View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17997_low_2 (Length: 584)

Name: NF17997_low_2
Description: NF17997
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17997_low_2
NF17997_low_2
[»] chr7 (32 HSPs)
chr7 (3-287)||(22007656-22007940)
chr7 (19-170)||(11649155-11649306)
chr7 (348-500)||(22007947-22008107)
chr7 (13-118)||(14231202-14231304)
chr7 (289-347)||(43581350-43581408)
chr7 (285-346)||(30440681-30440742)
chr7 (291-347)||(44343656-44343712)
chr7 (284-347)||(31638759-31638822)
chr7 (284-347)||(973067-973131)
chr7 (291-347)||(8078286-8078342)
chr7 (291-347)||(31401587-31401643)
chr7 (291-347)||(34008906-34008962)
chr7 (288-347)||(39219595-39219654)
chr7 (293-347)||(727405-727459)
chr7 (293-343)||(20275527-20275577)
chr7 (294-346)||(7719522-7719574)
chr7 (291-347)||(18914995-18915051)
chr7 (292-347)||(32143179-32143235)
chr7 (291-347)||(34695122-34695178)
chr7 (287-347)||(47914153-47914213)
chr7 (284-347)||(12893292-12893355)
chr7 (289-347)||(47879057-47879115)
chr7 (291-347)||(9179767-9179823)
chr7 (294-347)||(43679363-43679417)
chr7 (291-344)||(40996912-40996966)
chr7 (294-347)||(7993029-7993082)
chr7 (294-347)||(9882496-9882549)
chr7 (302-347)||(7113358-7113404)
chr7 (285-347)||(32883659-32883721)
chr7 (294-347)||(10068353-10068406)
chr7 (294-347)||(28342234-28342287)
chr7 (294-347)||(29615024-29615077)
[»] chr3 (37 HSPs)
chr3 (19-231)||(52131268-52131475)
chr3 (284-347)||(12734101-12734164)
chr3 (291-347)||(996346-996402)
chr3 (291-347)||(3206457-3206513)
chr3 (284-347)||(37820738-37820801)
chr3 (281-347)||(20498089-20498154)
chr3 (284-344)||(16010745-16010805)
chr3 (291-347)||(19253716-19253772)
chr3 (291-347)||(33996752-33996808)
chr3 (287-346)||(29029891-29029950)
chr3 (291-347)||(22057652-22057709)
chr3 (291-347)||(10139407-10139463)
chr3 (291-347)||(33808063-33808119)
chr3 (285-347)||(40246727-40246789)
chr3 (291-346)||(29449122-29449177)
chr3 (291-346)||(51699741-51699796)
chr3 (294-347)||(6589455-6589509)
chr3 (290-344)||(54625480-54625534)
chr3 (302-347)||(35337635-35337680)
chr3 (291-347)||(52114419-52114475)
chr3 (293-344)||(27899277-27899328)
chr3 (285-347)||(23753647-23753709)
chr3 (291-345)||(25418255-25418309)
chr3 (282-347)||(10660415-10660480)
chr3 (294-347)||(48379050-48379103)
chr3 (294-346)||(15493993-15494045)
chr3 (292-347)||(18749460-18749515)
chr3 (284-347)||(36674391-36674454)
chr3 (281-347)||(17946210-17946275)
chr3 (294-347)||(1440213-1440265)
chr3 (294-347)||(11431418-11431471)
chr3 (314-347)||(28146287-28146320)
chr3 (294-347)||(39842690-39842743)
chr3 (369-401)||(9196527-9196559)
chr3 (311-347)||(44762298-44762334)
chr3 (291-347)||(45926977-45927033)
chr3 (291-335)||(50900487-50900531)
[»] chr8 (24 HSPs)
chr8 (19-222)||(5663028-5663227)
chr8 (285-347)||(24502031-24502093)
chr8 (289-347)||(7507159-7507217)
chr8 (291-347)||(23115428-23115484)
chr8 (291-347)||(24214851-24214907)
chr8 (291-347)||(42735537-42735593)
chr8 (287-347)||(42937246-42937306)
chr8 (293-347)||(41478989-41479043)
chr8 (294-347)||(26374688-26374741)
chr8 (291-347)||(2705079-2705135)
chr8 (291-347)||(26373694-26373751)
chr8 (291-347)||(32711542-32711598)
chr8 (293-347)||(43959549-43959604)
chr8 (291-344)||(5576884-5576937)
chr8 (289-347)||(42938377-42938435)
chr8 (291-347)||(8543409-8543466)
chr8 (294-347)||(32497376-32497429)
chr8 (285-347)||(14782395-14782457)
chr8 (285-347)||(44726070-44726132)
chr8 (286-335)||(2112786-2112835)
chr8 (294-347)||(4031518-4031571)
chr8 (294-347)||(9288710-9288763)
chr8 (294-343)||(39190035-39190084)
chr8 (291-335)||(29260316-29260360)
[»] chr4 (35 HSPs)
chr4 (287-347)||(24131233-24131293)
chr4 (291-347)||(22201904-22201960)
chr4 (291-347)||(25331020-25331076)
chr4 (284-347)||(1044692-1044755)
chr4 (284-347)||(28541580-28541643)
chr4 (285-346)||(7250035-7250096)
chr4 (293-347)||(31314989-31315043)
chr4 (292-346)||(46635905-46635959)
chr4 (291-347)||(42786656-42786713)
chr4 (287-347)||(25445979-25446038)
chr4 (291-347)||(30009938-30009994)
chr4 (291-347)||(41320639-41320695)
chr4 (284-347)||(55302725-55302788)
chr4 (291-347)||(41881344-41881401)
chr4 (287-347)||(25504900-25504959)
chr4 (291-347)||(40537406-40537462)
chr4 (300-347)||(32951097-32951144)
chr4 (292-347)||(1112784-1112838)
chr4 (287-347)||(7007258-7007318)
chr4 (291-347)||(37046713-37046769)
chr4 (291-347)||(37915674-37915730)
chr4 (291-347)||(39479618-39479674)
chr4 (295-334)||(44775947-44775986)
chr4 (310-347)||(34228843-34228880)
chr4 (293-346)||(53275727-53275780)
chr4 (302-346)||(19741170-19741213)
chr4 (290-346)||(27454352-27454408)
chr4 (283-347)||(27767937-27768001)
chr4 (291-335)||(49469210-49469254)
chr4 (284-347)||(5441286-5441349)
chr4 (281-347)||(20021223-20021289)
chr4 (294-347)||(28847130-28847183)
chr4 (294-347)||(54341036-54341089)
chr4 (294-347)||(23464845-23464900)
chr4 (295-347)||(49835074-49835126)
[»] chr1 (29 HSPs)
chr1 (291-347)||(22183253-22183309)
chr1 (282-347)||(28824633-28824697)
chr1 (291-347)||(953702-953758)
chr1 (291-347)||(6304515-6304571)
chr1 (291-347)||(19452111-19452167)
chr1 (291-347)||(21222031-21222087)
chr1 (291-347)||(35279555-35279611)
chr1 (291-347)||(45760271-45760327)
chr1 (291-347)||(49198528-49198584)
chr1 (284-347)||(35679389-35679452)
chr1 (284-347)||(47780495-47780558)
chr1 (291-347)||(730032-730087)
chr1 (291-347)||(49417967-49418023)
chr1 (291-346)||(33025395-33025450)
chr1 (293-347)||(47654614-47654669)
chr1 (285-347)||(50192812-50192874)
chr1 (291-341)||(28541387-28541437)
chr1 (301-347)||(31572424-31572470)
chr1 (291-346)||(14494095-14494147)
chr1 (284-347)||(32589215-32589278)
chr1 (284-347)||(6312450-6312513)
chr1 (296-347)||(48524208-48524258)
chr1 (285-347)||(9322761-9322823)
chr1 (294-347)||(9577693-9577746)
chr1 (294-347)||(15835314-15835367)
chr1 (301-346)||(25831168-25831213)
chr1 (291-336)||(34772311-34772356)
chr1 (294-346)||(25612043-25612095)
chr1 (294-346)||(45272473-45272525)
[»] chr5 (16 HSPs)
chr5 (284-347)||(21146950-21147013)
chr5 (291-347)||(7016957-7017013)
chr5 (284-347)||(33656303-33656366)
chr5 (290-347)||(27459209-27459266)
chr5 (284-347)||(43319129-43319193)
chr5 (293-346)||(5273223-5273276)
chr5 (287-347)||(6460678-6460738)
chr5 (292-345)||(16894121-16894174)
chr5 (291-347)||(32158159-32158215)
chr5 (294-347)||(7948577-7948630)
chr5 (284-347)||(14000365-14000428)
chr5 (285-347)||(4550517-4550579)
chr5 (293-347)||(9689553-9689606)
chr5 (294-347)||(22746190-22746243)
chr5 (290-347)||(27786209-27786266)
chr5 (294-347)||(37013807-37013860)
[»] chr6 (8 HSPs)
chr6 (285-347)||(1391507-1391569)
chr6 (291-347)||(2300998-2301054)
chr6 (284-347)||(6197738-6197801)
chr6 (291-347)||(29076486-29076543)
chr6 (291-347)||(29111459-29111516)
chr6 (307-347)||(7051750-7051790)
chr6 (285-347)||(31895579-31895641)
chr6 (294-346)||(14262694-14262746)
[»] scaffold0113 (1 HSPs)
scaffold0113 (291-347)||(39114-39170)
[»] scaffold0037 (1 HSPs)
scaffold0037 (291-347)||(100101-100157)
[»] chr2 (28 HSPs)
chr2 (291-347)||(22552026-22552082)
chr2 (291-347)||(24776246-24776302)
chr2 (291-347)||(31170887-31170943)
chr2 (291-346)||(9120059-9120114)
chr2 (292-347)||(14198839-14198894)
chr2 (292-347)||(44765667-44765722)
chr2 (291-347)||(12407271-12407327)
chr2 (291-347)||(16269582-16269638)
chr2 (291-347)||(20605043-20605099)
chr2 (291-347)||(26601463-26601519)
chr2 (291-347)||(35316953-35317009)
chr2 (284-347)||(1789326-1789389)
chr2 (291-347)||(305729-305786)
chr2 (294-347)||(378873-378926)
chr2 (291-347)||(43847537-43847593)
chr2 (284-347)||(43078559-43078622)
chr2 (291-337)||(14920619-14920665)
chr2 (302-347)||(32125152-32125197)
chr2 (294-347)||(33135517-33135570)
chr2 (291-347)||(19144915-19144971)
chr2 (295-330)||(5093317-5093352)
chr2 (313-347)||(21987313-21987347)
chr2 (294-347)||(26788678-26788731)
chr2 (294-347)||(28844449-28844502)
chr2 (348-401)||(38951797-38951849)
chr2 (294-346)||(3463565-3463617)
chr2 (295-347)||(28740546-28740598)
chr2 (287-335)||(29940941-29940989)
[»] scaffold0651 (1 HSPs)
scaffold0651 (293-347)||(8654-8708)
[»] scaffold0151 (1 HSPs)
scaffold0151 (290-347)||(38781-38838)
[»] scaffold0004 (1 HSPs)
scaffold0004 (291-337)||(102026-102072)
[»] scaffold0400 (1 HSPs)
scaffold0400 (291-346)||(15295-15347)
