View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17998_high_5 (Length: 534)
Name: NF17998_high_5
Description: NF17998
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17998_high_5 |
 | |
|
| [»] scaffold0855 (1 HSPs) |
| | |
|
| [»] scaffold0847 (1 HSPs) |
| | |
|
| [»] scaffold0014 (1 HSPs) |
| | |
|
| [»] scaffold0001 (2 HSPs) |
| | |
|
| [»] scaffold0088 (1 HSPs) |
| | |
|
| [»] scaffold0102 (1 HSPs) |
| | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 310; Significance: 1e-174; HSPs: 17)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 12 - 357
Target Start/End: Original strand, 8235632 - 8235972
Alignment:
| Q |
12 |
atgaacgacaactagatggaggtgaggtgagcaatgccagccagagtgtggaaacaagtcaatgtgggtggagaagtcccggcccgaagagggagatcag |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8235632 |
atgaacgacaactagatggaggtgaggtgagcaatgccagccagagtgtggaaacaagtcaatgtgggtggagaagtcccg-----aagagggagatcag |
8235726 |
T |
|
| Q |
112 |
gtgataagccgtagttttaactgcttttagcattttaattcaataaagtcttcttagttttagtcgtatttcttgagttattttactacaaaaactttgg |
211 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
8235727 |
gtgataagccgtagttttaactgcttttggcattttaattcaataaagtcttcttggttttagtcgtatttcttgagttattttactacaaaaactgtgg |
8235826 |
T |
|
| Q |
212 |
ttttcgtttcaggttgaatatgaaagaagcaagatggtttggatgaagtttggacaagaaaagataaaagaatgcatgaagaaaagggtttttccaggga |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8235827 |
ttttcgtttcaggttgaatatgaaagaagcaagatggtttggatgaagtttggacaagaaaagataaaagaatgcatgaagaaaagggtttttccaggga |
8235926 |
T |
|
| Q |
312 |
gaaacacacgctccgtgcgttttaagcacccagaccgtgcgtttta |
357 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
8235927 |
gaaacacacgctccgtgcgttttaagcacccagaccgtgtgtttta |
8235972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 373 - 520
Target Start/End: Original strand, 8236485 - 8236632
Alignment:
| Q |
373 |
taatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaagg |
472 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8236485 |
taatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaatgtgaagtttaatagttgttatttcatcatctcatatatcaaacaaagg |
8236584 |
T |
|
| Q |
473 |
atcgaaagataagtttgatattggaattagacaagacgacacaaaact |
520 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8236585 |
atcgaaagataagtttgatattggaattagacaagacgacacaaaact |
8236632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 369 - 498
Target Start/End: Original strand, 15421331 - 15421461
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
||||||||||||| |||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
15421331 |
aatctaatttcatcgttttcaaactcagtaacaagtattaaacgaaggaccgaaaggtgaagtttaatagttgttatttcatcatctcaaatatgaaacg |
15421430 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |
|
|
| T |
15421431 |
aaggatcgaaagatgaagtttgatattggaa |
15421461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 369 - 498
Target Start/End: Complemental strand, 16527508 - 16527378
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
16527508 |
aatctaatttcattgttttcaaactcaataacaagtattaaacgaaggaccgaaaggtgaagtttaataattgttatttcatcatctcaaatatcaaacg |
16527409 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
|| ||||||||||| ||||||||| |||||| |
|
|
| T |
16527408 |
aatgatcgaaagatgaagtttgattttggaa |
16527378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 369 - 498
Target Start/End: Original strand, 2130180 - 2130310
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
||||||||||| | |||||||||||| || || ||||||||||| |||||||| |||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
2130180 |
aatctaatttcgtcgttttcaaactcagcaataagtattaaacgaaggaccgaaatgtgaagtttaatagttgttagttcatcatctcaaatatcaaacg |
2130279 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |
|
|
| T |
2130280 |
aaggatcgaaagatgaagtttgatattggaa |
2130310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 369 - 498
Target Start/End: Complemental strand, 12727058 - 12726928
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
|||||||| | ||| |||| |||| || |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | || ||||| |
|
|
| T |
12727058 |
aatctaatcttattgtttttaaacccagtaacaagtattaaacgaaagaccgaaaggtatagtttaatagttgttatttcatcatctcaaacattaaaca |
12726959 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
||||| ||||| || |||||||||||||||| |
|
|
| T |
12726958 |
aaggaccgaaaaatgaagtttgatattggaa |
12726928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 113 - 272
Target Start/End: Complemental strand, 3363675 - 3363517
Alignment:
| Q |
113 |
tgataagccgtagttttaactgcttttagcattttaattcaataaagtcttct-tagttttagtcgtatttcttgagttattttactacaaaaactttgg |
211 |
Q |
| |
|
||||||| |||||||||| || |||| ||||||||||||||||| || || |||||| |||||||||||||||| ||||||||||||||| ||| || |
|
|
| T |
3363675 |
tgataagtcgtagttttat-tgtttttggcattttaattcaataatgtttttgctagttt-agtcgtatttcttgagctattttactacaaaagcttggg |
3363578 |
T |
|
| Q |
212 |
ttttcgtttcaggttgaatatgaaagaagcaagatggtttggatgaagtttggacaagaaa |
272 |
Q |
| |
|
|||||||||||||||| || ||||||||| || ||||||| | ||||||| ||||||| |
|
|
| T |
3363577 |
ttttcgtttcaggttggtaatcaaagaagcatgaaggtttggttcaagtttgagcaagaaa |
3363517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 396 - 495
Target Start/End: Original strand, 28553549 - 28553650
Alignment:
| Q |
396 |
ataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatc--atctcatatatcaaacaaaggatcgaaagat-aagtttgata |
492 |
Q |
| |
|
||||||||||| ||||||| || ||||||||||||||| ||| ||||||||||||| |||||| ||||||||| ||||| |||||| | |||||||||| |
|
|
| T |
28553549 |
ataacaaatatcaaacgaaggatcgaaaggtgaagtttgata-ttgttatttcatcatatctcaaatatcaaacgaaggaccgaaaggtgaagtttgata |
28553647 |
T |
|
| Q |
493 |
ttg |
495 |
Q |
| |
|
||| |
|
|
| T |
28553648 |
ttg |
28553650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 498
Target Start/End: Complemental strand, 20860525 - 20860418
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aag-tttga |
490 |
Q |
| |
|
|||||||||| |||||| |||| | |||||| ||||||||||||||||||||| | ||| |||||||||| | |||||||||||||| ||| ||||| |
|
|
| T |
20860525 |
tcaataacaagtattaatcgaagaatcgaaagatgaagtttaatagttgttattgattaatcacatatatcaagcgaaggatcgaaagatgaagttttga |
20860426 |
T |
|
| Q |
491 |
tattggaa |
498 |
Q |
| |
|
|||||||| |
|
|
| T |
20860425 |
tattggaa |
20860418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 481
Target Start/End: Complemental strand, 20898483 - 20898395
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaaga |
481 |
Q |
| |
|
