctaaatctttt 14322822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 15621837 - 15621943
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| |||| || ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| || ||| |||  ||    
T  15621837 caagaggttcccgtagagtacttcggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaatatggggtgttt 15621936  T
Q  118 tgaactt 124  Q
    |||||||    
T  15621937 tgaactt 15621943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 18694287 - 18694393
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| || ||| |||  ||    
T  18694287 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaatatggggttgtt 18694386  T
Q  118 tgaactt 124  Q
    |||||||    
T  18694387 tgaactt 18694393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 23280919 - 23280870
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    ||||||||||  ||||| ||||||| ||||| ||||||||||||||||||    
T  23280919 caagaggttcctgtagagtactacggacattaagggtgctaacaccttcc 23280870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 23286818 - 23286769
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    ||||||||||  ||||| ||||||| ||||| ||||||||||||||||||    
T  23286818 caagaggttcctgtagagtactacggacattaagggtgctaacaccttcc 23286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 15577413 - 15577321
Alignment:
Q  17 tcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| | |||| | |||| |||||||||| ||||||    
T  15577413 tcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactgacccccgaaccctaaatcttttcaaaatg 15577321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 6e-22; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 12392513 - 12392428
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatcttt 101  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||||||||| ||||||||| |||||| | |||| |||||||||    
T  12392513 atcaagaggttctcgtagagtactacaaacgtttagggtgctaacaccttccctaaacgtaactaacccccgaaccataaatcttt 12392428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 4831074 - 4830921
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  |||| || |||| | |||| ||| |||||||||| |    
T  4831074 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaaccttcgaacccttaatc-tttaaaaatgtggt-a 4830977  T
Q  116 tttgaacttctttttccaatttctttt--aaaaaattaacagttcaatcgtgaaataa 171  Q
    |||||||  ||||||||| ||||||||  ||||||||||  ||||| |||||||||||    
T  4830976 tttgaac--ctttttccactttcttttgaaaaaaattaaatgttcagtcgtgaaataa 4830921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 846734 - 846899
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  ||||||| ||||||||||||  | |||| |||||  | |||| ||||||||||||||||| |||| ||    
T  846734 caagaggttcccgtagagtactacggacataaagggtgccaacaccttccttttatgtaactaacctccgaaccctaaatctttttaaaatggggtagtt 846833  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||  ||||| |||||||||    
T  846834 tgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaat-gaattagtgagtcaaa 846899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 854109 - 854274
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  ||||||| ||||||||||||  | |||| |||||  | |||| ||||||||||||||||| |||| ||    
T  854109 caagaggttcccgtagagtactacggacataaagggtgccaacaccttccttttatgtaactaacctccgaaccctaaatctttttaaaatggggtagtt 854208  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||  ||||| |||||||||    
T  854209 tgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaat-gaattagtgagtcaaa 854274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 1212113 - 1212278
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  ||||||| ||||||||||||  | |||| |||||  | |||| ||||||||||||||||| |||| ||    
T  1212113 caagaggttcccgtagagtactacggacataaagggtgccaacaccttccttttatgtaactaacctccgaaccctaaatctttttaaaatggggtagtt 1212212  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||  ||||| |||||||||    
T  1212213 tgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaat-gaattagtgagtcaaa 1212278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 839571 - 839724
Alignment:
Q  30 gtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatttgaacttctttt 129  Q
    ||||| ||||||| ||||  ||||||||||||||||||||  | |||| |||||| | |||| |||||||||| |||||| |||| ||||||||  ||||    
T  839571 gtagagtactacggacataaagggtgctaacaccttccttttatgtaactaacccccgaaccctaaatcttttcaaaatggggtagtttgaact--tttt 839668  T
Q  130 tccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    |||  ||| | ||||||||||||  ||||| |||||||||  ||||| |||||||||    
T  839669 tcccctttttcttaaaaaattaaatgttcagtcgtgaaat-gaattagtgagtcaaa 839724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 1204751 - 1204904
Alignment:
Q  30 gtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatttgaacttctttt 129  Q
    ||||| ||||||| ||||  ||||||||||||||||||||  | |||| |||||| | |||| |||||||||| |||||| |||| ||||||||  ||||    
T  1204751 gtagagtactacggacataaagggtgctaacaccttccttttatgtaactaacccccgaaccctaaatcttttcaaaatggggtagtttgaact--tttt 1204848  T
Q  130 tccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    |||  ||| | ||||||||||||  ||||| |||||||||  ||||| |||||||||    
T  1204849 tcccctttttcttaaaaaattaaatgttcagtcgtgaaat-gaattagtgagtcaaa 1204904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 12408366 - 12408293
Alignment:
Q  28 tcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatcttt 101  Q
    ||||||| |||||| ||| ||||||||||||||||||||| ||||||||| |||||||| |||| |||||||||    
T  12408366 tcgtagagtactacaaacgtttagggtgctaacaccttccctaaacgtaactaaccctcgaaccataaatcttt 12408293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 12606074 - 12605981
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||  |||  ||||| | |||| ||||||| || ||||||    
T  12606074 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccttaaatataaccaacccccgaaccctaaatctcttcaaaatg 12605981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 16263790 - 16263697
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  16263790 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 16263697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 16280483 - 16280390
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  16280483 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 16280390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 16294685 - 16294592
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  16294685 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 16294592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 17465125 - 17465218
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| |||||| ||||||| || ||||||    
T  17465125 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccaaaccctaaatctcttcaaaatg 17465218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 17588089 - 17587996
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| |||||| ||||||| || ||||||    
T  17588089 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccaaaccctaaatctcttcaaaatg 17587996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 42629501 - 42629393
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| ||||||||||||||||| ||||     
T  42629501 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatctttttaaaatggggtag 42629402  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  42629401 tttgaactt 42629393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 26125582 - 26125668
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttt 102  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||||||    
T  26125582 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctttt 26125668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 791969 - 791876
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  791969 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 791876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 4889244 - 4889151
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||| ||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  4889244 atcaagaggttctcgtagaatactacgaatatttagggtgctaataccatccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 4889151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 7341975 - 7341882
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||| ||||||| ||||  |||| ||||| | |||| ||||||| || ||||||    
T  7341975 atcaagaggttctcgtagagtactacgaatatttaggatgctaataccttccctaaatataatcaacccccgaaccctaaatctcttcaaaatg 7341882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 16271456 - 16271363
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  16271456 atcaagaggttctcgtagagtactacgaatatttagagtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 16271363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 37288022 - 37288115
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  37288022 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 37288115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 43907597 - 43907761
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||   | || ||| |||      
T  43907597 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatc---tcaatatggggtgt 43907693  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||| |||| ||  ||||  ||||||||||||  ||||| ||||||||| |||||| |||||||||    
T  43907694 tttgaactttttttccctctttc--ttaaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 43907761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 355835 - 355991
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||| |||| |||||| ||||||||||||  |||||||||| ||||||| |  | ||||  ||||| |||||  | |||||||| |||||| | | |    
T  355835 atcaagaagttcacgtagagtactacgaacataaagggtgctaataccttccctttatgtaaccaacccccaaacgcttaatcttttaaaaatg-gttta 355933  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaa-tcgtgaaataaaat 174  Q
    ||||||||  |||||||| |||| ||| ||||||||| ||||||| ||||||||||||||    
T  355934 tttgaact--tttttccattttccttttaaaaattaaaagttcaagtcgtgaaataaaat 355991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 34131487 - 34131379
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  ||||||| |||||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  34131487 atcaagaggttcccgtagagtactacggacataaagggtgcgaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 34131388  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  34131387 tttgaactt 34131379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 34137780 - 34137673
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  34137780 atcaagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaa-taacccccgaaccctaaatcttttcaaaatggggtag 34137682  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  34137681 tttgaactt 34137673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 36900427 - 36900580
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||| | |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  36900427 atcaagaggttcccgtagagtactacggacataaagggtgctaatacctttcctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 36900526  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  |||  || ||||||||||  ||||| |||||||||||    
T  36900527 tttgaact--tttttccccttttcttaaaaaaattaaatgttcagtcgtgaaataa 36900580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 44417920 - 44417870
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttc 66  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  44417920 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttc 44417870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 12585762 - 12585855
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| || |||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  12585762 atcaagaggttctcgtagagtattacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 12585855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 1857364 - 1857308
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||| ||||||| ||||    
T  1857364 atcaagaggttctagtagagtactacgaatatttagggtgctaataccttccctaaa 1857308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 8911305 - 8911197
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||| | ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  8911305 atcaagaggttcccgtagagtactatggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 8911206  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  8911205 tttgaactt 8911197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 18777728 - 18777672
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| || |||| ||||    
T  18777728 atcaagaggttctcgtagagtactacgaatatttagggtgctaatactttccctaaa 18777672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 19096222 - 19096115
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| |||||||||  | |||| |||||| | |||| |||||| |||| ||||| ||||     
T  19096222 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccttttatgtaactaacccccgaaccctaaatc-ttttcaaatggggtag 19096124  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  19096123 tttgaactt 19096115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 23445728 - 23445784
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| |||||| ||  ||||||||||||||||||||| ||||    
T  23445728 atcaagaggttctcgtagagtactactaatgtttagggtgctaacaccttccctaaa 23445784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 30363281 - 30363173
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||||||  |||||||||| ||||||| |    |||| |||||| | |||| |||||||||| || ||| |||      
T  30363281 atcaagaggttctcgtagagtactacgaacataaagggtgctaataccttccctttgtgtaactaacccccgaaccctaaatcttttcaatatggggtgt 30363182  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  30363181 tttgaactt 30363173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 30377346 - 30377238
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||||||  |||||||||| ||||||| |    |||| |||||| | |||| |||||||||| || ||| |||      
T  30377346 atcaagaggttctcgtagagtactacgaacataaagggtgctaataccttccctttgtgtaactaacccccgaaccctaaatcttttcaatatggggtgt 30377247  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  30377246 tttgaactt 30377238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 44411704 - 44411628
Alignment:
Q  23 ggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatct 99  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| |||||| |||||||    
T  44411704 ggttctcgtagactactacgaatatttagggtgctaataccttccctaaatataaccaacccccaaaccctaaatct 44411628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 3422397 - 3422346
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    |||| |||||||||||||| ||||||||| |||||||||||||| |||||||    
T  3422397 atcaggaggttctcgtagagtactacgaatatttagggtgctaataccttcc 3422346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 3431553 - 3431502
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    |||| |||||||||||||| ||||||||| |||||||||||||| |||||||    
T  3431553 atcaggaggttctcgtagagtactacgaatatttagggtgctaataccttcc 3431502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 9462327 - 9462481
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  9462327 atcaagaggttcccgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 9462426  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||| ||  ||||||  | ||||||||  ||||| |||||||||||    
T  9462427 tttgaactt-ttttccccttttcttaaataaaattaaatgttcagtcgtgaaataa 9462481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 9476085 - 9476239
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  9476085 atcaagaggttcccgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 9476184  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||| ||  ||||||  | ||||||||  ||||| |||||||||||    
T  9476185 tttgaactt-ttttccccttttcttaaataaaattaaatgttcagtcgtgaaataa 9476239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 20029270 - 20029321
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    ||||||||||||||||||| ||||||||||||  |||||||||| |||||||    
T  20029270 atcaagaggttctcgtagagtactacgaacataaagggtgctaataccttcc 20029321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 28416511 - 28416678
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||  |||||| ||||||| ||||  |||||||||| ||||||| |  | | || |||||| | |||| |||||||||| |||  | ||||     
T  28416511 atcaagaggtttccgtagagtactacggacataaagggtgctaataccttccctttatggaactaacccccgaaccctaaatcttttcaaataggggtag 28416610  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||  |||||||  |||||||| |||||||||  ||||| |||||||||  ||||| |||||||||    
T  28416611 tttgaact--tttttcccctttctttttaaaaattaaatgttcagtcgtgaaat-gaattagtgagtcaaa 28416678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 8955420 - 8955534
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| | |||| ||||||| ||||  |||||||||| ||||||  |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  8955420 atcaagaggttcccatagagtactacggacataaagggtgctaataccttctctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 8955519  T
Q  116 tttgaacttcttttt 130  Q
    ||||||||| |||||    
T  8955520 tttgaactttttttt 8955534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 19242513 - 19242349
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaa-atgtggtaat 116  Q
    |||||||||||| |||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| ||| ||| |||| |    
T  19242513 caagaggttctcatagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaatatg-ggtagt 19242415  T
Q  117 ttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    |||||||  |||||||  ||| || | |||||||||  ||||| ||||||||| |||||| |||||||||    
T  19242414 ttgaact--tttttcc-cttttttcttaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 19242349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 42015834 - 42015728
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| |||||| |||  ||    
T  42015834 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtggtt 42015735  T
Q  118 tgaactt 124  Q
    |||||||    
T  42015734 tgaactt 42015728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 805796 - 805711
Alignment:
Q  24 gttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  805796 gttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 805711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 186
Target Start/End: Complemental strand, 17014138 - 17014005
Alignment:
Q  50 agggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatttgaacttctttttccaatttcttttaaaaaat 149  Q
    |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| |||||| | || ||||||||  |||||||  ||| | |||||||||    
T  17014138 agggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatgggatagtttgaact--tttttcccctttttcttaaaaaat 17014041  T
Q  150 taacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    |||  ||||| ||||||||| |||||| |||||||||    
T  17014040 taaatgttcagtcgtgaaat-aaattagtgagtcaaa 17014005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 23876814 - 23876649
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||    
T  23876814 caagaggttcccgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtt 23876715  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    |||||||  ||||||  |||  || | ||||||||  ||||| ||||||||| |||||| |||||||||    
T  23876714 tgaactt--ttttccccttttcttaataaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 23876649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 23885670 - 23885505
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||    
T  23885670 caagaggttcccgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtt 23885571  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    |||||||  ||||||  |||  || | ||||||||  ||||| ||||||||| |||||| |||||||||    
T  23885570 tgaactt--ttttccccttttcttaataaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 23885505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 6109469 - 6109616
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||||||||  |||||||||| | |||||||  | ||||  ||| | |||||| |  ||||||| |||||||||| |    
T  6109469 atcaagaggttcccgtagagtactacgaacatagagggtgctaatatcttccttttatgtaaccaacacccaaacccttcatcttttaaaaatgtggt-a 6109567  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaa 167  Q
    |||||||   |||||||| |||||| |  |||||||| |||||| |||||||    
T  6109568 tttgaac--atttttccactttcttat-gaaaattaaaagttcagtcgtgaa 6109616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 12595536 - 12595592
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||| ||||| || |||||| |||||||||||||| ||||||| ||||    
T  12595536 atcaagaggttcttgtagagtattacgaatatttagggtgctaataccttccctaaa 12595592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 16386736 - 16386628
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  16386736 atcaagaggttcccgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 16386637  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  16386636 tttgaactt 16386628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 16400863 - 16400755
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  16400863 atcaagaggttcccgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 16400764  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  16400763 tttgaactt 16400755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 46298849 - 46298798
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    ||||||||||||||||||| ||||||||||||  |||||| ||| |||||||    
T  46298849 atcaagaggttctcgtagagtactacgaacataaagggtgttaataccttcc 46298798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 3334831 - 3334680
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| ||||||  || || |||||||||| |||||| |||| ||    
T  3334831 caagaggttcccgtagagtactacggacataaagggtgctaataccttccatttatgtaactaacccctaacccctaaatcttttcaaaatggggtagtt 3334732  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
     ||||||  ||| ||  ||| || | |||||||||  ||||| |||||||||||    
T  3334731 cgaactt--tttcccccttttttcttaaaaattaaatgttcagtcgtgaaataa 3334680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 4854375 - 4854481
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    ||||||||||||||||| ||||||| ||||  |||||||||| ||||||| |    |||| |||||| | |||| |||||||||| || ||| |||  ||    
T  4854375 caagaggttctcgtagagtactacggacataaagggtgctaataccttccctttttgtaactaacccccgaaccctaaatcttttcaatatggggtgttt 4854474  T
Q  118 tgaactt 124  Q
    |||||||    
T  4854475 tgaactt 4854481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 11586823 - 11586889
Alignment:
Q  45 catttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtg 111  Q
    ||||||||||||||||| ||||| |  |||||| |||||| | ||||| ||||||||| ||||||||    
T  11586823 catttagggtgctaacatcttccctttacgtaactaacccccgaacctaaaatcttttaaaaatgtg 11586889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 6645542 - 6645694
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||||||| || ||||||||| ||||| |||| ||| | ||||| ||||  |||  ||||| | |||| | |||| ||| |||||||||| |    
T  6645542 atcaagaggttctcgttgagtactacgaatatttaaggtgttaatatcttccctaaatataaccaacccccgaacccttaatc-tttaaaaatgtggt-a 6645639  T
Q  116 tttgaacttctttttccaatttctttt-aaaaaattaacagttcaatcgtgaaataa 171  Q
    |||||||  |||||| || |||||||| ||||||||||  ||||| | |||||||||    
T  6645640 tttgaac--cttttttcactttcttttgaaaaaattaaatgttcagttgtgaaataa 6645694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 25791 - 25638
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| ||||||||||||||||| ||||     
T  25791 atcaagaggttcccgtagagtactacggacatgaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatctttttaaaatggggtag 25692  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  25691 tttgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaataa 25638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 18501605 - 18501772
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||| | |||   ||||||||| |||||| ||||     
T  18501605 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaacccccgaactcaaaatcttttcaaaatggggtag 18501704  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||  |||||||  |||  || | ||||||||  ||||| ||||||||| |||||| |||||||||    
T  18501705 tttgaact--tttttccccttttcttaataaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 18501772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 21749180 - 21749087
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||||||| ||||  |||  ||||||| |||| |||||||||| ||||||    
T  21749180 atcaagaggttctcgtagagtactacaaatatttagggtgctaacaccttccctaaatataaccaaccctcgaaccctaaatcttttcaaaatg 21749087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 21753757 - 21753664
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||||||| ||||  |||  ||||||| |||| |||||||||| ||||||    
T  21753757 atcaagaggttctcgtagagtactacaaatatttagggtgctaacaccttccctaaatataaccaaccctcgaaccctaaatcttttcaaaatg 21753664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 21767908 - 21767815
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  21767908 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 21767815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 39651409 - 39651574
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| |||| ||    
T  39651409 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtagtt 39651508  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  |||  || ||||||||||  ||||| ||||||||| |||||| |||||||||    
T  39651509 tgaact--tttttccccttttcttaaaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 39651574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 15812225 - 15812070
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||  ||   ||||| | |||| | ||||  || |||||||||| |    
T  15812225 atcaagaggttctcgtagaatactacgaatatttagggtgctaataccttccctaaatatacccaacccccgaacccttaatc--ttaaaaatgtggt-a 15812129  T
Q  116 tttgaacttctttttccaatttctttt---aaaaaattaacagttcaatcgtgaaataaaa 173  Q
    |||||||  ||||||||| ||||||||   |||||||||| |||||| ||| |||||||||    
T  15812128 tttgaac--ctttttccactttcttttgaaaaaaaattaaaagttcagtcgggaaataaaa 15812070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 24868298 - 24868144
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||| ||||||| || |||||| |||||||||||||| ||||||||||||  |||  ||||| | |||  | |||| ||| |||||||||| |    
T  24868298 atcaagaggttttcgtagagtattacgaatatttagggtgctaataccttccttaaatataaccaacccccgaacacttaatc-tttaaaaatgtggt-a 24868201  T
Q  116 tttgaacttctttttccaatttctttt-aaaaaattaacagttcaatcgtgaaataaaa 173  Q
    |||||||  ||||||||| |||||||| |||||| ||| |||||| |||||||||||||    
T  24868200 tttgaac--ctttttccactttcttttgaaaaaactaaaagttcagtcgtgaaataaaa 24868144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 40389355 - 40389174
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||| ||||||| ||||  |||  ||||| | |||| | |||| |||||||||||||| |    
T  40389355 atcaagaggttctcgtagagtactacgaatatttagggtgttaataccttccataaatataacaaacccccgaacccttaatc-ttttaaaatgtggt-a 40389258  T
Q  116 tttgaacttctttttccaatttctttt-aaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaagctaactaaatagct 201  Q
    |||||||   |||||||| ||||||||  ||||||||| |||||| ||||| ||||||| || |||||| | |||||  ||||||||    
T  40389257 tttgaac--atttttccactttcttttggaaaaattaaaagttcagtcgtg-aataaaaatagtgagtctatgctaatcaaatagct 40389174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 35082313 - 35082220
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||| ||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  35082313 atcaagaggttctcgtagagtactacgaatatttagggtgctaacatcttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 35082220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 18991464 - 18991572
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  18991464 atcaagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 18991563  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  18991564 tttgaactt 18991572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 27342132 - 27342024
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  ||| ||||||   |||| |||||||||| |||  | ||||     
T  27342132 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataactaacccctgaaccctaaatcttttcaaataggggtag 27342033  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  27342032 tttgaactt 27342024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 27343242 - 27343134
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  ||| ||||||   |||| |||||||||| |||  | ||||     
T  27343242 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataactaacccctgaaccctaaatcttttcaaataggggtag 27343143  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  27343142 tttgaactt 27343134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 5872942 - 5872789
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||| |||| || ||| |||      
T  5872942 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaat-ttttcaatatggggtgt 5872844  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||||||  ||| | ||||||||| ||  ||||| |||||||||||    
T  5872843 tttgaactt-tttttcccctttttcttaaaaaataaaatgttcagtcgtgaaataa 5872789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 22936175 - 22936327
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  ||||||||||||||||||||  | |||| |||||| | ||||  ||||||||| |||||| |||| ||    
T  22936175 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccttttatgtaactaacccccgaacccaaaatcttttcaaaatggggtagtt 22936274  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaa 172  Q
    ||||||  |||||||  |||  || | ||||||||  ||||| ||||||||||||    
T  22936275 tgaact--tttttccccttttcttaataaaattaaatgttcagtcgtgaaataaa 22936327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 22942138 - 22942290
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  ||||||||||||||||||||  | |||| |||||| | ||||  ||||||||| |||||| |||| ||    
T  22942138 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccttttatgtaactaacccccgaacccaaaatcttttcaaaatggggtagtt 22942237  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaa 172  Q
    ||||||  |||||||  |||  || | ||||||||  ||||| ||||||||||||    
T  22942238 tgaact--tttttccccttttcttaataaaattaaatgttcagtcgtgaaataaa 22942290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 22956033 - 22956185
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  ||||||||||||||||||||  | |||| |||||| | ||||  ||||||||| |||||| |||| ||    
T  22956033 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccttttatgtaactaacccccgaacccaaaatcttttcaaaatggggtagtt 22956132  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaa 172  Q
    ||||||  |||||||  |||  || | ||||||||  ||||| ||||||||||||    
T  22956133 tgaact--tttttccccttttcttaataaaattaaatgttcagtcgtgaaataaa 22956185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 5869831 - 5869775
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  5869831 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 5869775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 20273690 - 20273634
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  20273690 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 20273634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 29586556 - 29586612
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  29586556 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 29586612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 378380 - 378494
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | || | |||||||||| |||||| ||||     
T  378380 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaatcctaaatcttttcaaaatggggtag 378479  T
Q  116 tttgaacttcttttt 130  Q
    ||||||||| |||||    
T  378480 tttgaactttttttt 378494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 21070357 - 21070525
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| || ||| ||||     
T  21070357 atcaagaggttcccgtagagtactacggacataaagggtgctaaaaccttccctttatgtaactaacccccgaacccaaaatcttttcaatatggggtag 21070456  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||| |||  ||  ||||||  ||||||||||  ||||| ||||||||| |||||| |||||||||    
T  21070457 tttgaactt-tttcccctttttcttaaaaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 21070525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 12376425 - 12376590
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||    
T  12376425 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtt 12376524  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  |||  || | ||||||||  ||||| ||||||||| |||||| |||||||||    
T  12376525 tgaact--tttttccccttttcttaataaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 12376590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 12390252 - 12390417
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||    
T  12390252 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtt 12390351  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  |||  || | ||||||||  ||||| ||||||||| |||||| |||||||||    
T  12390352 tgaact--tttttccccttttcttaataaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 12390417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 28459644 - 28459516
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||| ||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| | |||| ||| ||||| |||| |    
T  28459644 atcaagaggttatcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaacccttaatc-tttaaaaatatggt-a 28459547  T
Q  116 tttgaacttctttttccaatttcttttaaaaaa 148  Q
    |||||||  ||||||||| |||||||| |||||    
T  28459546 tttgaac--ctttttccactttcttttgaaaaa 28459516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 17331743 - 17331635
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| || ||| |||      
T  17331743 atcaagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaatatggggtgt 17331644  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  17331643 tttgaactt 17331635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 18971899 - 18971749
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    ||||||||||||||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||  | |||| ||    
T  18971899 caagaggttctcgtagagtactacggacataaagggtgctaataccttccctttatgtaactaaccc-cgaacccaaaatcttttcaaataggggtagtt 18971801  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  18971800 tgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaataa 18971749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 36736675 - 36736843
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  | |||||||| |||||||||  | |||| |||| | | |||| |||||| ||| |||| | ||||     
T  36736675 atcaagaggttcccgtagagtactacggacataaaaggtgctaataccttccttttatgtaactaacgcccgaaccctaaatc-tttcaaaacggggtag 36736773  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||| |||| ||  ||| | ||||||||||||  ||| | ||||||||| |||||| |||||||||    
T  36736774 tttgaactttttttccccctttttcttaaaaaattaaatgtttagtcgtgaaat-aaattagtgagtcaaa 36736843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 12368673 - 12368508
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||  ||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| || ||| |||  ||    
T  12368673 caagaggttcccgtagagtactacagacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaatatggggttgtt 12368574  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  ||| || | |||||||||  ||||| ||||||||| |||||| |||||||||    
T  12368573 tgaact--tttttccccttttttcttaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 12368508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 19883123 - 19882971
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  ||||| |||| ||||||| |  |  |||  |||||   |||| ||||||||||||||||| ||||     
T  19883123 atcaagaggttcccgtagagtactacggacataaagggtactaataccttccctttatataaccaacccctgaaccctaaatctttttaaaatggggtag 19883024  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  ||| || |||||||||||  ||||| |||||||||||    
T  19883023 tttgaact--tttttccccttt-ttctaaaaaattaaatgttcagtcgtgaaataa 19882971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 45487379 - 45487226
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatc-tttttaaaatgtggta 114  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||| ||||||| ||| |||     
T  45487379 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttttaatatggggtg 45487280  T
Q  115 atttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
     ||||||||| |||| ||  |||||||  |||||||||  ||||| |||||||||||    
T  45487279 gtttgaactt-ttttccccttttcttt--aaaaattaaatgttcagtcgtgaaataa 45487226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2175 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold2175
Description:

Target: scaffold2175; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 572 - 738
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||||||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  572 atcaagaggttcccgtagagtactacgaacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 671  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||| |||  ||  ||||||   |||||||||  ||||| ||||||||| |||||| |||||||||    
T  672 tttgaacttttttcccctttttctt---aaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 15482 - 15635
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||| | ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  15482 atcaagaggttcccgtatagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 15581  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  15582 tttgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaataa 15635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 2334044 - 2333961
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatct 99  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||||| |||| |||||||    
T  2334044 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaaccctcgaaccctaaatct 2333961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 20430745 - 20430851
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||||||||| ||||  |||  ||||| | ||||  ||||||||| |||||| ||||     
T  20430745 atcaagaggttctcgtagagtactacgaatatttagagtgctaacaccttccctaaatataaccaacccccgaacccaaaatcttttcaaaatggggtag 20430844  T
Q  116 tttgaac 122  Q
    |||||||    
T  20430845 tttgaac 20430851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 26197052 - 26196889
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  ||||||||||||||||||||  | |||| |||||| | |||| ||||||||||   |||| |||| ||    
T  26197052 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccttttatgtaactaacccccgaaccctaaatctttt--caatggggtagtt 26196955  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  ||| | ||||||||||||  ||||| ||||||||| |||||| |||||||||    
T  26196954 tgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 26196889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 2686862 - 2686955
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  2686862 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 2686955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 20312121 - 20312028
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  20312121 atcaagaggttctcgtagactactacgaatatttagggtgctaacaccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 20312028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 35077131 - 35077187
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  35077131 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaa 35077187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 44319658 - 44319773
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||| ||| || ||| ||||     
T  44319658 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccgtaaatataaccaacccccgaaccctaaatc-tttcaatatggggtag 44319756  T
Q  116 tttgaacttctttttcc 132  Q
    ||||||||| |||||||    
T  44319757 tttgaacttttttttcc 44319773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 9009791 - 9009945
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||| | | || ||| |||      
T  9009791 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatc-tctcaatatggggtgt 9009889  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||||||  ||| | ||||||||| ||  ||||| |||||||||||    
T  9009890 tttgaacttttttttcccctttttcttaaaaaataaaatgttcagtcgtgaaataa 9009945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 13187709 - 13187820
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||||||||||| ||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| |||||| |||| ||    
T  13187709 caagaggttcccgtagaatactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtagtt 13187808  T
Q  118 tgaacttctttt 129  Q
    ||||||| ||||    
T  13187809 tgaacttttttt 13187820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 20978138 - 20978032
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | ||||||||||| | |||| |||||||||| |||||| |||| ||    
T  20978138 caagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaattaacccccgaaccctaaatcttttcaaaatggggtagtt 20978039  T
Q  118 tgaactt 124  Q
    |||||||    
T  20978038 tgaactt 20978032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 18099690 - 18099746
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  18099690 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 18099746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 18702904 - 18702848
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||    
T  18702904 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccatccctaaa 18702848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 22429292 - 22429445
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| ||  || ||||     
T  22429292 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaagttggggtag 22429391  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  22429392 tttgaact--tttttcccttttttcttaaaaaattaaatgttcagtcgtgaaataa 22429445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 44831234 - 44831178
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  44831234 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 44831178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 22838176 - 22838070
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||||||||  |||||||||| ||||||| |  | |||| |||||  | |||| |||||||||| |||||| |||| ||    
T  22838176 caagaggttcccgtagagtactacgaacataaagggtgctaataccttccctttatgtaactaacctccgaaccctaaatcttttcaaaatggggtagtt 22838077  T
Q  118 tgaactt 124  Q
    |||||||    
T  22838076 tgaactt 22838070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 49934469 - 49934559
Alignment:
Q  19 aagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    |||||||||||||||| |||||| || |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||| ||||||||||    
T  49934469 aagaggttctcgtagagtactacaaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcattttaaaatg 49934559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 6203855 - 6203690
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| || ||| |||  ||    
T  6203855 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaatatggggttgtt 6203756  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  ||| || | |||||||||  ||||| ||||||||| |||||| |||||||||    
T  6203755 tgaact--tttttccccttttttcttaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 6203690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 20640384 - 20640276
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||||||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| || ||| |||      
T  20640384 atcaagaggttcccgtagagtactacgaacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaatatggggttg 20640285  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  20640284 tttgaactt 20640276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 22110738 - 22110585
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | | || |||||| | ||||  ||||||||| |||||| ||||     
T  22110738 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatggaactaacccccgaacccaaaatcttttcaaaatggggtag 22110639  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  ||| | ||||||||| ||  ||||| |||||||||||    
T  22110638 tttgaact--tttttcccctttatcttaaaaaataaaatgttcagtcgtgaaataa 22110585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 22114587 - 22114434
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | | || |||||| | ||||  ||||||||| |||||| ||||     
T  22114587 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatggaactaacccccgaacccaaaatcttttcaaaatggggtag 22114488  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||  |||||||  ||| | ||||||||| ||  ||||| |||||||||||    
T  22114487 tttgaact--tttttcccctttatcttaaaaaataaaatgttcagtcgtgaaataa 22114434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 45499005 - 45499172
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||| | ||||  |||||||||| ||||||| |  | |||| |||||  | |||| |||||||||| |||||| ||||     
T  45499005 atcaagaggttcccgtagagtactatggacataaagggtgctaataccttccctttaagtaactaacctccgaaccctaaatcttttcaaaatggggtag 45499104  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  | |||||||  ||| | ||||||||||||   |||| ||||||||| |||||| |||||||||    
T  45499105 tttgaa--tttttttcccctttttcttaaaaaattaaatattcagtcgtgaaat-aaattagtgagtcaaa 45499172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 5622414 - 5622300
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  5622414 atcaagaggttcccgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 5622315  T
Q  116 tttgaacttcttttt 130  Q
    ||||||||| |||||    
T  5622314 tttgaactttttttt 5622300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 5636553 - 5636439
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  5636553 atcaagaggttcccgtagagtactacggacatagagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 5636454  T
Q  116 tttgaacttcttttt 130  Q
    ||||||||| |||||    
T  5636453 tttgaactttttttt 5636439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 1962909 - 1963063
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatcttttt-aaaatgtggta 114  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | | || |||||| | ||||  |||||||||| |||||| ||||    
T  1962909 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatggaactaacccccgaacccaaaatctttttcaaaatgaggta 1963008  T
Q  115 atttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
     ||||||||  |||||||  ||  | ||||||||||||  ||||| |||||||||||    
T  1963009 gtttgaact--tttttccccttcttcttaaaaaattaaatgttcagtcgtgaaataa 1963063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 6196004 - 6195839
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||  ||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| || ||| |||  ||    
T  6196004 caagaggttcccgtagagtactacagacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaatatggggttgtt 6195905  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  ||| || | |||||||||  ||||| ||||||||| |||||| |||||||||    
T  6195904 tgaact--tttttccccttttttcttaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 6195839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 27171196 - 27171289
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    |||||||||| |||||||| |||||| || |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  27171196 atcaagaggtactcgtagagtactacaaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 27171289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 2415426 - 2415318
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  2415426 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 2415327  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  2415326 tttgaactt 2415318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 16886797 - 16886908
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| |||  | |||| ||    
T  16886797 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaaataggggtagtt 16886896  T
Q  118 tgaacttctttt 129  Q
    ||||||| ||||    
T  16886897 tgaacttttttt 16886908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 39456348 - 39456502
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||  ||||     
T  39456348 atcaagaggttcacgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaattgggtag 39456447  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||| ||||| |||||||  |||  || | ||||||||  ||||| |||||||||||    
T  39456448 tttaaactt-tttttccccttttcttaataaaattaaatgttcagtcgtgaaataa 39456502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 1957218 - 1957369
Alignment:
Q  19 aagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatcttttt-aaaatgtggtaatt 117  Q
    ||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | | || |||||| | ||||  |||||||||| |||||| |||| ||    
T  1957218 aagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatggaactaacccccgaacccaaaatctttttcaaaatggggtagtt 1957317  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    |||||||  ||||||  ||  | ||||||||||||  ||||| |||||||||||    
T  1957318 tgaactt--ttttccccttcttcttaaaaaattaaatgttcagtcgtgaaataa 1957369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 22568887 - 22568781
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| || ||| |||  ||    
T  22568887 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaatatggggttgtt 22568788  T
Q  118 tgaactt 124  Q
    |||||||    
T  22568787 tgaactt 22568781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 25924794 - 25924688
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    ||||||||||||||||| ||||||| ||||  |||||||||| ||||||| |    |||| |||||| | |||| |||||||||| || ||| |||  ||    
T  25924794 caagaggttctcgtagagtactacgtacataaagggtgctaataccttccctttgtgtaactaacccccgaaccctaaatcttttcaatatggggtgttt 25924695  T
Q  118 tgaactt 124  Q
    |||||||    
T  25924694 tgaactt 25924688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 14803466 - 14803299
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatcttttta-aaatgtggta 114  Q
    ||||||| |||| |||||| ||||||| ||||  |||||||||| ||||||| |  | | || |||||| | ||||  ||||||||||  ||||| ||||    
T  14803466 atcaagatgttcccgtagagtactacggacataaagggtgctaataccttccctttatggaactaacccccgaacccaaaatctttttccaaatggggta 14803367  T
Q  115 atttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
     ||||||||| ||| |||  ||||| ||||||||||||  ||||| || |||||| |||||| |||||||||    
T  14803366 gtttgaactt-tttctcc--tttctcttaaaaaattaaatgttcagtcatgaaat-aaattagtgagtcaaa 14803299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 14812340 - 14812173
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatcttttta-aaatgtggta 114  Q
    ||||||| |||| |||||| ||||||| ||||  |||||||||| ||||||| |  | | || |||||| | ||||  ||||||||||  ||||| ||||    
T  14812340 atcaagatgttcccgtagagtactacggacataaagggtgctaataccttccctttatggaactaacccccgaacccaaaatctttttccaaatggggta 14812241  T
Q  115 atttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
     ||||||||| ||| |||  ||||| ||||||||||||  ||||| || |||||| |||||| |||||||||    
T  14812240 gtttgaactt-tttctcc--tttctcttaaaaaattaaatgttcagtcatgaaat-aaattagtgagtcaaa 14812173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 19368795 - 19368851
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    |||||||||||| |||||| ||||| | ||||  |||||||||||||||||| ||||    
T  19368795 atcaagaggttcccgtagagtactatggacataaagggtgctaacaccttccctaaa 19368851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0799 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0799
Description:

Target: scaffold0799; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 4548 - 4641
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  4548 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 4641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0799; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 5542 - 5364
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | ||||  ||||| | |||| |||||||||| || ||| |||  ||    
T  5542 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaaccaacccccgaaccctaaatcttttcaatatggggtgttt 5443  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtc-aaagctaactaaatagc 200  Q
    ||||   ||||||||  ||| || | |||||||||  ||||| ||||||||| |||||| |||||| |||||||| ||||||||    
T  5442 tgaa---ctttttccccttt-ttcttaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaaagctaattaaatagc 5364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 10714 - 10807
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  10714 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 10807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 186738 - 186645
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| |||||||||| ||||||    
T  186738 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatcttttcaaaatg 186645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 5690 - 5854
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |    |||| |||||| ||||||  ||||||||| |||  | |||| ||    
T  5690 caagaggttcccgtagagtactacggacataaagggtgctaataccttccctttgtgtaactaacccccaaacccaaaatcttttcaaataggggtagtt 5789  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||| |||||||  ||||||  ||||||||||  ||||| ||||||||| |||||| |||||||||    
T  5790 tgaactt-tttttcccttttctt--aaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 5854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 170234 - 170141
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  170234 atcaagaggttctcgtagagtactacgaatatttagggagctaaaaccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 170141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 25119 - 25175
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  25119 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttccctaaa 25175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 42592 - 42426
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  42592 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 42493  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||| |||  ||  ||||||   |||||||||  ||||| ||||||||| |||||| |||||||||    
T  42492 tttgaacttttttcccctttttctt---aaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaa 42426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 88551 - 88443
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| |||||| |||||||||| |||||| ||||     
T  88551 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccaaaccctaaatcttttcaaaatggggtag 88452  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  88451 tttgaactt 88443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 117461 - 117308
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    ||||||||||||||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| || ||| |||  ||    
T  117461 caagaggttctcgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaatatggggtggtt 117362  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaa 173  Q
    ||||||| |||| ||  ||||  |||||||| |||  ||||| |||||||||||||    
T  117361 tgaactttttttccccttttc--ttaaaaaaataaatgttcagtcgtgaaataaaa 117308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 1204 - 1121
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatct 99  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||  ||||  |||  ||||||| |||| |||||||    
T  1204 atcaagaggttctcgtagagtactacgaatatttagggtgctaacaccttctctaaatataaccaaccctcgaaccctaaatct 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 31992 - 31937
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaa 71  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  31992 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccttaa 31937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 91690 - 91806
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||  ||||  |||||| ||| || |||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  91690 atcaagaggttcccgtagagtactacagacataaagggtgttaatactttccatttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 91789  T
Q  116 tttgaacttctttttcc 132  Q
    ||||||||| |||||||    
T  91790 tttgaacttttttttcc 91806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 6017 - 5924
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  6017 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 5924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 1070 - 887
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| || |||||||||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| || ||| ||||     
T  1070 atcaagaggttcccgtagagtaatacgaacataaagggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaatatggggtag 971  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtc-aaagctaactaaatagc 200  Q
    ||||||||| |||| ||  |||  || ||||||||||  ||||| ||||||||| |||||| |||||| |||||||| ||||||||    
T  970 tttgaactt-ttttcccctttttcttaaaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaaagctaattaaatagc 887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 28897 - 28990
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  28897 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 28990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 56846 - 56753
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  56846 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 56753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1494 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1494
Description:

Target: scaffold1494; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 61 - 169
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||| |||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||||| ||||     
T  61 atcaagaagttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtag 160  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  161 tttgaactt 169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 2872 - 2928
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  2872 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 2928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 30256 - 30364
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||| | | |||| |||||||||| |||||| ||||     
T  30256 atcaagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaactcccgaaccctaaatcttttcaaaatggggtag 30355  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  30356 tttgaactt 30364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 14843 - 14736
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| ||||||||||||||||| | ||     
T  14843 atcaagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaaccc-cgaaccctaaatctttttaaaatgggatag 14745  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  14744 tttgaactt 14736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 1688 - 1744
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  1688 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 1744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 36205 - 36149
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  36205 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 36149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 101252 - 101432
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||  |||   |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| |||  | |||| ||    
T  101252 caagaggttcccgtagagtactacagacaaaaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaaataggggtagtt 101351  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtc-aaagctaactaaatagc 200  Q
    ||||||| |||  ||  ||||||  ||||||||||  ||||| ||||||||| |||||| |||||| ||||||||| |||||||    
T  101352 tgaacttttttcccccttttctt--aaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaaagctaaccaaatagc 101432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 69295 - 69351
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||||||| ||||    
T  69295 atcaagaggttctcgtagagtactacaaatatttagggtgctaacaccttccctaaa 69351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 4556 - 4406
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||||| |||| ||    
T  4556 caagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaaatggggtagtt 4457  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||| |||  ||  ||||||   |||||||||  ||||| |||||||||||    
T  4456 tgaacttttttcccctttttctt---aaaaattaaatgttcagtcgtgaaataa 4406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 9492 - 9409
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatct 99  Q
    ||||||| ||||| ||||| ||||||||| |||||||||||||||||||||| ||||  |||  ||||| | ||||||||||||    
T  9492 atcaagatgttctggtagagtactacgaatatttagggtgctaacaccttccctaaatataaccaacccccgaaccttaaatct 9409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 2870 - 3037
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| || ||| |||      
T  2870 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaatatggggtgt 2969  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||| |||| ||  |||| ||  |||||||||  ||||| |||||||| ||||||| |||||||||    
T  2970 tttgaactttttttccccttttcctt--aaaaattaaatgttcagtcgtgaaa-aaaattagtgagtcaaa 3037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 15350 - 15517
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| || ||| |||      
T  15350 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaatatggggtgt 15449  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||||| |||| ||  |||| ||  |||||||||  ||||| |||||||| |||||||  ||||||||    
T  15450 tttgaactttttttccccttttcctt--aaaaattaaatgttcagtcgtgaaa-aaaattagcgagtcaaa 15517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 22627 - 22473
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  22627 atcaagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 22528  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||||||  |||  || | ||||||||  ||||| |||||||||||    
T  22527 tttgaactt-tttttccctttttcttaataaaattaaatgttcagtcgtgaaataa 22473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1699 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1699
Description:

Target: scaffold1699; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 51 - 1
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttc 66  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  51 atcaagaggttctcgtagagtactacgaatatttagggtgctaataccttc 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 61 - 7
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  61 caagaggttctcgtagagtactacgaatatttagggtgctaataccttccctaaa 7  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 299198 - 299347
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    ||||||||||||||||| ||||||||| |||||||||| ||| ||||||| ||||  |||  |||||   |||| | |||| ||| |||||||||| |||    
T  299198 caagaggttctcgtagagtactacgaatatttagggtgttaataccttccctaaatataaccaacccctgaacccttaatc-tttaaaaatgtggt-att 299295  T
Q  118 tgaacttctttttccaatttcttt-taaaaaattaacagttcaatcgtgaaata 170  Q
    |||||  ||||||||| |||||||  |||||||||| |||||| | ||||||||    
T  299296 tgaac--ctttttccactttctttggaaaaaattaaaagttcagtggtgaaata 299347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 1023 - 858
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||| ||||||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||    
T  1023 caagaggttcccgtagagtactacggacatgaagggtgttaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtt 924  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||  ||||| |||||||||    
T  923 tgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaat-gaattagtgagtcaaa 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 7149 - 6984
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||| ||||||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||    
T  7149 caagaggttcccgtagagtactacggacatgaagggtgttaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtt 7050  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||  |||||||  ||| | ||||||||||||  ||||| |||||||||  ||||| |||||||||    
T  7049 tgaact--tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaat-gaattagtgagtcaaa 6984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 10296 - 10389
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    |||||||||| |||||||| ||||||||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  10296 atcaagaggtactcgtagagtactacgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 10389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 17218 - 17311
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatg 109  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||| ||||||| ||||  |||  ||||| | |||| ||||||| || ||||||    
T  17218 atcaagaggttctcgtagagtactatgaatatttagggtgctaataccttccctaaatataaccaacccccgaaccctaaatctcttcaaaatg 17311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 24954 - 25010
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||| ||||||| ||||    
T  24954 atcaagaggttctcgtagagtactacgaatatttagggtgttaataccttccctaaa 25010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 298658 - 298825
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| || ||| |||  ||    
T  298658 caagaggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaatatggggtgttt 298757  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtcaaa 186  Q
    ||||||| |||| ||  ||||||  ||||| ||||  ||||| ||||| ||  |||||| |||||||||    
T  298758 tgaactttttttccccttttcttaaaaaaatttaaatgttcagtcgtggaa-gaaattagtgagtcaaa 298825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 360904 - 360855
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    ||||||||||||||||| ||||||| ||||  ||||||||||||||||||    
T  360904 caagaggttctcgtagagtactacggacataaagggtgctaacaccttcc 360855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 3408 - 3256
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    ||||||||||||||||| | ||||||||| |||||||||||||| | ||| | ||||  |||  |||||   |||| | |||| ||| |||||||||| |    
T  3408 atcaagaggttctcgtaaagtactacgaatatttagggtgctaatatctttcctaaatataaccaacccctgaacccttaatc-tttaaaaatgtggt-a 3311  T
Q  116 tttgaacttctttttccaatttctttt-aaaaaattaacagttcaatcgtgaaata 170  Q
    ||||||| | |||||||| |||||||| ||||||| || |||||| ||||||||||    
T  3310 tttgaacct-tttttccactttcttttgaaaaaatcaaaagttcagtcgtgaaata 3256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 7369 - 7215
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||  ||||     
T  7369 atcaagaggttcacgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaattgggtag 7270  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||||| |||||||  |||  || | ||||||||  ||||| |||||||||||    
T  7269 tttgaactt-tttttccccttttcttaataaaattaaatgttcagtcgtgaaataa 7215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 2418 - 2469
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||| |||||||    
T  2418 atcaagaggttctcgtagagtactacgaatatttagggtgttaataccttcc 2469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 38883 - 38800
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatct 99  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||| ||||| | ||||  |||  ||||| | ||||||||||||    
T  38883 atcaagaggttctcgtagagtactacgaatatttagagtgctaatacctttcctaaatataaccaacccccgaaccttaaatct 38800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 12229 - 12178
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    ||||||||||||||||||| ||||||||||||  |||||||||| |||||||    
T  12229 atcaagaggttctcgtagagtactacgaacataaagggtgctaataccttcc 12178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 20485 - 20434
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    ||||||||||||||||||| ||||||||||||  |||||||||| |||||||    
T  20485 atcaagaggttctcgtagagtactacgaacataaagggtgctaataccttcc 20434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 1785 - 1898
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||   ||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||| ||||     
T  1785 atcaagaggttcccgtagagtactacggacataaggggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtag 1884  T
Q  116 tttgaacttctttt 129  Q
    ||||||||| ||||    
T  1885 tttgaacttttttt 1898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 1326 - 1277
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacacctt 65  Q
    ||||||||||||||||||| ||||||| ||||  ||||||||||||||||    
T  1326 atcaagaggttctcgtagagtactacggacataaagggtgctaacacctt 1277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 22890 - 23003
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | || |  ||||||||| |||||| ||||     
T  22890 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaaccaaaatcttttgaaaatggggtag 22989  T
Q  116 tttgaacttctttt 129  Q
    ||||||||| ||||    
T  22990 tttgaacttttttt 23003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 15234 - 15385
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    ||||| |||| |||||| |||||||| |||  |||||||||| ||||||| |  | |||| |||||  | |||  |||||||||| |||||| |||| ||    
T  15234 caagaagttcccgtagagtactacga-cataaagggtgctaataccttccctttatgtaactaacctccgaactctaaatcttttcaaaatggggtagtt 15332  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    ||||||| |||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  15333 tgaactt-tttttcccctttttcttaaaaaattaaatgttcagtcgtgaaataa 15385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 2948 - 3128
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||  |||   |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| |||  | |||| ||    
T  2948 caagaggttcccgtagagtactacagacaaaaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaaataggggtagtt 3047  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaattaatgagtc-aaagctaactaaatagc 200  Q
    ||||||| |||  ||  ||||||  ||||||||||  ||||| ||||||||| |||||| |||||| ||||||||| |||||||    
T  3048 tgaacttttttcccccttttctt--aaaaaattaaatgttcagtcgtgaaat-aaattagtgagtcaaaagctaaccaaatagc 3128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 4582 - 4474
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||  ||||     
T  4582 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaattgggtag 4483  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  4482 tttgaactt 4474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 2299 - 2407
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| | |||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | ||||  ||||||||| |||||| ||||     
T  2299 atcaagaggttcccatagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaacccaaaatcttttcaaaatggggtag 2398  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  2399 tttgaactt 2407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 14147 - 14091
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    |||||||||||||| |||| ||||||||| |||||  ||||||||||||||| ||||    
T  14147 atcaagaggttctcatagagtactacgaatatttacagtgctaacaccttccctaaa 14091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 17481 - 17425
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaa 72  Q
    |||||||||||||| |||| ||||||||| |||||  ||||||||||||||| ||||    
T  17481 atcaagaggttctcatagagtactacgaatatttacagtgctaacaccttccctaaa 17425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 57791 - 57899
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| |||   |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| |||  | ||||     
T  57791 atcaagaggttcccgtagagtactacggacaaaaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtag 57890  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  57891 tttgaactt 57899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 39921 - 39806
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgt--ggtaa 115  Q
    ||||||||||||||| | ||||||||||||  | |||||||| ||||||| |  | ||||  ||||| |||||| |||| ||||| |||||||  ||||     
T  39921 caagaggttctcgtaaagtactacgaacataaatggtgctaataccttccctttatgtaaccaacccccaaaccctaaaccttttcaaaatgtggggtag 39822  T
Q  116 tttgaacttctttttc 131  Q
    ||||||||| ||||||    
T  39821 tttgaacttttttttc 39806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1818 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1818
Description:

Target: scaffold1818; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 983 - 876
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | | || |||||| | ||||  ||||||||| |||||| ||||     
T  983 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatggaactaacccccgaacccaaaatcttttcaaaatggggtag 884  T
Q  116 tttgaact 123  Q
    ||||||||    
T  883 tttgaact 876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 11095 - 10957
Alignment:
Q  29 cgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatttgaacttcttt 128  Q
    |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||  |||||||||| |||||  |||| ||||||||| |||    
T  11095 cgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaactctaaatcttttcaaaattgggtagtttgaactt-ttt 10997  T
Q  129 ttccaatttcttttaaaaaattaacagttcaatcgtgaaa 168  Q
    ||||  ||| | ||||||||||||  ||||| ||||||||    
T  10996 ttccgctttttcttaaaaaattaaatgttcagtcgtgaaa 10957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 6278 - 6329
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    |||||||||||| |||||| ||||||| ||||  ||||||||||||||||||    
T  6278 atcaagaggttcccgtagagtactacggacataaagggtgctaacaccttcc 6329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 9547 - 9598
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    |||||||||||| |||||| ||||||| ||||  ||||||||||||||||||    
T  9547 atcaagaggttcccgtagagtactacggacataaagggtgctaacaccttcc 9598  T

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Target: scaffold0085 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 17419 - 17336
Alignment:
Q  22 aggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaa 105  Q
    |||||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||||||||||   |||| |||||||||||||    
T  17419 aggttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaattaacccctgaaccctaaatctttttaa 17336  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 39097 - 39046
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttcc 67  Q
    |||||||||||| |||||| ||||||| ||||  ||||||||||||||||||    
T  39097 atcaagaggttcccgtagagtactacggacataaagggtgctaacaccttcc 39046  T