[»] scaffold0365 (1 HSPs)
scaffold0365 (291-346)||(15938-15990)
[»] scaffold0922 (1 HSPs)
scaffold0922 (284-347)||(4083-4146)
[»] scaffold0543 (1 HSPs)
scaffold0543 (294-347)||(10453-10506)
[»] scaffold0492 (1 HSPs)
scaffold0492 (294-347)||(12034-12087)
[»] scaffold1504 (1 HSPs)
scaffold1504 (294-346)||(756-808)
[»] scaffold0016 (1 HSPs)
scaffold0016 (291-335)||(81822-81866)


Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 22007656 - 22007940
Alignment:
Q  3 acatatatgcccctctgtgttcagtaaaaaggaagaacactgttgaatgattattcaatacaggtgcatccagataagtgtattacgaagactgaattca 102  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22007656 acatatacgcccctctgtgttcagtaaaaaggaagaacactgttgaatgattattcaatacaggtgcatccagataagtgtattacgaagactgaattca 22007755  T
Q  103 ttgttggcggtgtatctcgcttcgtcttcgaaacttctatcatcggcaagaccatggtcgcttttcacaagaagttaaggaacatgtagcttcacgttga 202  Q
    |||||||||||||||||||||||| |||| |||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22007756 ttgttggcggtgtatctcgcttcgacttcaaaacttctgtcatcgtcaagaccatggtcgcttttcacaagaagttaaagaacatgtagcttcacgttga 22007855  T
Q  203 ttctcctccatttcctgtcaatttggtacgctctctccatatctctctatggttatcatatacgattcatccatccaaaacttta 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22007856 ttctcctccatttcctgtcaatttggtacgctctctccatatctctctatggttatcatatacgattcatccatccaaaacttta 22007940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 11649306 - 11649155
Alignment:
Q  19 gtgttcagtaaaaaggaagaacactgttgaatgattattcaatacaggtgcatccagataagtgtattacgaagactgaattcattgttggcggtgtatc 118  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||| ||| |||||||  |||| |||||||||||||| |||||||||    
T  11649306 gtgttcactaaaaaggaagaacacggttgaatgattattcaatacaagtgcatccaggtaattgtattagcaagattgaattcattgttgacggtgtatc 11649207  T
Q  119 tcgcttcgtcttcgaaacttctatcatcggcaagaccatggtcgcttttcac 170  Q
    ||||| || ||||||| ||||| ||||||| |||||||||||||||| ||||    
T  11649206 tcgctccgacttcgaagcttctgtcatcggtaagaccatggtcgcttctcac 11649155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 348 - 500
Target Start/End: Original strand, 22007947 - 22008107
Alignment:
Q  348 acagtaagattttagggtggtttttattacttatttttgttcacaattccaattcc--------aannnnnnnngtaggtgtttaaggattctgccgtgg 439  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||          |         |||| |||||||| ||||||||||||    
T  22007947 acagtaagattttagggtggtttttattacttatttttgttcacaattccatttttttttgtagatttctttatgtagatgtttaagaattctgccgtgg 22008046  T
Q  440 tgtgtttggagtttaggtgtcatgttaggtctaatttacattttgttttgcctatcttcgt 500  Q
     |||||| |||||| ||||||||||||||||| |||| |||||||||||||||||||||||    
T  22008047 cgtgttttgagttttggtgtcatgttaggtcttatttgcattttgttttgcctatcttcgt 22008107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 14231202 - 14231304
Alignment:
Q  13 ccctctgtgttcagtaaaaaggaagaacactgttgaatgattattcaatacaggtgcatccagataagtgtattacgaagactgaattcattgttggcgg 112  Q
    |||||||| ||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||   ||||| |||||||  ||| |||||||||||    
T  14231202 ccctctgt-ttcagtaaaaaggaagaacacggttgaatga--attcaatacaggtgcatccagataataatattaggaagactagatttattgttggcgg 14231298  T
Q  113 tgtatc 118  Q
    ||||||    
T  14231299 tgtatc 14231304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 43581408 - 43581350
Alignment:
Q  289 gagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43581408 gagggtgtattggatcatgattctaaagaattttaaaagacttttttatcatgaaaaag 43581350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 30440681 - 30440742
Alignment:
Q  285 ttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30440681 ttaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaa 30440742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 44343712 - 44343656
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44343712 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 44343656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 31638759 - 31638822
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  31638759 tttaggagggtgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaag 31638822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 973067 - 973131
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaaga-cttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  973067 tttaggagggtgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaag 973131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 8078286 - 8078342
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  8078286 gggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaag 8078342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 31401587 - 31401643
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  31401587 gggtgtattggatcatgattctaaagaactttaaaagacttttttatcatgaaaaag 31401643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 34008906 - 34008962
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  34008906 gggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaag 34008962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 39219654 - 39219595
Alignment:
Q  288 ggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  39219654 ggagggtgtattggatcataattctaaggaattttaaaagacttttttatcatgaaaaag 39219595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 727405 - 727459
Alignment:
Q  293 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  727405 gtgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaag 727459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 20275577 - 20275527
Alignment:
Q  293 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaa 343  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20275577 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaa 20275527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 7719574 - 7719522
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  7719574 tgtattggatcatgattgtaaaagattttaaaagacttttttatcatgaaaaa 7719522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 18915051 - 18914995
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  18915051 gggtgtattggatcatgtatctaagggattttaaaagacttttttatcatgaaaaag 18914995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 347
Target Start/End: Complemental strand, 32143235 - 32143179
Alignment:
Q  292 ggtgtattggatcatgattctaaaggattttaaaagactt-ttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  32143235 ggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaag 32143179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 34695122 - 34695178
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  34695122 gggtgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaag 34695178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 47914153 - 47914213
Alignment:
Q  287 aggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||||    
T  47914153 aggagggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaag 47914213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 12893292 - 12893355
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||| |||||||||||||||||||||||| | ||||||||||| |||||| |||||||||||    
T  12893292 tttaggggggtgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaag 12893355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 47879057 - 47879115
Alignment:
Q  289 gagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||||    
T  47879057 gagggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaag 47879115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 9179767 - 9179823
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  9179767 gggtgtattggattagcattctaaaagattttaaaagacttttttatcatgaaaaag 9179823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 43679363 - 43679417
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaaga-cttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  43679363 tgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaag 43679417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 40996966 - 40996912
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaaga-cttttttatcatgaaa 344  Q
    |||||||||||||||||||||||| ||||||||||| |  |||||||||||||||    
T  40996966 gggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaa 40996912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 7993029 - 7993082