|||||||||| |||||| ||| || | |||| ||||||||||||||||||||| ||||| || ||||||| ||||||||||||||| |
|
|
| T |
20898483 |
tcaataacaagtattaatcgatggatcaaaagatgaagtttaatagttgttattaattcatcacaaatatcaagcaaaggatcgaaaga |
20898395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 482
Target Start/End: Complemental strand, 15346668 - 15346590
Alignment:
| Q |
404 |
tattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
||||||| ||| |||| || |||| |||||||||||||||||||||||||||| ||| || | |||||||||||||| |
|
|
| T |
15346668 |
tattaaaagaaggacccgaatgtgatgtttaatagttgttatttcatcatctcaaatactaaccgaaggatcgaaagat |
15346590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 482
Target Start/End: Original strand, 26194496 - 26194581
Alignment:
| Q |
397 |
taacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
|||||| |||||| ||| |||||||||| |||||||||| ||| ||| ||||| ||| || ||||||| | |||||||||||||| |
|
|
| T |
26194496 |
taacaagtattaatcgatggaccgaaaggcgaagtttaatggtttttaattcataatcacaaatatcaagcgaaggatcgaaagat |
26194581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 498
Target Start/End: Original strand, 20448665 - 20448772
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aag-tttga |
490 |
Q |
| |
|
|||||||| | |||||| ||||||| ||||| ||||||||||||||||||||| | ||| || ||||||| |||||||||||||| ||| ||||| |
|
|
| T |
20448665 |
tcaataaccagtattaatcgaatgattgaaagatgaagtttaatagttgttattgattaatcacaaatatcaagtgaaggatcgaaagatgaagttttga |
20448764 |
T |
|
| Q |
491 |
tattggaa |
498 |
Q |
| |
|
|||||||| |
|
|
| T |
20448765 |
tattggaa |
20448772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 498
Target Start/End: Original strand, 20534431 - 20534538
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aag-tttga |
490 |
Q |
| |
|
|||||||| | |||||| ||||||| ||||| ||||||||||||||||||||| | ||| || ||||||| |||||||||||||| ||| ||||| |
|
|
| T |
20534431 |
tcaataaccagtattaatcgaatgattgaaagatgaagtttaatagttgttattgattaatcacaaatatcaagtgaaggatcgaaagatgaagttttga |
20534530 |
T |
|
| Q |
491 |
tattggaa |
498 |
Q |
| |
|
|||||||| |
|
|
| T |
20534531 |
tattggaa |
20534538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 27317954 - 27318032
Alignment:
| Q |
136 |
ttttagcattttaattcaataaagtcttcttagttttagtcgtatttcttgagttattttactacaaaaactttggtttt |
215 |
Q |
| |
|
||||||||||| ||||||||||||| || ||||||||| || || || | ||| |||||||||||||| | ||||||||| |
|
|
| T |
27317954 |
ttttagcatttaaattcaataaagtattgttagttttaatcctagtt-tagagctattttactacaaataatttggtttt |
27318032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 23299146 - 23299199
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
|||||||||| |||||| ||| || |||||| ||||||||||||||||||||| |
|
|
| T |
23299146 |
tcaataacaagtattaatcgatggatcgaaagatgaagtttaatagttgttatt |
23299199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 52755181 - 52755128
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
|||||||||| |||||| |||| || |||||| | ||||||||||||||||||| |
|
|
| T |
52755181 |
tcaataacaagtattaatcgaaggatcgaaagattaagtttaatagttgttatt |
52755128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 147; Significance: 3e-77; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 113 - 356
Target Start/End: Original strand, 21276326 - 21276571
Alignment:
| Q |
113 |
tgataagccgtagttttaactgcttttagcattttaattcaataaagtcttcttagttttagtcgtatttcttgagttattttactacaaaaactttggt |
212 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||| || ||||||||||||| | |||| |
|
|
| T |
21276326 |
tgataagtcgtagttttaactgcttttggcattttaattcaataaagtcttgttagttatagtcgtatttcttgagctaatttactacaaaaattgtggt |
21276425 |
T |
|
| Q |
213 |
tttcgtttcaggttgaatatgaaagaagcaagatggtttggatgaagtttggacaagaaaagat--aaaagaatgcatgaagaaaagggtttttccaggg |
310 |
Q |
| |
|
||| |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| |||||||||| |
|
|
| T |
21276426 |
ttttgtttcaggttgaatatcaaagaagcgagatggtttggatgaagtttggataagaaaagataaaaaaaaatgcatgaagaaaaggggttttccaggg |
21276525 |
T |
|
| Q |
311 |
agaaacacacgctccgtgcgttttaagcacccagaccgtgcgtttt |
356 |
Q |
| |
|
||||| |||| || || |||||||||||| ||| |||||||||| |
|
|
| T |
21276526 |
agaaaagcacggtctgtttgttttaagcacctagatcgtgcgtttt |
21276571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 369 - 498
Target Start/End: Original strand, 24493177 - 24493307
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
24493177 |
aatctaatttcattgttttcaaattcaataacaagtattaaacgaaggaccgaaaggcgaagtttaatagttgttatttcatcatctcaaatatcaaacg |
24493276 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
|||||| ||||||| |||||||||||||||| |
|
|
| T |
24493277 |
aaggattgaaagatgaagtttgatattggaa |
24493307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 369 - 498
Target Start/End: Original strand, 21276855 - 21276985
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
21276855 |
aatctaaattcatcgttttcaaactcaataacaagtattaaacgaaggaccgaaatgtgaagtttaatagttgttatttcatcatctcaaatatcaaacg |
21276954 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
||||||||||| || |||||||||||||||| |
|
|
| T |
21276955 |
aaggatcgaaaaatgaagtttgatattggaa |
21276985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 369 - 499
Target Start/End: Original strand, 17465072 - 17465203
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||| |||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
17465072 |
aatctaatttcatcgttttcaaactcaataacaagtatttaacgaagtaccaaaaggtgaagtttaatagttgttatttcatcatctcaaatatcaaatg |
17465171 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaat |
499 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||| |
|
|
| T |
17465172 |
aaggattgaaagatgaagtttgatattggaat |
17465203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 397 - 498
Target Start/End: Original strand, 4743044 - 4743146
Alignment:
| Q |
397 |
taacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatattg |
495 |
Q |
| |
|
|||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||||||||||||| |
|
|
| T |
4743044 |
taacaagtatcaaacgaaggaccgaaaagtgaagtttaatagttgttatttcatcatctcaaatatcaaacgaaggatcaaaagatgaagtttgatattg |
4743143 |
T |
|
| Q |
496 |
gaa |
498 |
Q |
| |
|
||| |
|
|
| T |
4743144 |
gaa |
4743146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 17169046 - 17169151
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| ||||||||||||||| ||||||||||||||||||||||| || ||||||| | |||||||||||||| ||||||||||| |
|
|
| T |
17169046 |
aataacaagtattaatcgaaggaccgaaaggtgaagcttaatagttgttatttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatat |
17169145 |
T |
|
| Q |
494 |
tggaat |
499 |
Q |
| |
|
|||||| |
|
