View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17999_high_1 (Length: 524)

Name: NF17999_high_1
Description: NF17999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17999_high_1
NF17999_high_1
[»] chr1 (41 HSPs)
chr1 (20-524)||(9629608-9630138)
chr1 (147-243)||(36878417-36878514)
chr1 (167-242)||(398772-398847)
chr1 (147-234)||(14359537-14359623)
chr1 (167-262)||(20157338-20157432)
chr1 (147-236)||(5898279-5898368)
chr1 (167-236)||(16927198-16927267)
chr1 (190-243)||(38503320-38503373)
chr1 (168-243)||(1486715-1486790)
chr1 (167-242)||(7918218-7918293)
chr1 (168-242)||(17754289-17754363)
chr1 (193-243)||(52903252-52903302)
chr1 (190-243)||(9828044-9828097)
chr1 (167-236)||(34298413-34298482)
chr1 (144-243)||(24577192-24577292)
chr1 (147-243)||(28273094-28273190)
chr1 (190-269)||(113299-113382)
chr1 (190-229)||(2896141-2896180)
chr1 (247-294)||(9828122-9828169)
chr1 (185-228)||(11605956-11605999)
chr1 (190-241)||(17425101-17425152)
chr1 (168-247)||(22794080-22794159)
chr1 (190-241)||(25098563-25098614)
chr1 (147-234)||(27471581-27471668)
chr1 (191-241)||(6427351-6427401)
chr1 (190-244)||(17831536-17831590)
chr1 (189-223)||(22781441-22781475)
chr1 (189-243)||(34371713-34371766)
chr1 (190-236)||(40181871-40181917)
chr1 (198-243)||(1864886-1864931)
chr1 (191-228)||(2851022-2851059)
chr1 (190-247)||(12443462-12443519)
chr1 (194-243)||(44482234-44482283)
chr1 (190-243)||(46348389-46348442)
chr1 (188-236)||(48148050-48148099)
chr1 (167-223)||(5927366-5927422)
chr1 (191-243)||(9709821-9709873)
chr1 (191-243)||(24176373-24176425)
chr1 (190-242)||(25361886-25361938)
chr1 (191-243)||(31015044-31015096)
chr1 (147-243)||(48450593-48450689)
[»] chr6 (45 HSPs)
chr6 (185-294)||(9025450-9025558)
chr6 (170-241)||(10888982-10889053)
chr6 (167-286)||(9027155-9027273)
chr6 (147-247)||(2117034-2117133)
chr6 (167-243)||(7086772-7086848)
chr6 (190-294)||(7938116-7938214)
chr6 (170-243)||(30866150-30866223)
chr6 (191-243)||(7265599-7265651)
chr6 (167-235)||(8805586-8805654)
chr6 (167-243)||(13851713-13851789)
chr6 (190-242)||(17341671-17341723)
chr6 (190-242)||(19040352-19040404)
chr6 (167-238)||(7625099-7625170)
chr6 (190-294)||(7996327-7996437)
chr6 (190-294)||(8022364-8022474)
chr6 (146-241)||(32511674-32511769)
chr6 (149-243)||(16833267-16833361)
chr6 (191-236)||(1532241-1532286)
chr6 (167-236)||(3398596-3398664)
chr6 (167-236)||(9658856-9658925)
chr6 (190-243)||(20371116-20371169)
chr6 (147-243)||(10770680-10770776)
chr6 (147-243)||(19147799-19147895)
chr6 (195-247)||(24832593-24832645)
chr6 (196-294)||(31959165-31959264)
chr6 (189-236)||(32320682-32320729)
chr6 (251-294)||(32978844-32978887)
chr6 (176-247)||(34446551-34446622)
chr6 (176-226)||(7723273-7723323)
chr6 (156-234)||(12696290-12696368)
chr6 (191-241)||(13689500-13689550)
chr6 (168-234)||(25038086-25038152)
chr6 (191-229)||(34447378-34447416)
chr6 (198-247)||(6389751-6389800)
chr6 (190-243)||(7377979-7378032)
chr6 (190-243)||(10842532-10842585)
chr6 (190-243)||(13364711-13364764)
chr6 (190-243)||(16766697-16766750)
chr6 (198-247)||(17168465-17168514)
chr6 (190-243)||(21924941-21924994)
chr6 (190-243)||(26562689-26562742)
chr6 (147-243)||(34595090-34595187)
chr6 (237-269)||(7930358-7930390)
chr6 (197-237)||(8389484-8389524)
chr6 (191-235)||(31579239-31579283)
[»] chr7 (37 HSPs)
chr7 (167-243)||(21140988-21141064)
chr7 (148-243)||(15902780-15902875)
chr7 (167-236)||(5235963-5236032)
chr7 (170-243)||(20549771-20549844)
chr7 (167-227)||(26733281-26733341)
chr7 (179-242)||(17851420-17851483)
chr7 (176-242)||(42720897-42720963)
chr7 (170-243)||(3520348-3520421)
chr7 (198-247)||(23751908-23751957)
chr7 (190-235)||(29787383-29787428)
chr7 (190-242)||(5548676-5548728)
chr7 (167-243)||(19206027-19206103)
chr7 (190-242)||(32308120-32308172)
chr7 (167-243)||(49107798-49107873)
chr7 (247-294)||(598275-598322)
chr7 (247-294)||(9778572-9778619)
chr7 (147-267)||(12289070-12289189)
chr7 (198-247)||(5938480-5938529)
chr7 (181-234)||(11831423-11831476)
chr7 (198-235)||(11890933-11890970)
chr7 (197-234)||(13300417-13300454)
chr7 (186-235)||(14729697-14729746)
chr7 (196-269)||(18215167-18215239)
chr7 (190-243)||(19992001-19992054)
chr7 (190-243)||(24339642-24339695)
chr7 (198-247)||(29812666-29812715)
chr7 (195-235)||(2424619-2424659)
chr7 (147-246)||(4017797-4017897)
chr7 (198-246)||(8239053-8239101)
chr7 (151-226)||(11722121-11722197)
chr7 (167-243)||(22602716-22602792)
chr7 (190-242)||(22868042-22868094)
chr7 (190-234)||(23191896-23191940)
chr7 (190-234)||(25481902-25481946)
chr7 (167-243)||(26329388-26329464)
chr7 (167-243)||(27945018-27945094)
chr7 (148-247)||(43249950-43250050)
[»] scaffold0020 (1 HSPs)
scaffold0020 (168-269)||(135293-135393)
[»] chr3 (36 HSPs)
chr3 (176-237)||(23870571-23870632)
chr3 (140-243)||(26508060-26508163)
chr3 (190-243)||(8383257-8383310)
chr3 (170-247)||(34307782-34307859)
chr3 (191-243)||(17005625-17005677)
chr3 (190-268)||(13620744-13620823)
chr3 (190-243)||(7928450-7928503)
chr3 (162-243)||(11658787-11658868)
chr3 (191-243)||(8039841-8039893)
chr3 (176-224)||(15544679-15544727)
chr3 (176-236)||(29112293-29112353)
chr3 (147-234)||(26492220-26492307)
chr3 (197-243)||(29508451-29508497)
chr3 (252-294)||(29508522-29508564)
chr3 (167-243)||(11665921-11665997)
chr3 (162-262)||(14223841-14223940)
chr3 (191-242)||(1550141-1550192)
chr3 (198-261)||(25892468-25892530)
chr3 (190-236)||(10690275-10690321)
chr3 (177-227)||(21257008-21257058)
chr3 (198-248)||(25652032-25652082)
chr3 (147-243)||(40993341-40993432)
chr3 (176-242)||(49505161-49505227)
chr3 (198-247)||(15864841-15864890)
chr3 (247-292)||(15999957-16000002)
chr3 (180-241)||(16192758-16192819)
chr3 (170-243)||(22774076-22774149)
chr3 (196-241)||(25948895-25948940)
chr3 (190-247)||(35994740-35994796)
chr3 (190-234)||(4987306-4987350)
chr3 (191-294)||(11610522-11610623)
chr3 (198-234)||(15796309-15796345)
chr3 (167-247)||(24205043-24205123)
chr3 (167-235)||(25064886-25064954)
chr3 (190-242)||(32804547-32804599)
chr3 (189-229)||(51206373-51206413)
[»] chr8 (29 HSPs)
chr8 (168-242)||(24362209-24362283)
chr8 (176-243)||(34897071-34897138)
chr8 (167-243)||(12570514-12570590)
chr8 (167-247)||(39820406-39820486)
chr8 (156-243)||(24669399-24669486)
chr8 (196-242)||(3025557-3025603)
chr8 (176-246)||(3658133-3658203)
chr8 (198-243)||(11927092-11927137)
chr8 (190-243)||(12606835-12606888)
chr8 (189-229)||(18067954-18067994)
chr8 (176-236)||(39954292-39954352)
chr8 (167-234)||(4673440-4673507)
chr8 (167-234)||(8343293-8343360)
chr8 (190-236)||(4611534-4611580)
chr8 (173-243)||(20679401-20679471)
chr8 (189-243)||(25566840-25566894)
chr8 (167-241)||(36934647-36934721)
chr8 (198-243)||(11944673-11944718)
chr8 (175-236)||(12570747-12570808)
chr8 (190-243)||(13844602-13844655)
chr8 (190-243)||(31236583-31236636)
chr8 (167-243)||(2572062-2572138)
chr8 (189-225)||(18069155-18069191)
chr8 (250-294)||(22652057-22652101)
chr8 (167-263)||(22850321-22850416)
chr8 (190-242)||(27101515-27101566)
chr8 (148-236)||(29775994-29776082)
chr8 (172-236)||(34201059-34201123)
chr8 (195-243)||(34222952-34223000)
[»] chr5 (33 HSPs)
chr5 (193-247)||(5467980-5468034)
chr5 (167-248)||(25863181-25863262)
chr5 (190-243)||(28588680-28588733)
chr5 (173-236)||(12927637-12927700)
chr5 (147-294)||(2436878-2437025)
chr5 (190-243)||(3966503-3966556)
chr5 (183-236)||(10022625-10022678)
chr5 (167-248)||(14574051-14574131)
chr5 (190-243)||(23220983-23221036)
chr5 (189-241)||(6471897-6471949)
chr5 (170-242)||(27144443-27144515)
chr5 (191-243)||(30502394-30502446)
chr5 (191-243)||(30542737-30542789)
chr5 (173-241)||(39205863-39205931)
chr5 (190-294)||(39695956-39696058)
chr5 (167-243)||(23015995-23016073)
chr5 (192-243)||(34879352-34879403)
chr5 (167-234)||(42488068-42488135)
chr5 (186-236)||(17593735-17593785)
chr5 (188-242)||(25817493-25817547)
chr5 (176-234)||(39698527-39698585)
chr5 (170-223)||(7175045-7175098)
chr5 (198-247)||(7997168-7997217)
chr5 (176-229)||(19438329-19438382)
chr5 (190-243)||(21191062-21191115)
chr5 (189-242)||(32630742-32630795)
chr5 (190-243)||(41091263-41091316)
chr5 (198-247)||(43554529-43554578)
chr5 (170-242)||(19168828-19168900)
chr5 (191-243)||(21576751-21576803)
chr5 (190-234)||(27932235-27932279)
chr5 (191-243)||(36838544-36838596)
chr5 (197-268)||(38464344-38464416)
[»] chr2 (39 HSPs)
chr2 (193-243)||(34691811-34691861)
chr2 (193-243)||(34714223-34714273)
chr2 (190-243)||(37411250-37411303)
chr2 (167-234)||(12940950-12941017)
chr2 (167-241)||(21616739-21616813)
chr2 (170-243)||(23718006-23718079)
chr2 (170-243)||(24105678-24105751)
chr2 (167-243)||(20539680-20539756)
chr2 (147-243)||(30404856-30404952)
chr2 (147-242)||(27286299-27286394)
chr2 (176-243)||(29970555-29970622)
chr2 (190-236)||(28677909-28677955)
chr2 (176-242)||(31808063-31808129)
chr2 (189-243)||(44860319-44860373)
chr2 (170-247)||(23354654-23354731)
chr2 (198-247)||(25544489-25544538)
chr2 (190-294)||(42832237-42832335)
chr2 (167-235)||(21782832-21782900)
chr2 (191-235)||(28412351-28412395)
chr2 (182-229)||(22084852-22084899)
chr2 (190-229)||(24975345-24975384)
chr2 (168-243)||(36756350-36756425)
chr2 (197-268)||(18622613-18622690)
chr2 (190-227)||(1327978-1328015)
chr2 (190-235)||(16069268-16069313)
chr2 (190-235)||(18276521-18276566)
chr2 (190-247)||(19573978-19574035)
chr2 (251-296)||(23058387-23058432)
chr2 (198-243)||(30527601-30527646)
chr2 (171-243)||(4882702-4882774)
chr2 (193-225)||(6045940-6045972)
chr2 (190-226)||(8950338-8950374)
chr2 (190-246)||(10535762-10535818)
chr2 (147-243)||(18841019-18841115)
chr2 (192-236)||(25080902-25080946)
chr2 (191-243)||(31018591-31018643)
chr2 (203-243)||(38355893-38355933)
chr2 (191-243)||(39279676-39279728)
chr2 (190-234)||(39323264-39323308)
[»] chr4 (28 HSPs)
chr4 (190-294)||(37203264-37203366)
chr4 (147-247)||(22440602-22440702)
chr4 (167-262)||(24343484-24343578)
chr4 (190-294)||(3712458-3712568)
chr4 (176-226)||(56488533-56488583)
chr4 (167-256)||(14126104-14126193)
chr4 (196-272)||(35952588-35952670)
chr4 (149-239)||(7012025-7012115)
chr4 (190-236)||(8423731-8423777)
chr4 (185-235)||(56257928-56257978)
chr4 (190-243)||(40613450-40613503)
chr4 (170-205)||(35160982-35161017)
chr4 (191-241)||(36635325-36635375)
chr4 (170-236)||(40179649-40179715)
chr4 (197-243)||(54580029-54580075)
chr4 (190-243)||(999354-999407)
chr4 (177-246)||(19230312-19230381)
chr4 (147-243)||(21945459-21945556)
chr4 (170-243)||(26504305-26504378)
chr4 (185-234)||(28964263-28964312)
chr4 (147-243)||(49430982-49431079)
chr4 (192-236)||(903924-903968)
chr4 (191-235)||(16189710-16189754)
chr4 (242-286)||(21873315-21873359)
chr4 (242-286)||(21929176-21929220)
chr4 (191-243)||(29205445-29205497)
chr4 (196-236)||(30838216-30838256)
chr4 (190-234)||(38847027-38847071)
[»] scaffold0022 (1 HSPs)
scaffold0022 (167-236)||(90820-90889)
[»] scaffold1528 (1 HSPs)
scaffold1528 (168-242)||(1013-1087)
[»] scaffold0123 (1 HSPs)
scaffold0123 (189-243)||(44531-44585)
[»] scaffold0044 (2 HSPs)
scaffold0044 (247-292)||(53258-53303)
scaffold0044 (193-243)||(53183-53233)
[»] scaffold0024 (1 HSPs)
scaffold0024 (182-242)||(68249-68309)
[»] scaffold0003 (2 HSPs)
scaffold0003 (247-294)||(241672-241719)
scaffold0003 (147-235)||(241550-241639)
[»] scaffold0085 (1 HSPs)
scaffold0085 (170-244)||(26373-26447)
[»] scaffold0050 (1 HSPs)
scaffold0050 (151-243)||(70238-70331)
[»] scaffold0223 (1 HSPs)
scaffold0223 (190-234)||(20172-20216)
[»] scaffold0103 (1 HSPs)
scaffold0103 (190-234)||(51811-51855)
[»] scaffold0053 (1 HSPs)
scaffold0053 (167-243)||(8775-8851)
[»] scaffold0004 (1 HSPs)
scaffold0004 (190-234)||(92807-92851)


Alignment Details
Target: chr1 (Bit Score: 377; Significance: 0; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 20 - 524
Target Start/End: Complemental strand, 9630138 - 9629608
Alignment:
Q  20 cttagaataatgtctgttcttgaagatctaaggcttgagattgttcatgttagagttaatactgctgatgaaaccatgctatacttgttcactattaagg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9630138 cttagaataatgtctgttcttgaagatctaaggcttgagattgttcatgttagagttaatactgctgatgaaaccatgctatacttgtttactattaagg 9630039  T
Q  120 taacttaatcttt---------tttctgattacacactatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgata 210  Q
    |||||||||||||         |||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  9630038 taacttaatctttgtgtatttttttctggttacacactatgaagcacggatacggccacgacatggacaccgacacatcgacaccgctaataatttgata 9629939  T
Q  211 aaatcatataattcagtgtgattata------ggtgtcgtgtc---------------acgtgtccgacaccgggacacgtctcgtccaagaagtgtccg 289  Q
    ||||||||||||||||||||||||||      |||||||||||               || |||||||||||||||||||||||||||||||||||||||    