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||||||||    
T  7993029 tgtattggattaagattctataggattttaaaagactttttaattatgaaaaag 7993082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 9882549 - 9882496
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||||||||    
T  9882549 tgtattggattaggattctataggattttaaaagactttttaattatgaaaaag 9882496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 7113358 - 7113404
Alignment:
Q  302 atcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 347  Q
    ||||||||||||| |||||||||||||| ||||||||||||| ||||    
T  7113358 atcatgattctaagggattttaaaagactttttttatcatgacaaag 7113404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 285 - 347
Target Start/End: Original strand, 32883659 - 32883721
Alignment:
Q  285 ttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||| || |||||||||| |||||||||  ||||||||||||| ||||| || |||||||||    
T  32883659 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatgaaaaag 32883721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 10068353 - 10068406
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||  |||||||| | ||||||||||||||||||| || |||||||||    
T  10068353 tgtattggaatatgattctgatggattttaaaagactttttaattatgaaaaag 10068406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 28342234 - 28342287
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  28342234 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 28342287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 29615077 - 29615024
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| |||||||||   |||||||||||||||||| || |||||||||    
T  29615077 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaag 29615024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 52131268 - 52131475
Alignment:
Q  19 gtgttcagtaaaaaggaagaacactgttgaatgattattcaatacaggtgcatccagataagtgtattacgaagactgaattcattgttggcggtgtatc 118  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||| |||||||||| ||| |||||||  |||| |||||| ||| ||| |||||||||    
T  52131268 gtgttcagtaaaacg-aagaacacggttgaatgattattcaatacaagtgcatccaggtaattgtattagcaagattgaatttattattgacggtgtatc 52131366  T
Q  119 tcgcttcgtcttcgaaacttctatcatcggcaagaccatggtcgcttttcacaagaagttaaggaacatgtagcttcacgttgattctcctccatttcct 218  Q
    ||  | ||  |||||| ||||| ||||||| |||||||||||||||| ||||||||||| || ||||||||||| |||||    || |||||||||||||    
T  52131367 tcaatccgatttcgaagcttctgtcatcggtaagaccatggtcgcttctcacaagaagtcaaagaacatgtagcgtcacg----ttatcctccatttcct 52131462  T
Q  219 gtcaatttggtac 231  Q
    |||||||||||||    
T  52131463 gtcaatttggtac 52131475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 12734164 - 12734101
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12734164 tttaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 12734101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 996402 - 996346
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  996402 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 996346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 3206513 - 3206457
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3206513 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 3206457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 37820801 - 37820738
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  37820801 tttaggagggtatattggataatgattctaagggattttaaaagacttttttatcatgaaaaag 37820738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 281 - 347
Target Start/End: Original strand, 20498089 - 20498154
Alignment:
Q  281 aactttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  20498089 aactttaggggggtgtattggatcatgattctaagggattttaaaagac-tttttatcatgaaaaag 20498154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 16010745 - 16010805
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaa 344  Q
    |||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  16010745 tttaggggggtgtattggatcataattctaagggattttaaaagacttttttatcatgaaa 16010805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 19253716 - 19253772
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19253716 gggtttattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 19253772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 33996808 - 33996752
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  33996808 gggtgtattggatcatgattctaagggattttgaaagacttttttatcatgaaaaag 33996752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 29029891 - 29029950
Alignment:
Q  287 aggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  29029891 aggaggatgtattggatcatgattctaagggattttaaaagacttttatatcatgaaaaa 29029950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 22057652 - 22057709
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  22057652 gggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaag 22057709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 10139463 - 10139407
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  10139463 gggtgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaag 10139407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 33808119 - 33808063
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  33808119 gggtgtattgaatcatgattctaagggattttaaaagacttttttatcataaaaaag 33808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 285 - 347
Target Start/End: Original strand, 40246727 - 40246789
Alignment:
Q  285 ttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||| ||||||||||||||||||||||||  |||||||||| ||||||||||| ||||||||    
T  40246727 ttaggggggtgtattggatcatgattctaagagattttaaaaaacttttttatcgtgaaaaag 40246789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 29449177 - 29449122
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||| ||||||||    
T  29449177 gggtgtattagatcatgattataagggattttaaaagacttttttattatgaaaaa 29449122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 51699796 - 51699741
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  51699796 gggtgtattggatcatgattataaaagattttaaaagatttttttatcaagaaaaa 51699741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 6589455 - 6589509
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  6589455 tgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaag 6589509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 290 - 344
Target Start/End: Original strand, 54625480 - 54625534
Alignment:
Q  290 agggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaa 344  Q
    |||||||||||||||||||||||||  ||||||| |||| |||||||||||||||    
T  54625480 agggtgtattggatcatgattctaagagattttagaagatttttttatcatgaaa 54625534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 35337635 - 35337680
Alignment:
Q  302 atcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||    
T  35337635 atcatgattctaagggattttaaaagacttttttattatgaaaaag 35337680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 52114419 - 52114475
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||| |||||||||||||||| | ||||||||||| ||||||||||||| ||||    
T  52114419 gggtgtactggatcatgattctaaggaattttaaaagatttttttatcatgataaag 52114475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 27899277 - 27899328
Alignment:
Q  293 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaa 344  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||    
T  27899277 gtgtattagattatgattctaaatgattttaaaagacttttttattatgaaa 27899328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 23753709 - 23753647
Alignment:
Q  285 ttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||| || |||||||||| | ||||||| |||||||||||||||||||| || |||||||||    
T  23753709 ttagggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaag 23753647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 345
Target Start/End: Original strand, 25418255 - 25418309
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaa 345  Q
    |||| |||||||||||||||||||  |||||||||| | ||||||||||||||||    
T  25418255 gggtttattggatcatgattctaagagattttaaaaaatttttttatcatgaaaa 25418309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 282 - 347
Target Start/End: Original strand, 10660415 - 10660480
Alignment:
Q  282 actttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||| || |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  10660415 actttagggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaag 10660480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 48379050 - 48379103