|
| T |
17169146 |
tggaat |
17169151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 17174606 - 17174711
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| ||||||||||||||| ||||||||||||||||||||||| || ||||||| | |||||||||||||| ||||||||||| |
|
|
| T |
17174606 |
aataacaagtattaatcgaaggaccgaaaggtgaagcttaatagttgttatttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatat |
17174705 |
T |
|
| Q |
494 |
tggaat |
499 |
Q |
| |
|
|||||| |
|
|
| T |
17174706 |
tggaat |
17174711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 482
Target Start/End: Complemental strand, 9717591 - 9717504
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
|||||||| |||||| |||| || |||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||| |
|
|
| T |
9717591 |
aataacaagtattaatcgaaggaacgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaagtatcgaaagat |
9717504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 369 - 444
Target Start/End: Original strand, 55267813 - 55267888
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgtta |
444 |
Q |
| |
|
||||||||||||| |||||||||||| |||||| ||||||||||| |||||||| ||||||||| |||||||||| |
|
|
| T |
55267813 |
aatctaatttcatcgttttcaaactcagtaacaagtattaaacgaaggaccgaaatgtgaagtttgatagttgtta |
55267888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 436 - 498
Target Start/End: Original strand, 55268073 - 55268136
Alignment:
| Q |
436 |
tagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
55268073 |
tagttgttatttcatcatctcaaatatcaaacgaaggatcgaaagatgaagtttgatattggaa |
55268136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 10731394 - 10731447
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
||||||||||||||||| |||| || |||||| ||||||||||||||||||||| |
|
|
| T |
10731394 |
tcaataacaaatattaatcgaacgatcgaaagatgaagtttaatagttgttatt |
10731447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 10945163 - 10945216
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
||||||||||||||||| |||| || |||||| ||||||||||||||||||||| |
|
|
| T |
10945163 |
tcaataacaaatattaatcgaacgatcgaaagatgaagtttaatagttgttatt |
10945216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 11902457 - 11902368
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
|||||||||| |||||| |||| || |||||| ||||||||||||||||||||| ||||| || |||| || | |||||||||||||| |
|
|
| T |
11902457 |
tcaataacaagtattaatcgaaggatcgaaagatgaagtttaatagttgttattgattcatcacaaatattaagcgaaggatcgaaagat |
11902368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 498
Target Start/End: Complemental strand, 11377395 - 11377280
Alignment:
| Q |
384 |
ttttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat- |
482 |
Q |
| |
|
|||| ||| ||||||| || |||| ||||| |||||||||||||||| |||| | |||||||||||||| | ||||||||| | |||||||||||| |
|
|
| T |
11377395 |
tttttaaattcaataaaaagtattgaacgatggaccgaaaggtgaagtccaataactattatttcatcatctgaaatatcaaacgatggatcgaaagatg |
11377296 |
T |
|
| Q |
483 |
aagtttgatattggaa |
498 |
Q |
| |
|
|| |||||| |||||| |
|
|
| T |
11377295 |
aattttgatgttggaa |
11377280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 9857463 - 9857516
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
|||||||||| |||||| |||| || |||||| ||||||||||||||||||||| |
|
|
| T |
9857463 |
tcaataacaagtattaatcgaaggatcgaaagatgaagtttaatagttgttatt |
9857516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 16953742 - 16953689
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
|||||||||| |||||| |||| || |||||| ||||||||||||||||||||| |
|
|
| T |
16953742 |
tcaataacaagtattaatcgaaagatcgaaagatgaagtttaatagttgttatt |
16953689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 29367280 - 29367353
Alignment:
| Q |
384 |
ttttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctca |
457 |
Q |
| |
|
|||| ||||||||||| || |||| ||||| |||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
29367280 |
tttttaaactcaataaaaagtattgaacgatggaccgaaaggtgaagtccaataactgttatttcatcatctca |
29367353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 495
Target Start/End: Complemental strand, 26493197 - 26493085
Alignment:
| Q |
384 |
ttttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat- |
482 |
Q |
| |
|
|||| |||| |||||| || |||| ||||| ||| ||||||||||||| ||| |||||||||||||||| ||||||| | | |||||||||||| |
|
|
| T |
26493197 |
tttttaaacgcaataaaaagtattgaacgatggactgaaaggtgaagttcaatgacaattatttcatcatctcaaatatcaaccgatggatcgaaagatg |
26493098 |
T |
|
| Q |
483 |
aagtttgatattg |
495 |
Q |
| |
|
||||||||||||| |
|
|
| T |
26493097 |
aagtttgatattg |
26493085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 91; Significance: 7e-44; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 369 - 498
Target Start/End: Original strand, 14925748 - 14925878
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
14925748 |
aatctaatttcattgttttcaaactcagtaacaagtattaaacgaaggaccgaaaggtgaagtataatagttgttatttcatcatctcaaatatcaaacg |
14925847 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| |
|
|
| T |
14925848 |
aaggatcgaaagatgaagtttaatattggaa |
14925878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 369 - 498
Target Start/End: Original strand, 15349214 - 15349344
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15349214 |
aatctaatttcattgttttcaaactcagtaacaagtattaaacgaaggaccgaaaggtgaagtataatagttgttatttcatcatctcaaatatcaaacg |
15349313 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| |
|
|
| T |
15349314 |
aaggatcgaaagatgaagtttaatattggaa |
15349344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 369 - 498
Target Start/End: Original strand, 1864535 - 1864665
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
|||||| ||||||| |||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
1864535 |
aatctattttcattgttttcaaactcagtaacaagtattaaacaaaggaccgaaatgtgaagtttaatagttgttatttcatcatctcaaatatcaaacg |
1864634 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |
|
|
| T |
1864635 |
aaggatcgaaagatgaagtttgatattggaa |
1864665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 15523287 - 15523391
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| || ||||||| | |||||||||||||| ||||||||||| |
|
|
| T |
15523287 |
aataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatat |
15523386 |
T |
|
| Q |
494 |
tggaa |
498 |
Q |
| |
|
||||| |
|
|
| T |
15523387 |
tggaa |
15523391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 395 - 498
Target Start/End: Complemental strand, 679323 - 679219
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| | || ||| ||||||||||||||||||||||||||||||||||| || ||||||| | |||||||||||||| |||||||||| |