T  9629938 aaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgacaccgggacacgtctcgtccaagaagtgtccg 9629839  T
Q  290 tgcttacacagtagtgaagtacattactactgactgtatagtataataactaatcaatgacatgcagtacacaaagcatcttttctctactgatcatttc 389  Q
    ||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9629838 tgcttacacagtagtgaagtacattactactg----tatagtataataactaatcaatgacatgcagtacacaaagcatcttttctctactgatcatttc 9629743  T
Q  390 tgaaacaccagggatgtatatcataacatcattctggcattgtatgtatttggtgaaaaaatcaatgtatggtccaatattgtttatttaattcatagca 489  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9629742 tgaaacaccagggatgtatatcataacatcattctggcattgtatgtatttggtgaaaaaatgaatgtatggtccaatattgtttatttaattcatagca 9629643  T
Q  490 gctaatgattgggtatgcatgtatcatgtgtgtta 524  Q
    ||||||||||| |||||||||||||||||||||||    
T  9629642 gctaatgattgagtatgcatgtatcatgtgtgtta 9629608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 36878417 - 36878514
Alignment:
Q  147 ctatgaagcacggagacggccacg-acacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||| |||| |||| ||| |||||| |||||   ||||||||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  36878417 ctatgaagcacggatacggacacggacatagacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcg 36878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 167 - 242
Target Start/End: Complemental strand, 398847 - 398772
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    |||||||| ||||| |||||   ||||||||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  398847 cacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 14359623 - 14359537
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    |||||||||||||| |||| |||||||||||||| |||||   ||||| ||||||||||||| ||||||| |||||| ||||| ||||    
T  14359623 ctatgaagcacggatacggacacgacacagacacggacacgccgacacagctaataatttga-aaaatcacataatttagtgtaatta 14359537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 20157432 - 20157338
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccg 262  Q
    |||||||| | ||| ||||||| ||||||||||||||| ||| ||||||| |||||||||||| || ||| |||||| ||  ||||||||||||||    
T  20157432 cacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcg-gtgtcgtgtccgacaccg 20157338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 5898368 - 5898279
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    ||||| |||||||| |||| || ||||||||||| || ||   ||||||||||||||| ||| ||||||| |||||||||||| ||||||    
T  5898368 ctatgtagcacggatacggacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattata 5898279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 16927267 - 16927198
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||||||||||| ||||| | | ||  ||||||||||||| |||||||||||||||||||| ||||||    
T  16927267 cacgacacagacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattata 16927198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 38503320 - 38503373
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||||||| ||||||||||| |||||||| |||||| ||||||    
T  38503320 gacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcg 38503373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 1486790 - 1486715
Alignment:
Q  168 acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||| || || |||||  |||||| ||||||||||||| ||||||| |||||||||||| |||||| ||||||    
T  1486790 acgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcg 1486715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 242
Target Start/End: Complemental strand, 7918293 - 7918218
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    |||||||||||||  |||||  ||||| | |||||||||||| ||||||| |||||||||||| |||||| |||||    
T  7918293 cacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtc 7918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 17754289 - 17754363
Alignment:
Q  168 acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||||||||| | ||||||  ||||||||||||||||||| ||||| | |||||||||||| | |||| |||||    
T  17754289 acgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc 17754363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 52903252 - 52903302
Alignment:
Q  193 accgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||| ||||||||| |||||||||||||||||||||| |||||| ||||||    
T  52903252 accgttaataatttaataaaatcatataattcagtgtaattatatgtgtcg 52903302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 9828044 - 9828097
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||| |||||||||||||||||||| |||||||||||| ||| || ||||||    
T  9828044 gacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcg 9828097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 34298413 - 34298482
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||||| || || ||||||  |||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  34298413 cacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 24577292 - 24577192
Alignment:
Q  144 acactatgaagcacggagacggccacgacaca-gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||||||||||||||| |||| |||   ||| ||||| |||||  ||||||  |||||||||||| ||||||| |||||||||||| |||| | |||||    
T  24577292 acactatgaagcacggatacggacactgaacacgacacggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 24577193  T
Q  243 g 243  Q
    |    
T  24577192 g 24577192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 28273190 - 28273094
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||| |||| || ||||  ||||| ||||   ||||||  ||||| |||||| |||||||||||||||||||| |||| | ||||||    
T  28273190 ctatgaagcacggatacggacatgacaaggacactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcg 28273094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 113299 - 113382
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgatta------taggtgtcgtgtcacgtgtccgacaccgggacacg 269  Q
    ||||| ||||||||||||| ||||||| |||||||||||| ||||      ||||||||||||  ||||||| |||||||||||||    
T  113299 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgt--cgtgtccaacaccgggacacg 113382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 2896180 - 2896141
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgt 229  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  2896180 gacaccgctaataatttgagaaaatcacataattcagtgt 2896141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 9828122 - 9828169
Alignment:
Q  247 cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 294  Q
    ||||||||||||||||||||||||||  ||| || |||||||||||||    
T  9828122 cacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgctt 9828169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 11605999 - 11605956
Alignment:
Q  185 acattgacaccgctaataatttgataaaatcatataattcagtg 228  Q
    |||| |||| |||||||||||||| |||||||||||||||||||    
T  11605999 acatcgacatcgctaataatttgaaaaaatcatataattcagtg 11605956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 17425152 - 17425101
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt 241  Q
    ||||||| ||||||||||||||||||| |||||||| ||| |||||| ||||    
T  17425152 gacaccgataataatttgataaaatcacataattcaatgtaattatatgtgt 17425101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 22794159 - 22794080
Alignment:
Q  168 acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    |||||| |||||| ||||| |  |||| | ||||||||||| ||||| | ||||| |||||| |||||||||||||||||    
T  22794159 acgacatagacactgacacgtcaacacggataataatttgaaaaaatgacataatacagtgtaattataggtgtcgtgtc 22794080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 25098614 - 25098563
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt 241  Q
    ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||    
T  25098614 gacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 27471668 - 27471581
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    |||||||||||  | |||| | ||||||| |||| ||||||  || |||||||||||||||| |||| || |||||||||||| ||||    
T  27471668 ctatgaagcacatatacggacgcgacacaaacactgacacaccgataccgctaataatttgagaaaagcacataattcagtgtaatta 27471581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 6427351 - 6427401
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgt 241  Q
    |||||||||||||||||| ||||||| |||||||| ||| |||||| ||||    
T  6427351 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 6427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 17831590 - 17831536
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgt 244  Q
    ||||||||||||||||||| ||||||| || ||||||||| || ||| |||||||    
T  17831590 gacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcgt 17831536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 22781441 - 22781475
Alignment:
Q  189 tgacaccgctaataatttgataaaatcatataatt 223  Q
    |||||||||||||||||| ||||||||||||||||    
T  22781441 tgacaccgctaataattttataaaatcatataatt 22781475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 34371713 - 34371766
Alignment:
Q  189 tgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||| ||||||    
T  34371713 tgacaccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcg 34371766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 40181871 - 40181917
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    ||||| ||||||||||||| ||||||| |||||||||||| ||||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagtgtaattata 40181917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 1864931 - 1864886
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||| ||||||| |||||||||||| |||||| ||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 1864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 2851022 - 2851059
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtg 228  Q
    |||||||||||||||||||||||| | |||||||||||    
T  2851022 acaccgctaataatttgataaaattacataattcagtg 2851059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 12443519 - 12443462
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||| ||||||||||||| ||||||| |||||||||||| ||| || ||| ||||||    
T  12443519 gacacagctaataatttgagaaaatcacataattcagtgtaattgtatgtgacgtgtc 12443462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 44482234 - 44482283
Alignment:
Q  194 ccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||||||| ||||||| |||||||||||| |||||| ||||||    
T  44482234 ccgcttataatttgagaaaatcacataattcagtgtaattatatgtgtcg 44482283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 46348442 - 46348389
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||||||||||| |||||||||||||| ||||| |||| | ||||||    
T  46348442 gacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 46348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 48148099 - 48148050
Alignment:
Q  188 ttgacaccgctaataatttgataaaa-tcatataattcagtgtgattata 236  Q
    ||||||||||||||||||| | |||| |||||||||||||||| ||||||    
T  48148099 ttgacaccgctaataattttaaaaaaatcatataattcagtgtaattata 48148050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 5927422 - 5927366
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataatt 223  Q
    |||||||| ||||| |||||  | |||| ||||||||||||| ||||||||||||||    
T  5927422 cacgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatt 5927366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 9709821 - 9709873
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||||||| ||||||| |||||||  ||| |||||| ||||||    
T  9709821 acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcg 9709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 24176425 - 24176373
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||| ||||||||||| ||||| | || ||||||||| |||||||||||||    
T  24176425 acaccgataataatttgagaaaataacatcattcagtgtaattataggtgtcg 24176373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 25361886 - 25361938
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    |||||| || ||||||||| ||||||| |||||||||||| |||||| |||||    
T  25361886 gacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtc 25361938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 31015044 - 31015096
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||| ||||||||||||| ||||||| |||||||||||| |||| | ||||||    
T  31015044 acacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 48450689 - 48450593
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||| ||| |||| |||||||| ||||| |||||    |||| ||||||||||||| ||||| | |||||| ||||| |||| | ||||||    
T  48450689 ctatgaagcatggatacggacacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcg 48450593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 9e-22; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 9025558 - 9025450
Alignment:
Q  185 acattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagt 284  Q
    |||| ||||| ||||||||||||| ||||||| |||||||||||| |||||| |||||| ||  ||||||||||||||||||||| ||  ||| ||||||    