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| ||||||||| |||||||||||||||||||| || || ||||||    
T  48379050 tgtattggattatgattctataggattttaaaagactttttaattatcaaaaag 48379103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 15494045 - 15493993
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||| || ||||||| ||||||||||||||||||| || ||||||||    
T  15494045 tgtattggattataattctaagggattttaaaagactttttaattatgaaaaa 15493993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 347
Target Start/End: Original strand, 18749460 - 18749515
Alignment:
Q  292 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||| | ||||||| || ||||||||||||||||| || |||||||||    
T  18749460 ggtgtattggattaggattctatagaattttaaaagactttttaattatgaaaaag 18749515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 36674454 - 36674391
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||| || |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  36674454 tttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 36674391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 347
Target Start/End: Original strand, 17946210 - 17946275
Alignment:
Q  281 aactttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||| || |||||||||| | ||||||| ||||||| |||||||||||| || |||||||||    
T  17946210 aactttagggggatgtattggattaggattctataggattt-aaaagactttttaattatgaaaaag 17946275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 1440265 - 1440213
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||| ||||||||||||  |||||||||| || |||||||||||||||||    
T  1440265 tgtattgggtcatgattctaagagattttaaaatac-tttttatcatgaaaaag 1440213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 11431418 - 11431471
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | ||||||| | |||||||||||||||||| || |||||||||    
T  11431418 tgtattggattaggattctataagattttaaaagactttttaattatgaaaaag 11431471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 347
Target Start/End: Complemental strand, 28146320 - 28146287
Alignment:
Q  314 aaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| |||||||||    
T  28146320 aaggattttaaaagacttttttatgatgaaaaag 28146287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 39842743 - 39842690
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  39842743 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 39842690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 401
Target Start/End: Original strand, 9196527 - 9196559
Alignment:
Q  369 ttttattacttatttttgttcacaattccaatt 401  Q
    ||||||| |||||||||||||||||||||||||    
T  9196527 ttttatttcttatttttgttcacaattccaatt 9196559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 311 - 347
Target Start/End: Complemental strand, 44762334 - 44762298
Alignment:
Q  311 ctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||| |||||||||||||||||||||| |||||||||    
T  44762334 ctaagggattttaaaagacttttttataatgaaaaag 44762298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 45927033 - 45926977
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||   |||| ||||||||||||||||||||||| || || ||||||    
T  45927033 gggtgtattggattgagattttaaaggattttaaaagactttttgattataaaaaag 45926977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 50900531 - 50900487
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagactttttt 335  Q
    ||||||||||||| | ||||  |||||||||||||||||||||||    
T  50900531 gggtgtattggattaagatttcaaaggattttaaaagactttttt 50900487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 1e-39; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 5663028 - 5663227
Alignment:
Q  19 gtgttcagtaaaaaggaagaacactgttgaatgattattcaatacaggtgcatccagataagtgtattacgaagactgaattcattgttggcggtgtatc 118  Q
    ||||||| ||||| |||| ||||| ||||||||||||||| ||||| |||||||||| ||| |||||||  |||| |||||||||||||   ||||||||    
T  5663028 gtgttcaataaaacggaaaaacacggttgaatgattattctatacaagtgcatccaggtaattgtattagcaagattgaattcattgtttatggtgtatc 5663127  T
Q  119 tcgcttcgtcttcgaaacttctatcatcggcaagaccatggtcgcttttcacaagaagttaagga-acatgtagcttcacgttgattctcctccatttcc 217  Q
    ||||| || ||||||| ||||| ||| ||| |||||||||||||||| |||||||||||||| || |||| |||||||||    ||||||||||||||||    
T  5663128 tcgctccgacttcgaagcttctgtcaccggtaagaccatggtcgcttctcacaagaagttaaagacacat-tagcttcac----attctcctccatttcc 5663222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 24502093 - 24502031
Alignment:
Q  285 ttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24502093 ttaggggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 24502031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 7507217 - 7507159
Alignment:
Q  289 gagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7507217 gagggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 7507159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 23115484 - 23115428
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23115484 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 23115428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 24214907 - 24214851
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24214907 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcataaaaaag 24214851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 42735593 - 42735537
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42735593 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 42735537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 42937246 - 42937306
Alignment:
Q  287 aggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  42937246 aggagggtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaag 42937306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 41478989 - 41479043
Alignment:
Q  293 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41478989 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 41479043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 26374741 - 26374688
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26374741 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 26374688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 2705135 - 2705079
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  2705135 gggtgtattggatcatgattgtaaaggattttaaaagatttttttatcatgaaaaag 2705079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 26373694 - 26373751
Alignment:
Q  291 gggtgtattgg-atcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  26373694 gggtgtattgggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 26373751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 32711598 - 32711542
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||||||||||||    
T  32711598 gggtgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaag 32711542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 43959549 - 43959604
Alignment:
Q  293 gtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 347  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||    
T  43959549 gtgtatttgatcatgattttaaaggattttaaaagactttttttatcatgaaaaag 43959604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 5576937 - 5576884
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaa 344  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||| ||||||||    
T  5576937 gggtgtattggattatgattctaagggattttaaaagatttttttgtcatgaaa 5576884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 42938435 - 42938377
Alignment:
Q  289 gagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||| |||||||| || ||| ||| ||||||||||||||||||||| ||||||||||    
T  42938435 gagggtttattggattataattttaagggattttaaaagacttttttaccatgaaaaag 42938377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 8543409 - 8543466
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaaga-cttttttatcatgaaaaag 347  Q
    ||||||||| |||||||||||||| |||||||||||||  ||||||||||| ||||||    
T  8543409 gggtgtattagatcatgattctaagggattttaaaagattttttttatcataaaaaag 8543466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 32497376 - 32497429
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | |||||||  ||||||||||||||||||| ||||||||||||    
T  32497376 tgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaag 32497429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 14782457 - 14782395