|
|
| T |
679323 |
aataacaagtattaatctaaggactgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatac |
679224 |
T |
|
| Q |
494 |
tggaa |
498 |
Q |
| |
|
||||| |
|
|
| T |
679223 |
tggaa |
679219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 369 - 498
Target Start/End: Complemental strand, 6847688 - 6847558
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
|||||||| ||||| |||| ||||||| |||||| ||||||| ||| |||||| | |||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
6847688 |
aatctaatctcattgtttttaaactcagtaacaagtattaaatgaagtaccgaacagagaagtttaatagttgttacttcatcatctcaaatatcaaaca |
6847589 |
T |
|
| Q |
469 |
aaggatcgaa-agataagtttgatattggaa |
498 |
Q |
| |
|
||| | ||| ||| |||||||||||||||| |
|
|
| T |
6847588 |
aagtactgaacagagaagtttgatattggaa |
6847558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 38877664 - 38877768
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| |||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||| ||| || ||||||||||| |
|
|
| T |
38877664 |
aataacaagtattaatcgaaggaccgaaatgtgaagtttaatagttgttatttcatcatcacaaatatcaagtgaaggatccaaaaatgaagtttgatat |
38877763 |
T |
|
| Q |
494 |
tggaa |
498 |
Q |
| |
|
||||| |
|
|
| T |
38877764 |
tggaa |
38877768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 455
Target Start/End: Original strand, 11281531 - 11281613
Alignment:
| Q |
373 |
taatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatct |
455 |
Q |
| |
|
|||| ||||| |||| || |||| |||||| |||||| ||| |||||||| ||||||||||||| ||||||||| ||||||| |
|
|
| T |
11281531 |
taatctcattgtttttaatctcagtaacaagaattaaatgaaggaccgaaatgtgaagtttaataattgttattttatcatct |
11281613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 11483687 - 11483634
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
||||||||||||||||| ||| || |||||| ||||||||||||||||||||| |
|
|
| T |
11483687 |
tcaataacaaatattaatcgatggatcgaaagatgaagtttaatagttgttatt |
11483634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 420 - 498
Target Start/End: Original strand, 17911869 - 17911949
Alignment:
| Q |
420 |
gaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat--aagtttgatattggaa |
498 |
Q |
| |
|
||||||||||||||||||||| ||| ||||| ||| || ||||||| |||||||||||||| || ||||||||||||| |
|
|
| T |
17911869 |
gaaaggtgaagtttaatagttattaattcataatcacaaatatcaagtgaaggatcgaaagatgaaattttgatattggaa |
17911949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 498
Target Start/End: Complemental strand, 30063793 - 30063686
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat--aagtttga |
490 |
Q |
| |
|
|||||||||| |||||| ||| || |||||| ||||||||||||||||||||| ||||| || ||||||| | ||||||| ||| || || ||||| |
|
|
| T |
30063793 |
tcaataacaagtattaatcgatggatcgaaagatgaagtttaatagttgttattgattcatcacaaatatcaagcgaaggatcaaaatatgaaattttga |
30063694 |
T |
|
| Q |
491 |
tattggaa |
498 |
Q |
| |
|
|||||||| |
|
|
| T |
30063693 |
tattggaa |
30063686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 482
Target Start/End: Complemental strand, 4465589 - 4465527
Alignment:
| Q |
420 |
gaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| | ||||||| | |||||||||||||| |
|
|
| T |
4465589 |
gaaaggtgaagtttaatggttgttaattcataatcataaatatcaagcgaaggatcgaaagat |
4465527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 46274356 - 46274406
Alignment:
| Q |
396 |
ataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
|||||||||||||| ||| || |||||| ||||||||||||||||||||| |
|
|
| T |
46274356 |
ataacaaatattaatcgatggatcgaaagatgaagtttaatagttgttatt |
46274406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 433
Target Start/End: Original strand, 11242699 - 11242732
Alignment:
| Q |
400 |
caaatattaaacgaatgaccgaaaggtgaagttt |
433 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
|
|
| T |
11242699 |
caaatatcaaacgaatgaccgaaaggtgaagttt |
11242732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 16897094 - 16897041
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
||||||||||||||||| ||| || |||||| ||||||||||||||| ||||| |
|
|
| T |
16897094 |
tcaataacaaatattaatcgatggatcgaaagatgaagtttaatagtttttatt |
16897041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 433
Target Start/End: Original strand, 11281615 - 11281647
Alignment:
| Q |
401 |
aaatattaaacgaatgaccgaaaggtgaagttt |
433 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |
|
|
| T |
11281615 |
aaatattaaacgaatgaccgaaaagtgaagttt |
11281647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 91; Significance: 7e-44; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 369 - 498
Target Start/End: Complemental strand, 21511792 - 21511662
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
21511792 |
aatctaatttcatcgttttcaaactcaataacaagtgttaaacgaaggaccgaaaggtgaagtttaatagttgttatttcatcatctcaaatatcaaacg |
21511693 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
|| ||||||||||| |||||||||||||||| |
|
|
| T |
21511692 |
aatgatcgaaagatgaagtttgatattggaa |
21511662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 369 - 498
Target Start/End: Complemental strand, 25592977 - 25592847
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
25592977 |
aatctaatttcattgttttcaaactcagtaacatgtgttaaacgaaggaccgaaaggtgaagtttaatagttgttatttcatcatctccaatatcaaacg |
25592878 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| |
|
|
| T |
25592877 |
aaggatcgaaagatgaagtttgatatgggaa |
25592847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 369 - 499
Target Start/End: Complemental strand, 21516271 - 21516140
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
||||||||||||| |||| ||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
21516271 |
aatctaatttcatcgttttgaaactcagtaacaagtgttaaacgaagaaccgaaaggtgaagtttaatagttgttatttcatcatctcaaatatcaaacg |
21516172 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaat |
499 |
Q |
| |
|
||||||||||| || ||||||||||||||||| |
|
|
| T |
21516171 |
aaggatcgaaaaatgaagtttgatattggaat |
21516140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 395 - 498
Target Start/End: Complemental strand, 24371269 - 24371165
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| || ||||||| | |||||||||||||| ||||||||||| |
|
|
| T |
24371269 |
aataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatat |
24371170 |
T |
|
| Q |
494 |
tggaa |
498 |
Q |
| |
|
||||| |
|
|
| T |
24371169 |
tggaa |
24371165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 23704534 - 23704623
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