T  9025558 acatggacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg-gtgtcgtgtccgacaccgggacacgcctaatccgagaagt 9025460  T
Q  285 gtccgtgctt 294  Q
    ||||||||||    
T  9025459 gtccgtgctt 9025450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 10889053 - 10888982
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt 241  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  10889053 gacacggacaccgacacatagacaccgctaataatttgataaaatcacataatttagtgtgattatatgtgt 10888982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 9027155 - 9027273
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggac 266  Q
    |||||||| ||||| |||||   ||||||||||||||||||| | ||||| ||||||| |||| |||||| |||||| ||  ||||||||||||||||||    
T  9027155 cacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcg-gtgtcgtgtccgacaccgggac 9027253  T
Q  267 acgtctcgtccaagaagtgt 286  Q
    ||| ||  |||||| |||||    
T  9027254 acggctaatccaaggagtgt 9027273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 247
Target Start/End: Original strand, 2117034 - 2117133
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgt 246  Q
    ||||||||||||||||||| |||||||| || || |||||   |||||| |||||||||||| ||||||| |||||||| ||  |||||| |||||||||    
T  2117034 ctatgaagcacggagacggacacgacac-gatacggacactccgacacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtcgtgt 2117132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 7086772 - 7086848
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||||||||| | | ||| ||||||||||||| ||||||| |||||| ||||| |||||| ||||||    
T  7086772 cacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcg 7086848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 7938116 - 7938214
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccg 289  Q
    ||||| ||||||||||||| |||||||||||||| ||||| |||||| ||||||      ||||||||||||| |||||| ||  ||| || ||||||||    
T  7938116 gacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcg------gtgtccgacaccgagacacgcctgatccgaggagtgtccg 7938209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 30866223 - 30866150
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||||||||||   |||||||||||||||||| ||||||| |||||||| ||| |||||| ||||||    
T  30866223 gacactgacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 30866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 7265651 - 7265599
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||| ||||||    
T  7265651 acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 7265599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 8805654 - 8805586
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattat 235  Q
    |||||||||||||||||||| | | ||| ||||||||||||| ||||||| |||||| ||||| |||||    
T  8805654 cacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 13851713 - 13851789
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||| ||||| ||||| | ||||||||||||||||||| ||||| |  ||||||||||| |||||| ||||||    
T  13851713 cacgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 13851789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 17341723 - 17341671
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||||| |||||    
T  17341723 gacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 19040352 - 19040404
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||| |||||    
T  19040352 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 7625099 - 7625170
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattatagg 238  Q
    |||||||||||||||||||| | ||||| | ||||||||||| ||||| |||||||| ||| | ||||||||    
T  7625099 cacgacacagacaccgacacgtcgacacggataataatttgagaaaatgatataatttagtataattatagg 7625170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 7996437 - 7996327
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattata------ggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaag 283  Q
    ||||| ||||||||||||| |||||||||||||||||||| ||||||      ||||||| | ||||||||  |||| |||||||| ||  |||||| ||    
T  7996437 gacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcgcgacacgtgtctaacacggggacacgcctaatccaaggag 7996338  T
Q  284 tgtccgtgctt 294  Q
    | |||||||||    
T  7996337 tctccgtgctt 7996327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 8022364 - 8022474
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattata------ggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaag 283  Q
    ||||| ||||||||||||| |||||||||||||||||||| ||||||      ||||||| | ||||||||  |||| |||||||| ||  |||||| ||    
T  8022364 gacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcgcgacacgtgtctaacacggggacacgcctaatccaaggag 8022463  T
Q  284 tgtccgtgctt 294  Q
    | |||||||||    
T  8022464 tctccgtgctt 8022474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 32511769 - 32511674
Alignment:
Q  146 actatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt 241  Q
    ||||||||||||||| || | || ||||||||||  | | |  |||||||||||||||||| | ||||||| |||||||||||| |||||| ||||    
T  32511769 actatgaagcacggataccgacatgacacagacattgcccctctgacaccgctaataatttaagaaaatcacataattcagtgtaattataagtgt 32511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 16833267 - 16833361
Alignment:
Q  149 atgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||| || |||| |||||||||||||| |||||   |||||  |||||||||||| ||||||| ||| |||||||| |||| | ||||||    
T  16833267 atgaagcactgatacggacacgacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcg 16833361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 1532241 - 1532286
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||||||||||||||||||||| | |||||||||||| ||||||    
T  1532241 acaccgctaataatttgataaaattacataattcagtgtaattata 1532286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 3398596 - 3398664
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||||| ||||| |||||   ||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  3398596 cacgacacggacactgacacgccgacacagctaataatttga-aaaatcatataattcagtgtaattata 3398664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 9658856 - 9658925
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||||| ||||| |||||   ||||||||||||||||| | ||||||| |||||||||||| ||||||    
T  9658856 cacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattata 9658925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 20371169 - 20371116
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||||||| ||||||| |||| ||| |||||||||| ||||||    
T  20371169 gacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcg 20371116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 10770776 - 10770680
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||| |||| |||||||  ||||| |||||    ||||  |||||||||||| ||||||| |||||||||||| |||| | ||||||    
T  10770776 ctatgaagcacggatacggacacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 10770680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 19147799 - 19147895
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||  | | |||||||||||||  ||||||  ||||||| ||||||||| | |||||||||||  |||| || |||||| ||||||    
T  19147799 ctatgaagcacggatgcagacacgacacagacagtgacacaaagacaccgttaataatttaagaaaatcatatagatcagagtaattatatgtgtcg 19147895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 24832593 - 24832645
Alignment:
Q  195 cgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    |||||||||||||| |||||| ||||||| ||||| |||||| ||||||||||    
T  24832593 cgctaataatttgagaaaatcttataatttagtgtaattatatgtgtcgtgtc 24832645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 294
Target Start/End: Original strand, 31959165 - 31959264
Alignment:
Q  196 gctaataatttgataaaatcatataattcagtgtgattataggtgtc-gtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 294  Q
    ||||||||||||| ||||||| ||||| |||||| |||| | ||||| | | || |||||||||||||||||||  ||  ||| || |||||||||||||    
T  31959165 gctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcggcgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgctt 31959264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 32320729 - 32320682
Alignment:
Q  189 tgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||||| ||||||||||||||||||| |||||||| ||| ||||||    
T  32320729 tgacaccgttaataatttgataaaatcacataattcaatgtcattata 32320682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 32978887 - 32978844
Alignment:
Q  251 tgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 294  Q
    ||||||||||||||||||||||  |||||| |||||||||||||    
T  32978887 tgtccgacaccgggacacgtctaatccaaggagtgtccgtgctt 32978844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 34446551 - 34446622
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||| |||||  |||||| | ||||||||||| ||||| | |||||||||||| || ||||||||||||||    
T  34446551 gacacagacactctgacacggataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc 34446622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 7723323 - 7723273
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcag 226  Q
    ||||| ||||| | ||||| ||||||||||||| |||||||||||||||||    
T  7723323 gacactgacacgtggacactgctaataatttgagaaaatcatataattcag 7723273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 12696290 - 12696368
Alignment:
Q  156 acggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    ||||| |||| |||||||| ||||| |||||   ||||| ||||||||||||| ||||| | |||||||||||| ||||    
T  12696290 acggacacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 12696368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 13689550 - 13689500
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgt 241  Q
    |||||||||||||||||||||||||||| ||||  |||| |||||| ||||    
T  13689550 acaccgctaataatttgataaaatcatacaatttcgtgtaattatacgtgt 13689500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 25038152 - 25038086
Alignment:
Q  168 acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    |||||||||| || ||||| ||||||||| ||||||||||| ||||| | |||||| ||||| ||||    
T  25038152 acgacacagatactgacacgttgacaccgttaataatttgagaaaattacataatttagtgtaatta 25038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 229
Target Start/End: Complemental strand, 34447416 - 34447378
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgt 229  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  34447416 acaccgttaataatttgataaaatcatataatttagtgt 34447378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 6389751 - 6389800
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||||||||| ||||| |||||||| ||||| || ||||||||||||||    
T  6389751 taataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc 6389800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 7377979 - 7378032
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||| ||||||| ||||||| |||||||| ||| |||||| ||||||    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcg 7378032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 10842532 - 10842585
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||||||| ||||||| |||||| ||||| || ||| ||||||    
T  10842532 gacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtcg 10842585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 13364764 - 13364711
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||| ||||||||| |||||||||||||||||||| || ||| ||||||    
T  13364764 gacactgcttataatttgagaaaatcatataattcagtgtaatcatatgtgtcg 13364711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 16766697 - 16766750
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||||||||||| ||||||| |||||||||||| |||| | ||||||    
T  16766697 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 16766750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 17168514 - 17168465
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||||||||| ||||| |||||||| ||||| || ||||||||||||||    
T  17168514 taataatttgagaaaatgatataatttagtgtaataataggtgtcgtgtc 17168465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 21924994 - 21924941
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||||||||||| || |||| |||||||||||| |||||| ||||||    
T  21924994 gacactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcg 21924941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 26562689 - 26562742
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||| ||||||| ||||||| |||||||||||| |||||| ||||||    
T  26562689 gacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 26562742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 34595090 - 34595187
Alignment:
Q  147 ctatgaagcacggagac-ggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||| || || |||||||| ||||  |||||   |||||  |||||||||||| ||||||| |||||||||||| |||| | ||||||    
T  34595090 ctatgaagcacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 34595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 7930358 - 7930390