Alignment:
Q  285 ttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||| || |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  14782457 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 14782395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 44726132 - 44726070
Alignment:
Q  285 ttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||| || |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  44726132 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 44726070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 2112786 - 2112835
Alignment:
Q  286 taggagggtgtattggatcatgattctaaaggattttaaaagactttttt 335  Q
    ||||||||||||||||||   ||||  |||||||||||||||||||||||    
T  2112786 taggagggtgtattggattgagatttcaaaggattttaaaagactttttt 2112835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 4031571 - 4031518
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  4031571 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 4031518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 9288763 - 9288710
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| |||||||||   |||||||||||||||||| || |||||||||    
T  9288763 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaag 9288710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 39190084 - 39190035
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaa 343  Q
    |||||||||| | |||||||| ||||||||||||||||||| || |||||    
T  39190084 tgtattggattaggattctaagggattttaaaagactttttaattatgaa 39190035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 29260360 - 29260316
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagactttttt 335  Q
    |||||||||||||   |||| ||||||||||||||||||||||||    
T  29260360 gggtgtattggattgagattttaaaggattttaaaagactttttt 29260316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 24131293 - 24131233
Alignment:
Q  287 aggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24131293 aggagggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 24131233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 22201904 - 22201960
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22201904 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 22201960  T

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Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 25331020 - 25331076
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25331020 gggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaag 25331076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 1044692 - 1044755
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  1044692 tttaggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaag 1044755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 28541580 - 28541643
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  28541580 tttaggagggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaag 28541643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 7250096 - 7250035
Alignment:
Q  285 ttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  7250096 ttagaagggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaa 7250035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 31315043 - 31314989
Alignment:
Q  293 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  31315043 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaag 31314989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 346
Target Start/End: Complemental strand, 46635959 - 46635905
Alignment:
Q  292 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  46635959 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaa 46635905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 42786656 - 42786713
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  42786656 gggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaag 42786713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 25445979 - 25446038
Alignment:
Q  287 aggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  25445979 aggagggtgtattggat-atgattttaagggattttaaaagacttttttatcatgaaaaag 25446038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 30009994 - 30009938
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  30009994 gggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaag 30009938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 41320639 - 41320695
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  41320639 gggtgtattggatcatgattctaaaagattttaaaagatttttttattatgaaaaag 41320695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 55302725 - 55302788
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||| |||||||||    
T  55302725 tttaggagggtgtattgaatcatgattttaagggattttagaagacttttttataatgaaaaag 55302788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 41881401 - 41881344
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagactt-ttttatcatgaaaaag 347  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||    
T  41881401 gggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaag 41881344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 25504959 - 25504900
Alignment:
Q  287 aggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||    
T  25504959 aggagggtgtattggatcagg-ttctaatggattttaaaatacttttttatcatgaaaaag 25504900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 40537462 - 40537406
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||||| ||||||    
T  40537462 gggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaag 40537406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 32951144 - 32951097
Alignment:
Q  300 ggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  32951144 ggatcatgattctaagggattttaaaagacttttttataatgaaaaag 32951097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 347
Target Start/End: Original strand, 1112784 - 1112838
Alignment:
Q  292 ggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  1112784 ggtgtattggatcatgattctaa--gattttaaaagactttttttatcatgaaaaag 1112838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 7007258 - 7007318
Alignment:
Q  287 aggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||| |||| ||||||||| ||| ||||||||| |||||||||||| |||||||||    
T  7007258 aggagggtggattgaatcatgattttaagggattttaatagacttttttataatgaaaaag 7007318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 37046769 - 37046713
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||||| ||||||    
T  37046769 gggtgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaag 37046713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 37915674 - 37915730
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| || |||||||||    
T  37915674 gggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaag 37915730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 39479674 - 39479618
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||| |||   ||||||||||||||||||||||| ||||||    
T  39479674 gggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaag 39479618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 44775986 - 44775947
Alignment:
Q  295 gtattggatcatgattctaaaggattttaaaagacttttt 334  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  44775986 gtattggatcatgattctaatggattttaaaagacttttt 44775947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 34228880 - 34228843
Alignment:
Q  310 tctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  34228880 tctaagggattttaaaagacttttttatcatgaaaaag 34228843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 53275727 - 53275780
Alignment:
Q  293 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||||||||||||||| | ||||||||| |  ||||||||||||||||    
T  53275727 gtgtattggatcatgattctaaggaattttaaaaaatatttttatcatgaaaaa 53275780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 346
Target Start/End: Complemental strand, 19741213 - 19741170
Alignment:
Q  302 atcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||||||| |||||||||||||| |||||||||||||||    
T  19741213 atcatgattctaaaagattttaaaagact-ttttatcatgaaaaa 19741170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 27454408 - 27454352
Alignment:
Q  290 agggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    ||||| ||||||||||||||| ||| | ||||||||||||| |||||| ||||||||    