||||||||||||||||| |||| || |||||| ||||||||||||||||||||| ||||| || |||| || | |||||||||||||| |
|
|
| T |
23704534 |
tcaataacaaatattaatcgaaggatcgaaagatgaagtttaatagttgttattgattcatcacaaatattaagcgaaggatcgaaagat |
23704623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 24322057 - 24322161
Alignment:
| Q |
397 |
taacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aag-tttgatatt |
494 |
Q |
| |
|
|||||| |||||| ||| ||| ||||||||||||||||||||||||| ||||| ||| || ||||||| | || ||||||||||| ||| ||||||||| |
|
|
| T |
24322057 |
taacaagtattaatcgatggactgaaaggtgaagtttaatagttgttaattcataatcacaaatatcaagcgaatgatcgaaagatgaagttttgatatt |
24322156 |
T |
|
| Q |
495 |
ggaat |
499 |
Q |
| |
|
||||| |
|
|
| T |
24322157 |
ggaat |
24322161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 24177526 - 24177437
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
|||||||||| |||||| | || || |||||| ||||||||||||||||||||| ||||| || |||| || | |||||||||||||| |
|
|
| T |
24177526 |
tcaataacaagtattaatcaaaggatcgaaagatgaagtttaatagttgttattgattcatcacaaatattaagcgaaggatcgaaagat |
24177437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 498
Target Start/End: Original strand, 20852387 - 20852490
Alignment:
| Q |
397 |
taacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aag-tttgatatt |
494 |
Q |
| |
|
|||||| |||||| ||| ||| ||||| |||||||||||||||||| ||||| ||| || ||||||| |||||||||||||| ||| ||||||||| |
|
|
| T |
20852387 |
taacaagtattaatcgatggactgaaagacgaagtttaatagttgttaattcataatcacaaatatcaagtgaaggatcgaaagatgaagttttgatatt |
20852486 |
T |
|
| Q |
495 |
ggaa |
498 |
Q |
| |
|
|||| |
|
|
| T |
20852487 |
ggaa |
20852490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 23256850 - 23256797
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
||||||||||||||||| ||| || |||||| |||||||||||| |||||||| |
|
|
| T |
23256850 |
tcaataacaaatattaatcgatggatcgaaagatgaagtttaatatttgttatt |
23256797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 29577179 - 29577126
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
|||||||||| |||||| |||| || ||||| ||||||||||||||||||||| |
|
|
| T |
29577179 |
tcaataacaagtattaatcgaaggattgaaagatgaagtttaatagttgttatt |
29577126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 83; Significance: 4e-39; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 369 - 498
Target Start/End: Original strand, 19222145 - 19222275
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
||||||||| |||| ||||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19222145 |
aatctaattccattgttttcaaactcggtaacaagtattaaacgaaggaccgaaagatgaagtttaatagttgttatttcatcatctcaaatatcaaacg |
19222244 |
T |
|
| Q |
469 |
aaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
|||||||| ||||| |||||||||||||||| |
|
|
| T |
19222245 |
aaggatcggaagatgaagtttgatattggaa |
19222275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 115 - 264
Target Start/End: Original strand, 20684442 - 20684591
Alignment:
| Q |
115 |
ataagccgtagttttaactgcttttagcattttaattcaataaagtcttcttagttttagtcgtatttcttgagttattttactacaaaaactttggttt |
214 |
Q |
| |
|
||||| ||||||||| | ||||||| ||||||||||| ||||| |||| ||||||||| ||| |||||||||| ||||||||||||||| || |||||| |
|
|
| T |
20684442 |
ataagtcgtagtttttattgcttttggcattttaatttaataaggtctcgttagttttaatcgaatttcttgagctattttactacaaaagctatggttt |
20684541 |
T |
|
| Q |
215 |
tcgtttcaggttgaatatgaaagaagcaagatggtttggatgaagtttgg |
264 |
Q |
| |
|
|||||||||||| | ||| ||||||| |||||||||| |||||||||| |
|
|
| T |
20684542 |
tcgtttcaggttaattatcaaagaagtgtgatggtttggttgaagtttgg |
20684591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 24166521 - 24166626
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aag-tttgata |
492 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||| | |||||||||||||| ||| ||||||| |
|
|
| T |
24166521 |
aataacaagtattaatcgaatgaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagcgaaggatcgaaagatgaagatttgata |
24166620 |
T |
|
| Q |
493 |
ttggaa |
498 |
Q |
| |
|
|||||| |
|
|
| T |
24166621 |
ttggaa |
24166626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 395 - 498
Target Start/End: Complemental strand, 23029397 - 23029293
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| ||||||||| |||||| |||||||||||||||||||||| || ||||||| | |||||||||||||| ||||||||||| |
|
|
| T |
23029397 |
aataacaagtattaatcgaaggaccgaaagatgaagtctaatagttgttatttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatat |
23029298 |
T |
|
| Q |
494 |
tggaa |
498 |
Q |
| |
|
||||| |
|
|
| T |
23029297 |
tggaa |
23029293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 23114517 - 23114621
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||| | || ||| ||| ||| |||||| |||| |
|
|
| T |
23114517 |
aataacaagtattaatcgaaggatcgaaaggtgaagtttaatagttgttatttcatcatctcaaatatcaagcgaatgatagaatgatgaagtttaatat |
23114616 |
T |
|
| Q |
494 |
tggaa |
498 |
Q |
| |
|
||||| |
|
|
| T |
23114617 |
tggaa |
23114621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 20724680 - 20724591
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
|||||||||| |||||| ||||||| |||||| ||||||||||||||||||||| ||||| || |||| || | |||||||||||||| |
|
|
| T |
20724680 |
tcaataacaagtattaatcgaatgatcgaaagatgaagtttaatagttgttattgattcatcacaaatattaagcgaaggatcgaaagat |
20724591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 20054539 - 20054655
Alignment:
| Q |
112 |
gtgataagccgtagttttaactgcttttagcattttaattcaataaagtcttcttagttttagtcgtatttcttgagttattttactacaaaaa-ctttg |
210 |
Q |
| |
|
|||||||| |||||||||| || |||||||||||||||||||||| | ||| || |||||| |||||||||||| |||||||||||||||| || || |
|
|
| T |
20054539 |
gtgataagtcgtagttttaggtg-ttttagcattttaattcaataagat-ttcgtaactttagttgtatttcttgagctattttactacaaaaatctatg |
20054636 |
T |
|
| Q |
211 |
gttttcgtttcaggttgaa |
229 |
Q |
| |
|
||||| | |||||||||| |
|
|
| T |
20054637 |
attttcatctcaggttgaa |
20054655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 389 - 467
Target Start/End: Complemental strand, 42687511 - 42687433
Alignment:
| Q |
389 |
aaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaac |
467 |
Q |
| |
|
||||||| ||||| ||||||||||| ||| || || |||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
42687511 |
aaactcagtaacacgtattaaacgaaataccaaacggagaagtttaatagttgttacttcatcatctcaaatatcaaac |
42687433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 17408564 - 17408475
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
|||||||||| |||||| |||| || |||||| ||||||||||||||||||||| ||||| || |||| || | |||||||||||||| |
|
|
| T |
17408564 |