Alignment:
Q  237 ggtgtcgtgtcacgtgtccgacaccgggacacg 269  Q
    ||||||||||||||||||||||||| |||||||    
T  7930358 ggtgtcgtgtcacgtgtccgacaccaggacacg 7930390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 8389524 - 8389484
Alignment:
Q  197 ctaataatttgataaaatcatataattcagtgtgattatag 237  Q
    |||||||||| | |||||||||||||||||||| |||||||    
T  8389524 ctaataatttaagaaaatcatataattcagtgtaattatag 8389484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 31579283 - 31579239
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattat 235  Q
    |||||| ||||||||||| ||||||| |||||||||||| |||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 8e-19; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 21141064 - 21140988
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||| ||| ||||||| | |||||| |||||||||| | ||||||||||||||||||||||||||||||||||    
T  21141064 cacgacacggacgccgacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgattataggtgtcg 21140988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 243
Target Start/End: Original strand, 15902780 - 15902875
Alignment:
Q  148 tatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||| | |||| |||||||||||||| ||||    ||||||  ||||||||||||||||||| |||||| ||||| |||||| ||||||    
T  15902780 tatgaagcacgaatacggacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcg 15902875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 5235963 - 5236032
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||||||||||| ||||| | ||||||||||||||||| | ||||| |||||||| ||||| ||||||    
T  5235963 cacgacacagacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattata 5236032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 20549771 - 20549844
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||| |||| ||||||  ||||||||||||||||||| |||||||  ||||||||||| |||||| ||||||    
T  20549771 gacacatacactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcg 20549844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 26733281 - 26733341
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagt 227  Q
    |||||||| ||||| ||||| | ||||||||||||||||||| ||||||| ||||||||||    
T  26733281 cacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagt 26733341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 17851420 - 17851483
Alignment:
Q  179 accgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    |||||||||| || |||||||||||||| | ||||||| |||||||||||| |||||| |||||    
T  17851420 accgacacatcgataccgctaataattttagaaaatcacataattcagtgtaattatatgtgtc 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 42720963 - 42720897
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||| ||||| ||||||||||||||||||||| ||||||| |||||| | ||| |||||| |||||    
T  42720963 gacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtc 42720897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 3520421 - 3520348
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||  |||||  |||||||| |||| |||||| |||||||||||||||| ||| |||||| ||||||    
T  3520421 gacacagacattgacacgctgacaccgataatcatttgagaaaatcatataattcaatgtaattatatgtgtcg 3520348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 23751908 - 23751957
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||||||||||||||| |||||||| ||||| || ||||||||||||||    
T  23751908 taataatttgataaaatgatataatttagtgtaatcataggtgtcgtgtc 23751957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 29787428 - 29787383
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattat 235  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  29787428 gacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 5548676 - 5548728
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||||||| ||||||||| ||||||| |||||||||||| |||||| |||||    
T  5548676 gacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtc 5548728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 19206027 - 19206103
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||| |||||| ||||   ||||||||||||||||||| ||||||| |||||||| | | |||||| ||||||    
T  19206027 cacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcg 19206103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 32308120 - 32308172
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  32308120 gacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtc 32308172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 49107798 - 49107873
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||| ||| | ||||||  ||||||||||||||||||| |||| || |||||| |||||||||||| ||||||    
T  49107798 cacgacacggactctgacacaccgacaccgctaataatttgagaaaa-cacataattgagtgtgattatatgtgtcg 49107873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 598275 - 598322
Alignment:
Q  247 cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 294  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||||||    
T  598275 cacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgctt 598322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 9778572 - 9778619
Alignment:
Q  247 cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 294  Q
    ||||||||||||||||||||||| ||  |||||| |||||||||||||    
T  9778572 cacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgctt 9778619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 12289070 - 12289189
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgac-accgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtg 245  Q
    |||||||||||||| || | ||| |||| |||||||||||   | | || ||||||||||||| ||||||| |||||||||||  |||||  ||||||||    
T  12289070 ctatgaagcacggatacagacacaacacggacaccgacacgccggccactgctaataatttgagaaaatcacataattcagtggaattat--gtgtcgtg 12289167  T
Q  246 tcacgtgtccgacaccgggaca 267  Q
    ||| |||| |||| | ||||||    
T  12289168 tcatgtgttcgactctgggaca 12289189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 5938480 - 5938529
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||||||||||||||| | |||||||||| | ||||||||||| |||||    
T  5938480 taataatttgataaaataacataattcagtataattataggtgttgtgtc 5938529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 11831423 - 11831476
Alignment:
Q  181 cgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    |||||||| |||||  |||||||||||| |||||||||||||| ||||| ||||    
T  11831423 cgacacatcgacacaactaataatttgaaaaaatcatataatttagtgtaatta 11831476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 11890970 - 11890933
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattat 235  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  11890970 taataatttgaaaaaatcatataattcagtgtaattat 11890933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 13300417 - 13300454
Alignment:
Q  197 ctaataatttgataaaatcatataattcagtgtgatta 234  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  13300417 ctaataatttgaaaaaatcatataattcagtgtaatta 13300454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 14729697 - 14729746
Alignment:
Q  186 cattgacaccgctaataatttgataaaatcatataattcagtgtgattat 235  Q
    |||||| |||||||||||||||| |||||||  ||||||||||| |||||    
T  14729697 cattgaaaccgctaataatttgagaaaatcacgtaattcagtgtaattat 14729746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 18215239 - 18215167
Alignment:
Q  196 gctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacg 269  Q
    ||||||||||||| ||||||| ||||| ||||||  ||| | |||||| ||  |||||||||||||||||||||    
T  18215239 gctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcg-gtgtcgtgtccgacaccgggacacg 18215167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 19992001 - 19992054
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||||||||||| ||||||| ||| |||||||| |||||| ||||||    
T  19992001 gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 19992054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 24339642 - 24339695
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||||||||||| ||||||| |||||||||||| |||| | ||||||    
T  24339642 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 24339695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 29812715 - 29812666
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||||||||| ||||| |||||||| ||||| || ||||||||||||||    
T  29812715 taataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc 29812666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 2424619 - 2424659
Alignment:
Q  195 cgctaataatttgataaaatcatataattcagtgtgattat 235  Q
    |||||||||||||| ||||||| |||||||||||| |||||    
T  2424619 cgctaataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 4017897 - 4017797
Alignment:
Q  147 ctatgaagcacggagac-ggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtg 245  Q
    ||||||||||| || || || |||||||| |||||||||||   ||||| | ||||||||||| ||||  |||||||| ||||| || ||| ||||||||    
T  4017897 ctatgaagcacagacactggacacgacacggacaccgacacgccgacacggataataatttgagaaaacgatataatttagtgtaatcataagtgtcgtg 4017798  T
Q  246 t 246  Q
    |    
T  4017797 t 4017797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 8239101 - 8239053
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcgtgt 246  Q
    ||||||||| | |||||| ||||||||||||| |||||| |||||||||    
T  8239101 taataatttaagaaaatcttataattcagtgtaattatatgtgtcgtgt 8239053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 11722197 - 11722121
Alignment:
Q  151 gaagcacggagac-ggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcag 226  Q
    |||||||||| || || |||||||| ||||| |||||   ||||||||||| ||||||| ||||||| |||||||||    
T  11722197 gaagcacggataccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 22602792 - 22602716
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||| ||| |||||   |||||||  ||| |||||| ||||||| |||||||||||| |||||| ||||||    
T  22602792 cacgacacaggcactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcg 22602716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 22868042 - 22868094
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    |||||| |||||||| ||| ||||||| |||||||||||| |||||| |||||    
T  22868042 gacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 23191896 - 23191940
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||    
T  23191896 gacaccgctaataatttgagaaaatcacatatttcagtgtaatta 23191940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 25481902 - 25481946
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    ||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  25481902 gacacagctaataatttgaaaaaatcacataattcagtgtaatta 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 26329464 - 26329388
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||| |||||   |||| || ||||||||||| |||| || | |||||||||| |||||| ||||||    
T  26329464 cacgacacagacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcg 26329388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 27945018 - 27945094
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||| ||||| |||||   |||||| |||||||||||| ||||| | |||||||||||| |||| | ||||||    
T  27945018 cacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcg 27945094  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 43249950 - 43250050
Alignment:
Q  148 tatgaagcacggagac-ggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgt 246  Q
    ||||||||||||| || || || ||||| ||||| |||||   ||||| | ||||||||||| ||||| | ||||| |||||| |||||| |||||||||    
T  43249950 tatgaagcacggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgt 43250049  T
Q  247 c 247  Q
    |    
T  43250050 c 43250050  T

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Target: scaffold0020 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 168 - 269
Target Start/End: Complemental strand, 135393 - 135293
Alignment:
Q  168 acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggaca 267  Q
    |||||||||||||| |||||  ||||| ||||||||||||| ||||||| ||||||| |||| |||||| |||||| ||  ||||||||||||| |||||    
T  135393 acgacacagacaccaacacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcg-gtgtcgtgtccgacaccaggaca 135295  T
Q  268 cg 269  Q
    ||    
T  135294 cg 135293  T

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Target: chr3 (Bit Score: 46; Significance: 5e-17; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 23870632 - 23870571
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattatag 237  Q
    ||||| ||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23870632 gacacggacacgtcgacaccgctaataatttgaaaaaatcatataattcagtgtgattatag 23870571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 26508060 - 26508163
Alignment:
Q  140 ttacacactatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggt 239  Q
    |||||| |||||||| ||||| |||| ||||| ||||| || |||||  |||||| ||||||||||||| ||||||| |||||||||||| |||| | ||    