T  27454408 agggtatattggatcatgattttaaggaattttaaaagactgttttataatgaaaaa 27454352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 27767937 - 27768001
Alignment:
Q  283 ctttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||| || |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  27767937 ctttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 27768001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 49469210 - 49469254
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagactttttt 335  Q
    ||||||||||||||||||||| || | ||||||||||||||||||    
T  49469210 gggtgtattggatcatgattccaaggaattttaaaagactttttt 49469254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 5441286 - 5441349
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||| || |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  5441286 tttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 5441349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 347
Target Start/End: Original strand, 20021223 - 20021289
Alignment:
Q  281 aactttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||| ||| || |||||||||| || ||| ||| ||||||||||||||||||| || |||||||||    
T  20021223 aacttaagggggatgtattggattataattttaagggattttaaaagactttttaattatgaaaaag 20021289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 28847183 - 28847130
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||   |||| |||||||||||||||||||||||||| || ||||||    
T  28847183 tgtattggattgagattttaaaggattttaaaagacttttttataataaaaaag 28847130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 54341036 - 54341089
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  54341036 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 54341089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 23464845 - 23464900
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaaga--cttttttatcatgaaaaag 347  Q
    |||||||||| |||||||||| | |||||||||||   ||||||||||||||||||    
T  23464845 tgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaag 23464900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 49835126 - 49835074
Alignment:
Q  295 gtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 49835074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 22183253 - 22183309
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22183253 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 22183309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 28824697 - 28824633
Alignment:
Q  282 actttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28824697 actttagg-gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 28824633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 953702 - 953758
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  953702 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 953758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 6304571 - 6304515
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6304571 gggtgtattggatcatgattctaaaggattttaaaagacttttttttcatgaaaaag 6304515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 19452167 - 19452111
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19452167 gggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaag 19452111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 21222031 - 21222087
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21222031 gggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaag 21222087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 35279555 - 35279611
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  35279555 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaag 35279611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 45760327 - 45760271
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  45760327 gggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaag 45760271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 49198584 - 49198528
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  49198584 gggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaag 49198528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 35679452 - 35679389
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| |||||||||    
T  35679452 tttaggagggtgtattgaatcatgattttaagggattttaaaagacttttttataatgaaaaag 35679389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 47780495 - 47780558
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||    
T  47780495 tttaggagggtgtattggatcatgattctaagaaattttaaaagatttttttatcatgaaaaag 47780558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 730032 - 730087
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  730032 gggtgtattggatcatgattctaagggattttaaaagactttttt-tcatgaaaaag 730087  T

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Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 49417967 - 49418023
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  49417967 gggtatattggatcatgattctaagagattttaaaagacttttttatcatgaaaaag 49418023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 33025395 - 33025450
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  33025395 gggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaa 33025450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 47654669 - 47654614
Alignment:
Q  293 gtgtattggatcatgattctaaaggattttaaaagactt-ttttatcatgaaaaag 347  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  47654669 gtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaag 47654614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 50192874 - 50192812
Alignment:
Q  285 ttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||| |||||||||| ||||||||||||| | |||||||||||||||||||| |||||||||    
T  50192874 ttaggggggtgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaag 50192812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 28541387 - 28541437
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 341  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  28541387 gggtgtattggatcatgattctaagcgattttaaaagatttttttatcatg 28541437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 301 - 347
Target Start/End: Complemental strand, 31572470 - 31572424
Alignment:
Q  301 gatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  31572470 gatcatgattctaagggattttaagagacttttttatcatgaaaaag 31572424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 14494095 - 14494147
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||||||||||||||||| ||   ||||||||||||||||||||||||||    
T  14494095 gggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaa 14494147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 32589278 - 32589215
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||| || |||||||||| |||||||||   |||||||||| ||||||||||||||||||||    
T  32589278 tttagggggatgtattggattatgattctatgagattttaaaaaacttttttatcatgaaaaag 32589215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 6312450 - 6312513
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||| || |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  6312450 tttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 6312513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 48524208 - 48524258
Alignment:
Q  296 tattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||| | |||||||||||| |||||||||| ||||||    
T  48524208 tattggatcatgattctaaggaattttaaaagac-tttttatcataaaaaag 48524258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 9322823 - 9322761
Alignment:
Q  285 ttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||| || |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  9322823 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 9322761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 9577746 - 9577693
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | ||||| || ||||||||||||||||||| || |||||||||    
T  9577746 tgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaag 9577693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 15835367 - 15835314
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  15835367 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 15835314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 346
Target Start/End: Complemental strand, 25831213 - 25831168