tcaataacaagtattaatcgaaggatcgaaagatgaagtttaatagttgttattgattcatcacaaatattaagcgaaggatcgaaagat |
17408475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 22942619 - 22942669
Alignment:
| Q |
396 |
ataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
||||||| |||||| |||| || |||||| ||||||||||||||||||||| |
|
|
| T |
22942619 |
ataacaagtattaatcgaaggatcgaaagatgaagtttaatagttgttatt |
22942669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 22948826 - 22948879
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
|||||||||| |||||| |||| | |||||| ||||||||||||||||||||| |
|
|
| T |
22948826 |
tcaataacaagtattaatcgaagcatcgaaagatgaagtttaatagttgttatt |
22948879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 78; Significance: 4e-36; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 113 - 298
Target Start/End: Complemental strand, 13833788 - 13833605
Alignment:
| Q |
113 |
tgataagccgtagttttaactgcttttagcattttaattcaataaagtcttcttagttttagtcgtatttcttgagttattttactacaaaaactttggt |
212 |
Q |
| |
|
||||||||||||||||| | || |||| |||||||||||||||||| | || || ||||| ||||||||||||||| |||||| ||||| | ||| | | |
|
|
| T |
13833788 |
tgataagccgtagtttttattgtttttggcattttaattcaataaaattttgttggttttggtcgtatttcttgagctattttgctacagacactatag- |
13833690 |
T |
|
| Q |
213 |
tttcgtttcaggttgaatatgaaagaagcaagatggtttggatgaagtttggacaagaaaagataaaagaatgcatgaagaaaagg |
298 |
Q |
| |
|
|||| ||||||||||||||| |||||| ||||||||||||| |||||||||| |||||||||| || | || |||||||||||||| |
|
|
| T |
13833689 |
tttcatttcaggttgaatatcaaagaaacaagatggtttggttgaagtttgggcaagaaaaga-aagaaaaggcatgaagaaaagg |
13833605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 498
Target Start/End: Complemental strand, 9774908 - 9774805
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| |||||||| |||||||||||||||| |||||||||| || || ||||||| | || ||||||||||| || |||||||| |
|
|
| T |
9774908 |
aataacaagtattaatcgaaggaccgaaatgtgaagtttaatagtt-ttatttcatcctcacaaatatcaagcgaatgatcgaaagataaaatttgatat |
9774810 |
T |
|
| Q |
494 |
tggaa |
498 |
Q |
| |
|
||||| |
|
|
| T |
9774809 |
tggaa |
9774805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 369 - 467
Target Start/End: Complemental strand, 16999019 - 16998922
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaac |
467 |
Q |
| |
|
|||||||| |||| ||||| |||||||||||||| ||||||||||| |||||| | ||||||||||||| |||| ||| |||||||| ||||||||| |
|
|
| T |
16999019 |
aatctaatctcatcatttt-aaactcaataacaagtattaaacgaagtaccgaacagagaagtttaatagtcgttacttcgtcatctcaaatatcaaac |
16998922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 498
Target Start/End: Complemental strand, 9762453 - 9762350
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| ||||||| |||||||||||||||| |||||||||| || || ||||||| | || ||||||||||| || |||||||| |
|
|
| T |
9762453 |
aataacaagtattaatcgaagaaccgaaatgtgaagtttaatagtt-ttatttcatcctcacaaatatcaagcgaatgatcgaaagatgaaatttgatat |
9762355 |
T |
|
| Q |
494 |
tggaa |
498 |
Q |
| |
|
||||| |
|
|
| T |
9762354 |
tggaa |
9762350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 497
Target Start/End: Original strand, 11271550 - 11271679
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt--tcatcatctcatatatcaaa |
466 |
Q |
| |
|
|||||||| |||| ||||| || || |||||||||||| ||||||| || |||||| |||||||| ||| || ||||| |||| |||||| |||||||| |
|
|
| T |
11271550 |
aatctaatctcatcatttttaagcttaataacaaatatcaaacgaaggatcgaaagatgaagtttgata-ttattatttatcat-atctcaaatatcaaa |
11271647 |
T |
|
| Q |
467 |
caaaggatcgaaagat-aagtttgatattgga |
497 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |
|
|
| T |
11271648 |
tgaaggatcgaaagatgaagtttgatattgga |
11271679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 439 - 498
Target Start/End: Complemental strand, 27992273 - 27992213
Alignment:
| Q |
439 |
ttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatattggaa |
498 |
Q |
| |
|
||||||||||||||||||| ||||||| | || ||||||||||| |||||||||||||||| |
|
|
| T |
27992273 |
ttgttatttcatcatctcaaatatcaagcgaaagatcgaaagatgaagtttgatattggaa |
27992213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 498
Target Start/End: Complemental strand, 11577581 - 11577474
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aag-tttga |
490 |
Q |
| |
|
|||||||||| |||||| ||| || |||||| ||||| ||||||||||||||| ||||| || ||||||| ||||||||||||| || ||| ||||| |
|
|
| T |
11577581 |
tcaataacaagtattaattgaaggatcgaaagatgaaggttaatagttgttattgattcatcacaaatatcaagcaaaggatcgaaatatgaagttttga |
11577482 |
T |
|
| Q |
491 |
tattggaa |
498 |
Q |
| |
|
|||||||| |
|
|
| T |
11577481 |
tattggaa |
11577474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 11827243 - 11827190
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
||||||||||||||||| ||| || |||||| ||||||||||||||||||||| |
|
|
| T |
11827243 |
tcaataacaaatattaatcgatggatcgaaagatgaagtttaatagttgttatt |
11827190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 22654076 - 22653998
Alignment:
| Q |
136 |
ttttagcattttaattcaataaagtcttcttagttttagtcgtatttcttgagttattttactacaaaaactttggtttt |
215 |
Q |
| |
|
|||||||||| ||||||||||||| || ||||||||| || || || | ||| |||||||||||||| ||||||||||| |
|
|
| T |
22654076 |
ttttagcattcaaattcaataaagtattgttagttttaatcctagtt-tagagctattttactacaaatactttggtttt |
22653998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 437
Target Start/End: Complemental strand, 27992538 - 27992496
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaata |
437 |
Q |
| |
|
|||||||| |||||| |||| |||||||||||||||||||||| |
|
|
| T |
27992538 |
aataacaagtattaatcgaaggaccgaaaggtgaagtttaata |
27992496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 482
Target Start/End: Original strand, 40846745 - 40846823
Alignment:
| Q |
404 |
tattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
|||||| |||| || |||||| ||||||||||||||||||||| ||||| || |||| || | |||||||||||||| |
|
|
| T |
40846745 |
tattaatcgaaggatcgaaagatgaagtttaatagttgttattgattcatcacaaatattaagcgaaggatcgaaagat |
40846823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 8532149 - 8532201
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttat |
445 |
Q |
| |
|
||||||||||||||||| ||| || |||||| |||||||||||| ||||||| |
|
|
| T |
8532149 |
tcaataacaaatattaatcgatggatcgaaagatgaagtttaataattgttat |
8532201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0855 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0855
Description:
Target: scaffold0855; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 3728 - 3832
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||| |