T  26508060 ttacacgctatgaagaacggatacggacacgatacagatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagt 26508159  T
Q  240 gtcg 243  Q
    ||||    
T  26508160 gtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 8383257 - 8383310
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| ||||||    
T  8383257 gacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcg 8383310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 34307859 - 34307782
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    |||||||||||  ||||  |||||||||||||||||||| ||||||| ||| |||||||| |||||| ||||||||||    
T  34307859 gacacagacacgaacacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtc 34307782  T

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Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 17005677 - 17005625
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  17005677 acaccactaataatttgataaaatcatataattcagtgtaattataagtgtcg 17005625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 13620823 - 13620744
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc-gtgtcacgtgtccgacaccgggacac 268  Q
    |||||||||| |||||||| ||||||| || ||||||||   ||||| ||||| ||||||||||||||||||||||||||    
T  13620823 gacaccgctagtaatttgagaaaatcacatgattcagtgcagttatatgtgtctgtgtcacgtgtccgacaccgggacac 13620744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 7928450 - 7928503
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||    
T  7928450 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcg 7928503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 11658787 - 11658868
Alignment:
Q  162 acggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||| |||||||||||||| ||||||   ||| || ||||||||||| ||||||  ||||||||||||||||||| ||||||    
T  11658787 acggacacgacacagacactgacacaccaacatcgttaataatttgagaaaatcgcataattcagtgtgattatatgtgtcg 11658868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 8039893 - 8039841
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||| ||||||    
T  8039893 acaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcg 8039841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 15544679 - 15544727
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattc 224  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  15544679 gacactgacacgttgacaccgctaataatttgataaaatcacataattc 15544727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 29112353 - 29112293
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    ||||| ||||| |||||||| ||||| |||||| |||||||||||||||||||| ||||||    
T  29112353 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 29112293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 26492307 - 26492220
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    |||||||||||| | |||| |||||||| ||||| |||||   ||||  ||||||||||||| ||||||||| |||||||||| ||||    
T  26492307 ctatgaagcacgaatacggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaatta 26492220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 29508451 - 29508497
Alignment:
Q  197 ctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||| |||||||||||||||||||| |||||| ||||||    
T  29508451 ctaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 29508522 - 29508564
Alignment:
Q  252 gtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 294  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  29508522 gtccgacaccgggacacgtctaatccaagaagtgtccgtgctt 29508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 11665921 - 11665997
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||| ||||  |||||  |||| |||||||||||||||||||||| | |||| ||||| |||||| ||||||    
T  11665921 cacgacacacacactaacacaccgacaacgctaataatttgataaaatcacacaatttagtgtaattatatgtgtcg 11665997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 262
Target Start/End: Complemental strand, 14223940 - 14223841
Alignment:
Q  162 acggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacacc 261  Q
    |||| ||||||||||||||||||||   ||||| | ||||||||||| ||||  |||||||| |||||  | ||| ||||||||||  ||||||||||||    
T  14223940 acggacacgacacagacaccgacacgccgacacagataataatttgagaaaacgatataatttagtgtattcataagtgtcgtgtc-ggtgtccgacacc 14223842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 1550141 - 1550192
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    |||||||||||||||||| ||||||| |  ||||||||| ||||||||||||    
T  1550141 acaccgctaataatttgaaaaaatcacactattcagtgtaattataggtgtc 1550192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 25892468 - 25892530
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacacc 261  Q
    ||||||||| | ||||| |||||||||||||| || ||||||||||||||| ||||| ||||||    
T  25892468 taataatttaagaaaatgatataattcagtgtaatcataggtgtcgtgtca-gtgtcggacacc 25892530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 10690321 - 10690275
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    ||||||||||||||| ||| ||||||| |||||||||||| ||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattata 10690275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 21257058 - 21257008
Alignment:
Q  177 acaccgacacattgacaccgctaataatttgataaaatcatataattcagt 227  Q
    ||||||||||  |||||| ||||||||||||| ||||||| ||||||||||    
T  21257058 acaccgacacgatgacacagctaataatttgaaaaaatcacataattcagt 21257008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 25652082 - 25652032
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtca 248  Q
    ||||||||||| ||||| ||||||||||||||  |||||||||| ||||||    
T  25652082 taataatttgagaaaatgatataattcagtgtagttataggtgttgtgtca 25652032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 40993432 - 40993341
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaa-tcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||| |||| |||||||| ||||||      | ||||||||||||||||| | |||| ||| |||||||||||| |||||| ||||||    
T  40993432 ctatgaagcacggatacggacacgacacggacacc------tcgacaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcg 40993341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 49505227 - 49505161
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    |||||||||||   || |||||||||||||||| ||||||| |||||| ||||| |||||| |||||    
T  49505227 gacaccgacacgcagagaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 15864841 - 15864890
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||||||||| ||||| |||||||| ||||| || ||||||||||||||    
T  15864841 taataatttgaaaaaatgatataatttagtgtaatcataggtgtcgtgtc 15864890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 16000002 - 15999957
Alignment:
Q  247 cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgc 292  Q
    ||||||||||||||||||||||| ||  |||||| |||||||||||    
T  16000002 cacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgc 15999957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 16192819 - 16192758
Alignment:
Q  180 ccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt 241  Q
    ||||||||  ||||||| ||||||||||| ||||| | |||||||||||| |||||| ||||    
T  16192819 ccgacacaccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgt 16192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 22774149 - 22774076
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||| ||||| | |||||| ||||||||| || ||| ||| ||| |||||||| |||||| ||||||    
T  22774149 gacacagacacagacacgtcgacaccactaataattagacaaagtcacatatttcagtgtaattataagtgtcg 22774076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 25948940 - 25948895
Alignment:
Q  196 gctaataatttgataaaatcatataattcagtgtgattataggtgt 241  Q
    ||||||||||||| ||||||| |||||||||||| |||||| ||||    
T  25948940 gctaataatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 35994796 - 35994740
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||| ||||||||||||| ||||||| |||||||||||| |||| | ||||||||||    
T  35994796 gacacagctaataatttga-aaaatcacataattcagtgtaattacaagtgtcgtgtc 35994740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 4987350 - 4987306
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    ||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  4987350 gacacagctaataatttgaaaaaatcacataattcagtgtaatta 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 11610522 - 11610623
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgt 290  Q
    |||||||||||||||| | ||||||| ||||||||||||  ||| | |||||  ||  ||||||||||| ||||||||| ||  ||  || |||||||||    
T  11610522 acaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgtcaagt--cgtgtccgacatcgggacacgcctaatctgaggagtgtccgt 11610619  T
Q  291 gctt 294  Q
    ||||    
T  11610620 gctt 11610623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 15796345 - 15796309
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgatta 234  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  15796345 taataatttgaaaaaatcatataattcagtgtaatta 15796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 24205123 - 24205043
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    |||||||| ||||| |||||   ||||| | ||||||||||| ||||| | ||||| |||||| |||||| ||||||||||    
T  24205123 cacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtc 24205043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 25064886 - 25064954
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattat 235  Q
    |||||||||||||  |||||   |||||||||||| |||||| ||||||| |||||| ||||| |||||    
T  25064886 cacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaattat 25064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 32804599 - 32804547
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||||| ||||||||||| ||||||| |||||| ||||| |||||| |||||    
T  32804599 gacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 51206413 - 51206373
Alignment:
Q  189 tgacaccgctaataatttgataaaatcatataattcagtgt 229  Q
    |||||| ||||||||||||| ||||||| ||||||||||||    
T  51206413 tgacacagctaataatttgaaaaaatcacataattcagtgt 51206373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 24362283 - 24362209
Alignment:
Q  168 acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    |||||||||||||||||||   ||||||||||||||||||| | ||||| |||||||||||| |||||| |||||    
T  24362283 acgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 34897071 - 34897138
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||| | ||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||    
T  34897071 gacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 12570590 - 12570514
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| |||||||||||||| ||||||| ||||||||||| | |||| || |||||| ||||| |||||| ||||||    
T  12570590 cacgatacagacaccgacacgttgacactgctaataatttaagaaaaacacataattaagtgtaattatatgtgtcg 12570514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 39820406 - 39820486
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||||||||||||||||||  |||| |   ||||||||||| ||||| |||||||| ||||| || ||||||||||||||    
T  39820406 cacgacacagacaccgacacgctgacccgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc 39820486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 24669399 - 24669486
Alignment:
Q  156 acggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| |||| |||||||||||||| |||||  |||||||| |||||||||||  |||| | |||||||||||| |||| | ||||||    
T  24669399 acggacacggacacgacacagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcg 24669486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 3025557 - 3025603
Alignment:
Q  196 gctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaattataggtgtc 3025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 3658133 - 3658203
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgt 246  Q
    ||||||||||||| ||||| | ||||||||||| ||||| || || |||||||| || |||||||||||||    
T  3658133 gacaccgacacatcgacacggataataatttgagaaaataatgtagttcagtgtaatcataggtgtcgtgt 3658203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 11927137 - 11927092
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcg 11927092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 12606888 - 12606835
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||||||||||| |||||||||||||||| ||| |||||| ||||||    
T  12606888 gacactgctaataatttgagaaaatcatataattcaatgtaattatatgtgtcg 12606835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 18067994 - 18067954
Alignment:
Q  189 tgacaccgctaataatttgataaaatcatataattcagtgt 229  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  18067994 tgacaccgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 39954352 - 39954292
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||||||||   ||||||||||||||||||| ||||||| |||||| ||||| ||||||    
T  39954352 gacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattata 39954292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 4673507 - 4673440