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Target: scaffold1623 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1623
Description:

Target: scaffold1623; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 367 - 261
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| || | ||||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| || ||| |||  ||    
T  367 caagaggttcccgtagagtactacggacgtatagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaatatggggttgtt 268  T
Q  118 tgaactt 124  Q
    |||||||    
T  267 tgaactt 261  T

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Target: scaffold1473 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1473
Description:

Target: scaffold1473; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 1083 - 1228
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| | ||| |||||||  ||||  |||||||||| ||||||| |  |  ||| |||||| | ||||||||||||||| |||||| ||||     
T  1083 atcaagaggttc-cataggatactacagacataaagggtgctaataccttccctttatataactaacccccgaaccttaaatcttttcaaaatggggtag 1181  T
Q  116 tttgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtg 165  Q
    ||||||||| |||||||  ||||  ||||||||||||  ||||| |||||    
T  1182 tttgaactt-tttttcccttttc--ttaaaaaattaaatgttcagtcgtg 1228  T

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Target: scaffold0755 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0755
Description:

Target: scaffold0755; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 2711 - 2817
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| |||| || ||||  |||||||||||||||||| |  | |||| |||||| | |||| |||||||||| || ||| |||  ||    
T  2711 caagaggttcccgtagagtacttcggacataaagggtgctaacaccttccctttatgtaactaacccccgaaccctaaatcttttcaatatggggtgttt 2810  T
Q  118 tgaactt 124  Q
    |||||||    
T  2811 tgaactt 2817  T

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Target: scaffold0643 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 548 - 699
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||| | ||||  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||    
T  548 caagaggttcccgtagagtactatggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtt 647  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataa 171  Q
    |||| ||  ||||||  ||| | ||||||||||||  ||||| |||||||||||    
T  648 tgaaatt--ttttcccctttttcttaaaaaattaaatgttcagtcgtgaaataa 699  T

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Target: scaffold0435 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 6479 - 6373
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    ||||||||||  ||||| ||||||||||||  |||||||||||||||||| |  | |||| |||||| | ||||  ||||||||| || ||| |||  ||    
T  6479 caagaggttcctgtagagtactacgaacataaagggtgctaacaccttccctttatgtaactaacccccgaacccaaaatcttttcaatatggggttgtt 6380  T
Q  118 tgaactt 124  Q
    |||||||    
T  6379 tgaactt 6373  T

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Target: scaffold0183 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 29831 - 29917
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttt 102  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| ||||||| |  | |||| |||||| | |||| ||||||||||    
T  29831 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatctttt 29917  T

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Target: scaffold0114 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 33173 - 33020
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaatt 117  Q
    |||||||||| |||||| ||||||| || |  |||||||||| ||||||| |  | |||| |||||| | |||| |||||||||| |||  | |||| ||    
T  33173 caagaggttcccgtagagtactacggacgtaaagggtgctaataccttccctttatgtaactaacccccgaaccctaaatcttttcaaataggggtagtt 33074  T
Q  118 tgaacttctttttccaatttcttttaaaaaattaacagttcaatcgtgaaataaaat 174  Q
    ||||||| |||  ||  ||||||   |||||||||  ||||| ||||||||||||||    
T  33073 tgaacttttttcccctttttctt---aaaaattaaatgttcagtcgtgaaataaaat 33020  T

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Target: scaffold2020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 743 - 678
Alignment:
Q  47 tttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtgg 112  Q
    ||||||||||||||||||||| |  ||||||  ||||  | |||||||||||| ||||||||||||    
T  743 tttagggtgctaacaccttcccttcacgtaaccaacctccgaaccttaaatctctttaaaatgtgg 678  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 32446 - 32405
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgct 57  Q
    ||||||||||||||||||| ||||||||||||  ||||||||    
T  32446 atcaagaggttctcgtagagtactacgaacataaagggtgct 32405  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 164752 - 164817
Alignment:
Q  47 tttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtgg 112  Q
    ||||||||||||||||||||| |  ||||||  ||||  | |||||||||||| ||||||||||||    
T  164752 tttagggtgctaacaccttcccttcacgtaaccaacctccgaaccttaaatctctttaaaatgtgg 164817  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 17027 - 17135
Alignment:
Q  16 atcaagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttttaaaatgtggtaa 115  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||| |||||||    | |||| |||||| | ||||  ||||||||| |||||  ||||     
T  17027 atcaagaggttcccgtagagtactacggacataaagggtgctaataccttccccttatgtaactaacccccgaacccaaaatcttttcaaaatagggtag 17126  T
Q  116 tttgaactt 124  Q
    |||||||||    
T  17127 tttgaactt 17135  T

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Target: scaffold0104 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 11544 - 11460
Alignment:
Q  18 caagaggttctcgtagaatactacgaacatttagggtgctaacaccttccttaaacgtaattaaccctcaaaccttaaatctttt 102  Q
    ||||| |||| |||||| ||||||| ||||  |||||||||||||||||| |  | |||| |||||||| ||||  |||||||||    
T  11544 caagaagttcccgtagagtactacggacataaagggtgctaacaccttccctttatgtaactaaccctcgaacccaaaatctttt 11460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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