|
|
| T |
3728 |
aataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagagaaggatcgaaagatgaagtttgatat |
3827 |
T |
|
| Q |
494 |
tggaa |
498 |
Q |
| |
|
||||| |
|
|
| T |
3828 |
tggaa |
3832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0847 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0847
Description:
Target: scaffold0847; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 3893 - 3997
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||| |
|
|
| T |
3893 |
aataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagagaaggatcgaaagatgaagtttgatat |
3992 |
T |
|
| Q |
494 |
tggaa |
498 |
Q |
| |
|
||||| |
|
|
| T |
3993 |
tggaa |
3997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 168452 - 168556
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| |||||||| ||||||||||||||||||| |||||||||| || ||||||| ||||||||| |||||| ||||||||||| |
|
|
| T |
168452 |
aataacaagtattaatcgaaggaccgaaatgtgaagtttaatagttgttgtttcatcatcacaaatatcaagcaaaggatcaaaagatgaagtttgatat |
168551 |
T |
|
| Q |
494 |
tggaa |
498 |
Q |
| |
|
||||| |
|
|
| T |
168552 |
tggaa |
168556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 59; Significance: 9e-25; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 369 - 498
Target Start/End: Complemental strand, 9798334 - 9798204
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaaca |
468 |
Q |
| |
|
|||||||| ||||| |||| ||||||| |||||| ||||||||||| || ||||| |||||||||||||||||||||||||| |||||| |||||| | |
|
|
| T |
9798334 |
aatctaatctcattgtttttaaactcagtaacaagtattaaacgaaggatcgaaatgtgaagtttaatagttgttatttcataatctcaaatatcagaag |
9798235 |
T |
|
| Q |
469 |
aaggatcgaaa-gataagtttgatattggaa |
498 |
Q |
| |
|
||||| ||||| | |||||||||||||||| |
|
|
| T |
9798234 |
aaggaacgaaatgtgaagtttgatattggaa |
9798204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 22904856 - 22904943
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
|||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| || ||||||| | || ||||||||||| |
|
|
| T |
22904856 |
aataacaagtattaatcgaaggaccgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagcgaacgatcgaaagat |
22904943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 411 - 498
Target Start/End: Complemental strand, 24221365 - 24221276
Alignment:
| Q |
411 |
cgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagataa--gtttgatattggaa |
498 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||| ||||| || ||||||| | || |||||||||||| ||||||||||||| |
|
|
| T |
24221365 |
cgaaggaccgaaagatgaagtttaatagttgttatttcgtcatcacaaatatcaagcgaaatatcgaaagataaagttttgatattggaa |
24221276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 447
Target Start/End: Complemental strand, 17315293 - 17315216
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttattt |
447 |
Q |
| |
|
|||||||| |||| ||||| || || |||||||||||| ||||||| ||| |||||||||||||| ||| ||||||||| |
|
|
| T |
17315293 |
aatctaatctcatcatttttaagcttaataacaaatatcaaacgaaggactgaaaggtgaagtttgata-ttgttattt |
17315216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 23455838 - 23455891
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
|||||||||| |||||| |||| || |||||| ||||||||||||||||||||| |
|
|
| T |
23455838 |
tcaataacaattattaatcgaaggatcgaaagatgaagtttaatagttgttatt |
23455891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 447
Target Start/End: Complemental strand, 17337204 - 17337127
Alignment:
| Q |
369 |
aatctaatttcattattttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttattt |
447 |
Q |
| |
|
|||||| | |||| ||||| || || |||||||||||| ||||||| |||||||| ||||||||| ||| ||||||||| |
|
|
| T |
17337204 |
aatctactctcatcatttttaagcttaataacaaatatcaaacgaaggaccgaaatgtgaagtttgata-ttgttattt |
17337127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 395 - 494
Target Start/End: Complemental strand, 31965341 - 31965241
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||||| | || |||| |||||| ||||||||||| |
|
|
| T |
31965341 |
aataacaagtattaatcgaaggaccaaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagcgaatgatcaaaagatgaagtttgatat |
31965242 |
T |
|
| Q |
494 |
t |
494 |
Q |
| |
|
| |
|
|
| T |
31965241 |
t |
31965241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 20221446 - 20221531
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaag |
480 |
Q |
| |
|
|||||||| ||||| |||| || |||||||||||||||||||||||||||||||||||| || ||||||| | |||||||||||| |
|
|
| T |
20221446 |
aataacaagcattaatcgaaggatcgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagcgaaggatcgaaag |
20221531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 22115430 - 22115515
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaag |
480 |
Q |
| |
|
|||||||| ||||| |||| || |||||||||||||||||||||||||||||||||||| || ||||||| | |||||||||||| |
|
|
| T |
22115430 |
aataacaagcattaatcgaaggatcgaaaggtgaagtttaatagttgttatttcatcatcacaaatatcaagcgaaggatcgaaag |
22115515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 29682866 - 29682970
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aagtttgatat |
493 |
Q |
| |
|
|||||||| |||||| |||| |||||||| ||||||||||||||||||||||||| ||| | ||||||| | ||| |||||||||| ||||||||||| |
|
|
| T |
29682866 |
aataacaagtattaatcgaaggaccgaaatgtgaagtttaatagttgttatttcaacattataaatatcaagcgaagtatcgaaagatgaagtttgatat |
29682965 |
T |
|
| Q |
494 |
tggaa |
498 |
Q |
| |
|
||||| |
|
|
| T |
29682966 |
tggaa |
29682970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 384 - 498
Target Start/End: Original strand, 17756769 - 17756884
Alignment:
| Q |
384 |
ttttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat- |
482 |
Q |
| |
|
|||| ||||||||||| ||||||| ||||| ||||||||||||| || |||| | ||||||||||||||| ||||||||| ||||||| |||||| |
|
|
| T |
17756769 |
tttttaaactcaataaaaaatattgaacgatgaaccgaaaggtgaatttcaataactaatatttcatcatctcaaatatcaaacgaaggatcaaaagatg |
17756868 |
T |
|
| Q |
483 |
aagtttgatattggaa |
498 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
17756869 |
aagttagatattggaa |
17756884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 20225343 - 20225446
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagataagtttgatatt |
494 |
Q |
| |
|
|||| ||| |||||| |||| |||||||||||| ||||||||||||||||||||||||| || || |||| |||||||||||||| | |||||||| |
|
|
| T |
20225343 |
aatagcaagtattaatcgaagcaccgaaaggtgaggtttaatagttgttatttcatcatcacaaatgtcaagggaaggatcgaaagatgaagttgatatt |
20225442 |
T |
|
| Q |
495 |
ggaa |
498 |
Q |
| |
|
|||| |
|
|
| T |
20225443 |
ggaa |
20225446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 22119327 - 22119430