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    |||||||||||||| |||||   ||||| | ||||||||||| ||||||||| |||||||||| ||||    
T  4673507 cacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaatta 4673440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 8343293 - 8343360
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    |||||||| ||||||||||||  ||||  ||||||||||||| ||||||| |||||| ||||| ||||    
T  8343293 cacgacactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 4611534 - 4611580
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    ||||||||||||||||||| ||||| | |||||||||||| ||||||    
T  4611534 gacaccgctaataatttgagaaaataacataattcagtgtaattata 4611580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 20679471 - 20679401
Alignment:
Q  173 acagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||| ||||  | |||||| |||||||||||| ||||||| ||| |||||||| |||||| ||||||    
T  20679471 acagacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcg 20679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 25566840 - 25566894
Alignment:
Q  189 tgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||| ||||||||||||| ||||||| |||||||||||| |||| | ||||||    
T  25566840 tgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 25566894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 36934647 - 36934721
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt 241  Q
    |||||||| |||||  |||| | |||||||||||||||| || ||||||| |||||||| ||| |||||| ||||    
T  36934647 cacgacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaattatatgtgt 36934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 11944673 - 11944718
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||||||| |||| ||||||| |||||| ||||||    
T  11944673 taataatttgataaaatcacataactcagtgtaattatatgtgtcg 11944718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 12570808 - 12570747
Alignment:
Q  175 agacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||||||||| ||||||||||||||||||| | |||| |  |||||| ||||| ||||||    
T  12570808 agacaccgacacgttgacaccgctaataatttaagaaaaacgcataattaagtgtaattata 12570747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 13844655 - 13844602
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||||||||||| ||||||| |||||| ||||| |||||| ||||||    
T  13844655 gacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcg 13844602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 31236636 - 31236583
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||||||||||| ||||||| |||||||| ||| |||||| ||||||    
T  31236636 gacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 2572138 - 2572062
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||| || |||||||| | |||||  |||||||||||| ||||||| |||||| ||||| |||| | ||||||    
T  2572138 cacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 2572062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 18069191 - 18069155
Alignment:
Q  189 tgacaccgctaataatttgataaaatcatataattca 225  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  18069191 tgacaccgctaataatttgagaaaatcaaataattca 18069155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 22652057 - 22652101
Alignment:
Q  250 gtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 294  Q
    |||||||||||||||||||||||  ||| || |||||||||||||    
T  22652057 gtgtccgacaccgggacacgtctaatccgaggagtgtccgtgctt 22652101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 263
Target Start/End: Original strand, 22850321 - 22850416
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgg 263  Q
    ||||| ||||||||||||||| | |||||| | ||||||||| ||||  | |||||| | ||| ||||||||| || |||||  |||||||||||||    
T  22850321 cacgaaacagacaccgacacactaacaccgatgataatttgagaaaaagacataattaaatgtaattataggtttcatgtca-atgtccgacaccgg 22850416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 27101515 - 27101566
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||||||||||||||||| ||||||| |||||| ||||  ||||||||||||    
T  27101515 gacaccgctaataatttgaaaaaatcacataatttagtg-aattataggtgtc 27101566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 29775994 - 29776082
Alignment:
Q  148 tatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    ||||||||||| | |||| |||||||| ||||  ||||  | ||||| ||||||||||||| |||||||  ||||||||| | ||||||    
T  29775994 tatgaagcacgaatacggtcacgacacggacattgacaagtcgacactgctaataatttgagaaaatcacgtaattcagtataattata 29776082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 34201123 - 34201059
Alignment:
Q  172 cacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||| ||||||||||||||||   ||||||||||| ||||| | |||||||| ||| ||||||    
T  34201123 cacagataccgacacattgacactaataataatttgagaaaatgacataattcaatgtaattata 34201059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 34222952 - 34223000
Alignment:
Q  195 cgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||| ||||||||| |||||| ||||| |||||| ||||||    
T  34222952 cgctaataatttaataaaatcacataattaagtgtaattatatgtgtcg 34223000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 5468034 - 5467980
Alignment:
Q  193 accgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  5468034 accgataataatttgataaaatcacataattcagtgtaattataggtgtcgtgtc 5467980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 25863181 - 25863262
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtca 248  Q
    ||||||||||||| |||||| | ||||    ||||||||||| ||||| |||||||||||||| |||||| |||||||||||    
T  25863181 cacgacacagacatcgacacgtcgacatgtataataatttgagaaaatgatataattcagtgtaattataagtgtcgtgtca 25863262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 28588733 - 28588680
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||| ||||||||||| ||||||| |||||||||||| |||||||||||||    
T  28588733 gacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcg 28588680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 12927637 - 12927700
Alignment:
Q  173 acagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||||| ||||||  |||| |||||||||||||| |||||||||||||| ||||| ||||||    
T  12927637 acagacacggacacaccgacatcgctaataatttgagaaaatcatataatttagtgtaattata 12927700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 2436878 - 2437025
Alignment:
Q  147 ctatgaagcacggagacggccac--gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgt 244  Q
    |||||||||||||| |||| |||  ||||| ||||| |||||   ||||||||||||||||||  ||||||| |||||||  |||||||||| ||||||     
T  2436878 ctatgaagcacggatacggacaccggacac-gacactgacacgccgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcg- 2436975  T
Q  245 gtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 294  Q
    ||  |||||||||||||  |||||| ||  ||| || ||||| |||||||    
T  2436976 gtgtcgtgtccgacaccaagacacgcctaatccgaggagtgttcgtgctt 2437025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 3966503 - 3966556
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||||||| ||||||| | |||||||||| |||||| ||||||    
T  3966503 gacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcg 3966556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 10022625 - 10022678
Alignment:
Q  183 acacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||| |||| || | |||||||||||||||||||||||||||||| ||||||    
T  10022625 acacatcgacatcgttgataatttgataaaatcatataattcagtgtaattata 10022678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 14574131 - 14574051
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtca 248  Q
    ||||||||| ||||||||||   |||||   |||||||||||| |||| |||||||||||||| ||||||||| ||||||||    
T  14574131 cacgacacaaacaccgacacgccgacacgagtaataatttgatgaaatgatataattcagtgtaattataggt-tcgtgtca 14574051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 23220983 - 23221036
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||||||||||||||| |||||| ||||| || ||| ||||||    
T  23220983 gacaccgctaataatttgataaaatcacataatttagtgttatcatatgtgtcg 23221036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 6471949 - 6471897
Alignment:
Q  189 tgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt 241  Q
    |||||| ||||||||||||| ||||||| |||||||||||| |||||| ||||    
T  6471949 tgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 27144443 - 27144515
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||||||||| |||||   |||||||||||||||||||  |||||| |||||| ||||| |||||| |||||    
T  27144443 gacacagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 30502446 - 30502394
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||||||| |||||||  ||||||||||| |||||| ||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30502394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 30542789 - 30542737
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||||||| |||||||  ||||||||||| |||||| ||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30542737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 39205863 - 39205931
Alignment:
Q  173 acagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt 241  Q
    |||||||| ||||| | ||||| ||||||||||||| ||||||||||||||  |||| |||||| ||||    
T  39205863 acagacacggacacgtcgacactgctaataatttgagaaaatcatataattaggtgtaattatatgtgt 39205931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 39696058 - 39695956
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccg 289  Q
    |||||||  |||||||||| ||||| |||||||| ||||| || ||||||||||||||  |||||||||| ||||||||| ||  ||| || |||||| |    
T  39696058 gacaccgacaataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc-ggtgtccgaca-cgggacacgcctaatcctaggagtgtcgg 39695961  T
Q  290 tgctt 294  Q
    |||||    
T  39695960 tgctt 39695956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 23016073 - 23015995
Alignment:
Q  167 cacgacacagacaccgacacatt--gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||| |||||||||||  |  |||| || |||| |||||| ||||||| |||||||||||| |||||||||||||    
T  23016073 cacgacacggacaccgacactctctgacatcgttaatcatttgagaaaatcacataattcagtgtaattataggtgtcg 23015995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 34879352 - 34879403
Alignment:
Q  192 caccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||| ||||||| |||||||||||||||||||| || ||| ||||||    
T  34879352 caccgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcg 34879403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 42488135 - 42488068
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    |||||||||||||| ||||| | ||||||| | ||||||| ||||||| |||||||||| ||| ||||    
T  42488135 cacgacacagacactgacacgtcgacaccgttgataatttaataaaattatataattcaatgtaatta 42488068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 17593785 - 17593735
Alignment:
Q  186 cattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||| |||||||||||||||| |||||||  ||||||||||| ||||||    
T  17593785 cattgaaaccgctaataatttgagaaaatcacgtaattcagtgtaattata 17593735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 25817493 - 25817547
Alignment:
Q  188 ttgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||||| ||||||||||| | |||||||||| ||||||| |||||||| |||||    
T  25817493 ttgacactgctaataatttaaaaaaatcatatgattcagtatgattatatgtgtc 25817547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 39698527 - 39698585
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    ||||| |||||  |||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  39698527 gacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 39698585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 7175098 - 7175045
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataatt 223  Q
    ||||| ||||| ||||||| ||||||| ||||||||||| ||||||| ||||||    
T  7175098 gacacggacactgacacatcgacaccgttaataatttgagaaaatcacataatt 7175045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 7997217 - 7997168
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||||||||| ||||| ||||||| |||||| |||||| ||||||||||    
T  7997217 taataatttgagaaaatgatataatacagtgtaattataagtgtcgtgtc 7997168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 19438329 - 19438382
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgt 229  Q
    ||||| ||||||| |||| |||| ||||||||| ||||||| ||||||||||||    
T  19438329 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgt 19438382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 21191115 - 21191062
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||||||||||| ||||||| |||||||||||| |||| | ||||||    
T  21191115 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21191062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 32630795 - 32630742
Alignment:
Q  189 tgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    |||||||| ||||||||||| ||||| |||||||||| ||| |||||| |||||    
