View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17998_high_31 (Length: 219)
Name: NF17998_high_31
Description: NF17998
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17998_high_31 |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 31746327 - 31746132
Alignment:
| Q |
11 |
aagaatataatatgttatctttggttccttttgaactcgtgtgagcatagaaataaagatgaggacggtgaaaagtgagttagatcaacggcattcatat |
110 |
Q |
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| T |
31746327 |
aagaatacaatatgttatctttggttccttttgaactcgtgtgagcatagaaataaagatgaggacggtgaaaagtgagtcagatcaacggcattcatat |
31746228 |
T |
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| Q |
111 |
ttccacttgtttccaccctattgtctcacctttaataaatttttattccaaacttcccctgaccatacctatatattcatcacccttgaccatttt |
206 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31746227 |
ttccacttgtttccaccctattgtctcacctttattaaatttttattcccaacttcccctgaccatacctatatattcatcacccttgaccatttt |
31746132 |
T |
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