Alignment:
| Q |
395 |
aataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagataagtttgatatt |
494 |
Q |
| |
|
|||| ||| |||||| |||| |||||||||||| ||||||||||||||||||||||||| || || |||| |||||||||||||| | |||||||| |
|
|
| T |
22119327 |
aatagcaagtattaatcgaagcaccgaaaggtgaggtttaatagttgttatttcatcatcacaaatgtcaagggaaggatcgaaagatgaagttgatatt |
22119426 |
T |
|
| Q |
495 |
ggaa |
498 |
Q |
| |
|
|||| |
|
|
| T |
22119427 |
ggaa |
22119430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 482
Target Start/End: Original strand, 18973919 - 18974003
Alignment:
| Q |
398 |
aacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
||||| |||||||||| ||||||||||| ||||||||||||| ||| ||||| ||| || ||||||| | ||| |||||||||| |
|
|
| T |
18973919 |
aacaagtattaaacgattgaccgaaaggcaaagtttaatagtttttaattcataatcacaaatatcaagcgaagaatcgaaagat |
18974003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 498
Target Start/End: Original strand, 20464632 - 20464738
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aag-tttga |
490 |
Q |
| |
|
|||||||||| |||||| |||| || |||||| ||||||||||||| ||||||| | ||| || ||||||| |||||||||||||||| ||| ||||| |
|
|
| T |
20464632 |
tcaataacaagtattaatcgaaggatcgaaagatgaagtttaatag-tgttattgattaatcacaaatatcaagcaaaggatcgaaagatgaagttttga |
20464730 |
T |
|
| Q |
491 |
tattggaa |
498 |
Q |
| |
|
|||||||| |
|
|
| T |
20464731 |
tattggaa |
20464738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 479
Target Start/End: Original strand, 15172481 - 15172567
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaa |
479 |
Q |
| |
|
||||||||||||||||| ||| || |||||| ||||||||||||||||||||| ||||| || ||||||| ||||||||||| |
|
|
| T |
15172481 |
tcaataacaaatattaatcgatggatcgaaagatgaagtttaatagttgttattgattcatcacaaatatcaagtgaaggatcgaaa |
15172567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 479
Target Start/End: Complemental strand, 15470993 - 15470907
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaa |
479 |
Q |
| |
|
||||||||||||||||| ||| || |||||| ||||||||||||||||||||| ||||| || ||||||| ||||||||||| |
|
|
| T |
15470993 |
tcaataacaaatattaatcgatggatcgaaagatgaagtttaatagttgttattgattcatcacaaatatcaagtgaaggatcgaaa |
15470907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 14992106 - 14992053
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
||||||||||||||||| |||| || | |||| ||||||||||||||||||||| |
|
|
| T |
14992106 |
tcaataacaaatattaatcgaaggatcaaaagatgaagtttaatagttgttatt |
14992053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 22601184 - 22601131
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatt |
446 |
Q |
| |
|
|||||||||| |||||| |||| || |||||| ||||||||||||||||||||| |
|
|
| T |
22601184 |
tcaataacaagtattaatcgaaggatcgaaagatgaagtttaatagttgttatt |
22601131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 482
Target Start/End: Complemental strand, 24392699 - 24392634
Alignment:
| Q |
417 |
accgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
||||||||| |||||||||||||||||| |||| ||| || |||| || |||| ||||||||||| |
|
|
| T |
24392699 |
accgaaaggcgaagtttaatagttgttaattcacaatcacaaatataaagcaaaagatcgaaagat |
24392634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 15162472 - 15162576
Alignment:
| Q |
396 |
ataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aag-tttgatat |
493 |
Q |
| |
|
|||||||||||||| ||| | |||||| ||||||||||||||||||||| ||||| || |||| || |||||||||||||| ||| |||||||| |
|
|
| T |
15162472 |
ataacaaatattaatcgatgaatcgaaagatgaagtttaatagttgttattgattcatcacaaatataaagtgaaggatcgaaagatgaagttttgatat |
15162571 |
T |
|
| Q |
494 |
tggaa |
498 |
Q |
| |
|
||||| |
|
|
| T |
15162572 |
tggaa |
15162576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 498
Target Start/End: Original strand, 33138 - 33241
Alignment:
| Q |
397 |
taacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aag-tttgatatt |
494 |
Q |
| |
|
|||||| |||||| ||| ||| |||| |||||||||||||||||||| ||||| ||| || ||||||| | |||||||||||||| ||| ||||||||| |
|
|
| T |
33138 |
taacaagtattaatcgatggactgaaaagtgaagtttaatagttgttaattcataatcacaaatatcaagcgaaggatcgaaagatgaagttttgatatt |
33237 |
T |
|
| Q |
495 |
ggaa |
498 |
Q |
| |
|
|||| |
|
|
| T |
33238 |
ggaa |
33241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 498
Target Start/End: Original strand, 38445 - 38548
Alignment:
| Q |
397 |
taacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aag-tttgatatt |
494 |
Q |
| |
|
|||||| |||||| ||| ||| |||| |||||||||||||||||||| ||||| ||| || ||||||| | |||||||||||||| ||| ||||||||| |
|
|
| T |
38445 |
taacaagtattaatcgatggactgaaaagtgaagtttaatagttgttaattcataatcacaaatatcaagcgaaggatcgaaagatgaagttttgatatt |
38544 |
T |
|
| Q |
495 |
ggaa |
498 |
Q |
| |
|
|||| |
|
|
| T |
38545 |
ggaa |
38548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0088 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0088
Description:
Target: scaffold0088; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 38794 - 38883
Alignment:
| Q |
393 |
tcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
|||||||||| | ||||||||| || |||||| ||||||||||||||||||||| |||||||| ||| || | |||||||||||||| |
|
|
| T |
38794 |
tcaataacaagtgttaaacgaaggatcgaaagatgaagtttaatagttgttattgattcatctcaaatactaaccgaaggatcgaaagat |
38883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0102 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0102
Description:
Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 482
Target Start/End: Original strand, 36622 - 36720
Alignment:
| Q |
384 |
ttttcaaactcaataacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat |
482 |
Q |
| |
|
|||| ||||||||||| || |||| || ||| ||||||| | ||| || |||| | |||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
36622 |
tttttaaactcaataaaaagtattgaatgaagaaccgaaaagagaaattcaataactattatttcatcatctcaaatatcaaacgaaggatcgaaagat |
36720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 498
Target Start/End: Complemental strand, 22563 - 22461
Alignment:
| Q |
398 |
aacaaatattaaacgaatgaccgaaaggtgaagtttaatagttgttatttcatcatctcatatatcaaacaaaggatcgaaagat-aag-tttgatattg |
495 |
Q |
| |
|
||||| |||||||| | |||||||||| |||||||||||||||||| ||| | ||| || ||||||| | ||| |||||||||| ||| |||||||||| |
|
|
| T |
22563 |
aacaagtattaaacaattgaccgaaagacgaagtttaatagttgttaattcttaatcacaaatatcaagcgaagaatcgaaagatgaagttttgatattg |
22464 |
T |
|
| Q |
496 |
gaa |
498 |
Q |
| |
|
||| |
|
|
| T |
22463 |
gaa |
22461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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