Alignment:
Q  301 gatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||||||| | ||||||||||||||||| || ||||||||    
T  25831213 gatcatgattctaaggaattttaaaagactttttaattatgaaaaa 25831168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 336
Target Start/End: Original strand, 34772311 - 34772356
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagactttttta 336  Q
    |||||||||||||  |||||  ||||||||||||||||||||||||    
T  34772311 gggtgtattggattgtgatttcaaaggattttaaaagactttttta 34772356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 25612043 - 25612095
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||| | |||||||  ||||||||||||||||||| || ||||||||    
T  25612043 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaa 25612095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 45272473 - 45272525
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||| | |||||||  ||||||||||||||||||| || ||||||||    
T  45272473 tgtattggattaagattctatgggattttaaaagactttttaattatgaaaaa 45272525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 6e-23; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 21146950 - 21147013
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21146950 tttaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 21147013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 7017013 - 7016957
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7017013 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 7016957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 33656366 - 33656303
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||    
T  33656366 tttaggagggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaag 33656303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 27459266 - 27459209
Alignment:
Q  290 agggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  27459266 agggtgtattggatcatgattctaacggattttaaaaaacttttttatcatgaaaaag 27459209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 43319129 - 43319193
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 347  Q
    |||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  43319129 tttaggggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaag 43319193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 5273276 - 5273223
Alignment:
Q  293 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  5273276 gtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaa 5273223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 6460678 - 6460738
Alignment:
Q  287 aggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||    
T  6460678 aggagggtgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaag 6460738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 16894174 - 16894121
Alignment:
Q  292 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaa 345  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  16894174 ggtgtattggatcataattctaagggattttaaaagacttttttatcataaaaa 16894121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 32158215 - 32158159
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||    
T  32158215 gggtatattgaatcatgattctaaggaattttaaaagacttttttatcatgaaaaag 32158159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 7948630 - 7948577
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | ||||||| ||||||||||||||||||||||| |||||||||    
T  7948630 tgtattggattaggattctataggattttaaaagacttttttattatgaaaaag 7948577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 14000428 - 14000365
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||| || |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  14000428 tttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 14000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 4550579 - 4550517
Alignment:
Q  285 ttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||| || |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  4550579 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 4550517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 9689553 - 9689606
Alignment:
Q  293 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||| |||||||||| ||||||||| |||| ||||||| |||||||||    
T  9689553 gtgtattggattatgattctaagggattttaatagac-tttttattatgaaaaag 9689606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 22746190 - 22746243
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | ||||||| || ||||||||||||||||| || |||||||||    
T  22746190 tgtattggattaggattctatagaattttaaaagactttttaattatgaaaaag 22746243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 27786209 - 27786266
Alignment:
Q  290 agggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||| | ||||  || |||||||||||||||||||||| || ||||||    
T  27786209 agggtgtattggattaagatttcaagggattttaaaagacttttttattataaaaaag 27786266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 37013807 - 37013860
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| |||||||||   |||||||||||||||||| || |||||||||    
T  37013807 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaag 37013860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 347
Target Start/End: Original strand, 1391507 - 1391569
Alignment:
Q  285 ttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1391507 ttaggtgggtgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaag 1391569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 2301054 - 2300998
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2301054 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 2300998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 6197801 - 6197738
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  6197801 tttaggggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaag 6197738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 29076486 - 29076543
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  29076486 gggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaag 29076543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 29111459 - 29111516
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  29111459 gggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaag 29111516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 7051750 - 7051790
Alignment:
Q  307 gattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  7051750 gattctaagagattttaaaagacttttttatcatgaaaaag 7051790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 285 - 347
Target Start/End: Original strand, 31895579 - 31895641
Alignment:
Q  285 ttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||| || |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  31895579 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 31895641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 14262746 - 14262694
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||| | |||||||  ||||||||||||||||||| || ||||||||    
T  14262746 tgtattggattaggattctacgggattttaaaagactttttaattatgaaaaa 14262694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 39170 - 39114
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39170 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaag 39114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 100101 - 100157
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  100101 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 100157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 4e-21; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 22552082 - 22552026
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22552082 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 22552026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 24776246 - 24776302
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24776246 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 24776302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 31170943 - 31170887
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31170943 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 31170887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 9120059 - 9120114
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9120059 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaa 9120114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 292 - 347