T  32630795 tgacaccgataataatttgagaaaattatataattcaatgtaattatatgtgtc 32630742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 41091316 - 41091263
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| |||||| |||||| ||||||| |||||||||||| |||||| ||||||    
T  41091316 gacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcg 41091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 43554529 - 43554578
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||||||||| ||||| |||||||| ||||| || ||||||||||||||    
T  43554529 taataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc 43554578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 19168900 - 19168828
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||| ||||| ||||||   ||||||||| |||||||||||||||| || ||||||||| || ||| |||||    
T  19168900 gacacggacactgacacacctacaccgctattaatttgataaaatcacattattcagtgtaatcatatgtgtc 19168828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 21576803 - 21576751
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||| ||||||||||||| ||||||| |||||||||||| |||| | ||||||    
T  21576803 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 27932235 - 27932279
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    ||||||||||||||||||| ||||| | |||||||||||| ||||    
T  27932235 gacaccgctaataatttgagaaaattacataattcagtgtaatta 27932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 36838544 - 36838596
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||||||| ||||| | |||||| ||||| |||||| ||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcg 36838596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 268
Target Start/End: Complemental strand, 38464416 - 38464344
Alignment:
Q  197 ctaataatttgataaaatcatataattcagtgtgattataggtgtc-gtgtcacgtgtccgacaccgggacac 268  Q
    |||||||||||| ||||||| || ||||| ||  |||||| ||||| ||| ||| ||||||||||||||||||    
T  38464416 ctaataatttgagaaaatcacattattcattgaaattataagtgtcagtggcacatgtccgacaccgggacac 38464344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 34691861 - 34691811
Alignment:
Q  193 accgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  34691861 accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcg 34691811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 34714273 - 34714223
Alignment:
Q  193 accgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  34714273 accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcg 34714223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 37411303 - 37411250
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  37411303 gacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 12941017 - 12940950
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    |||||||| ||||| ||||| |||||||  |||||||||||| |||||||||||||||||||| ||||    
T  12941017 cacgacacggacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaatta 12940950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 21616739 - 21616813
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgt 241  Q
    |||||||| ||||| |||||   ||||||||||||||||||| ||||||| |||||||||||| |||||| ||||    
T  21616739 cacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 23718006 - 23718079
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||| ||||||  ||||||||||||||||||| ||| ||| |||||||||||| |||||| ||||||    
T  23718006 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 24105678 - 24105751
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||| ||||||  ||||||||||||||||||| ||| ||| |||||||||||| |||||| ||||||    
T  24105678 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 20539756 - 20539680
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||| ||||| ||||| | ||||| ||||||||||||| |||||||||||||| ||||| |||| | ||||||    
T  20539756 cacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 20539680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 30404952 - 30404856
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||| |||| || ||||| ||||| |||||   ||||| | ||||||||||| ||||||| |||||||||||| |||| | ||||||    
T  30404952 ctatgaagcacggatacggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 27286394 - 27286299
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    |||||||||||||| || | ||||| || ||||| || ||   |||| ||||||||||||||||| |||| |||||| ||||| ||||||||||||    
T  27286394 ctatgaagcacggacacagacacgatacggacactgatacgccgacaacgctaataatttgataagatcacataattaagtgtaattataggtgtc 27286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 29970622 - 29970555
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||||||||||||||||||||||||| ||||||  ||| |||||||| || ||| ||||||    
T  29970622 gacactgacacattgacaccgctaataatttgagaaaatcgcatagttcagtgtaatcatatgtgtcg 29970555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 28677909 - 28677955
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  28677909 gacaccgctaataatttgaaaaaatcacataattcagtgtaattata 28677955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 31808063 - 31808129
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||| ||||||  ||||||||||||||||| | ||||||| |||||||||||| |||||| |||||    
T  31808063 gacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtc 31808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 44860319 - 44860373
Alignment:
Q  189 tgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||||||||| ||||||  |||||||||||| |||||| ||||||    
T  44860319 tgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcg 44860373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 23354731 - 23354654
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||| ||||||||||   |||||| | ||||||||||| ||||| |||||||| ||||| || ||||||||||||||    
T  23354731 gacacggacaccgacatgctgacacagataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtc 23354654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 25544489 - 25544538
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||||||||| ||||| |||||||||||||| || ||||||||||||||    
T  25544489 taataatttgagaaaatgatataattcagtgtaatcataggtgtcgtgtc 25544538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 42832335 - 42832237
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccg 289  Q
    ||||||||||||||||||| ||||| | ||| |||||||| |||||| ||||||      ||||||||| |||||||||| ||  |||||| |||||||     
T  42832335 gacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcg------gtgtccgactccgggacacgcctaatccaaggagtgtcct 42832242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 21782900 - 21782832
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattat 235  Q
    ||||||||| |||| |||||   ||||| ||||||||||||| ||||||| |||||||||||| |||||    
T  21782900 cacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 28412351 - 28412395
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattat 235  Q
    |||||| ||||||||||||||||||| |||||||||||| |||||    
T  28412351 acaccgttaataatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 22084899 - 22084852
Alignment:
Q  182 gacacattgacaccgctaataatttgataaaatcatataattcagtgt 229  Q
    |||||||  |||||| ||||||||||| ||||||||||||||||||||    
T  22084899 gacacatcaacaccgttaataatttgagaaaatcatataattcagtgt 22084852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 24975384 - 24975345
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgt 229  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  24975384 gacaccgctaataatttgagaaaatcgtataattcagtgt 24975345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 36756425 - 36756350
Alignment:
Q  168 acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||| ||||| | |||||  ||||||||||||  |||| | |||||||||||| |||||| ||||||    
T  36756425 acgacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcg 36756350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 268
Target Start/End: Original strand, 18622613 - 18622690
Alignment:
Q  197 ctaataatttgataaaatcatataattcagtgtgattata------ggtgtcgtgtcacgtgtccgacaccgggacac 268  Q
    |||||||||| ||||||||| |||||||||||| ||||||      ||||||||||||  ||||| ||||||||||||    
T  18622613 ctaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgtcatatgtcctacaccgggacac 18622690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 1327978 - 1328015
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagt 227  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  1327978 gacaccgctaataatttgagaaaatcataaaattcagt 1328015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 16069313 - 16069268
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattat 235  Q
    ||||||| ||||||||| | |||||||||||||||||||| |||||    
T  16069313 gacaccgttaataatttaaaaaaatcatataattcagtgtaattat 16069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 18276521 - 18276566
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattat 235  Q
    ||||||||||||||||||| |||||||  ||||||||||| |||||    
T  18276521 gacaccgctaataatttgagaaaatcacttaattcagtgtaattat 18276566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 19573978 - 19574035
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtc 247  Q
    ||||||| ||||||||| | ||||| | |||||||||||| |||||||||| ||||||    
T  19573978 gacaccgataataatttaagaaaataacataattcagtgtaattataggtggcgtgtc 19574035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 23058432 - 23058387
Alignment:
Q  251 tgtccgacaccgggacacgtctcgtccaagaagtgtccgtgcttac 296  Q
    ||||||||||||||||||| ||  ||| ||||||||||||||||||    
T  23058432 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttac 23058387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 30527646 - 30527601
Alignment:
Q  198 taataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||| |||||||||||||| ||||| |||||| ||||||    
T  30527646 taataatttgagaaaatcatataatttagtgtaattatatgtgtcg 30527601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 4882774 - 4882702
Alignment:
Q  171 acacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||| || ||||| | || ||||||||| |||||| ||||| |||||||||||||| |||| | ||||||    
T  4882774 acacagatactgacacgtcgataccgctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcg 4882702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 6045972 - 6045940
Alignment:
Q  193 accgctaataatttgataaaatcatataattca 225  Q
    |||||||||||||||||||||||||| ||||||    
T  6045972 accgctaataatttgataaaatcatacaattca 6045940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 8950374 - 8950338
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcag 226  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  8950374 gacaccgctaataatttgaaaaaatcttataattcag 8950338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 10535818 - 10535762
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgt 246  Q
    ||||||| ||||||||||| ||||| | |||||||||||| || ||| |||||||||    
T  10535818 gacaccgataataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgt 10535762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 18841115 - 18841019
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||| | |||| |||||||  ||||| |||||  ||||||  |||||||||||| ||||| | |||||| ||||| |||| | ||||||    
T  18841115 ctatgaagcacgtatacggacacgacatggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcg 18841019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 25080902 - 25080946
Alignment:
Q  192 caccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||||||||||||||||| |||| |||| ||||||| ||||||    
T  25080902 caccgctaataatttgataagatcacataagtcagtgtaattata 25080946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 31018591 - 31018643
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||||| | ||||||| || ||| ||||| |||||||||||||    
T  31018591 acaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcg 31018643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 38355933 - 38355893
Alignment:
Q  203 atttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||| ||||||| ||||||||||||||||||| ||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcg 38355893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 39279676 - 39279728
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||| ||||||| ||| ||||||| |||||||||||| |||||| ||||||    
T  39279676 acaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtgtcg 39279728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 39323264 - 39323308
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    ||||||||||||||||||| ||||| | |||||||||||| ||||    
T  39323264 gacaccgctaataatttgacaaaattacataattcagtgtaatta 39323308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 37203264 - 37203366
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgtccg 289  Q
    ||||| ||||||||||||| ||||| | |||||| ||||| |||| | |||| |||||  | |||||||||||||||||||||  ||| |||||||||||    
T  37203264 gacacggctaataatttgaaaaaatgacataatttagtgtaattacaagtgtagtgtc--gggtccgacaccgggacacgtctaatccgagaagtgtccg 37203361  T
Q  290 tgctt 294  Q
    |||||    
T  37203362 tgctt 37203366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 247
Target Start/End: Complemental strand, 22440702 - 22440602
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgt 246  Q
    ||||||| |||||| || | |||||||  ||||| || |||| ||||||| ||||||||||| ||||||| |||||||||||| |||||| ||| |||||    
T  22440702 ctatgaaacacggatacagacacgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtgacgtgt 22440603  T
Q  247 c 247  Q
    |    
T  22440602 c 22440602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 24343484 - 24343578
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccgacaccg 262  Q
    |||||||| ||| |||||||   ||||| | ||||||||||| ||||| | |||||||||||| |||||||||||||||||  |||||||||||||    
T  24343484 cacgacacggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcgtgtc-ggtgtccgacaccg 24343578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 3712568 - 3712458
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc--gtgtc----acgtgtccgacaccgggacacgtctcgtccaagaag 283  Q
    ||||||||||||||||||| |||||||| ||||||| ||| |||||| |||||  |||||    |||||||||||||||||||||| ||  ||  || ||    
T  3712568 gacaccgctaataatttgagaaaatcatgtaattcaatgtaattatatgtgtctggtgtcgtagacgtgtccgacaccgggacacggctaatctgaggag 3712469  T
Q  284 tgtccgtgctt 294  Q
    |||||||||||    
T  3712468 tgtccgtgctt 3712458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 56488583 - 56488533
Alignment:
Q  176 gacaccgacacattgacaccgctaataatttgataaaatcatataattcag 226  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  56488583 gacaccgacacgttgacaccgctaacaatttgagaaaatcatataattcag 56488533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 14126193 - 14126104
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgtcacgtgtccg 256  Q
    ||||||||||||||  ||||   ||||| | ||||||||||||||| ||| |||||||||||| |||||| ||||| |||| ||||||||    
T  14126193 cacgacacagacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtcatgtctcgtgtccg 14126104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 35952670 - 35952588
Alignment:
Q  196 gctaataatttgataaaatcatataattcagtgtgattata------ggtgtcgtgtcacgtgtccgacaccgggacacgtct 272  Q
    |||||||||||||||||||||||||||||| ||| ||||||       |||||||||| |||||||||||||  |||||||||    
T  35952670 gctaataatttgataaaatcatataattcaatgtaattatatgtatcagtgtcgtgtcgcgtgtccgacaccaagacacgtct 35952588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 7012025 - 7012115
Alignment:
Q  149 atgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggt 239  Q
    ||||||||| || || | || ||||| |||||||||||   ||||||| ||||||||||| ||||| | ||||||||||||||| ||||||    
T  7012025 atgaagcacagacacagacaggacacggacaccgacacgccgacaccgataataatttgagaaaatgacataattcagtgtgatcataggt 7012115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 8423777 - 8423731
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  8423777 gacaccgctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 56257928 - 56257978
Alignment:
Q  185 acattgacaccgctaataatttgataaaatcatataattcagtgtgattat 235  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||| |||||    
T  56257928 acatggacactgctaataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 40613450 - 40613503
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||||||||||| ||||| ||||||| |||||||||||| |||||| ||||||    
T  40613450 gacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcg 40613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 35160982 - 35161017
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatt 205  Q
    ||||| ||||||||||||||||||||||||||||||    
T  35160982 gacacggacaccgacacattgacaccgctaataatt 35161017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 36635325 - 36635375
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgt 241  Q
    ||||| |||||||||||| ||||||| |||||||||||| |||||| ||||    
T  36635325 acaccactaataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 40179715 - 40179649
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    ||||| ||||| ||||| ||||||||  ||||| ||||| ||||||| |||||||||||| ||||||    
T  40179715 gacacggacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattata 40179649  T

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Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 54580075 - 54580029
Alignment:
Q  197 ctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||| ||||||| |||||||||||| |||||| ||||||    
T  54580075 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcg 54580029  T

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Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 999407 - 999354
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||| ||||||||||||||  ||||||||||||| ||||| |||||| ||||||    
T  999407 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 19230381 - 19230312
Alignment:
Q  177 acaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgtgt 246  Q
    |||| ||||||| ||||  | ||||||||||| ||||| | |||||||| ||| ||||||||||||||||    
T  19230381 acactgacacatggacatagataataatttgagaaaataacataattcaatgtaattataggtgtcgtgt 19230312  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 21945459 - 21945556
Alignment:
Q  147 ctatgaagcacggagac-ggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||| || || || ||||||||||| ||||    ||||| ||||||||||||| ||||| | |||||||||||| |||| | ||||||    
T  21945459 ctatgaagcacggacaccggacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 21945556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 26504378 - 26504305
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| ||||| || |||| ||||| ||||||||||| | ||||||| ||| |||||||| |||||| ||||||    
T  26504378 gacacggacactgaaacatcgacactgctaataatttaagaaaatcaaatagttcagtgtaattatatgtgtcg 26504305  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 28964312 - 28964263
Alignment:
Q  185 acattgacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    |||||||||  ||||||||||||| ||||||| |||||||||||| ||||    
T  28964312 acattgacatagctaataatttgaaaaaatcacataattcagtgtaatta 28964263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 49430982 - 49431079
Alignment:
Q  147 ctatgaagcacggagacggccacgacacagacaccgacacattgacaccgctaataatttg-ataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||||| |||| |||||| | ||||  |||||   ||||| |||||||||||| | ||||||| |||||||||||| |||| | ||||||    
T  49430982 ctatgaagcacggacacggacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcg 49431079  T

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Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 903924 - 903968
Alignment:
Q  192 caccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    ||||| ||||||||||| ||||||| |||||||||||| ||||||    
T  903924 caccgttaataatttgagaaaatcacataattcagtgtaattata 903968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 16189710 - 16189754
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattat 235  Q
    |||||||||| ||||||| ||||||| |||||||||||| |||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattat 16189754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 21873359 - 21873315
Alignment:
Q  242 cgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgt 286  Q
    |||| ||||||||||||||||||||||||||  |||||| |||||    
T  21873359 cgtgacacgtgtccgacaccgggacacgtctaatccaaggagtgt 21873315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 21929220 - 21929176
Alignment:
Q  242 cgtgtcacgtgtccgacaccgggacacgtctcgtccaagaagtgt 286  Q
    |||| ||||||||||||||||||||||||||  |||||| |||||    
T  21929220 cgtgacacgtgtccgacaccgggacacgtctaatccaaggagtgt 21929176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 29205445 - 29205497
Alignment:
Q  191 acaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||| ||||||||||||| ||||||| |||||||||||| |||| | ||||||    
T  29205445 acacggctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 29205497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 30838216 - 30838256
Alignment:
Q  196 gctaataatttgataaaatcatataattcagtgtgattata 236  Q
    ||||||||||||||||||| |||||||| ||||| ||||||    
T  30838216 gctaataatttgataaaattatataatttagtgtaattata 30838256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 38847071 - 38847027
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    ||||| ||||||||||||| |||||||||| ||||||||| ||||    
T  38847071 gacacagctaataatttgaaaaaatcatattattcagtgtaatta 38847027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 90820 - 90889
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattata 236  Q
    |||||||||||||| ||||||   |||||  ||||||||||| |||||||||||||||||||| ||||||    
T  90820 cacgacacagacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaattata 90889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 1013 - 1087
Alignment:
Q  168 acgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||||||||| | ||||||  ||||||||||||||||||| ||||| | |||||||||||| | |||| |||||    
T  1013 acgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc 1087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 44585 - 44531
Alignment:
Q  189 tgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||||| ||||||| ||||||| |||||||||||| |||||| ||||||    
T  44585 tgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 44531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 53258 - 53303
Alignment:
Q  247 cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgc 292  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||    
T  53258 cacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgc 53303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 53183 - 53233
Alignment:
Q  193 accgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    ||||| |||||||||| ||||||| |||||||||||| |||||| ||||||    
T  53183 accgccaataatttgagaaaatcacataattcagtgtaattataagtgtcg 53233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 68309 - 68249
Alignment:
Q  182 gacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtc 242  Q
    ||||||||  ||||| ||||||||||| |||||||||||||| ||| | ||||||||||||    
T  68309 gacacattagcaccgttaataatttgagaaaatcatataatttagtataattataggtgtc 68249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 241672 - 241719
Alignment:
Q  247 cacgtgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 294  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||||||    
T  241672 cacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgctt 241719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 241550 - 241639
Alignment:
Q  147 ctatgaagcacggagac-ggccacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattat 235  Q
    |||||||||||||| || || |||||||| ||||| |||||   ||||| ||||||||||||  ||||||| |||||| ||||| |||||    
T  241550 ctatgaagcacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattat 241639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 26373 - 26447
Alignment:
Q  170 gacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcgt 244  Q
    ||||||||||  ||||| | |||||| |||||||||||| ||||||| |||||||| |||  ||||| |||||||    
T  26373 gacacagacagtgacacgtcgacaccactaataatttgagaaaatcacataattcaatgtcgttatatgtgtcgt 26447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 70238 - 70331
Alignment:
Q  151 gaagcacggagacggccacga-cacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||||| |||| ||| | ||||||||| ||||  | ||||| | ||||||||||| ||||| | |||||||||||| |||||| ||||||    
T  70238 gaagcacggatacggacacaaacacagacacagacatgtcgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcg 70331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 20172 - 20216
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    ||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  20172 gacacagctaataatttgaaaaaatcacataattcagtgtaatta 20216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 51811 - 51855
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    ||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  51811 gacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 8775 - 8851
Alignment:
Q  167 cacgacacagacaccgacacattgacaccgctaataatttgataaaatcatataattcagtgtgattataggtgtcg 243  Q
    |||||||| ||||| |||||   ||||| ||||||||||||| |||||||||| ||| ||||| |||| | ||||||    
T  8775 cacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcg 8851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 92807 - 92851
Alignment:
Q  190 gacaccgctaataatttgataaaatcatataattcagtgtgatta 234  Q
    ||||||||||||||||||| ||||| | |||||||||||| ||||    
T  92807 gacaccgctaataatttgagaaaattacataattcagtgtaatta 92851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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