Target Start/End: Complemental strand, 14198894 - 14198839
Alignment:
Q  292 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14198894 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 14198839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 292 - 347
Target Start/End: Original strand, 44765667 - 44765722
Alignment:
Q  292 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44765667 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 44765722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 12407271 - 12407327
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  12407271 gggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaag 12407327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 16269582 - 16269638
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  16269582 gggtgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaag 16269638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 20605043 - 20605099
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  20605043 gggtgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaag 20605099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 26601519 - 26601463
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||    
T  26601519 gggtgtattggatcatgtttctaaaggattttaaaagacttttttattattaaaaag 26601463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 35316953 - 35317009
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  35316953 gggtgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaag 35317009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 1789326 - 1789389
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||| ||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||||    
T  1789326 tttaggggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaag 1789389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 305786 - 305729
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagactt-ttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  305786 gggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaag 305729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 378873 - 378926
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||| ||| ||||||||||||||||||| || |||||||||    
T  378873 tgtattggatcatgattataagggattttaaaagactttttaattatgaaaaag 378926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 43847537 - 43847593
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||| |||||||  ||||| ||||||||||||||||||||||| ||||||||    
T  43847537 gggtgtattagatcatgtatctaagggattttaaaagacttttttatcgtgaaaaag 43847593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 43078559 - 43078622
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  43078559 tttaggaggatgtattggattaggattctatgggattttaaaagactttttgattatgaaaaag 43078622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 14920665 - 14920619
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttat 337  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||    
T  14920665 gggtgtattggattgtgattttaaaggattttaaaagacttttttat 14920619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 32125152 - 32125197
Alignment:
Q  302 atcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||||    
T  32125152 atcatgattttaagggattttaaaagacttttttataatgaaaaag 32125197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 33135517 - 33135570
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||||||||    
T  33135517 tgtattggattaggattctataggattttaaaagactttttaattatgaaaaag 33135570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 19144915 - 19144971
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||  |||||||||| ||||||||||| | ||||||||||| ||||||    
T  19144915 gggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaag 19144971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 330
Target Start/End: Complemental strand, 5093352 - 5093317
Alignment:
Q  295 gtattggatcatgattctaaaggattttaaaagact 330  Q
    |||||||||||||||||||| |||||||||||||||    
T  5093352 gtattggatcatgattctaagggattttaaaagact 5093317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 347
Target Start/End: Original strand, 21987313 - 21987347
Alignment:
Q  313 aaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||| |||||||||    
T  21987313 aaaggattttaaaagacttttttatgatgaaaaag 21987347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 26788678 - 26788731
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  26788678 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 26788731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 28844449 - 28844502
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  28844449 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 28844502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 401
Target Start/End: Complemental strand, 38951849 - 38951797
Alignment:
Q  348 acagtaagattttagggtggtttttattacttatttttgttcacaattccaatt 401  Q
    ||||||||| |||||||  ||||| ||| |||||||||||||||||||||||||    
T  38951849 acagtaagaatttaggggagtttt-atttcttatttttgttcacaattccaatt 38951797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 3463565 - 3463617
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||| |||||||||   |||||||||||||||||| || ||||||||    
T  3463565 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaa 3463617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 28740598 - 28740546
Alignment:
Q  295 gtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 28740546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 29940941 - 29940989
Alignment:
Q  287 aggagggtgtattggatcatgattctaaaggattttaaaagactttttt 335  Q
    |||||||||||||||||   ||||  |||||||||||||||||||||||    
T  29940941 aggagggtgtattggattgagatttcaaaggattttaaaagactttttt 29940989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 8654 - 8708
Alignment:
Q  293 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  8654 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaag 8708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 38838 - 38781
Alignment:
Q  290 agggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  38838 agggtgtattggatcatgattctaagggattttaaaagatatttttatcatgaaaaag 38781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 102026 - 102072
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttat 337  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  102026 gggtgtattagatcatgattctaagggattttaaaagacttttttat 102072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 15347 - 15295
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||||||||||||||||| ||   ||||||||||||||||||||||||||    
T  15347 gggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaa 15295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 15990 - 15938
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||||||||||||||||| ||   ||||||||||||||||||||||||||    
T  15990 gggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaa 15938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 4083 - 4146
Alignment:
Q  284 tttaggagggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||| || |||||||||| | ||||||| |||||||||||||||||||| ||  ||||||||    
T  4083 tttagggggatgtattggattaggattctataggattttaaaagactttttaattttgaaaaag 4146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 10453 - 10506
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  10453 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 10506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 12087 - 12034
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 347  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  12087 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 12034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 756 - 808
Alignment:
Q  294 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 346  Q
    |||||||||| | |||||||  ||||||||||||||||||| || ||||||||    
T  756 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaa 808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 81866 - 81822
Alignment:
Q  291 gggtgtattggatcatgattctaaaggattttaaaagactttttt 335  Q
    |||||||||||||   |||| ||||||||||||||||||||||||    
T  81866 gggtgtattggattgagattttaaaggattttaaaagactttttt 81822  T

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